Citrus Sinensis ID: 019414

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-
Protein Sequence
MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Secondary Structure (PSIPRED)
ccEEEEEcccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEccccccccccccccccccccccccccccccccccccEEEEccEEEEEEEccccccccEEEEccEEEEEcccccccEEEEEccccccccccEEEEcccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHccccEEEccccccccHHHHHHHHccccccEEEEccccHHHHHHHHHHHHcccEEEEEEEccccccEEEccccccccccEEEEEEcccccccccHHHHHHHHHcccccccccEEccccHHHHHHHHHHHHccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEccccEEEEccccccccEccccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccccccccccccccccccEEEccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHHHccccHHHHHHHHccccEcEEEEccccHHHHHHHHHcEcccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHccccccHHHEEEEEEHHHcHHHHHHHHHccccEEEEEccc
Coil and Loop (DISEMBL)
mlsqkhnsfnprnfvfgfqgqtplfprifgheaagvvesvgegvsdlevgdhvlpvftgecgdcrhcrsdvsnmcdllrinpvrgvmladgqsrfsingepvnhflgtstFSEYTVVHsgcvakinplapldkvcilscgvstglgatlnvakpergssvavFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKfgvtdfvntsehdrPIQEVIAEMTnggvdrsvectgnIDNMISAFECVHDGWGVAVLVgvpskdavfmtkpinvlnertlkgtffgnykprtdlpsVVDMYMNKQLELEKFithripfseINKAFEYMVKGEGLRCIISMED
Flexible Loop (DISEMBL)
mlsqkhnsfnprnFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAegariagasriigvdrsskrFEEAkkfgvtdfvntsehdrpIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMtkpinvlnertlkgtffgnykprtdlPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Low Complexity Region (SEG)
MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHeaagvvesvgegvsdlevgdHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERgssvavfglgavglaaaegariagasriigVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Disordered region (IsUnstruct)
***********RNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS**RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII****
Disordered Region (DISOPRED)
MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME*
Disordered Region (DISEMBL)
MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Disordered Region (DISPRO)
MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	341	2.2.26 [Sep-21-2011]
P48977	380	Alcohol dehydrogenase OS=	N/A	no	0.961	0.863	0.789	1e-157
P14674	380	Alcohol dehydrogenase 2 O	N/A	no	0.961	0.863	0.792	1e-157
P14675	380	Alcohol dehydrogenase 3 O	N/A	no	0.961	0.863	0.792	1e-157
P14673	380	Alcohol dehydrogenase 1 O	N/A	no	0.961	0.863	0.792	1e-157
P28032	380	Alcohol dehydrogenase 2 O	N/A	no	0.961	0.863	0.786	1e-156
P17648	380	Alcohol dehydrogenase OS=	N/A	no	0.961	0.863	0.771	1e-155
P06525	379	Alcohol dehydrogenase cla	yes	no	0.956	0.860	0.782	1e-154
Q2R8Z5	379	Alcohol dehydrogenase 1 O	yes	no	0.961	0.865	0.768	1e-153
Q75ZX4	379	Alcohol dehydrogenase 1 O	N/A	no	0.961	0.865	0.768	1e-153
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.958	0.856	0.768	1e-153

>sp|P48977|ADH_MALDO Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1

 Score =  556 bits (1432), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 259/328 (78%), Positives = 297/328 (90%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQ PLFPRI+GHEA G+VESVGEGV+DL+ GDHVLPVFTGEC DC HC+S+ SN
Sbjct: 53  YFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESN 112

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RGVML+DG+SRFSI G+P+ HF+GTSTFSEYTVVH GC+AKINP APLDK
Sbjct: 113 MCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDK 172

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP++GS+VAVFGLGAVGLAAAEGAR++GASRIIGVD  S R
Sbjct: 173 VCLLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDR 232

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FEEAKKFGVT+FVN   H++P+QEVIAE+TN GVDRS+ECTG+ + MISAFECVHDGWGV
Sbjct: 233 FEEAKKFGVTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGV 292

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP KDAVF T P+N LNERTLKGTFFGNYK RTD+PSVV+ YMNK+LELEKFITH
Sbjct: 293 AVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITH 352

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
           ++PFSEINKAFEYM+KGEGLRCII ME+
Sbjct: 353 KVPFSEINKAFEYMLKGEGLRCIIRMEE 380

Malus domestica (taxid: 3750)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1

 Score =  555 bits (1429), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 260/328 (79%), Positives = 298/328 (90%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQ P+FPRI GHEAAG+VESVGEGV++L  GDHVLPVFTGEC DC HC+S+ SN
Sbjct: 53  YFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESN 112

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MC LLRIN  RGVM+ DGQSRFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDK
Sbjct: 113 MCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDK 172

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ R
Sbjct: 173 VCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASR 232

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FE+AKKFGVT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGV
Sbjct: 233 FEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGV 292

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP K+AVF T P+N LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH
Sbjct: 293 AVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITH 352

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
            +PF+EINKAF+ M+KGEGLRCII+MED
Sbjct: 353 TLPFAEINKAFDLMLKGEGLRCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1

 Score =  555 bits (1429), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 260/328 (79%), Positives = 298/328 (90%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQ P+FPRI GHEAAG+VESVGEGV++L  GDHVLPVFTGEC DC HC+S+ SN
Sbjct: 53  YFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESN 112

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MC LLRIN  RGVM+ DGQSRFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDK
Sbjct: 113 MCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDK 172

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ R
Sbjct: 173 VCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASR 232

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FE+AKKFGVT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGV
Sbjct: 233 FEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGV 292

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP K+AVF T P+N LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH
Sbjct: 293 AVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITH 352

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
            +PF+EINKAF+ M+KGEGLRCII+MED
Sbjct: 353 TLPFAEINKAFDLMLKGEGLRCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1

 Score =  554 bits (1428), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 260/328 (79%), Positives = 299/328 (91%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQ P+FPRI GHEAAG+VESVGEGV++L  GDHVLPVFTGEC DC HC+S+ SN
Sbjct: 53  YFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESN 112

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MC LLRIN  RGVM+ DGQSRFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDK
Sbjct: 113 MCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDK 172

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ R
Sbjct: 173 VCVLSCGISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASR 232

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FE+AKKFGVT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGV
Sbjct: 233 FEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGV 292

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP K+AVF T P+N+LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH
Sbjct: 293 AVLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITH 352

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
            +PF+EINKAF+ M+KGEGLRCII+MED
Sbjct: 353 TLPFAEINKAFDLMLKGEGLRCIITMED 380

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P28032|ADH2_SOLLC Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2

 Score =  549 bits (1415), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 258/328 (78%), Positives = 295/328 (89%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQ P+FPRI GHEAAG+VESVGEGV+DL  GDHVLPVFTGEC DC HC+S+ SN
Sbjct: 53  YFWEAKGQNPVFPRILGHEAAGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESN 112

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MC LLRIN  RGVML DG+SRFSING P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDK
Sbjct: 113 MCSLLRINTDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDK 172

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGA+LNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ R
Sbjct: 173 VCVLSCGISTGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASR 232

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FE+AKKFGVT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGV
Sbjct: 233 FEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGV 292

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP K+AVF T P+N LNERTLKGTFFGNYKPR+D+P VV+ YMNK+LELEKFITH
Sbjct: 293 AVLVGVPHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITH 352

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
            +PF+EINKAF+ M+KGEGLRCII+M D
Sbjct: 353 TLPFAEINKAFDLMLKGEGLRCIITMAD 380

Solanum lycopersicum (taxid: 4081)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P17648|ADH_FRAAN Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2

 Score =  547 bits (1409), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 253/328 (77%), Positives = 296/328 (90%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQ PLFPRI+GHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +C HC+S+ SN
Sbjct: 53  YFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKECDHCKSEESN 112

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RGVML DG+SRFSI G+P+ HF+GTSTFS YTV H GC+AKINP +PLDK
Sbjct: 113 MCDLLRINTDRGVMLNDGKSRFSIKGKPIYHFVGTSTFSVYTVTHVGCLAKINPQSPLDK 172

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VCILSCG+STGLGATLNV KP++GS+VAVFGLGAVGLAAAEGAR+AGASRIIGVD +S R
Sbjct: 173 VCILSCGISTGLGATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNR 232

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FEEAKKFG+T+FVN  +H +P+QEVIAE+TNGGVDRS+ECTGNI  MI AFECVHDGWGV
Sbjct: 233 FEEAKKFGITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGV 292

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP KDAVF T P+N LNERTLKGTFFGNYKPRTD+PSVV+ YMNK+LE++KFITH
Sbjct: 293 AVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITH 352

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
           ++PFS+INKAF+YM+KGEG+RCII+ME+
Sbjct: 353 QLPFSQINKAFDYMLKGEGIRCIITMEE 380

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Fragaria ananassa (taxid: 3747)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P06525|ADH1_ARATH Alcohol dehydrogenase class-P OS=Arabidopsis thaliana GN=ADH1 PE=1 SV=2

 Score =  543 bits (1399), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 255/326 (78%), Positives = 294/326 (90%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQTPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLP+FTGECG+CRHC S+ SN
Sbjct: 52  YFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESN 111

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RG M+ DG+SRFSING+P+ HFLGTSTFSEYTVVHSG VAKINP APLDK
Sbjct: 112 MCDLLRINTERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDK 171

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VCI+SCG+STGLGATLNVAKP++G SVA+FGLGAVGL AAEGARIAGASRIIGVD +SKR
Sbjct: 172 VCIVSCGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKR 231

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           F++AK+FGVT+ VN  +HD+PIQ+VIAEMT+GGVDRSVECTG++  MI AFECVHDGWGV
Sbjct: 232 FDQAKEFGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGV 291

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVPSKD  F T P+N LNERTLKGTFFGNYKP+TD+P VV+ YMNK+LELEKFITH
Sbjct: 292 AVLVGVPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITH 351

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISM 339
            +PFSEINKAF+YM+KGE +RCII+M
Sbjct: 352 TVPFSEINKAFDYMLKGESIRCIITM 377

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q2R8Z5|ADH1_ORYSJ Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2

 Score =  542 bits (1397), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 252/328 (76%), Positives = 293/328 (89%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQTP+FPRIFGHEA G+VESVGEGV+DL  GDHVLPVFTGEC +C HC+S  SN
Sbjct: 52  YFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESN 111

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDK
Sbjct: 112 MCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDK 171

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGAT+NVAKP +GS+VA+FGLGAVGLAAAEGARIAGASRIIG+D ++ R
Sbjct: 172 VCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANR 231

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FEEA+KFG T+FVN  +HD+P+Q+V+AEMTNGGVDRSVECTGNI+ MI AFECVHDGWGV
Sbjct: 232 FEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGV 291

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP KDA F T P+N LNERTLKGTFFGNYKPRTDLP+VV++YM K+LE+EKFITH
Sbjct: 292 AVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITH 351

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
            +PFSEIN AF+ M KGEG+RCII ME+
Sbjct: 352 SVPFSEINTAFDLMHKGEGIRCIIRMEN 379

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q75ZX4|ADH1_ORYSI Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1

 Score =  542 bits (1397), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 252/328 (76%), Positives = 293/328 (89%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQTP+FPRIFGHEA G+VESVGEGV+DL  GDHVLPVFTGEC +C HC+S  SN
Sbjct: 52  YFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESN 111

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDK
Sbjct: 112 MCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDK 171

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGAT+NVAKP +GS+VA+FGLGAVGLAAAEGARIAGASRIIG+D ++ R
Sbjct: 172 VCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANR 231

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FEEA+KFG T+FVN  +HD+P+Q+V+AEMTNGGVDRSVECTGNI+ MI AFECVHDGWGV
Sbjct: 232 FEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGV 291

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP KDA F T P+N LNERTLKGTFFGNYKPRTDLP+VV++YM K+LE+EKFITH
Sbjct: 292 AVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITH 351

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
            +PFSEIN AF+ M KGEG+RCII ME+
Sbjct: 352 SVPFSEINTAFDLMHKGEGIRCIIRMEN 379

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  542 bits (1397), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 252/328 (76%), Positives = 296/328 (90%), Gaps = 1/328 (0%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQTPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC  CRHC+S+ SN
Sbjct: 54  YFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESN 113

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RGVM+ DGQ+RFS +G+P+ HF+GTSTFSEYTV HSGCV KI+P APLDK
Sbjct: 114 MCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDK 173

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP +GS+VA+FGLGAVGLAAAEGARIAGASRIIGVD +  R
Sbjct: 174 VCVLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSR 233

Query: 194 FEEAKKFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG 252
           F +AKKFGVT+FVN  +H D+P+Q+VIAEMT+GGVDRSVECTGN++ MISAFECVHDGWG
Sbjct: 234 FNDAKKFGVTEFVNPKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWG 293

Query: 253 VAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 312
           VAVLVGVP+KD  F T P+N+LNERTLKGTFFGNYKP++D+PSVVD YM K+LELEKFIT
Sbjct: 294 VAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFIT 353

Query: 313 HRIPFSEINKAFEYMVKGEGLRCIISME 340
           H++PFSEINKAF+YM+KGE +RC+I+ME
Sbjct: 354 HQVPFSEINKAFDYMLKGESIRCMITME 381

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
342851409	326	alcohol dehydrogenase, partial [Pyrus co	0.938	0.981	0.85	1e-163
2641344	330	alcohol dehydrogenase [Pyrus communis]	0.947	0.978	0.842	1e-162
342851415	326	alcohol dehydrogenase, partial [Pyrus us	0.938	0.981	0.846	1e-162
342851413	326	alcohol dehydrogenase, partial [Pyrus us	0.938	0.981	0.846	1e-161
342851411	326	alcohol dehydrogenase, partial [Pyrus co	0.938	0.981	0.840	1e-160
255587152	380	alcohol dehydrogenase, putative [Ricinus	0.961	0.863	0.807	1e-157
342851379	330	alcohol dehydrogenase, partial [Pyrus py	0.961	0.993	0.792	1e-157
359477028	415	PREDICTED: alcohol dehydrogenase 1 [Viti	0.958	0.787	0.795	1e-157
224093368	380	predicted protein [Populus trichocarpa]	0.956	0.857	0.809	1e-157
356508983	381	PREDICTED: alcohol dehydrogenase-like [G	0.961	0.860	0.804	1e-157

>gi|342851409|gb|AEL75219.1| alcohol dehydrogenase, partial [Pyrus communis]

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 272/320 (85%), Positives = 304/320 (95%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           +GQTPLFPRIFGHEA+G+VESVGEGV  LEVGD+VLPVFTGECGDC HC+S+ SNMCDLL
Sbjct: 7   KGQTPLFPRIFGHEASGIVESVGEGVEGLEVGDYVLPVFTGECGDCAHCKSEESNMCDLL 66

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
           RIN  RGVML+DG++RFSING P+NHFLGTSTFSEYTV+HSGC+AKINPLAPLD VCILS
Sbjct: 67  RINTDRGVMLSDGKTRFSINGTPINHFLGTSTFSEYTVIHSGCLAKINPLAPLDIVCILS 126

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
           CG+STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARI+GASRIIGVDR+ KRFEEAK
Sbjct: 127 CGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARISGASRIIGVDRNPKRFEEAK 186

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
           KFGV +FVN  +HD+P+QEVIAEMTNGG DRS+ECTGNI+ MISAFECVHDGWGVAVLVG
Sbjct: 187 KFGVNEFVNPKDHDKPVQEVIAEMTNGGADRSIECTGNINAMISAFECVHDGWGVAVLVG 246

Query: 259 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318
           VP+KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLP VV+MYM+K+LE+EKFITHR+PFS
Sbjct: 247 VPNKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPLVVEMYMSKKLEVEKFITHRVPFS 306

Query: 319 EINKAFEYMVKGEGLRCIIS 338
           EINKAF+YM KGEGLRCI+S
Sbjct: 307 EINKAFDYMTKGEGLRCIVS 326

Source: Pyrus communis

Species: Pyrus communis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2641344|gb|AAB86868.1| alcohol dehydrogenase [Pyrus communis]

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 272/323 (84%), Positives = 303/323 (93%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           +GQTPLFPRIFGHEA+G+VESVGEGV  LEVGDHVLPVFTGECGDC HC+ + SNMCDLL
Sbjct: 8   KGQTPLFPRIFGHEASGIVESVGEGVEGLEVGDHVLPVFTGECGDCAHCKFEESNMCDLL 67

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
           RIN  RGVML+DG++RFSING P+NHFLGTSTFSEYTV+HSGC+AK NPLAPLD VCILS
Sbjct: 68  RINTDRGVMLSDGKTRFSINGTPINHFLGTSTFSEYTVIHSGCLAKTNPLAPLDIVCILS 127

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
           CG+STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARI GASRIIGVDR+ KRFEEAK
Sbjct: 128 CGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARICGASRIIGVDRNPKRFEEAK 187

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
           KFGV +FVN  +HD+P+QEVIAEMTNGG DRS+ECTG I+ MISAFECVHDGWGVAVLVG
Sbjct: 188 KFGVNEFVNPKDHDKPVQEVIAEMTNGGADRSIECTGYINAMISAFECVHDGWGVAVLVG 247

Query: 259 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318
           VP+KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLP VV+MYM+K+LE+EKFITHR+PFS
Sbjct: 248 VPNKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPLVVEMYMSKKLEVEKFITHRVPFS 307

Query: 319 EINKAFEYMVKGEGLRCIISMED 341
           EINKAF+YM KGEGLRCI+SME+
Sbjct: 308 EINKAFDYMTKGEGLRCIVSMEE 330

Source: Pyrus communis

Species: Pyrus communis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342851415|gb|AEL75222.1| alcohol dehydrogenase, partial [Pyrus ussuriensis]

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 271/320 (84%), Positives = 302/320 (94%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           +GQTPLFPRIFGHEA+G+VESVGEGV  LEVGDHVLPVFTGECGDC HC+S+ SNMCDLL
Sbjct: 7   KGQTPLFPRIFGHEASGIVESVGEGVEGLEVGDHVLPVFTGECGDCAHCKSEESNMCDLL 66

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
           RIN  RGVML+D ++RFSI+G P+NHFLGTSTFSEYTV+HSGC+AKINPLAPLD VCILS
Sbjct: 67  RINTDRGVMLSDEKTRFSIDGTPINHFLGTSTFSEYTVIHSGCLAKINPLAPLDIVCILS 126

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
           CG+STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARI+GASRIIGVDR+ KRFEEAK
Sbjct: 127 CGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARISGASRIIGVDRNPKRFEEAK 186

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
           KFGV +FVN  +H +P+QEVIAEMTNGG DRS+ECTGNI+ MISAFECVHDGWGVAVLVG
Sbjct: 187 KFGVNEFVNPKDHAKPVQEVIAEMTNGGADRSIECTGNINAMISAFECVHDGWGVAVLVG 246

Query: 259 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318
           VP KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVV+MYMNK+LE+EKFITHR+PFS
Sbjct: 247 VPYKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVEMYMNKKLEVEKFITHRVPFS 306

Query: 319 EINKAFEYMVKGEGLRCIIS 338
           EINKAF+YM +GEGLRCI+S
Sbjct: 307 EINKAFDYMTRGEGLRCIVS 326

Source: Pyrus ussuriensis

Species: Pyrus ussuriensis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342851413|gb|AEL75221.1| alcohol dehydrogenase, partial [Pyrus ussuriensis]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 271/320 (84%), Positives = 303/320 (94%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           +GQTPLFPRIFGHEA+G+VESVGEGV  LEVGDHVLPVFTGECGDC HC+S+ SNMCDLL
Sbjct: 7   KGQTPLFPRIFGHEASGIVESVGEGVEGLEVGDHVLPVFTGECGDCAHCKSEESNMCDLL 66

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
           RIN  RGVML+D ++RFSI+G P+NHFLGTSTFSEYTV+HSGC+AKINPLAPLD VCILS
Sbjct: 67  RINTDRGVMLSDEKTRFSIDGTPINHFLGTSTFSEYTVIHSGCLAKINPLAPLDIVCILS 126

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
           CG+STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARI+GASRIIGVDR+ KRFEEAK
Sbjct: 127 CGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARISGASRIIGVDRNPKRFEEAK 186

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
           KFGV +FVN  +HD+P+QEVIAEMTNGG DRS+E TGNI+ MISAFECVHDGWGVAVLVG
Sbjct: 187 KFGVNEFVNPKDHDKPVQEVIAEMTNGGADRSIERTGNINVMISAFECVHDGWGVAVLVG 246

Query: 259 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318
           VP+KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVV+MYMNK+LE+EKFITHR+PFS
Sbjct: 247 VPNKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVEMYMNKKLEVEKFITHRVPFS 306

Query: 319 EINKAFEYMVKGEGLRCIIS 338
           EINKAF+YM +GEGLRCI+S
Sbjct: 307 EINKAFDYMTRGEGLRCIVS 326

Source: Pyrus ussuriensis

Species: Pyrus ussuriensis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342851411|gb|AEL75220.1| alcohol dehydrogenase, partial [Pyrus communis]

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 269/320 (84%), Positives = 300/320 (93%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           +GQTPLFPRIFGHEA+G+VESVGEGV  LEVGDHVLPVFTGECGDC HC+S+ SNMCDLL
Sbjct: 7   KGQTPLFPRIFGHEASGIVESVGEGVEGLEVGDHVLPVFTGECGDCAHCKSEESNMCDLL 66

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
           RIN  RGVML+DG++RFSING P+NHFLGTSTFSEYTV+HSGC+AKINPLAPLD VCILS
Sbjct: 67  RINTDRGVMLSDGKTRFSINGTPINHFLGTSTFSEYTVIHSGCLAKINPLAPLDIVCILS 126

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
           CG+STGLG TLNVAKP++GSSVA+FGLGAVGLAAAEGARI+GASRIIGVDR+ KRFEEAK
Sbjct: 127 CGISTGLGVTLNVAKPKKGSSVAIFGLGAVGLAAAEGARISGASRIIGVDRNPKRFEEAK 186

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
           K GV +FVN  +HD+P+QE IAEMTNGG DRS+ECTGNI+ MISAFE VHDGWGVAVLVG
Sbjct: 187 KLGVNEFVNPKDHDKPVQEDIAEMTNGGADRSIECTGNINAMISAFEYVHDGWGVAVLVG 246

Query: 259 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318
           VP+KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLP VV+MYM+K+LE+EKFITHR+PFS
Sbjct: 247 VPNKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPLVVEMYMSKKLEVEKFITHRVPFS 306

Query: 319 EINKAFEYMVKGEGLRCIIS 338
           EINKAF+YM KGEGLRCI+S
Sbjct: 307 EINKAFDYMTKGEGLRCIVS 326

Source: Pyrus communis

Species: Pyrus communis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587152|ref|XP_002534157.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525768|gb|EEF28223.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 265/328 (80%), Positives = 298/328 (90%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQ PLFPRI+GHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +C HC+S+ SN
Sbjct: 53  YFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECAHCKSEESN 112

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MC LLRIN  RGVML DG SRFSING+P+ HF+GTSTFSEYTVVH GC+AKINPLAPLDK
Sbjct: 113 MCSLLRINTDRGVMLNDGNSRFSINGKPIYHFVGTSTFSEYTVVHVGCLAKINPLAPLDK 172

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP +GSSV VFGLGAVGLAAAEGARIAGASRIIGVD +S R
Sbjct: 173 VCVLSCGISTGLGATLNVAKPAKGSSVVVFGLGAVGLAAAEGARIAGASRIIGVDVNSSR 232

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FEEAKKFGVT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTGNID MISAFECVHDGWGV
Sbjct: 233 FEEAKKFGVTEFVNPKDYKKPVQEVIAEMTDGGVDRSVECTGNIDAMISAFECVHDGWGV 292

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP KDAVF T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YM+K+LELEKFITH
Sbjct: 293 AVLVGVPHKDAVFRTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELELEKFITH 352

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
            +PFSEINKAFEYM+KGEGLRCII ME+
Sbjct: 353 SVPFSEINKAFEYMLKGEGLRCIIRMEE 380

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|342851379|gb|AEL75206.1| alcohol dehydrogenase, partial [Pyrus pyrifolia]

 Score =  560 bits (1444), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 260/328 (79%), Positives = 301/328 (91%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQ PLFPRI+GHEA G+VES+GEGV+DL+ GDHVLPVFTGEC DC HC+S+ SN
Sbjct: 3   YFWEAKGQNPLFPRIYGHEAGGIVESIGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESN 62

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RGVML+DG+SRFSI G+P+ HF+GTSTFSEYTVVH GC+AKINPLAPLDK
Sbjct: 63  MCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPLAPLDK 122

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP++GS+VAVFGLGAVGLAAAEGAR++GASRIIGVD  S R
Sbjct: 123 VCLLSCGISTGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLRSGR 182

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FEEAKKFGVT+FVN  EH +P+QEVIAE+TNGGVDRS+ECTG+++ MISAFECVHDGWGV
Sbjct: 183 FEEAKKFGVTEFVNPKEHKKPVQEVIAELTNGGVDRSIECTGSVEFMISAFECVHDGWGV 242

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP K+AVF T P+N LNERTLKGTFFGNYKPRTD+PSVV+ YMNK+L+LEKFITH
Sbjct: 243 AVLVGVPHKEAVFKTHPVNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELQLEKFITH 302

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
           ++PFSEINKAFEYM+KGEGLRCII ME+
Sbjct: 303 KVPFSEINKAFEYMLKGEGLRCIIHMEE 330

Source: Pyrus pyrifolia

Species: Pyrus pyrifolia

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477028|ref|XP_002281349.2| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 260/327 (79%), Positives = 299/327 (91%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQTPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SN
Sbjct: 88  YFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQSGDHVLPVFTGECKECRHCKSEESN 147

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RGVML+D +SRFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDK
Sbjct: 148 MCDLLRINTDRGVMLSDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDK 207

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KR
Sbjct: 208 VCVLSCGISTGLGATLNVAKPWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKR 267

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           F +AKKFGVT+FVN  +HD+P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGV
Sbjct: 268 FNDAKKFGVTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGV 327

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP+KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH
Sbjct: 328 AVLVGVPNKDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITH 387

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISME 340
            +PF+EINKAFEYM+ G+GLRCII M+
Sbjct: 388 EVPFAEINKAFEYMLSGDGLRCIIRMD 414

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093368|ref|XP_002309899.1| predicted protein [Populus trichocarpa] gi|222852802|gb|EEE90349.1| predicted protein [Populus trichocarpa]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 264/326 (80%), Positives = 298/326 (91%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQTPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SN
Sbjct: 53  YFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESN 112

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RGVML DG+SRFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDK
Sbjct: 113 MCDLLRINTDRGVMLNDGKSRFSIKGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDK 172

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD +S R
Sbjct: 173 VCVLSCGISTGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNR 232

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           F+EAKKFGVT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+I+ MISAFECVHDGWGV
Sbjct: 233 FDEAKKFGVTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSINAMISAFECVHDGWGV 292

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP+KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK+LELEKFITH
Sbjct: 293 AVLVGVPNKDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEKFITH 352

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISM 339
            +PFSEINKAFEYM+ G GLRCII M
Sbjct: 353 EVPFSEINKAFEYMLSGAGLRCIIRM 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508983|ref|XP_003523232.1| PREDICTED: alcohol dehydrogenase-like [Glycine max]

 Score =  560 bits (1442), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 264/328 (80%), Positives = 298/328 (90%)

Query: 14  FVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           + +  +GQTPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +C HC+S+ SN
Sbjct: 54  YFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECDHCKSEESN 113

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           MCDLLRIN  RGVML DG++RFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDK
Sbjct: 114 MCDLLRINTDRGVMLNDGKARFSINGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDK 173

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+LSCG+STGLGATLNVAKP +GSSVAVFGLGAVGLAAAEGAR+AGASRIIGVD +SKR
Sbjct: 174 VCVLSCGISTGLGATLNVAKPNKGSSVAVFGLGAVGLAAAEGARLAGASRIIGVDLNSKR 233

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           F EAKKFGVT+FVN  ++D+P+QEVIAEMT GGVDRSVECTG+I+ MISAFECVHDGWGV
Sbjct: 234 FTEAKKFGVTEFVNPKDYDKPVQEVIAEMTGGGVDRSVECTGSINAMISAFECVHDGWGV 293

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           AVLVGVP+KD  F T PINVLNE+TLKGTFFGNYKPR+DLPSVV+MYMNK+LELEKFITH
Sbjct: 294 AVLVGVPNKDDAFKTHPINVLNEKTLKGTFFGNYKPRSDLPSVVEMYMNKELELEKFITH 353

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISMED 341
            +PF EINKAFEYM+KGE LRCII M +
Sbjct: 354 EVPFEEINKAFEYMLKGESLRCIIRMTE 381

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.941	0.846	0.663	9.1e-116
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.953	0.853	0.434	6.1e-71
TIGR_CMR|CPS_0817	376	CPS_0817 "alcohol dehydrogenas	0.950	0.861	0.394	1.3e-66
TIGR_CMR|SO_A0161	376	SO_A0161 "zinc-containing alco	0.950	0.861	0.385	3.2e-65
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.941	0.853	0.388	5.2e-65
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.920	0.839	0.4	1.4e-64
UNIPROTKB|P11766	374	ADH5 "Alcohol dehydrogenase cl	0.920	0.839	0.4	2.3e-64
UNIPROTKB|Q48F83	370	adhC "Alcohol dehydrogenase, c	0.941	0.867	0.401	2.9e-64
UNIPROTKB|Q3ZC42	374	ADH5 "Alcohol dehydrogenase cl	0.920	0.839	0.387	9.7e-64
TIGR_CMR|SO_2054	379	SO_2054 "alcohol dehydrogenase	0.950	0.854	0.373	1.6e-63

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1141 (406.7 bits), Expect = 9.1e-116, P = 9.1e-116
 Identities = 213/321 (66%), Positives = 246/321 (76%)

Query:    19 QGQTPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLL 78
             +GQTPLFPRIFGH                    HVLP+FTGECG+CRHC S+ SNMCDLL
Sbjct:    57 KGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLL 116

Query:    79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
             RIN  RG M+ DG+SRFSING+P+ HFLGTSTFSEYTVVHSG VAKINP APLDKVCI+S
Sbjct:   117 RINTERGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVS 176

Query:   139 CGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAK 198
             CG+STGLGATLNVAKP++                              VD +SKRF++AK
Sbjct:   177 CGLSTGLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAK 236

Query:   199 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
             +FGVT+ VN  +HD+PIQ+VIAEMT+GGVDRSVECTG++  MI AFECVHDGWGVAVLVG
Sbjct:   237 EFGVTECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVG 296

Query:   259 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318
             VPSKD  F T P+N LNERTLKGTFFGNYKP+TD+P VV+ YMNK+LELEKFITH +PFS
Sbjct:   297 VPSKDDAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFS 356

Query:   319 EINKAFEYMVKGEGLRCIISM 339
             EINKAF+YM+KGE +RCII+M
Sbjct:   357 EINKAFDYMLKGESIRCIITM 377

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 143/329 (43%), Positives = 198/329 (60%)

Query:    12 RNFVFGFQGQTPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDV 71
             R+ +  ++ Q+ L PRIFGH                    HVL VFTGECG CRHC S  
Sbjct:    54 RSDLSAWESQS-LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGK 112

Query:    72 SNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 131
             SNMC +L +   +G+M +D ++RFSI G+PV H+   S+FSEYTVVHSGC  K++PLAPL
Sbjct:   113 SNMCQVLGMER-KGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPL 171

Query:   132 DKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSS 191
              K+C+LSCGV+ GLGA  NVA  ++                              VD + 
Sbjct:   172 HKICLLSCGVAAGLGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINP 231

Query:   192 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW 251
              + E+AK FGVTDF+N+++   PI +VI  MT GG D S EC G+     +A +   DGW
Sbjct:   232 AKAEQAKTFGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGW 291

Query:   252 GVAVLVGVP-SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 310
             G+ V +GVP +K  V     +  L+ ++LKGT FG +KP++DLPS++D YMNK++ +++F
Sbjct:   292 GMTVTLGVPKAKPEVSAHYGL-FLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEF 350

Query:   311 ITHRIPFSEINKAFEYMVKGEGLRCIISM 339
             ITH + F EINKAF  M +G+ LRC++ M
Sbjct:   351 ITHNLSFDEINKAFVLMREGKCLRCVLHM 379

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

TIGR_CMR|CPS_0817 CPS_0817 "alcohol dehydrogenase, class III" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 129/327 (39%), Positives = 186/327 (56%)

Query:    16 FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
             F   G  P  +FP I GH                    HV+P++T ECG+C+ C S  +N
Sbjct:    50 FTLSGDDPEGIFPVILGHEGGGIVEQIGAGVTSVKVGDHVIPLYTPECGECKFCLSGKTN 109

Query:    74 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
             +C  +R    +G+M  DG +RF  +G+P+ H++G STFSEYTV+    +AK+N  APL++
Sbjct:   110 LCQKIRETQGKGLM-PDGTTRFYKDGQPIFHYMGCSTFSEYTVLPEISLAKVNKDAPLEE 168

Query:   134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
             VC+L CGV+TG+GA +N AK E                               +D +  +
Sbjct:   169 VCLLGCGVTTGMGAVMNTAKVEEGATVAIFGLGGIGLSAVIGATMAKASRIIAIDINESK 228

Query:   194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
             FE AKK G TDF+N  ++D+PIQ+VI EMT+GGVD S EC GN++ M SA EC H GWG 
Sbjct:   229 FELAKKLGATDFINPKDYDKPIQDVIVEMTDGGVDYSFECIGNVNLMRSALECCHKGWGE 288

Query:   254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
             +V++GV        T+P  ++  R  +G+ FG  K RT+LP  V+ Y+  + +L  FITH
Sbjct:   289 SVVIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELPDYVERYLAGEFKLSDFITH 348

Query:   314 RIPFSEINKAFEYMVKGEGLRCIISME 340
              +P  +IN++FE M KGE +R +I  +
Sbjct:   349 TMPLEDINESFELMHKGESIRSVIHFD 375

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

TIGR_CMR|SO_A0161 SO_A0161 "zinc-containing alcohol dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
 Identities = 126/327 (38%), Positives = 186/327 (56%)

Query:    16 FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
             F   G  P  +FP I GH                    HV+P++T ECG+C+ C+S  +N
Sbjct:    50 FTLSGDDPEGIFPCILGHEGGGIVESIGEGVTSVQVGDHVIPLYTPECGECKFCKSGKTN 109

Query:    74 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
             +C  +R    +G+M  DG SRFS +G+ + H++GTSTFSEYTV+    +AK+NP APL++
Sbjct:   110 LCQKIRETQGKGLM-PDGTSRFSKDGQIIYHYMGTSTFSEYTVLPEISLAKVNPDAPLEE 168

Query:   134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
             VC+L CGV+TG+GA +N AK E                               +D +  +
Sbjct:   169 VCLLGCGVTTGMGAVMNTAKVEEGATVAIFGMGGIGLSAVIGATMAKASRIIVIDINESK 228

Query:   194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
             FE A K G TDF+N  ++D+PIQ+VI E+T+GGVD S EC GN++ M SA EC H GWG 
Sbjct:   229 FELAGKLGATDFINPKDYDKPIQDVIVELTDGGVDYSFECIGNVNVMRSALECCHKGWGE 288

Query:   254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
             +V++GV        T+P  ++  R  KG+ FG  K R++LP  V+ Y+  + +L  FITH
Sbjct:   289 SVVIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPEYVERYLAGEFKLSDFITH 348

Query:   314 RIPFSEINKAFEYMVKGEGLRCIISME 340
              +   ++N AF+ M +G+ +R +I  +
Sbjct:   349 TMSLEQVNDAFDLMHQGKSIRTVIHFD 375

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 126/324 (38%), Positives = 186/324 (57%)

Query:    16 FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
             +   G  P  LFP I GH                     V+P++  +CG+C+ C++  +N
Sbjct:    52 YTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTN 111

Query:    74 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
             +C  +R+   +G+M  D  SRF+  G+ + HF+GTSTFSEYTVV    +AK++  APLDK
Sbjct:   112 LCQKIRVTQGQGLM-PDNTSRFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDK 170

Query:   134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
             VC+L CG+STG GA +N AK E                               +D +  +
Sbjct:   171 VCLLGCGISTGYGAAINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDK 230

Query:   194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
             FE AKKFG T+FVN  +H +PIQEV+ E+T+GGVD S EC GN+  M +A E  H GWG 
Sbjct:   231 FEIAKKFGATEFVNPKDHSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGT 290

Query:   254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
             +V++GV        T+P  ++  RT KGT FG +K    +P +V+ YMNK+L +++F+TH
Sbjct:   291 SVIIGVAGAGQEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTH 350

Query:   314 RIPFSEINKAFEYMVKGEGLRCII 337
              +PF++IN+AF+ M  G+ +R ++
Sbjct:   351 TLPFAQINEAFDLMHAGKSIRAVL 374

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 126/315 (40%), Positives = 183/315 (58%)

Query:    25 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
             FP I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +
Sbjct:    61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120

Query:    85 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
             G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CGVSTG
Sbjct:   121 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTG 179

Query:   145 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 204
              GA +N AK E                               VD +  +F  AK+FG ++
Sbjct:   180 YGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASE 239

Query:   205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
              +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +   
Sbjct:   240 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299

Query:   265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
                T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH +PF +IN+AF
Sbjct:   300 EIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAF 359

Query:   325 EYMVKGEGLRCIISM 339
             E M  G+ +R +I +
Sbjct:   360 ELMHAGKSIRTVIKL 374

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)]

 Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
 Identities = 126/315 (40%), Positives = 182/315 (57%)

Query:    25 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
             FP I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +
Sbjct:    61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120

Query:    85 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
             G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG
Sbjct:   121 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179

Query:   145 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 204
              GA +N AK E                               VD +  +F  AK+FG T+
Sbjct:   180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239

Query:   205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
              +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +   
Sbjct:   240 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299

Query:   265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
                T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH + F EINKAF
Sbjct:   300 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAF 359

Query:   325 EYMVKGEGLRCIISM 339
             E M  G+ +R ++ +
Sbjct:   360 ELMHSGKSIRTVVKI 374

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0051775 "response to redox state" evidence=IDA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IDA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=TAS

UNIPROTKB|Q48F83 adhC "Alcohol dehydrogenase, class III" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)]

 Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
 Identities = 130/324 (40%), Positives = 181/324 (55%)

Query:    16 FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
             +   G  P  +FP I GH                    HV+P++T EC  C+ CRS  +N
Sbjct:    46 YTLSGADPEGIFPSILGHEGGAIVEAIGEGVTSVAVGDHVIPLYTPECRQCKFCRSGKTN 105

Query:    74 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
             +C  +R    +G+M  DG +RFS  GEP+ H++GTSTFSEYTV+    VAKI+  APL+K
Sbjct:   106 LCQAIRATQGKGLM-PDGTTRFSYKGEPIFHYMGTSTFSEYTVLPEISVAKIDKQAPLEK 164

Query:   134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
             VC+L CGV+TG+GA LN AK +                               +D +  +
Sbjct:   165 VCLLGCGVTTGIGAVLNTAKVKPGDTVAIFGLGGIGLSALIGAVKAKASRIIAIDINPAK 224

Query:   194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
             FE AK+ G TD VN  + DRPIQEVI +MT+GGVD S EC GN+  M +A E  H GWG 
Sbjct:   225 FEIAKQLGATDCVNPKDFDRPIQEVIVDMTDGGVDFSFECIGNVQLMRAALESCHKGWGE 284

Query:   254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
             +V++GV        T+P  ++  R  +G+ FG  + RT+LPS VDM    ++ L+ FITH
Sbjct:   285 SVIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVRGRTELPSYVDMAQTGEIPLDTFITH 344

Query:   314 RIPFSEINKAFEYMVKGEGLRCII 337
              +   +INKAF+ M +G+ +R +I
Sbjct:   345 TMGLEDINKAFDLMHEGKSIRTVI 368

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0046164 "alcohol catabolic process" evidence=ISS

GO:0046292 "formaldehyde metabolic process" evidence=ISS

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=ISS

UNIPROTKB|Q3ZC42 ADH5 "Alcohol dehydrogenase class-3" [Bos taurus (taxid:9913)]

 Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
 Identities = 122/315 (38%), Positives = 183/315 (58%)

Query:    25 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
             +P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +
Sbjct:    61 YPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120

Query:    85 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
             G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG
Sbjct:   121 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179

Query:   145 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 204
              GA LN AK E                               VD +  +F  AK+FG ++
Sbjct:   180 YGAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASE 239

Query:   205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
              +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWG++V+VGV +   
Sbjct:   240 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGE 299

Query:   265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
                T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH +PF +IN+AF
Sbjct:   300 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAF 359

Query:   325 EYMVKGEGLRCIISM 339
             + M  G+ +R ++ +
Sbjct:   360 DLMHAGKSIRTVVKL 374

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

TIGR_CMR|SO_2054 SO_2054 "alcohol dehydrogenase class III" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
 Identities = 122/327 (37%), Positives = 182/327 (55%)

Query:    16 FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
             F   G  P  +FP I GH                    HV+P++T ECG+C+ C S  +N
Sbjct:    53 FTLSGDDPEGVFPAILGHEGGGIVEQVGEGVTSVQVGDHVIPLYTPECGECKFCLSGKTN 112

Query:    74 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
             +C  +R    +G+M  DG +RF  +G+P+ H++G STFSEYTV+    +AK+N  APL +
Sbjct:   113 LCQKIRATQGKGLM-PDGTTRFYKDGQPIFHYMGCSTFSEYTVLPEISLAKVNKTAPLKE 171

Query:   134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
             +C+L CGV+TG+GA +N AK E                               +D +  +
Sbjct:   172 ICLLGCGVTTGMGAVMNTAKVEAGATVAIFGLGGIGLSAIIGATMAKASRIIAIDINESK 231

Query:   194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
             FE A+K G TD +N    D+PIQEVI EMT+GGVD S EC GN++ M SA EC H GWG 
Sbjct:   232 FELARKLGATDCINPKNFDKPIQEVIVEMTDGGVDYSFECIGNVNVMRSALECCHKGWGE 291

Query:   254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
             +V++GV        T+P  ++  R  +G+ FG  K R+ LP +V+ Y+  + +L+ FITH
Sbjct:   292 SVIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRSQLPKIVEQYLAGEFKLDDFITH 351

Query:   314 RIPFSEINKAFEYMVKGEGLRCIISME 340
              +   ++N+AF+ M +G+ +R +I  +
Sbjct:   352 TMGLEQVNEAFDLMHEGKSIRSVIHFD 378

GO:0004024 "alcohol dehydrogenase activity, zinc-dependent" evidence=ISS

GO:0006113 "fermentation" evidence=ISS

GO:0008270 "zinc ion binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2R8Z5	ADH1_ORYSJ	1, ., 1, ., 1, ., 1	0.7682	0.9618	0.8654	yes	no
P80467	ADHX_UROHA	1, ., 1, ., 1, ., 2, 8, 4	0.5111	0.9149	0.8364	N/A	no
O19053	ADHX_RABIT	1, ., 1, ., 1, ., 2, 8, 4	0.4877	0.9472	0.8636	yes	no
P06525	ADH1_ARATH	1, ., 1, ., 1, ., 1	0.7822	0.9560	0.8601	yes	no
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.5015	0.9208	0.8395	yes	no
P14674	ADH2_SOLTU	1, ., 1, ., 1, ., 1	0.7926	0.9618	0.8631	N/A	no
P14675	ADH3_SOLTU	1, ., 1, ., 1, ., 1	0.7926	0.9618	0.8631	N/A	no
A2XAZ3	ADHX_ORYSI	1, ., 1, ., 1, ., 2, 8, 4	0.5443	0.9530	0.8530	N/A	no
P14673	ADH1_SOLTU	1, ., 1, ., 1, ., 1	0.7926	0.9618	0.8631	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.5047	0.9208	0.8395	yes	no
P28032	ADH2_SOLLC	1, ., 1, ., 1, ., 1	0.7865	0.9618	0.8631	N/A	no
P93629	ADHX_MAIZE	1, ., 1, ., 1, ., 2, 8, 4	0.5412	0.9530	0.8530	N/A	no
P48977	ADH_MALDO	1, ., 1, ., 1, ., 1	0.7896	0.9618	0.8631	N/A	no
P00333	ADH1_MAIZE	1, ., 1, ., 1, ., 1	0.7682	0.9618	0.8654	N/A	no
P00327	ADH1E_HORSE	1, ., 1, ., 1, ., 1	0.4794	0.9237	0.84	yes	no
P80572	ADHX_PEA	1, ., 1, ., 1, ., 2, 8, 4	0.5304	0.9618	0.8677	N/A	no
Q4R1E8	ADH2_ORYSI	1, ., 1, ., 1, ., 1	0.7225	0.9618	0.8654	N/A	no
Q17335	ADHX_CAEEL	1, ., 1, ., 1, ., 2, 8, 4	0.4592	0.9501	0.8437	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.4952	0.9208	0.8395	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4754	0.9413	0.8469	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.5	0.9472	0.8636	yes	no
P25141	ADH1_PETHY	1, ., 1, ., 1, ., 1	0.7682	0.9589	0.8560	N/A	no
P05336	ADH1_HORVU	1, ., 1, ., 1, ., 1	0.7469	0.9618	0.8654	N/A	no
P12886	ADH1_PEA	1, ., 1, ., 1, ., 1	0.7804	0.9618	0.8631	N/A	no
P13603	ADH1_TRIRP	1, ., 1, ., 1, ., 1	0.7652	0.9618	0.8631	N/A	no
P17648	ADH_FRAAN	1, ., 1, ., 1, ., 1	0.7713	0.9618	0.8631	N/A	no
P04707	ADH2_MAIZE	1, ., 1, ., 1, ., 1	0.7439	0.9618	0.8654	N/A	no
P14219	ADH1_PENAM	1, ., 1, ., 1, ., 1	0.7652	0.9618	0.8654	N/A	no
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.4952	0.9208	0.8395	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.4559	0.9472	0.8522	yes	no
P26325	ADH1_GADMC	1, ., 1, ., 1, ., 1	0.5031	0.9208	0.8373	N/A	no
Q0ITW7	ADH2_ORYSJ	1, ., 1, ., 1, ., 1	0.7225	0.9618	0.8654	no	no
Q75ZX4	ADH1_ORYSI	1, ., 1, ., 1, ., 1	0.7682	0.9618	0.8654	N/A	no
P10847	ADH2_HORVU	1, ., 1, ., 1, ., 1	0.7103	0.9442	0.8632	N/A	no
Q07264	ADH1_ZEALU	1, ., 1, ., 1, ., 1	0.7773	0.8563	0.9965	N/A	no
P10848	ADH3_HORVU	1, ., 1, ., 1, ., 1	0.7492	0.9472	0.8522	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.1	0.991

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	341
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-168
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-160
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-146
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-144
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-136
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-136
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-136
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-127
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-110
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	8e-85
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-84
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	9e-77
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	3e-70
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	7e-59
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	8e-52
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-50
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	8e-48
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	2e-46
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	3e-45
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	1e-44
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	8e-44
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	6e-43
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	1e-42
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	8e-42
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	7e-41
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	3e-40
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	5e-40
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	1e-39
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-39
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	6e-39
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	3e-36
cd05281	341	cd05281, TDH, Threonine dehydrogenase	1e-34
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	2e-30
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	8e-30
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	8e-30
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-29
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	6e-29
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	3e-28
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	2e-27
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	3e-27
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	4e-27
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	6e-26
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	2e-25
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	4e-25
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	8e-25
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-24
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	3e-24
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	3e-24
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	4e-23
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-22
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	5e-21
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	2e-20
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	2e-19
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	5e-18
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	9e-18
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-17
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	7e-17
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	8e-17
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	1e-16
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	9e-16
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-15
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	6e-15
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-14
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	7e-14
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	3e-13
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	5e-13
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	1e-11
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	1e-11
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	2e-11
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	9e-11
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-10
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-10
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-10
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	3e-09
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	6e-09
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	3e-08
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	5e-08
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	1e-07
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	1e-07
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	1e-07
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	7e-07
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	2e-06
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	6e-06
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	9e-06
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-05
smart00829	287	smart00829, PKS_ER, Enoylreductase	2e-05
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	2e-05
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	4e-05
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	4e-05
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	5e-05
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	6e-05
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	1e-04
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	2e-04
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	2e-04
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	2e-04
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	4e-04
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	0.001
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	0.001
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	0.002

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  616 bits (1591), Expect = 0.0
 Identities = 246/319 (77%), Positives = 283/319 (88%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           +GQTPLFPRI GHEAAG+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLL
Sbjct: 50  KGQTPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLL 109

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
           RIN  RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LS
Sbjct: 110 RINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLS 169

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
           CGVSTGLGA  NVAK ++GS+VA+FGLGAVGLA AEGARI GASRIIGVD +  +FE+AK
Sbjct: 170 CGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK 229

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
           KFGVT+FVN  +HD+P+QEVIAEMT GGVD S ECTGNID MISAFECVHDGWGV VL+G
Sbjct: 230 KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLG 289

Query: 259 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318
           VP KDAVF T P+N+LN RTLKGT FG YKP+TDLP++V+ YM K+LELEKFITH +PFS
Sbjct: 290 VPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFS 349

Query: 319 EINKAFEYMVKGEGLRCII 337
           EINKAF+ ++KGE LRCI+
Sbjct: 350 EINKAFDLLLKGECLRCIL 368

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  471 bits (1214), Expect = e-168
 Identities = 176/316 (55%), Positives = 227/316 (71%), Gaps = 3/316 (0%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
            LFP I GHE AG+VESVGEGV++L+ GD V+P+F G+CG+C +CRS  +N+C   R N 
Sbjct: 53  TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANE 112

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
               ++ DG SRF+  G+ + HFLGTSTFS+YTVV    VAKI+P APL+ VC+L CG S
Sbjct: 113 --SGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFS 170

Query: 143 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202
           TG GA  N AK E GS+VAVFGLGAVGL+A  GA+IAGASRIIGVD +  +FE+AK+FG 
Sbjct: 171 TGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGA 230

Query: 203 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 262
           TDF+N  + D+P+ EVI EMT GGVD S ECTGN D M  A E    GWGV+V+VGVP  
Sbjct: 231 TDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG 290

Query: 263 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 322
             +   +P  ++  RT KG+FFG +K R+D+P +V  YMNK+ +L++ ITH +PF EINK
Sbjct: 291 AEL-SIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINK 349

Query: 323 AFEYMVKGEGLRCIIS 338
            F+ M  GE +R +I+
Sbjct: 350 GFDLMKSGECIRTVIT 365

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  450 bits (1161), Expect = e-160
 Identities = 171/314 (54%), Positives = 230/314 (73%), Gaps = 1/314 (0%)

Query: 24  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           LFP I GHE AG+VESVGEGV+ ++ GDHV+P++T ECG+C+ C+S  +N+C  +R    
Sbjct: 55  LFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQG 114

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 143
           +G+M  DG SRFS  G+P+ HF+GTSTFSEYTVV    VAKINP APLDKVC+L CGV+T
Sbjct: 115 KGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTT 173

Query: 144 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 203
           G GA LN AK E GS+VAVFGLGAVGLA  +GA+ AGASRIIG+D +  +FE AKKFG T
Sbjct: 174 GYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGAT 233

Query: 204 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 263
           D VN  +HD+PIQ+V+ EMT+GGVD + EC GN+  M +A E  H GWG +V++GV +  
Sbjct: 234 DCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG 293

Query: 264 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKA 323
               T+P  ++  R  KGT FG +K R+ +P +V+ YM  ++++++FITH +P  EIN+A
Sbjct: 294 QEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEA 353

Query: 324 FEYMVKGEGLRCII 337
           F+ M  G+ +R ++
Sbjct: 354 FDLMHAGKSIRTVV 367

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  416 bits (1070), Expect = e-146
 Identities = 165/315 (52%), Positives = 232/315 (73%), Gaps = 2/315 (0%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           +PRI GHEAAG+VESVGEGV DL+ GDHV+P+F GECGDCR+C+ D +N+C+  R++P +
Sbjct: 65  YPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFK 124

Query: 85  GVMLADGQSRFSI--NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
            VM+ DG++RFS   +G+P+ HFL TSTF+EYTV+ S CV KI+P APL K+ +LSCGVS
Sbjct: 125 SVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVS 184

Query: 143 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202
           TG+GA  N A  + GSSVA+FGLGAVGLA AEGAR  GAS+IIGVD + ++FE+ K+ G+
Sbjct: 185 TGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244

Query: 203 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 262
           TDF+N  + D+P+ E I EMT GGVD S EC GN++ +  AF   HDGWG+ VL+G+   
Sbjct: 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT 304

Query: 263 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 322
             +    P+ + + R++ G+ FG++K ++ LP++    M   + L+ FITH +PF +IN+
Sbjct: 305 PKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINE 364

Query: 323 AFEYMVKGEGLRCII 337
           AF+ +  G+ LRC++
Sbjct: 365 AFQLLEDGKALRCLL 379

Length = 381

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  411 bits (1058), Expect = e-144
 Identities = 179/319 (56%), Positives = 233/319 (73%), Gaps = 1/319 (0%)

Query: 21  QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80
              LFPRIFGHEA+G+VES+GEGV++ E GDHVL VFTGECG CRHC S  SNMC +L +
Sbjct: 59  SQALFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGL 118

Query: 81  NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCG 140
              +GVM +D ++RFSI G+PV H+   S+FSEYTVVHSGC  K++PLAPL K+C+LSCG
Sbjct: 119 ER-KGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCG 177

Query: 141 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 200
           V+ GLGA  NVA   +GSSV +FGLG VGL+ A+GA++ GAS+IIGVD + ++ E+AK F
Sbjct: 178 VAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTF 237

Query: 201 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
           GVTDF+N ++   PIQ+VI  MT GG D S EC G+     +A +   DGWG+ V +GVP
Sbjct: 238 GVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVP 297

Query: 261 SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 320
                        L+ RTLKG+ FG +KP++DLPS+VD YMNK++ +++FITH + F EI
Sbjct: 298 KAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEI 357

Query: 321 NKAFEYMVKGEGLRCIISM 339
           NKAFE M +G+ LRC+I M
Sbjct: 358 NKAFELMREGKCLRCVIHM 376

Length = 378

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  392 bits (1009), Expect = e-136
 Identities = 163/326 (50%), Positives = 231/326 (70%), Gaps = 3/326 (0%)

Query: 16  FGFQGQTP--LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 73
           F   G  P  +FP I GHE AG+VE+VGEGV+ ++VGDHV+P++T ECG+C+ C S  +N
Sbjct: 44  FTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTN 103

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           +C  +R    +G+M  DG SRFS +G+P+ H++G STFSEYTVV    +AKINP APL++
Sbjct: 104 LCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEE 162

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           VC+L CGV+TG+GA LN AK E G +VAVFGLG +GL+  +GAR+A ASRII +D +  +
Sbjct: 163 VCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAK 222

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           FE AKK G TD VN +++D+PIQEVI E+T+GGVD S EC GN++ M +A EC H GWG 
Sbjct: 223 FELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGE 282

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           ++++GV        T+P  ++  R  +G+ FG  K RT+LP +V+ YM  ++ L+ F+TH
Sbjct: 283 SIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTH 342

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISM 339
            +P  +IN+AF+ M +G+ +R +I  
Sbjct: 343 TMPLEDINEAFDLMHEGKSIRTVIHY 368

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  392 bits (1009), Expect = e-136
 Identities = 154/315 (48%), Positives = 212/315 (67%), Gaps = 3/315 (0%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           FP + GHE AG+VE+VGEGV+ ++ GDHV+ +FT ECG C+ C S   N+C+ +R    +
Sbjct: 55  FPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGK 114

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           G M  DG +R S NG PV H+LG STF+EYTVVH   + KI+P APL+K C+L CGV+TG
Sbjct: 115 GTMP-DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTG 173

Query: 145 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 204
           +GA +N AK E G +VAVFGLG VGLAA +GA+ AGA RII VD + ++ E AKKFG T 
Sbjct: 174 IGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATH 233

Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
           FVN  E D  + E I E+T+GG D + EC GN++ M  A E  H   G +V++GV     
Sbjct: 234 FVNPKEVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQ 291

Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
              T+P  ++  R  KG+ FG  +PR+D+P +VD+YM  +L L++ +TH IP  +IN+AF
Sbjct: 292 EISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAF 351

Query: 325 EYMVKGEGLRCIISM 339
           + M +G+ +R +I  
Sbjct: 352 DLMHEGKSIRSVIRF 366

Length = 366

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  390 bits (1005), Expect = e-136
 Identities = 153/317 (48%), Positives = 212/317 (66%), Gaps = 1/317 (0%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
             FP I GHEAAG+VESVGEGV+ ++ GD V+P+F  +CG CR C +  SN+C    +  
Sbjct: 58  TPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGK 117

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
            +G+M  DG SRF+  G+P++HFLGTSTFSEYTVV    VAKI+  APL+KVC++ CG S
Sbjct: 118 PQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFS 176

Query: 143 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202
           TG GA +N AK   GS+ AVFGLG VGL+A  G + AGASRII VD +  +F +AK+ G 
Sbjct: 177 TGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGA 236

Query: 203 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 262
           T+ +N  ++ +PIQEV+ EMT+GGVD S E  G +D M +A    H+G+GV+V+VGVP  
Sbjct: 237 TECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296

Query: 263 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 322
                  P+ +L  RT KG  FG +K +  +P +V  YM K+  L+  ITH +PF +IN+
Sbjct: 297 SQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINE 356

Query: 323 AFEYMVKGEGLRCIISM 339
            F+ +  G+ +R +++ 
Sbjct: 357 GFDLLRSGKSIRTVLTF 373

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  367 bits (945), Expect = e-127
 Identities = 149/314 (47%), Positives = 206/314 (65%), Gaps = 1/314 (0%)

Query: 24  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
             P I GHE AG+VES+G GV+ L+ GD V+P+F  +CG C+ C +   N+C   R    
Sbjct: 52  PLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNG 111

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 143
           RG+M +DG SRF+  G+P++HFLGTSTF+EYTVV    +AKI+P APL+KVC++ CG ST
Sbjct: 112 RGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFST 170

Query: 144 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 203
           G GA +N AK   GS+ AVFGLG VGL+   G + AGASRII VD +  +FE+AK+ G T
Sbjct: 171 GYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGAT 230

Query: 204 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 263
           + +N  + D+PI EV+ EMT+GGVD + E  G+ D +  A +    G G +V+VGVP   
Sbjct: 231 ECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG 290

Query: 264 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKA 323
                 P ++L  RT+KGT FG +K +  +P +V +Y  K+  L++ ITH +PF EIN  
Sbjct: 291 TEATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDG 350

Query: 324 FEYMVKGEGLRCII 337
           F+ M  GE +R I+
Sbjct: 351 FDLMRSGESIRTIL 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  324 bits (832), Expect = e-110
 Identities = 134/325 (41%), Positives = 186/325 (57%), Gaps = 14/325 (4%)

Query: 19  QGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 77
            G  P   P + GHE AGVVE VG GV+ ++ GDHV+  +   CG CR+C     N+CD 
Sbjct: 46  TGDLPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCD- 104

Query: 78  LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 137
                + G  L DG  RF+ +GEPV    G  TF+EYTVV    V KI+   PLD+  +L
Sbjct: 105 -LGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALL 163

Query: 138 SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197
            CGV+TG+GA +N A+   G +VAV G G VGL A +GARIAGASRII VD   ++ E A
Sbjct: 164 GCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELA 223

Query: 198 KKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 256
           ++FG T  VN SE D    E + ++T+G G D + E  G    +  A      G G AV+
Sbjct: 224 RRFGATHTVNASEDD--AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVV 280

Query: 257 VGVPSKDAVFMTKPIN----VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 312
           VG+        T  +      L+E+ L+G+ +G+  PR D+P ++D+Y   +L+L++ +T
Sbjct: 281 VGMGPPG---ETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVT 337

Query: 313 HRIPFSEINKAFEYMVKGEGLRCII 337
            R    EIN+AF  M+ GE  R +I
Sbjct: 338 RRYSLDEINEAFADMLAGENARGVI 362

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  260 bits (666), Expect = 8e-85
 Identities = 120/318 (37%), Positives = 171/318 (53%), Gaps = 12/318 (3%)

Query: 19  QGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD- 76
            G  P   P + GHE AGVVE+VG  V+ L+ GDHV+  F   CG+C +C S     C+ 
Sbjct: 48  DGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCEN 106

Query: 77  LLRINPVRGVMLADGQSRFSIN-GEPVN-HFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 134
              +N        DG +  S++ G PV+ HF G S+F+ Y VVH   V K++   PL+ +
Sbjct: 107 FFPLN--FSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELL 164

Query: 135 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 194
             L CG+ TG GA LNV KP  GSS+AVFG GAVGLAA   A+IAG + II VD    R 
Sbjct: 165 APLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRL 224

Query: 195 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVA 254
           E AK+ G T  +N  E D  +   I E+T GGVD +++ TG    +  A + +    G  
Sbjct: 225 ELAKELGATHVINPKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTL 281

Query: 255 VLVGVPSKDAVFMTKPINVLNE-RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
            LVG P   A       ++L   +T++G   G+  P+  +P ++++Y   +   +K +T 
Sbjct: 282 ALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTF 341

Query: 314 RIPFSEINKAFEYMVKGE 331
             PF +IN+A      G+
Sbjct: 342 Y-PFEDINQAIADSESGK 358

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  259 bits (664), Expect = 2e-84
 Identities = 127/313 (40%), Positives = 180/313 (57%), Gaps = 5/313 (1%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
           P   GHEAAGVV  VGEGV+DLEVGDHV+ VF   CG CR C      +C+        G
Sbjct: 62  PMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAG 121

Query: 86  VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 145
            +L  G  R  + G  +NH LG S F+EY VV    V KI+   PL+   +  C V TG+
Sbjct: 122 TLL-SGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGV 180

Query: 146 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 205
           GA +N A    G SVAV GLG VGL+A  GA  AGAS+++ VD +  +   A++ G T  
Sbjct: 181 GAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATAT 240

Query: 206 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 265
           VN  + +    E + E+T GGVD + E  G++  + +A+E    G G  V  G+P  +A 
Sbjct: 241 VNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEAR 297

Query: 266 FMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
                ++ V  ERTLKG++ G+  PR D+P  + +Y++ +L ++K +THR+P  EIN+ F
Sbjct: 298 LSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGF 357

Query: 325 EYMVKGEGLRCII 337
           + +  GE +R +I
Sbjct: 358 DRLAAGEAVRQVI 370

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  239 bits (613), Expect = 9e-77
 Identities = 118/320 (36%), Positives = 181/320 (56%), Gaps = 10/320 (3%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
           P +P + GHE AGVV  VG GV+ ++ GDHV+  F   CG CR C + + N+CDL     
Sbjct: 53  PRYPILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDL-GAAL 111

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
           + G  ++DG  RF  +G+ V       TFSEYTVV    V KI+   PLDK C++ CGV 
Sbjct: 112 LTGSQISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVP 171

Query: 143 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202
           TG G+ +N+A    G +V V G+G VG+ A +GA +AGA ++I VD    + E+A KFG 
Sbjct: 172 TGWGSAVNIADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGA 231

Query: 203 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID-NMIS-AFECVHDGWGVAVLVGV 259
           T    + E    +Q ++ E+TNG G D+++   G +D   I+ A      G G  V+ G+
Sbjct: 232 THAFASMEE--AVQ-LVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGL 287

Query: 260 --PSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317
              +   V +      L ++ L+GT FG   PR D+P ++++Y   +L+L++ IT     
Sbjct: 288 GPMADVDVKVNLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTL 347

Query: 318 SEINKAFEYMVKGEGLRCII 337
            +IN+ ++ M+ G+ +R +I
Sbjct: 348 DQINEGYQDMLDGKNIRGVI 367

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  222 bits (568), Expect = 3e-70
 Identities = 121/315 (38%), Positives = 174/315 (55%), Gaps = 14/315 (4%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           FP + GHEAAGVVE+VGEGV+D+  GD+V+  +   CG CR C+      C     N  +
Sbjct: 54  FPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTH-NATQ 112

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
            + L DG          ++  LG   F+E T+VH+G   K++P A      +L CGV  G
Sbjct: 113 KMTLTDGT--------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAG 164

Query: 145 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 204
           LGA +N    +RG SVAV G G VG AA  GA +AGAS+II VD   ++ E A++FG T 
Sbjct: 165 LGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATH 224

Query: 205 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 263
            VN+S  D P++  I  +T G G D  ++  G  +    AF    D  G  VLVGVP+ D
Sbjct: 225 TVNSSGTD-PVEA-IRALTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTPD 281

Query: 264 AVFMTKPINVLNE-RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINK 322
                  ++V      LK +++G+  P  D P +VD+Y+  +L L+ F+T RI   ++ +
Sbjct: 282 MTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEE 341

Query: 323 AFEYMVKGEGLRCII 337
           AF+ M  G+ LR ++
Sbjct: 342 AFDKMHAGDVLRSVV 356

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  193 bits (492), Expect = 7e-59
 Identities = 109/331 (32%), Positives = 161/331 (48%), Gaps = 18/331 (5%)

Query: 18  FQGQTPLFPR--IFGHEAAGVVESVGEGVSD---LEVGDHVLPVFTGECGDCRHCRSDVS 72
            +G+ P FP   + GHE +G V  VG  V +   L VGD V+  F   CG CR+C     
Sbjct: 45  LKGELP-FPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKE 103

Query: 73  NMCDLLRINPVRGVMLADGQSR-FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 131
           N+C+           L DG +R F ++G PV  +      +EY VV +  +A +      
Sbjct: 104 NLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDY 162

Query: 132 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191
            +  +L C   T  GA  + A    G +VAV G+G VG +A + A+  GAS II VD   
Sbjct: 163 TESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRD 222

Query: 192 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDG 250
           ++  +AK+ G T  VN ++ D      I E+T G GVD  VE  G  +    A + V DG
Sbjct: 223 EKLAKAKELGATHTVNAAKEDAV--AAIREITGGRGVDVVVEALGKPETFKLALDVVRDG 280

Query: 251 WGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE 308
            G AV+VG+    A        + V     + G++    +PR DLP +V +  + +L+ E
Sbjct: 281 -GRAVVVGLAPGGATAEIPITRL-VRRGIKIIGSY--GARPRQDLPELVGLAASGKLDPE 336

Query: 309 KFITHRIPFSEINKAFEYMVKGEG-LRCIIS 338
             +TH+    EIN+A+E + KG    R I+ 
Sbjct: 337 ALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  174 bits (443), Expect = 8e-52
 Identities = 89/307 (28%), Positives = 133/307 (43%), Gaps = 23/307 (7%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
             I GHE  G V  VG  V   +VGD V+      CG CR+CR+   N+C+        G
Sbjct: 56  DIILGHEFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAG 114

Query: 86  VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 145
           +                    G   F+EY  V +       P    ++   L+  ++T  
Sbjct: 115 LG---------------GGIDGG--FAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAY 157

Query: 146 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 205
                 A    G +V V G G +GL A   A++ GAS +I VDRS +R E AK+ G  D 
Sbjct: 158 HGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADV 217

Query: 206 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
           V     D      I E+T G G D  +E  G+   +  A E +  G G  V+VGV   + 
Sbjct: 218 VVNPSEDDAG-AEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGED 275

Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
           + +   + V  E TL+G+       R D    +D+  + +++ EK ITHR+P  +  +A+
Sbjct: 276 IPLPAGLVVSKELTLRGSL--RPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAY 333

Query: 325 EYMVKGE 331
           E     +
Sbjct: 334 ELFADRK 340

Length = 350

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  169 bits (430), Expect = 1e-50
 Identities = 77/289 (26%), Positives = 116/289 (40%), Gaps = 36/289 (12%)

Query: 15  VFGFQGQTPL---FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDV 71
           +   +G  P     P I GHE AGVV  VG GV+ ++VGD V+ +    CG C  CR   
Sbjct: 16  LHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELC 75

Query: 72  SNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 131
                L                                 F+EY VV +  +  +     L
Sbjct: 76  PGGGIL--------------------------GEGLDGGFAEYVVVPADNLVPLPDGLSL 109

Query: 132 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191
           ++  +L   ++T   A       + G +V V G G VGL AA+ A+ AGA R+I  DRS 
Sbjct: 110 EEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSD 168

Query: 192 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW 251
           ++ E AK+ G    ++  E D    E +     GG D  ++  G  + +  A   +  G 
Sbjct: 169 EKLELAKELGADHVIDYKEEDLE--EELRLTGGGGADVVIDAVGGPETLAQALRLLRPG- 225

Query: 252 GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMY 300
           G  V+VG  S           +  E T+ G+  G  +   D    +D+ 
Sbjct: 226 GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTRE---DFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  163 bits (416), Expect = 8e-48
 Identities = 92/321 (28%), Positives = 139/321 (43%), Gaps = 51/321 (15%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRSDVSNMCDLLR 79
            P + GHE +G VE VG GV DL VGD V     LP     CG C +C+    ++C    
Sbjct: 52  PPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLP-----CGKCEYCKKGEYSLCS--- 103

Query: 80  INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC 139
            N     +   G  R                F+EY  V +  + KI    P D V     
Sbjct: 104 -N--YDYI---GSRRDG-------------AFAEYVSVPARNLIKI----P-DHVDYEEA 139

Query: 140 G----VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 195
                 +  L A + +A    G +V V G G +GL A +  +I GA R+I VD   ++  
Sbjct: 140 AMIEPAAVALHA-VRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLA 198

Query: 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVA 254
            A++ G  D +N  E D    E + E+T G G D  +E  G+   +  A      G G  
Sbjct: 199 VARELGADDTINPKEED---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKV 254

Query: 255 VLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRT--DLPSVVDMYMNKQLELEKF 310
           VLVG+P  D     +     +  E T++G++     P    +  + +D+  + ++++E  
Sbjct: 255 VLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPL 314

Query: 311 ITHRIPFSEINKAFEYMVKGE 331
           ITHR+P  +   AFE +   E
Sbjct: 315 ITHRLPLEDGPAAFERLADRE 335

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  160 bits (407), Expect = 2e-46
 Identities = 95/321 (29%), Positives = 147/321 (45%), Gaps = 47/321 (14%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRI 80
            P + GHE AGVV +VG  V+  +VGD V      +    CG+C +CR    N+C+ L  
Sbjct: 52  PPLVPGHEFAGVVVAVGSKVTGFKVGDRV----AVDPNIYCGECFYCRRGRPNLCENLT- 106

Query: 81  NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCI--L 137
               GV    G                   F+EY VV +  V KI + L+  +      L
Sbjct: 107 --AVGVTRNGG-------------------FAEYVVVPAKQVYKIPDNLSFEEAALAEPL 145

Query: 138 SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197
           SC V    G  L++   + G SV VFG G +GL  A+  ++ GASR+   + + ++ E A
Sbjct: 146 SCAVH---G--LDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA 200

Query: 198 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257
           KK G T+ V+ S  D    E   E    G D  +E TG    +  A E    G G  ++ 
Sbjct: 201 KKLGATETVDPSRED---PEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVF 256

Query: 258 GVPSKDAVFMTKPINVLN-ERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316
           GV + DA     P  +   E T+ G+F   Y      P  + +  + +++++  ++HR+P
Sbjct: 257 GVYAPDARVSISPFEIFQKELTIIGSFINPYT----FPRAIALLESGKIDVKGLVSHRLP 312

Query: 317 FSEINKAFEYMVKGEGLRCII 337
             E+ +A E M  G  L+ ++
Sbjct: 313 LEEVPEALEGMRSGGALKVVV 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  157 bits (399), Expect = 3e-45
 Identities = 102/312 (32%), Positives = 133/312 (42%), Gaps = 33/312 (10%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
              I GHE  G V  VG  V  L+ GD V       CG CR CR      C         
Sbjct: 54  HGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHC--------- 104

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH--SGCVAKINPLAPLDKVCILSCGVS 142
              L   +    I+G            +EY  V      +AKI    P +   +LS  + 
Sbjct: 105 ENGLWGWKLGNRIDG----------GQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILP 154

Query: 143 TGL-GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
           TG  GA L   KP  GS+VAV G G VGL A  GAR+ GA+RII VD + +R + AK+ G
Sbjct: 155 TGFHGAELAGIKP--GSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAG 212

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
            TD +N    D  I E I E+T G GVD  +E  G  +    A + V  G G    VGV 
Sbjct: 213 ATDIINPKNGD--IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVY 269

Query: 261 -SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319
              D + +       N  T K         R  +P ++D+    +++  K ITHR P  +
Sbjct: 270 GKPDPLPLLGEWFGKN-LTFKTGLVPV---RARMPELLDLIEEGKIDPSKLITHRFPLDD 325

Query: 320 INKAFEYMVKGE 331
           I KA+       
Sbjct: 326 ILKAYRLFDNKP 337

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  155 bits (395), Expect = 1e-44
 Identities = 92/303 (30%), Positives = 142/303 (46%), Gaps = 32/303 (10%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P   GHE +GVV  VG GV+  +VGD V+   T +CG C  C+  + N+CD   +  + 
Sbjct: 64  APVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCD--SLGFI- 120

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           G+    G                   F+EY VV +  V K+    PL+    L   ++  
Sbjct: 121 GLGGGGG------------------GFAEYVVVPAYHVHKLPDNVPLE-EAALVEPLAVA 161

Query: 145 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 204
             A +  +  + G +  V G G +GL      + AGAS+II  + S  R E A++ G T 
Sbjct: 162 WHA-VRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATI 220

Query: 205 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 263
            ++ +E D  +   + ++T G GVD S +C G    + +A + +    G AV V +  K 
Sbjct: 221 VLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP 277

Query: 264 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI-NK 322
             F    + VL E+TL G+    Y  R D   V+D+  + +++ E  IT RIP  +I  K
Sbjct: 278 ISFNPNDL-VLKEKTLTGSI--CY-TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEK 333

Query: 323 AFE 325
            FE
Sbjct: 334 GFE 336

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  153 bits (389), Expect = 8e-44
 Identities = 102/320 (31%), Positives = 149/320 (46%), Gaps = 40/320 (12%)

Query: 18  FQGQTPLF--PRIFGHEAAGVVESVGEGVSDLEVGDHV--LPVFTGECGDCRHCRSDVSN 73
           + G+ P    PRI GHE +G V  VGEGV+ L+VGD V   P     CG+C  CR    N
Sbjct: 44  YHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPN 101

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
            C+ L+   V GV   DG                   F+EY VV +  +  +     LD+
Sbjct: 102 CCENLQ---VLGVH-RDG------------------GFAEYIVVPADAL-LVPEGLSLDQ 138

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
             ++   ++ G  A    A    G +V V G G +GL   + A+  GA R+I VD   +R
Sbjct: 139 AALVEP-LAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDER 195

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWG 252
            E A++ G  D +N  + D  +   + E+T+G G D  ++ TGN  +M  A E V  G G
Sbjct: 196 LEFARELGADDTINVGDED--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-G 252

Query: 253 VAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 312
             VLVG+      F         E T+ G+       R D P V+D+  + +++ E  IT
Sbjct: 253 RVVLVGLSKGPVTFPDPEF-HKKELTILGSRNAT---REDFPDVIDLLESGKVDPEALIT 308

Query: 313 HRIPFSEINKAFEYMVKGEG 332
           HR PF ++ +AF+      G
Sbjct: 309 HRFPFEDVPEAFDLWEAPPG 328

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  151 bits (383), Expect = 6e-43
 Identities = 92/348 (26%), Positives = 139/348 (39%), Gaps = 93/348 (26%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRSDVSNMCDLLRI 80
           P + GHE+AG V +VG GV+ L+VGD V     +P     C  C  C+S   N+C     
Sbjct: 55  PMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLC----- 104

Query: 81  NPVRGVMLADGQSRFSINGEPVNHFLGTS----TFSEYTVVHSGCVAKIN---------- 126
                               P   F  T     T   Y    +    K+           
Sbjct: 105 --------------------PDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGAL 144

Query: 127 --PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRI 184
             PL+    V + +C            A    G +V VFG G +GL  A  A+  GA+++
Sbjct: 145 VEPLS----VGVHAC----------RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKV 190

Query: 185 IGVDRSSKRFEEAKKFGVTDFVNTSEHDRP-IQEVIAEMTNG-GVDRSVECTGNIDNMIS 242
           +  D    R E AK+ G T  VN    D P   E IAE+  G G D  +ECTG       
Sbjct: 191 VVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTG------- 243

Query: 243 AFECVHDGW------GVAVLVGVPSKDAVFMTKPINVLNER--TLKGTF-FGNYKPRTDL 293
           A  C+          G  VLVG+   +      P++  + R   ++G F + N       
Sbjct: 244 AESCIQTAIYATRPGGTVVLVGMGKPEVTL---PLSAASLREIDIRGVFRYAN-----TY 295

Query: 294 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG--EGLRCIISM 339
           P+ +++  + +++++  ITHR P  +  +AFE   KG    ++ +I  
Sbjct: 296 PTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIEG 343

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  150 bits (380), Expect = 1e-42
 Identities = 91/334 (27%), Positives = 143/334 (42%), Gaps = 51/334 (15%)

Query: 18  FQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCD 76
                   PRI GHE AG +  VG+GV+  +VGD V  V     CG+C +C     NMC 
Sbjct: 46  GGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVF-VAPHVPCGECHYCLRGNENMCP 104

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK--INPLAPLDKV 134
             +        L DG                   F+EY  V +  V +  +  L   D V
Sbjct: 105 NYKK----FGNLYDG------------------GFAEYVRVPAWAVKRGGVLKLP--DNV 140

Query: 135 CI--------LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIG 186
                     L+C +          A  + G +V V G G +GL  A  A+ +GA ++I 
Sbjct: 141 SFEEAALVEPLACCI-----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIV 195

Query: 187 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 245
            D +  R E AKK G    ++ +E D    E + E+T+G G D  +  TG+ +    A E
Sbjct: 196 SDLNEFRLEFAKKLGADYTIDAAEEDLV--EKVRELTDGRGADVVIVATGSPEAQAQALE 253

Query: 246 CVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNK 303
            V  G G  +  G   K +  +    N++   E T+ G++        D    +++  + 
Sbjct: 254 LVRKG-GRILFFGGLPKGS-TVNIDPNLIHYREITITGSY---AASPEDYKEALELIASG 308

Query: 304 QLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 337
           +++++  ITHR P  +I +AFE    G+ L+ +I
Sbjct: 309 KIDVKDLITHRFPLEDIEEAFELAADGKSLKIVI 342

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  148 bits (375), Expect = 8e-42
 Identities = 99/321 (30%), Positives = 146/321 (45%), Gaps = 42/321 (13%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           P  P I GHE  G V  VGEGV+ L+VGD V +      CG+C +CRS   N+C   +I 
Sbjct: 55  PKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI- 113

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
                      + ++ +G           ++EY VV +  V KI     L +   L C  
Sbjct: 114 -----------TGYTTDG----------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAG 152

Query: 142 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
            T   A L  A  + G  VAV G G +G  A + A+  GA  +I + RS ++ E AKK G
Sbjct: 153 ITTYRA-LKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLG 210

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
               +N+S+ D    E + E+     D  ++  G    +  + + +  G G  VLVG+P 
Sbjct: 211 ADHVINSSDSDAL--EAVKEI----ADAIIDTVGPAT-LEPSLKALRRG-GTLVLVGLPG 262

Query: 262 KDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319
                   P    +L E ++ G+  G    R DL   +D     +++ E  I   IP  E
Sbjct: 263 GGP-IPLLPAFLLILKEISIVGSLVGT---RADLEEALDFAAEGKIKPE--ILETIPLDE 316

Query: 320 INKAFEYMVKGEGL-RCIISM 339
           IN+A+E M KG+   R +I M
Sbjct: 317 INEAYERMEKGKVRGRAVIDM 337

Length = 339

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  145 bits (368), Expect = 7e-41
 Identities = 87/307 (28%), Positives = 125/307 (40%), Gaps = 33/307 (10%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
           P   GHE AG V  VG GV++ +VGD V       CG C  CR    N+C          
Sbjct: 57  PLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC---------- 106

Query: 86  VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 145
             L  G     I+G           F+EY VV +  +  +    P  +  + +  V T  
Sbjct: 107 --LNQGMPGLGIDG----------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPY 154

Query: 146 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 205
            A +   + + G +V V GLG +GL A + A+  GA  +I VD   ++ E AK+ G  D 
Sbjct: 155 HAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGA-DE 212

Query: 206 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 265
           V  S  D P  +  A    GG D   +  G       A + V  G G  V+VG+      
Sbjct: 213 VLNSLDDSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLT 270

Query: 266 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFE 325
                + +  E  + G+F G      DLP V+D+    +L          P  EI +  E
Sbjct: 271 VDLSDL-IARELRIIGSFGG---TPEDLPEVLDLIAKGKL---DPQVETRPLDEIPEVLE 323

Query: 326 YMVKGEG 332
            + KG+ 
Sbjct: 324 RLHKGKV 330

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  143 bits (364), Expect = 3e-40
 Identities = 94/315 (29%), Positives = 134/315 (42%), Gaps = 35/315 (11%)

Query: 28  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 87
           I GHE AGVV +VG GV+   VGD V+      CG CR+CR     +C            
Sbjct: 57  IPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCT----------- 105

Query: 88  LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 147
                     +      +      +EY +V    +  +          +L CG+ T   A
Sbjct: 106 ----------SKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHA 155

Query: 148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 207
            L         +V V G G VGL A   AR  GA  +IGVD S +R E AK  G  DFV 
Sbjct: 156 -LRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGA-DFVI 213

Query: 208 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 266
            S  D    + I E+T+G G D ++EC+GN      A E V   WG  VLVG   +    
Sbjct: 214 NSGQDDV--QEIRELTSGAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGEGGE---L 267

Query: 267 MTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
             +  N L   +RTL G++   Y    D+    +     +LE+++ +THR    +  +A+
Sbjct: 268 TIEVSNDLIRKQRTLIGSW---YFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAY 324

Query: 325 EYMVKGEGLRCIISM 339
               +GE  + +   
Sbjct: 325 ALFAQGESGKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  143 bits (363), Expect = 5e-40
 Identities = 92/320 (28%), Positives = 137/320 (42%), Gaps = 40/320 (12%)

Query: 17  GFQGQTPL--FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 74
           G+QG  P    P + GHE AGVV  VGE VS   VGD V   F   CG C +CR+  SN+
Sbjct: 44  GWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNV 103

Query: 75  CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 134
           C+               Q  F+  G          +F+EY  V     A +N +   D V
Sbjct: 104 CEHQV------------QPGFTHPG----------SFAEYVAVPR---ADVNLVRLPDDV 138

Query: 135 -----CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 189
                  L C  +T   A ++ A+ + G  VAV G G VGL+A   A   GA R+I VD 
Sbjct: 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDI 197

Query: 190 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 249
              + E A++ G    VN SE +      + ++T GG   SV+  G  +   ++   +  
Sbjct: 198 DDDKLELARELGAVATVNASEVEDV-AAAVRDLTGGGAHVSVDALGIPETCRNSVASLRK 256

Query: 250 GWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL 307
             G  V VG+   +   +  P++  V  E  + G+  G   P     +++ +  + +L+ 
Sbjct: 257 R-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGS-HGM--PAHRYDAMLALIASGKLDP 312

Query: 308 EKFITHRIPFSEINKAFEYM 327
           E  +   I   E   A   M
Sbjct: 313 EPLVGRTISLDEAPDALAAM 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  142 bits (361), Expect = 1e-39
 Identities = 85/326 (26%), Positives = 136/326 (41%), Gaps = 33/326 (10%)

Query: 25  FPRIFGHEAAGVVESVGEGVSD------LEVGDHVL-PVFTGECGDCRHCRSDVSNMCDL 77
            P I GHE  G V ++G GV+       L+VGD V   V    CG C  C       C+ 
Sbjct: 54  LPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAP-CGRCYRCLVGDPTKCEN 112

Query: 78  LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-VAKINPLAPLDKVCI 136
            +                    +P  H  G   ++E+  +  G  + ++    P +    
Sbjct: 113 RKK-----YGHEAS------CDDP--HLSGG--YAEHIYLPPGTAIVRVPDNVPDEVAAP 157

Query: 137 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 196
            +C ++T L A         G +V V G G +GL A   A++AGA R+I +D S +R E 
Sbjct: 158 ANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLEL 217

Query: 197 AKKFGVTDFVNTSEH-DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVA 254
           A++FG    ++  E  D   + ++ ++T G G D  +E +G+   +    E +  G G  
Sbjct: 218 AREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTY 276

Query: 255 VLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPR--TDLPSVVDMYMNKQLELEKFI 311
           VLVG  +        P   V    T+ G    NY P         ++   ++     + +
Sbjct: 277 VLVGSVAPAGTVPLDPERIVRKNLTIIGVH--NYDPSHLYRAVRFLERTQDRFP-FAELV 333

Query: 312 THRIPFSEINKAFEYMVKGEGLRCII 337
           THR P  +IN+A E    G  L+ +I
Sbjct: 334 THRYPLEDINEALELAESGTALKVVI 359

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  143 bits (362), Expect = 2e-39
 Identities = 99/329 (30%), Positives = 147/329 (44%), Gaps = 46/329 (13%)

Query: 28  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 87
           I GHE  GVVE VG  V +L+VGD V+  FT  CG+C +C+  + + CD    NP   + 
Sbjct: 57  ILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCD--NTNPSAEMA 114

Query: 88  LADGQSRFSINGEPVNHFLG--TSTFSEYTVV---HSGCVAKINPLAPLDKVCILSCGVS 142
              G +   I G    H  G      +EY  V     G   KI      +K   LS  + 
Sbjct: 115 KLYGHAGAGIFGYS--HLTGGYAGGQAEYVRVPFADVGPF-KIPDDLSDEKALFLSDILP 171

Query: 143 TGL-GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
           TG   A L   KP  G +VAV+G G VGL AA  A++ GA R+I +DR  +R E A+   
Sbjct: 172 TGYHAAELAEVKP--GDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHL 229

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC---------------------TGNIDN 239
             + +N  E D  + E + E+T G G D  ++                      T   D 
Sbjct: 230 GAETINFEEVDDVV-EALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDA 288

Query: 240 MISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNER--TLKGTFFGNYKPRTDLPSV 296
           +  A + V  G G   ++GV       + K PI     +  TL+    G    +  LP +
Sbjct: 289 LREAIQAVRKG-GTVSIIGVY---GGTVNKFPIGAAMNKGLTLRM---GQTHVQRYLPRL 341

Query: 297 VDMYMNKQLELEKFITHRIPFSEINKAFE 325
           +++  + +L+    ITHR+P  +  +A++
Sbjct: 342 LELIESGELDPSFIITHRLPLEDAPEAYK 370

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  140 bits (356), Expect = 6e-39
 Identities = 88/316 (27%), Positives = 127/316 (40%), Gaps = 48/316 (15%)

Query: 27  RIFGHEAAGVVESVGEGVSDLEVGDHVL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
            I GHEA GVVE VG  V D + GD V+ P  T         +    +           G
Sbjct: 55  MILGHEAVGVVEEVGSEVKDFKPGDRVIVPAIT-PDWRSVAAQRGYPSQS---------G 104

Query: 86  VMLADGQSRFS--INGEPVNHFLGTSTFSEYTVVHS--GCVAKINPLAPLDKVCILSCGV 141
            ML  G  +FS   +G           F+EY  V+     +A +      ++  +L   +
Sbjct: 105 GML--GGWKFSNFKDG----------VFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM 152

Query: 142 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
           STG       A  + G +VAVFG+G VGL A  GAR+ GA RII V     R E AK++G
Sbjct: 153 STGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYG 211

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
            TD V+    +  + E I ++T G GVD  +   G  D    A + +  G G    V   
Sbjct: 212 ATDIVDY--KNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYY 268

Query: 261 SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDL--------PSVVDMYMNKQLELEKFIT 312
            +D         +   R   G   G+      L          +  +    +++  K +T
Sbjct: 269 GEDDY-------LPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLT 321

Query: 313 HRI-PFSEINKAFEYM 327
           H    F +I +A   M
Sbjct: 322 HHFFGFDDIEEALMLM 337

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  133 bits (336), Expect = 3e-36
 Identities = 93/326 (28%), Positives = 138/326 (42%), Gaps = 31/326 (9%)

Query: 17  GFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
           G    TP F  + GHE  G V  VG  V  L+VGD V+  FT  CG+C +CR   S  C 
Sbjct: 47  GHIPSTPGF--VLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCA 104

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV--HSGCVAKINPLAPLDKV 134
                  +G +     S  +++G            +EY  V    G + K+      +  
Sbjct: 105 -------KGGLFGYAGSP-NLDGAQ----------AEYVRVPFADGTLLKLPDGLSDEAA 146

Query: 135 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 194
            +L   + TG       A+   G +VAV G G VGL A   A++ GA+R+  VD   +R 
Sbjct: 147 LLLGDILPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERL 205

Query: 195 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 253
           E A   G        E   P++ V  E T G G D  +E  G    +  AF+ V    GV
Sbjct: 206 ERAAALGAE--PINFEDAEPVERV-REATEGRGADVVLEAVGGAAALDLAFDLVRP-GGV 261

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
              VGV + +              TL+   FG    R+  P ++ +  + +L+LE  I H
Sbjct: 262 ISSVGVHTAEEFPFPGLDAYNKNLTLR---FGRCPVRSLFPELLPLLESGRLDLEFLIDH 318

Query: 314 RIPFSEINKAFEYMVKGEGLRCIISM 339
           R+P  E  +A+    K + L+ ++  
Sbjct: 319 RMPLEEAPEAYRLFDKRKVLKVVLDP 344

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  129 bits (326), Expect = 1e-34
 Identities = 95/323 (29%), Positives = 139/323 (43%), Gaps = 64/323 (19%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRIN 81
           P IFGHE AG V  VGEGV+ ++VGD+V    + E    CG C  CR+   ++C   +I 
Sbjct: 58  PLIFGHEFAGEVVEVGEGVTRVKVGDYV----SAETHIVCGKCYQCRTGNYHVCQNTKI- 112

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LS 138
              GV           +G           F+EY VV    + K +   P +   I   L 
Sbjct: 113 --LGV---------DTDG----------CFAEYVVVPEENLWKNDKDIPPEIASIQEPLG 151

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
             V T L   +       G SV + G G +GL A   A+ AGAS +I  D +  R E AK
Sbjct: 152 NAVHTVLAGDV------SGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK 205

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
           K G    +N  E D  + EV +     GVD  +E +GN   +    + +  G G   ++G
Sbjct: 206 KMGADVVINPREED--VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILG 262

Query: 259 VPSKDAVFMTKPINVLNERTLKG-TFFGN---------YKPRTDLPSVVDMYMNKQLELE 308
           +P          I++ N    KG T  G          Y+       V  +  + +++L 
Sbjct: 263 LPPGPV-----DIDLNNLVIFKGLTVQGITGRKMFETWYQ-------VSALLKSGKVDLS 310

Query: 309 KFITHRIPFSEINKAFEYMVKGE 331
             ITH++P  +  +AFE M  G+
Sbjct: 311 PVITHKLPLEDFEEAFELMRSGK 333

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  117 bits (296), Expect = 2e-30
 Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 52/319 (16%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRI 80
              P   GHE AG VE VG GV  L+ GD V+  P +   CG CR+CR    N C+  R 
Sbjct: 55  YKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWG--CGTCRYCRRGEENYCENARF 112

Query: 81  NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC- 139
                            +G           F+EY +V S  + K+       +   L+  
Sbjct: 113 PG------------IGTDG----------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADA 150

Query: 140 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 199
           G++        +   + GS+V V G+G +G  A +  R    + +I VDRS +  + A++
Sbjct: 151 GLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAER 210

Query: 200 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
            G    +N S+      E + E+T G G D  ++  G+ + +  A + +  G G  V+VG
Sbjct: 211 LGADHVLNASDDVV---EEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVG 266

Query: 259 ------VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 312
                 +P+ D V          E ++ G+ +G      +L  VV +  + ++++E    
Sbjct: 267 YGGHGRLPTSDLVPT--------EISVIGSLWGTR---AELVEVVALAESGKVKVE---I 312

Query: 313 HRIPFSEINKAFEYMVKGE 331
            + P  + N+A + + +G 
Sbjct: 313 TKFPLEDANEALDRLREGR 331

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  116 bits (292), Expect = 8e-30
 Identities = 96/308 (31%), Positives = 135/308 (43%), Gaps = 44/308 (14%)

Query: 27  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 86
           RI GHE  GVVE VG  V++ +VGD VL      CG C +CR  + + C           
Sbjct: 56  RILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHC----------- 104

Query: 87  MLADGQSRF--SINGEPVNHFLGTSTFSEYT-VVHS-GCVAKINPLAPLDKVCILSCGVS 142
               G       I+G          T +EY  + H+   + K+      +   +LS  + 
Sbjct: 105 --ESGGWILGNLIDG----------TQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILP 152

Query: 143 TGL-GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
           TG     LN  K + G +VA+ G G VGLAA   A++   S+II VD    R E AKK G
Sbjct: 153 TGYECGVLN-GKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLG 211

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
            T  VN+++ D    E + E+T+G GVD  +E  G         E V  G G    VGV 
Sbjct: 212 ATHTVNSAKGD--AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVH 268

Query: 261 SKDAVF-MTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317
            K     + K    N+     L  T           P ++ +  + +L+  K +THR   
Sbjct: 269 GKPVDLHLEKLWIKNITITTGLVDT--------NTTPMLLKLVSSGKLDPSKLVTHRFKL 320

Query: 318 SEINKAFE 325
           SEI KA++
Sbjct: 321 SEIEKAYD 328

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  116 bits (294), Expect = 8e-30
 Identities = 75/242 (30%), Positives = 108/242 (44%), Gaps = 51/242 (21%)

Query: 22  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
                 + GHEA G VE VG  V  L+VGD V+  F   CG CR+C+  ++ +C  L +N
Sbjct: 50  GAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVC--LTVN 107

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI----- 136
           P R      G +   ++  P   + G    +EY  V         P A  D   +     
Sbjct: 108 PGR-----AGGAYGYVDMGP---YGGGQ--AEYLRV---------PYA--DFNLLKLPDR 146

Query: 137 -----------LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRII 185
                      LS    TG      +A  + G +VAVFG G VGL AA  A + GASR+ 
Sbjct: 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVY 205

Query: 186 GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFE 245
            VD   +R + A+  G    ++ S+ D P+++ I  +  GGVDR+V+C G        +E
Sbjct: 206 VVDHVPERLDLAESIGAIP-IDFSDGD-PVEQ-ILGLEPGGVDRAVDCVG--------YE 254

Query: 246 CV 247
             
Sbjct: 255 AR 256

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  115 bits (291), Expect = 1e-29
 Identities = 85/321 (26%), Positives = 128/321 (39%), Gaps = 48/321 (14%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLL 78
              P  P I GHE AGVV +VG GVS L+VGD V +      CG C +CR+    +C   
Sbjct: 51  PVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCP-- 108

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
                         S ++++G          TF+EY +  +  V  I      ++   L 
Sbjct: 109 ----------NQKNSGYTVDG----------TFAEYAIADARYVTPIPDGLSFEQAAPLL 148

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLG------AVGLAAAEGARIAGASRIIGVDRSSK 192
           C   T   A L  A  + G  V + G G       V  A A G       R+I +D   +
Sbjct: 149 CAGVTVYKA-LKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL------RVIAIDVGDE 201

Query: 193 RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG 252
           + E AK+ G   FV+  + D  ++ V      GG    V    +      A + +  G G
Sbjct: 202 KLELAKELGADAFVDFKKSD-DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-G 259

Query: 253 VAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 310
             V VG+P     F+       VL   T+ G+  G    R DL   ++     ++   K 
Sbjct: 260 TLVCVGLPPGG--FIPLDPFDLVLRGITIVGSLVGT---RQDLQEALEFAARGKV---KP 311

Query: 311 ITHRIPFSEINKAFEYMVKGE 331
               +P  ++N+ FE M +G+
Sbjct: 312 HIQVVPLEDLNEVFEKMEEGK 332

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  113 bits (286), Expect = 6e-29
 Identities = 91/312 (29%), Positives = 128/312 (41%), Gaps = 25/312 (8%)

Query: 18  FQGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
           ++G +P   P   GHE  GVVE VG  V+ ++ GD V+  F    G C  CR+  +  C 
Sbjct: 45  YRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCV 104

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI 136
                   G  +  GQ      GE V   L   T  +     S     +  L  L  V  
Sbjct: 105 HGG---FWGAFVDGGQ------GEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDV-- 153

Query: 137 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 196
               + TG  A +  A    GS+V V G GAVGL A   A+  GA RII + R   R   
Sbjct: 154 ----MGTGHHAAV-SAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQAL 208

Query: 197 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAV 255
           A++FG TD V     +  +  V  E+T G G D  +EC G  ++M  A      G G   
Sbjct: 209 AREFGATDIV-AERGEEAVARVR-ELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVG 265

Query: 256 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 315
            VGVP        + +   N   L G   G    R  LP ++D  +  ++   +     +
Sbjct: 266 YVGVPHGGVELDVRELFFRN-VGLAG---GPAPVRRYLPELLDDVLAGRINPGRVFDLTL 321

Query: 316 PFSEINKAFEYM 327
           P  E+ + +  M
Sbjct: 322 PLDEVAEGYRAM 333

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  112 bits (282), Expect = 3e-28
 Identities = 82/305 (26%), Positives = 126/305 (41%), Gaps = 39/305 (12%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPV 83
            P + GHE  G V +VG   +D++VGD VL V+    CG+C  C +   N+C   R    
Sbjct: 66  LPLVLGHEIVGEVVAVGPDAADVKVGDKVL-VYPWIGCGECPVCLAGDENLCAKGRAL-- 122

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVS 142
            G+    G                   ++EY +V HS  +     L        L+C   
Sbjct: 123 -GIFQDGG-------------------YAEYVIVPHSRYLVDPGGL-DPALAATLACSGL 161

Query: 143 TGLGA--TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 200
           T   A   L     +    V + G G +GL A    +  G + II VD    + E AK  
Sbjct: 162 TAYSAVKKLMPLVADE--PVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA 219

Query: 201 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
           G    VN S+ D   +  I +   GGVD  ++   N      AF+ +  G G  VLVG+ 
Sbjct: 220 GADVVVNGSDPDAAKR--IIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLF 276

Query: 261 SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 320
             +A     P+  L   T++G++ G+     +L  +V +   K  +L+       P S++
Sbjct: 277 GGEATLPL-PLLPLRALTIQGSYVGSL---EELRELVALA--KAGKLKPIPLTERPLSDV 330

Query: 321 NKAFE 325
           N A +
Sbjct: 331 NDALD 335

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  104 bits (261), Expect = 2e-27
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 5/134 (3%)

Query: 167 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 225
            VGLAA + A+  GA+R+I VDRS ++ E AK+ G    +N  + D    E + E+T G 
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED--FVERVRELTGGR 58

Query: 226 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 285
           GVD  ++C G    +  A E +  G G  V+VG+P    V       +L E T+ G+  G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPG-GRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGG 117

Query: 286 NYK-PRTDLPSVVD 298
             +     L  +  
Sbjct: 118 GREEFEEALELLAS 131

Length = 131

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  109 bits (273), Expect = 3e-27
 Identities = 95/324 (29%), Positives = 145/324 (44%), Gaps = 51/324 (15%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRIN 81
           P++ GHE AG V  +G GV  ++VGD+V    + E    CG C  CR    ++C   +I 
Sbjct: 56  PQVVGHEVAGEVVGIGPGVEGIKVGDYV----SVETHIVCGKCYACRRGQYHVCQNTKI- 110

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LS 138
                        F ++ +          F+EY VV +  + K     P +   I   L 
Sbjct: 111 -------------FGVDTDGC--------FAEYAVVPAQNIWKNPKSIPPEYATIQEPLG 149

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
             V T L      A P  G SV V G G +GL A   A+ +GA  +I  D +  R E AK
Sbjct: 150 NAVHTVL------AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK 203

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257
           K G T  VN  + D  + + +A++T+G GVD  +E +G    +    + V  G  V++L 
Sbjct: 204 KMGATYVVNPFKED--VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLL- 260

Query: 258 GVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPS---VVDMYMNKQLELEKFITHR 314
           G+P      +T  I+  N+   KG        R    +   V  +  + +L+L+  ITH+
Sbjct: 261 GLPPGK---VT--IDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHK 315

Query: 315 IPFSEINKAFEYMVKGEGLRCIIS 338
             F +  K FE M  G+  + I+S
Sbjct: 316 FKFDKFEKGFELMRSGQTGKVILS 339

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  108 bits (273), Expect = 4e-27
 Identities = 93/327 (28%), Positives = 141/327 (43%), Gaps = 71/327 (21%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRIN 81
           P + GHE  G V  VG  V+  +VGD V    +GE    CG CR+CR+   ++C     N
Sbjct: 58  PMVVGHEFVGEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLC----RN 109

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LS 138
             +GV            G  VN       F+EY V+ +  V KI    P D   I     
Sbjct: 110 -TKGV------------G--VNR---PGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFG 151

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
             V T L  + ++     G  V + G G +G+ AA  A+  GA  ++  D +  R E A+
Sbjct: 152 NAVHTAL--SFDLV----GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR 205

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257
           K G T  VN ++ D  +++V+AE+    G D  +E +G         + ++ G  +A+L 
Sbjct: 206 KMGATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAML- 262

Query: 258 GVPSKDAVFMTKPIN----VLNERTLKG--------TFFGNYKPRTDLPSVVDMYMNKQL 305
           G+P  D       I+    +    T+KG        T+   YK       +  +  +  L
Sbjct: 263 GIPPGDM-----AIDWNKVIFKGLTIKGIYGREMFETW---YK-------MSALLQSG-L 306

Query: 306 ELEKFITHRIPFSEINKAFEYMVKGEG 332
           +L   ITHR P  +  K FE M  G+ 
Sbjct: 307 DLSPIITHRFPIDDFQKGFEAMRSGQS 333

Length = 341

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  106 bits (266), Expect = 6e-26
 Identities = 91/317 (28%), Positives = 131/317 (41%), Gaps = 48/317 (15%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           FP + GHE +GVVE  G+ V + E GD V       CG CR CRS   N C  L      
Sbjct: 87  FPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNL------ 140

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL---DK---VCILS 138
                  +  FS +G           F+EY  V++    +IN L  +   DK      L 
Sbjct: 141 ------KELGFSADG----------AFAEYIAVNARYAWEINELREIYSEDKAFEAGALV 184

Query: 139 CGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 195
              S             +P  G+ V V+G G +GLAA   A+ AGAS++I  + S +R  
Sbjct: 185 EPTSVAYNGLFIRGGGFRP--GAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRN 242

Query: 196 EAKKFGVTDFVNTSE-HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 253
            AK+ G     N ++  D    E + E+T G G D  VE  G     I   E      G 
Sbjct: 243 LAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGK 302

Query: 254 AVLVG-----VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE 308
            V +G     VP    V   +   ++  +   G   G +      PSV+ +  + ++++ 
Sbjct: 303 IVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSG--HGIF------PSVIKLMASGKIDMT 354

Query: 309 KFITHRIPFSEINKAFE 325
           K IT R P   I +A +
Sbjct: 355 KIITARFPLEGIMEAIK 371

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  103 bits (259), Expect = 2e-25
 Identities = 73/265 (27%), Positives = 118/265 (44%), Gaps = 36/265 (13%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE-CGDCRHCRSDVSNMCDLLRINPV 83
            P + GHE +G +  VG  V   +VGD V+   T   CG C +CR    N+C      P 
Sbjct: 55  TPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLC------PH 108

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCG 140
           R      G      +G           F+EY +V    + ++     L+   +   L+  
Sbjct: 109 R---KGIG---TQADG----------GFAEYVLVPEESLHELPENLSLEAAALTEPLAVA 152

Query: 141 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRII-GVDRSSKRFEEAKK 199
           V     A    +    G +V VFG G +GL AA+ A++ GA+ ++ G ++   R + AK+
Sbjct: 153 VH----AVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKE 208

Query: 200 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
            G    VN  E D  + E++ E+T+G G D  +EC+G +  +  A E +  G G  V VG
Sbjct: 209 LGADA-VNGGEED--LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVG 264

Query: 259 VPSKDAVFMTKPINVLNERTLKGTF 283
           +    A  +     +  E ++ G+ 
Sbjct: 265 IFGPLAASIDVERIIQKELSVIGSR 289

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  103 bits (259), Expect = 4e-25
 Identities = 85/327 (25%), Positives = 117/327 (35%), Gaps = 83/327 (25%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRSDVSNMCDLLRI 80
           P + GHE +GVVE+VG GV+ L  G  V      P     CG C +CR+   N+C  +R 
Sbjct: 54  PMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRP-----CGTCDYCRAGRPNLCLNMR- 107

Query: 81  NPVRGVMLADGQSRFSINGEPVNHFLGTST--------FSEYTVVH-SGCVAKINPLAPL 131
                                   FLG++         F EY VV  S CV         
Sbjct: 108 ------------------------FLGSAMRFPHVQGGFREYLVVDASQCVP-------- 135

Query: 132 DKVCILSCGVSTGLGA----------TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA 181
                L  G+S    A           +N A    G  V V G G +G      AR AGA
Sbjct: 136 -----LPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGA 190

Query: 182 SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMI 241
           + I+  D +      A+  G  + VN +               G  D   E +G    + 
Sbjct: 191 AEIVATDLADAPLAVARAMGADETVNLARDP----LAAYAADKGDFDVVFEASGAPAALA 246

Query: 242 SAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTF-FGNYKPRTDLPSVVD 298
           SA   V  G G  V VG+          P+N L   E  L+G+F F       +    V 
Sbjct: 247 SALRVVRPG-GTVVQVGMLGGPVPL---PLNALVAKELDLRGSFRFD-----DEFAEAVR 297

Query: 299 MYMNKQLELEKFITHRIPFSEINKAFE 325
           +    ++++   IT   P  E  +AF 
Sbjct: 298 LLAAGRIDVRPLITAVFPLEEAAEAFA 324

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  102 bits (255), Expect = 8e-25
 Identities = 79/311 (25%), Positives = 124/311 (39%), Gaps = 40/311 (12%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRIN 81
             +P + GHE  G V  VG GV   +VGD V +    G CG C +CR  + N+C      
Sbjct: 51  SKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT 110

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
                        ++  G           ++EY V  +     +    PL +   L C  
Sbjct: 111 G------------YTTQG----------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAG 148

Query: 142 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
            T   A L  A P  G  VAV G+G +G  A + AR  G    + + RS  + E A+K G
Sbjct: 149 ITVYSA-LRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLG 206

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
             + V++            +   GG D  +    +     +A   +  G G  VLVG+P 
Sbjct: 207 ADEVVDSGAELD------EQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPE 259

Query: 262 KDA-VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 320
                    P+ ++  +++ G+  G    R DL   +D     ++   K +    P  + 
Sbjct: 260 SPPFSPDIFPL-IMKRQSIAGSTHGG---RADLQEALDFAAEGKV---KPMIETFPLDQA 312

Query: 321 NKAFEYMVKGE 331
           N+A+E M KG+
Sbjct: 313 NEAYERMEKGD 323

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  101 bits (253), Expect = 1e-24
 Identities = 74/318 (23%), Positives = 109/318 (34%), Gaps = 72/318 (22%)

Query: 22  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
            P  P   GHE  G V ++G GV  L VGD V                            
Sbjct: 48  YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA--------------------------- 80

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
                                   L    F+EY +  +     +  L    +        
Sbjct: 81  -----------------------GLSGGAFAEYDLADADHAVPLPSLLD-GQA-----FP 111

Query: 142 STGLGATLNV---AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
              LG  LNV        G +VAV G G +GL   + A  AGA R+I +DR   R   A+
Sbjct: 112 GEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR 171

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257
           + G T+ V        I E + E+T G G D  +E  G+   +  A E V +  G  V+ 
Sbjct: 172 ELGATEVVTDDSEA--IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIF 228

Query: 258 GVPSKDAVFMTKPINV--LNER--TLKGTFFGNYKPRT-DLPSVVDMYMNKQLELEKFIT 312
           G          +P+     N +   L      + +     +   V +  + +L+L   +T
Sbjct: 229 GYHQDG----PRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLT 284

Query: 313 HRIPFSEINKAFEYMVKG 330
           H  P  E+  AFE   + 
Sbjct: 285 HEFPLEELGDAFEAARRR 302

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  100 bits (252), Expect = 3e-24
 Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 38/307 (12%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
           P I GHE  G VE VGEGV   + GD V+  +   CG C +C S   N+C          
Sbjct: 55  PLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA------ 108

Query: 86  VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 145
                        GE V+       F+EY  V    + K+      +   + +C V T +
Sbjct: 109 -----------EYGEEVDGG-----FAEYVKVPERSLVKLPDNVSDESAALAACVVGTAV 152

Query: 146 GATLNVAKPERGSSVAV-FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 204
            A L  A  ++G +V V    G VG+ A + A+  GA R+I V RS ++ +  K+ G   
Sbjct: 153 HA-LKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADY 210

Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
            ++ S+      E + ++  GG D  +E  G    +  +   ++ G G  VL+G  + D 
Sbjct: 211 VIDGSK----FSEDVKKL--GGADVVIELVG-SPTIEESLRSLNKG-GRLVLIGNVTPDP 262

Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
             +   + +L E  + G+       + D+   + +   K+ +++  I   +   +IN+A 
Sbjct: 263 APLRPGLLILKEIRIIGSISAT---KADVEEALKLV--KEGKIKPVIDRVVSLEDINEAL 317

Query: 325 EYMVKGE 331
           E +  G+
Sbjct: 318 EDLKSGK 324

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 99.5 bits (248), Expect = 3e-24
 Identities = 77/282 (27%), Positives = 113/282 (40%), Gaps = 37/282 (13%)

Query: 28  IFGHEAAGVVESVGEGVSD------LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           + GHE  G V ++  G +       L +G  V+   T  CG C  CR  +   CD LR  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLR-- 58

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI-LSCG 140
                    G                +  ++E+  + +G      P    D V     C 
Sbjct: 59  -------KYGHEALDSGWPL------SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105

Query: 141 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 200
            +T + A L  A   +G  V V G G +GL AA  A  AGA+R++  D S  R E A  F
Sbjct: 106 TATVM-AALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF 164

Query: 201 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
           G T     +E +   +         GVD ++E +G    + +  E +  G G AVL G  
Sbjct: 165 GATA---LAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG-- 218

Query: 261 SKDAVFMTKPINVLNERTLKG--TFFG--NYKPRTDLPSVVD 298
              +VF   P+ +  E+ ++   T  G  NY+PR  L   V 
Sbjct: 219 ---SVFPGGPVALDPEQVVRRWLTIRGVHNYEPR-HLDQAVR 256

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 97.6 bits (244), Expect = 4e-23
 Identities = 78/336 (23%), Positives = 120/336 (35%), Gaps = 90/336 (26%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           +P + GHE  G+V +VG  V+  +VGD V +      CG C  C+S     C        
Sbjct: 53  YPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCP------- 105

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 143
                   +   + NG+  +  +    ++++ VV    V KI           L C    
Sbjct: 106 --------KGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA--- 154

Query: 144 GLGATL------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSK 192
             G T+      N   P  G  V V G+G     AV  A A GA       +    RS  
Sbjct: 155 --GITVYSPLKRNGVGP--GKRVGVVGIGGLGHLAVKFAKALGA------EVTAFSRSPS 204

Query: 193 RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV---HD 249
           + E+A K G  +F+ T + +         M         +  G++D +I     V   HD
Sbjct: 205 KKEDALKLGADEFIATKDPE--------AMK--------KAAGSLDLIID---TVSASHD 245

Query: 250 GW----------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 299
                       G  VLVG P +       P+ +   +++ G+  G  K           
Sbjct: 246 -LDPYLSLLKPGGTLVLVGAPEEPLPVPPFPL-IFGRKSVAGSLIGGRK----------- 292

Query: 300 YMNKQLEL--EKFITHRI---PFSEINKAFEYMVKG 330
              + L+   E  I   +   P   IN+A E + KG
Sbjct: 293 ETQEMLDFAAEHGIKPWVEVIPMDGINEALERLEKG 328

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 94.6 bits (236), Expect = 2e-22
 Identities = 74/313 (23%), Positives = 111/313 (35%), Gaps = 79/313 (25%)

Query: 24  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
             P   G+ + G V  VG GV+  + GD    VF        H                 
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDR---VFCF----GPH----------------- 54

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 143
                                       +E  VV +  +  +    P +          T
Sbjct: 55  ----------------------------AERVVVPANLLVPLPDGLPPE------RAALT 80

Query: 144 GLGAT-LN---VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 199
            L AT LN    A+P  G  VAV GLG VGL AA+ A+ AGA  ++GVD  + R E A+ 
Sbjct: 81  ALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEA 140

Query: 200 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 259
            G  D V          +   E+   G D  +E +G+   + +A   + D  G  VLVG 
Sbjct: 141 LGPADPVA--------ADTADEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGW 191

Query: 260 PSKDAVFMTKPINVLNERTLKGT---FFGNYKPRTDLPSVVDMYMNKQL----ELEKFIT 312
                + + +  +      ++ +     G Y          ++     L     LE  IT
Sbjct: 192 YGLKPLLLGEEFH-FKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALIT 250

Query: 313 HRIPFSEINKAFE 325
           HR+PF +  +A+ 
Sbjct: 251 HRVPFEDAPEAYR 263

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 92.1 bits (229), Expect = 5e-21
 Identities = 88/320 (27%), Positives = 133/320 (41%), Gaps = 54/320 (16%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI--NPV 83
           P + GHE AG++E VG  V  L VGD V       C  C  C+    N+C  ++    P 
Sbjct: 74  PMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATP- 132

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI------- 136
                        ++G   N            VVH   +    P    + V +       
Sbjct: 133 ------------PVHGSLANQ-----------VVHPADLCFKLP----ENVSLEEGAMCE 165

Query: 137 -LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 195
            LS GV     A +    PE  ++V V G G +GL     AR  GA RI+ VD   +R  
Sbjct: 166 PLSVGVHACRRANIG---PE--TNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLS 220

Query: 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWG 252
            AK+ G  + V  S +   ++  + E+     GG+D S +C G    M +A E    G G
Sbjct: 221 VAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-G 279

Query: 253 VAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 312
              LVG+   +   MT P+     R +     G ++ R   P  ++   + +++++  IT
Sbjct: 280 KVCLVGMGHNE---MTVPLTPAAAREVD--VVGVFRYRNTWPLCLEFLRSGKIDVKPLIT 334

Query: 313 HRIPFS--EINKAFEYMVKG 330
           HR  FS  E+ +AFE   +G
Sbjct: 335 HRFGFSQKEVEEAFETSARG 354

Length = 364

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 89.9 bits (224), Expect = 2e-20
 Identities = 59/199 (29%), Positives = 80/199 (40%), Gaps = 38/199 (19%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           P  P I GHE  G VE+VG GV+   VGD V +P     CG+CR+CRS   N+CD     
Sbjct: 56  PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCD----- 110

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP------LAPLDKVC 135
                            G  V+       ++EY V        I         AP     
Sbjct: 111 ------------NARFTGYTVD-----GGYAEYMVADERFAYPIPEDYDDEEAAP----- 148

Query: 136 ILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 195
            L C    G  A L +A  + G  + ++G GA    A + AR  GA  +    RS +  E
Sbjct: 149 -LLCAGIIGYRA-LKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQE 205

Query: 196 EAKKFGVTDFVNTSEHDRP 214
            A++ G  D+   S+   P
Sbjct: 206 LARELG-ADWAGDSDDLPP 223

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 87.0 bits (216), Expect = 2e-19
 Identities = 80/334 (23%), Positives = 122/334 (36%), Gaps = 61/334 (18%)

Query: 5   KHNSFNPR--NFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECG 62
           K    NP       G        P I G EAAGVV +VG GV+  +VGD V         
Sbjct: 35  KAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVA-------- 86

Query: 63  DCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV 122
                                 G +  DG                   ++EY VV +  +
Sbjct: 87  --------------------ALGGVGRDG------------------GYAEYVVVPADWL 108

Query: 123 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGA 181
             +      ++   L     T   A  + A  + G +V V G  G VG AA + A+  GA
Sbjct: 109 VPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA 168

Query: 182 SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNM 240
           + +  V  S K  E  K+ G    +N  E D    E + E+T G GVD  ++  G  D  
Sbjct: 169 TVVAVVSSSEKL-ELLKELGADHVINYREED--FVEQVRELTGGKGVDVVLDTVG-GDTF 224

Query: 241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER-TLKGTFFGNYKPRTDLP---SV 296
            ++   +  G G  V +G  S         + +L +R TL+G   G+  P         +
Sbjct: 225 AASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAEL 283

Query: 297 VDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 330
            D+  + +L+    I    P +E   A  +++  
Sbjct: 284 FDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLE 315

Length = 326

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 83.1 bits (206), Expect = 5e-18
 Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 27/190 (14%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           +PR+ GHE  G +++VGEGVS  +VGD V +    G CG C  CR      C+  ++   
Sbjct: 54  YPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT-- 111

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVS 142
            GV    G                   ++EY +  +  +A+I   L   +   +L  GV+
Sbjct: 112 -GVTRDGG-------------------YAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT 151

Query: 143 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202
           T      + AKP  G  VAV G+G +G  A + A   G  R + + R S + + A+K G 
Sbjct: 152 TFNALRNSGAKP--GDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGA 208

Query: 203 TDFVNTSEHD 212
             +++TS+ D
Sbjct: 209 HHYIDTSKED 218

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 82.6 bits (205), Expect = 9e-18
 Identities = 71/331 (21%), Positives = 113/331 (34%), Gaps = 69/331 (20%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79
           G  P +P I G + AG V  VG GV+  +VGD V        G                 
Sbjct: 49  GFIPSYPAILGCDFAGTVVEVGSGVTRFKVGDRV-------AGFVHGGNP---------- 91

Query: 80  INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC 139
                                   +      F EY V  +   AKI      ++   L  
Sbjct: 92  ------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPV 127

Query: 140 GVST---GLGATLNVAKP-------ERGSSVAVFGLG--AVGLAAAEGARIAGASRIIGV 187
           G+ T    L   L +  P        +G  V ++G G  +VG  A + A++AG  ++I  
Sbjct: 128 GLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWG-GSSSVGTLAIQLAKLAGY-KVITT 185

Query: 188 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV 247
             S K F+  K  G     +   HD  + E I   T G +  +++C    ++     E +
Sbjct: 186 -ASPKNFDLVKSLGADAVFDY--HDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEAL 242

Query: 248 HDGWG--VAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 305
               G  +  L+ VP +          V  +  L  T FG      +   V   Y+ + L
Sbjct: 243 GRSGGGKLVSLLPVPEETE----PRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELL 298

Query: 306 ELEKFITHRIP-----FSEINKAFEYMVKGE 331
           E  K   H +         + +  + + KG+
Sbjct: 299 EEGKLKPHPVRVVEGGLEGVQEGLDLLRKGK 329

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 76/320 (23%), Positives = 127/320 (39%), Gaps = 40/320 (12%)

Query: 17  GFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
           G  G     P I G + AGVVE+VG GV++++ G  V+      CG C +C +   N+C 
Sbjct: 49  GMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCA 108

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI 136
                            ++ I GE   H  G   ++EY  V +  +  I      ++   
Sbjct: 109 -----------------QYGILGE---HVDG--GYAEYVAVPARNLLPIPDNLSFEEAAA 146

Query: 137 LSCGVSTGLGATLNVAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFE 195
                 T     +  A+   G +V V G G+ VG AA + A++ GA  +I    S  + E
Sbjct: 147 APLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLE 205

Query: 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV 255
            AK+ G  D+V     +  ++EV       GVD  VE  G       + + +  G G  V
Sbjct: 206 RAKELG-ADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLV 262

Query: 256 LVGVPSKDAVFMTKPINV----LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 311
             G  +        PI++      + ++ G+  G    + +L     + +  + +L+  I
Sbjct: 263 TCGATTGYEA----PIDLRHVFWRQLSILGSTMGT---KAELDEA--LRLVFRGKLKPVI 313

Query: 312 THRIPFSEINKAFEYMVKGE 331
               P  E  +A   +   E
Sbjct: 314 DSVFPLEEAAEAHRRLESRE 333

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 80.1 bits (198), Expect = 7e-17
 Identities = 82/328 (25%), Positives = 128/328 (39%), Gaps = 60/328 (18%)

Query: 21  QTPLFPRIFGHEAAGVVESVGEGVSD--LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           + P+ P   GHE  G V  +GEG  +  ++VGD V+      C +CR C      MC   
Sbjct: 61  KPPMIP---GHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKH 117

Query: 79  RI----NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 134
            +    N V G M            E +        F +  +VH     K+    P +  
Sbjct: 118 DLYGFQNNVNGGM-----------AEYM-------RFPKEAIVH-----KVPDDIPPEDA 154

Query: 135 CI---LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191
            +   L+C +       ++ A  +    V + G G +GL     AR+    ++I +D   
Sbjct: 155 ILIEPLACALHA-----VDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKD 209

Query: 192 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID------NMISAF 244
           +R   A+KFG    +N  E D  + E I E+T G G D  +E TG+        NMI   
Sbjct: 210 ERLALARKFGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL 267

Query: 245 ECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 304
                  G  V   V           I    E  + G+  G Y      P  +D+  + +
Sbjct: 268 -------GRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYC----YPIAIDLIASGR 316

Query: 305 LELEKFITHRIPFSEINKAFEYMVKGEG 332
           L  +  +TH+ P  +  +AFE M +G+ 
Sbjct: 317 LPTDGIVTHQFPLEDFEEAFELMARGDD 344

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 74.6 bits (184), Expect = 8e-17
 Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 22/101 (21%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P I GHE AG+VE VG GV+ L+VGD V+      CG C  CR    N+C   +     
Sbjct: 30  LPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYPLIPCGKCAACREGRENLCPNGK---FL 86

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 125
           GV L DG                   F+EY VV +  +  +
Sbjct: 87  GVHL-DG------------------GFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 81/319 (25%), Positives = 128/319 (40%), Gaps = 52/319 (16%)

Query: 18  FQGQTPL--FPRIFGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSN 73
           ++G  P   +PR+ GHE  GV+++VGEGV    +G+ V   PV +  CG C  C     N
Sbjct: 44  YRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVIS--CGHCYPCSIGKPN 101

Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           +C  L    V GV   DG                   FSEY VV +    +I P A  D+
Sbjct: 102 VCTSLV---VLGVH-RDG------------------GFSEYAVVPAKNAHRI-PDAIADQ 138

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEG-ARIAGASRIIGVDRSSK 192
             ++    +     T     P       ++G G VGL   +    +     +I  DR  +
Sbjct: 139 YAVMVEPFTIAANVTGRT-GPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDE 197

Query: 193 RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG 252
           R   AK+ G    +N ++   P+ E + E       + ++ T  ID       C      
Sbjct: 198 RLALAKESGADWVINNAQE--PLGEALEE-------KGIKPTLIIDAA-----CHPSILE 243

Query: 253 VAVLVGVPSKDAVFM---TKPINVLNERTLKGTFFGNYKPRTD---LPSVVDMYMNKQLE 306
            AV +  P+   V M   ++P  ++ ++ + G     +  R +    P V+D      ++
Sbjct: 244 EAVTLASPAARIVLMGFSSEPSEIV-QQGITGKELSIFSSRLNANKFPVVIDWLSKGLID 302

Query: 307 LEKFITHRIPFSEINKAFE 325
            EK ITH   F  +  A E
Sbjct: 303 PEKLITHTFDFQHVADAIE 321

Length = 339

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 76.6 bits (189), Expect = 9e-16
 Identities = 60/216 (27%), Positives = 87/216 (40%), Gaps = 40/216 (18%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           +P I GHE  G VE VGE V   + GD V  +     G C +CRS     C         
Sbjct: 54  YPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC--------- 104

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
                  ++R    GE ++ F     F+EY  V    + K+ P    +   I+ C     
Sbjct: 105 -------KNRLGY-GEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMV 151

Query: 145 LGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 203
               L  A  ++G +V V G  G VG+ A + A+  GA ++I V  S  + +   K+   
Sbjct: 152 YRG-LRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKYA-- 207

Query: 204 DFVNT----SEHDRPIQEVIAEMTNGGVDRSVECTG 235
           D+V      SE  + I         GG D  +E  G
Sbjct: 208 DYVIVGSKFSEEVKKI---------GGADIVIETVG 234

Length = 334

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 62/318 (19%), Positives = 108/318 (33%), Gaps = 70/318 (22%)

Query: 17  GFQGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC 75
             +   PL  P I GH+ AGVV +VG GV+  +VGD V                      
Sbjct: 50  LLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVF--------------------- 88

Query: 76  DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP--LAPLDK 133
                          G + F+  G           ++EY VV +  +A   P  L+  + 
Sbjct: 89  ---------------GMTPFTRGG----------AYAEYVVVPADELALK-PANLSFEEA 122

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSK 192
             +   G+ T   A   +   + G +V + G  G VG  A + A+  GA R+I    ++ 
Sbjct: 123 AALPLAGL-TAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAAN 180

Query: 193 RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG 252
             +  +  G  + ++        +   A    GGVD  ++  G  + +  +   V  G  
Sbjct: 181 A-DFLRSLGADEVIDY--TKGDFERAAAP---GGVDAVLDTVGG-ETLARSLALVKPG-- 231

Query: 253 VAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 312
              LV +                 R ++  F         L  + ++    +L     + 
Sbjct: 232 -GRLVSIAG-----PPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRP--VVD 283

Query: 313 HRIPFSEINKAFEYMVKG 330
              P  +  +A E +  G
Sbjct: 284 RVFPLEDAAEAHERLESG 301

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.1 bits (183), Expect = 6e-15
 Identities = 81/314 (25%), Positives = 125/314 (39%), Gaps = 58/314 (18%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P I   + AG V +VGEGV+  +VGD V+P F                       N + 
Sbjct: 57  DPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTF---------------------FPNWLD 95

Query: 85  GVMLADGQSR---FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
           G   A+ ++      I+G            +EY V+    + +       ++   L C  
Sbjct: 96  GPPTAEDEASALGGPIDG----------VLAEYVVLPEEGLVRAPDHLSFEEAATLPCAG 145

Query: 142 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
            T   A   +   + G +V V G G V L A + A+ AGA R+I    S ++ E AK  G
Sbjct: 146 LTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALG 204

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
               +N        +EV+ ++T G GVD  VE  G    +  + + V  G GV  L+G  
Sbjct: 205 ADHVINYRTTPDWGEEVL-KLTGGRGVDHVVE-VGGPGTLAQSIKAVAPG-GVISLIGFL 261

Query: 261 SKDAVFMTKPINVL----NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF---ITH 313
           S        P+ +L       TL+G   G+   R    +     MN+ +E  +    I  
Sbjct: 262 SGFEA----PVLLLPLLTKGATLRGIAVGS---RAQFEA-----MNRAIEAHRIRPVIDR 309

Query: 314 RIPFSEINKAFEYM 327
             PF E  +A+ Y+
Sbjct: 310 VFPFEEAKEAYRYL 323

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 72.9 bits (179), Expect = 2e-14
 Identities = 76/313 (24%), Positives = 120/313 (38%), Gaps = 54/313 (17%)

Query: 18  FQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 77
           F+     +P   GHE +G VE+VG GV DL  GD V  V    C  C  C     ++C  
Sbjct: 46  FKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAK 105

Query: 78  LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTF---SEYTVVHSGCVAKINPLAPLDKV 134
                                      F+G+      +EY VV    +  +    P++  
Sbjct: 106 Y-------------------------DFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDG 140

Query: 135 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 194
             +   ++ GL A  ++A+   G +V + G G +GL A + A   GA  +  +D +S++ 
Sbjct: 141 AFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKL 198

Query: 195 EEAKKFGVTDFVNTSEHDRP-IQEVIAE-------MTNGGVDRSVECTGNIDNMISAFEC 246
             AK  G     N+ E   P IQ V+ E       +   GV ++VE    I    +    
Sbjct: 199 ALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQL-- 256

Query: 247 VHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYK---PRTDLPSVVDMYM 301
                    LVG    D    +     +   E T+ G++  NY    P  +  +   +  
Sbjct: 257 --------ALVGTLHHDLHLTSATFGKILRKELTVIGSWM-NYSSPWPGQEWETASRLLT 307

Query: 302 NKQLELEKFITHR 314
            ++L LE  I HR
Sbjct: 308 ERKLSLEPLIAHR 320

Length = 347

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.1 bits (175), Expect = 7e-14
 Identities = 56/214 (26%), Positives = 82/214 (38%), Gaps = 55/214 (25%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79
            + P  P   G+EAAGVVE+VG GV+   VGD V  +                       
Sbjct: 52  IEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPA--------------------- 90

Query: 80  INPVRGVMLADGQSRFSINGEPVNHFLGTS-TFSEYTVVHSGCVAKINPLAPLDKVCILS 138
                                     LG   T++EY +V +  V K+     L  V   +
Sbjct: 91  ------------------------ADLGQYGTYAEYALVPAAAVVKLPDG--LSFVEAAA 124

Query: 139 CGVS--TGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE 195
             +   T  GA + +A    G SV +     +VGLAA + A  AGA  +I   R+S++ +
Sbjct: 125 LWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRD 183

Query: 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 228
                G    + T E D  +   +  +T G GVD
Sbjct: 184 ALLALGAAHVIVTDEED--LVAEVLRITGGKGVD 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 69.9 bits (171), Expect = 3e-13
 Identities = 66/218 (30%), Positives = 100/218 (45%), Gaps = 28/218 (12%)

Query: 28  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 87
           + GHE  G V   G  V  +++GD V   F   CG CR+C+   + +C  L +NP R   
Sbjct: 64  VLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVC--LNVNPAR--- 118

Query: 88  LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK---------VCILS 138
            A     +   G     ++G    SEY +V     A  N L   D+         + +LS
Sbjct: 119 -AGAAYGYVDMGG----WVGGQ--SEYVMVP---YADFNLLKFPDRDQALEKIRDLTMLS 168

Query: 139 CGVSTGL-GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197
               TG  GA      P  GS+V + G G VGLAAA  A++ GA+ +I  D +  R  +A
Sbjct: 169 DIFPTGYHGAVTAGVGP--GSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA 226

Query: 198 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235
           + FG  + V+ S+     +++   +    VD +V+C G
Sbjct: 227 RSFGC-ETVDLSKDATLPEQIEQILGEPEVDCAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 68.9 bits (169), Expect = 5e-13
 Identities = 79/309 (25%), Positives = 131/309 (42%), Gaps = 42/309 (13%)

Query: 27  RIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
           RI GHE  G+V+ VG GV+ L+VGD V +  F   CG C +C +    +C        R 
Sbjct: 55  RILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLC--------RS 106

Query: 86  VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTG 144
           V  A     ++++G            +E  +V +    K+   L P     I   GV+T 
Sbjct: 107 VKNAG----YTVDG----------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTT- 151

Query: 145 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 204
               + V+  + G  +A++G G +G  A + A+    +++I VD +  +   AK+ G   
Sbjct: 152 -YKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADL 210

Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
            +N+   +  + ++I E   GG   +V           A + V  G G  V VG+P  ++
Sbjct: 211 TINSKRVE-DVAKIIQE-KTGGAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP-ES 266

Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE---KFITHRIPFSEIN 321
           + ++ P  VL+   + G+  G    R DL          Q   E          P  +IN
Sbjct: 267 MDLSIPRLVLDGIEVVGSLVGT---RQDLEEAF------QFGAEGKVVPKVQLRPLEDIN 317

Query: 322 KAFEYMVKG 330
             F+ M +G
Sbjct: 318 DIFDEMEQG 326

Length = 338

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 83/319 (26%), Positives = 129/319 (40%), Gaps = 56/319 (17%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           +P + GHE  G V  VG  VS   VGD V + V  G CG+C  C+SD+   C+  RI   
Sbjct: 63  YPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCN-KRIWSY 121

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVS 142
             V           +G+P         F+   VV    V KI   +AP     +L  GV 
Sbjct: 122 NDVY---------TDGKPTQ-----GGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV- 166

Query: 143 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG 201
           T      +    + G    + GLG VG    + A+  G   +  +  S K+ EEA +  G
Sbjct: 167 TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSDKKREEALEHLG 225

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH-----------DG 250
             D++ +S+         AEM         E   ++D +I      H           D 
Sbjct: 226 ADDYLVSSD--------AAEMQ--------EAADSLDYIIDTVPVFHPLEPYLSLLKLD- 268

Query: 251 WGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 310
            G  +L+GV +    F+T P+ +L  + + G+F G+ K   +   +++    K L     
Sbjct: 269 -GKLILMGVINTPLQFVT-PMLMLGRKVITGSFIGSMK---ETEEMLEFCKEKGL---TS 320

Query: 311 ITHRIPFSEINKAFEYMVK 329
           +   +    +N AFE + K
Sbjct: 321 MIEVVKMDYVNTAFERLEK 339

Length = 357

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 63/312 (20%), Positives = 104/312 (33%), Gaps = 64/312 (20%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           FP I G + AG V +VG GV+  +VGD V     G                         
Sbjct: 58  FPPIPGMDFAGEVVAVGSGVTRFKVGDEVF----GRLPPKGG------------------ 95

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVST 143
                                 G    +EY V     +AK    ++  +   +   G+ T
Sbjct: 96  ----------------------GA--LAEYVVAPESGLAKKPEGVSFEEAAALPVAGL-T 130

Query: 144 GLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202
            L A  +  K + G  V + G  G VG  A + A+  GA  + GV  S++  E  +  G 
Sbjct: 131 ALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVC-STRNAELVRSLGA 188

Query: 203 TDFVNTSEHDRPIQEVIAEMTNGGV-DRSVECTGNIDNMISAFECVHDGW--GVAVLVGV 259
            + ++ +  D      +A    G   D   +  GN     S +         G  V VG 
Sbjct: 189 DEVIDYTTED-----FVALTAGGEKYDVIFDAVGNSP--FSLYRASLALKPGGRYVSVGG 241

Query: 260 PSKDAVFMTKPINVLNERTLKGTFFGNYKP-RTDLPSVVDMYMNKQLELEKFITHRIPFS 318
                + +   + +      +   F   KP   DL  + ++    +L+    I    P  
Sbjct: 242 GPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKP--VIDSVYPLE 299

Query: 319 EINKAFEYMVKG 330
           +  +A+  +  G
Sbjct: 300 DAPEAYRRLKSG 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 64.2 bits (156), Expect = 2e-11
 Identities = 75/312 (24%), Positives = 128/312 (41%), Gaps = 45/312 (14%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
           P   GHE +G V   G G +   +G  V+      CG+C  C++    +C   R   + G
Sbjct: 54  PLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTIC---RAQKMPG 109

Query: 86  VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA----PLDKVCILSC 139
             +  G                   F+ + VV +   CV     LA    PL+ V +++ 
Sbjct: 110 NDMQGG-------------------FASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVAD 150

Query: 140 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 199
            V+T   A +  A  ++G  V V G G VG    + A+  GA+ ++ +D   ++ E  K 
Sbjct: 151 AVTTPYQAAVQ-AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKG 208

Query: 200 FGVTDFVNTSEHD-RPIQEVIAEMTNGGVDRS-----VECTGNIDNMISAFECVHDGWGV 253
           FG    +N  +   R ++++I         RS      EC+G+     SA   +  G G 
Sbjct: 209 FGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GT 267

Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDL-PSVVDMYMNKQLELEKFIT 312
            V+VG       +    +   + R L     GN+    D  P+ +D+ ++ +++L  F+ 
Sbjct: 268 LVVVGYTMAKTEYRLSNLMAFHARAL-----GNWGCPPDRYPAALDLVLDGKIQLGPFVE 322

Query: 313 HRIPFSEINKAF 324
            R P  +I   F
Sbjct: 323 RR-PLDQIEHVF 333

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 61.9 bits (151), Expect = 9e-11
 Identities = 87/332 (26%), Positives = 120/332 (36%), Gaps = 71/332 (21%)

Query: 28  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC---DLLRINPVR 84
           + GHEA GVVE VG+G S L  GD V+P      G C +CR    + C   +       R
Sbjct: 60  VLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT----ER 114

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           G+    G  R     +P           EY V       K+ P   L  V +L       
Sbjct: 115 GIKGLHGFMREYFVDDP-----------EYLV-------KVPP--SLADVGVL------- 147

Query: 145 LGATLNVAK-------------PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191
           L     V K                     V G G +GL AA   R+ G   +  ++R  
Sbjct: 148 LEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRD 206

Query: 192 KRFEEAK---KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
               +A    + G T +VN+S+   P+ EV      G  D  +E TG       A   + 
Sbjct: 207 PPDPKADIVEELGAT-YVNSSKT--PVAEVKLV---GEFDLIIEATGVPPLAFEALPALA 260

Query: 249 DGWGVAVLVGVPSKDAVFM--TKPIN---VLNERTLKGTFFGNYKPRTDLPSVVDMY--M 301
              GV +L GVP     F      +N   VL  + L G+   N   +      V+     
Sbjct: 261 PN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQW 316

Query: 302 NKQLE--LEKFITHRIPFSEINKAFEYMVKGE 331
             +    LE+ IT R+P  E  +A      GE
Sbjct: 317 KYRWPGVLERLITRRVPLEEFAEALTEKPDGE 348

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 62/308 (20%), Positives = 103/308 (33%), Gaps = 56/308 (18%)

Query: 28  IFGHEAAGVVESVGEGVS-DLEVGDHV--LPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           + GHE  G V   G G    L+VG  V  LP+    CG    C   +S            
Sbjct: 66  VLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLL--CGQGASCGIGLSPE---------- 113

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
                      +  G           ++EY ++    + ++     ++   +    ++ G
Sbjct: 114 -----------APGG-----------YAEYMLLSEALLLRVPDGLSMEDAALTE-PLAVG 150

Query: 145 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 204
           L A +  A+   G    V G G +GLA     +  G   I+  D S +R   A   G   
Sbjct: 151 LHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADI 209

Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSV--ECTGNIDNMISAFECVHDGWGVAVLVGV-PS 261
            V+ +               GG   +V  EC G    +    E    G G  V+VGV   
Sbjct: 210 VVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCME 268

Query: 262 KDAVF----MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317
            D +     + K + +         F   Y P  +    +D     ++++   +T  +  
Sbjct: 269 SDNIEPALAIRKELTL--------QFSLGYTPE-EFADALDALAEGKVDVAPMVTGTVGL 319

Query: 318 SEINKAFE 325
             +  AFE
Sbjct: 320 DGVPDAFE 327

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 60.6 bits (148), Expect = 2e-10
 Identities = 55/212 (25%), Positives = 82/212 (38%), Gaps = 55/212 (25%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           Q + PL P + G E AGVVE+VGEGV+  +VGD V                         
Sbjct: 52  QVKPPL-PFVPGSEVAGVVEAVGEGVTGFKVGDRV-------VA---------------- 87

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
                                       G   F+E  VV +  V  +      ++   L 
Sbjct: 88  --------------------------LTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALP 121

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197
               T   A +  A+ + G +V V G  G VGLAA + A+  GA R+I    S ++   A
Sbjct: 122 VTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALA 180

Query: 198 KKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 228
           +  G    ++  + D  ++E +  +T G GVD
Sbjct: 181 RALGADHVIDYRDPD--LRERVKALTGGRGVD 210

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 77/339 (22%), Positives = 111/339 (32%), Gaps = 86/339 (25%)

Query: 19  QGQTPLFPRIFGH-EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 77
                         + AGVVE+VGEGV  L+VGD    V+    G  R            
Sbjct: 50  AYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGD---RVWLTNLGWGRR----------- 95

Query: 78  LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 137
                                           T +EY VV            P D++  L
Sbjct: 96  ------------------------------QGTAAEYVVV------------PADQLVPL 113

Query: 138 SCGVSTGLGATLNV------------AKPERGSSVAVFG-LGAVGLAAAEGARIAGASRI 184
             GVS   GA L +            A  + G +V V G  GAVG AA + AR AGA R+
Sbjct: 114 PDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RV 172

Query: 185 IGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISA 243
           I    S++  E  ++ G     N    D  + + I   T G GVD  +E   N  N+   
Sbjct: 173 IATASSAEGAELVRQAGADAVFNYRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKD 229

Query: 244 FECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTD-----LPSVVD 298
            + +  G  + V      +  +    PIN L  +         Y    +       ++  
Sbjct: 230 LDVLAPGGRIVVYGSGGLRGTI----PINPLMAKEASIRGVLLYTATPEERAAAAEAIAA 285

Query: 299 MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 337
              +  L     I    P  E   A E +  G  +  ++
Sbjct: 286 GLADGALRPV--IAREYPLEEAAAAHEAVESGGAIGKVV 322

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 78/314 (24%), Positives = 114/314 (36%), Gaps = 69/314 (21%)

Query: 25  FPRIFGHEAAGVVESVGEG--VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
           FP + GHE  G+VE   E   V    VG+  +      CG C +CR  +   C      P
Sbjct: 50  FPGVPGHEFVGIVEEGPEAELVGKRVVGEINIA-----CGRCEYCRRGLYTHC------P 98

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
            R V+   G      +G           F+EY               PL+ + ++   V 
Sbjct: 99  NRTVL---GIVDR--DG----------AFAEYLT------------LPLENLHVVPDLVP 131

Query: 143 TG-------LGATLNV---AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK 192
                    L A L +        G  VAV G G +GL  A+   + G   ++ V R S+
Sbjct: 132 DEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSE 190

Query: 193 RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG 252
           +   A++ GV            +    AE   GG D  VE TG+   +  A   V    G
Sbjct: 191 KLALARRLGVE----------TVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRPR-G 239

Query: 253 VAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT 312
             VL    +  A F      V+NE TL G+  G           + +     ++++  IT
Sbjct: 240 TVVLKSTYAGPASFDLTKA-VVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLIT 292

Query: 313 HRIPFSEINKAFEY 326
              P  E  +AFE 
Sbjct: 293 AVYPLEEALEAFER 306

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 56.1 bits (136), Expect = 6e-09
 Identities = 57/250 (22%), Positives = 90/250 (36%), Gaps = 55/250 (22%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           +P + G + AGVV +VG  V+  +VGD V                               
Sbjct: 56  YPHVPGVDGAGVVVAVGAKVTGWKVGDRVA----------------------------YH 87

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
             +   G                  +F+EYTVV +  V  +      ++   L C   T 
Sbjct: 88  ASLARGG------------------SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTA 129

Query: 145 LGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 203
             A     + E G ++ + G  G VG  A + A+ AG  R+I    S + FE  K  G  
Sbjct: 130 YQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGAD 187

Query: 204 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP-- 260
             ++   +D  + E I E+T G GVD  ++  G  +   +    +     +  + G P  
Sbjct: 188 HVID--YNDEDVCERIKEITGGRGVDAVLDTVGG-ETAAALAPTLAFNGHLVCIQGRPDA 244

Query: 261 SKDAVFMTKP 270
           S D  F    
Sbjct: 245 SPDPPFTRAL 254

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 54.1 bits (130), Expect = 3e-08
 Identities = 47/190 (24%), Positives = 72/190 (37%), Gaps = 22/190 (11%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           +P + GHE  G+V  +G+ V   + GD V + V  G C  C  C  D+ N C        
Sbjct: 66  YPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCP------- 118

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYT---VVHSGCVAKINPLAPLDKVCILSCG 140
                   +  F+ N    +   GT  +  Y+   VV    V +     PLD    L C 
Sbjct: 119 --------KMIFTYNSIGHD---GTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCA 167

Query: 141 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 200
             T           E G  + V GLG +G  A +  +  G    +    S+K  E   + 
Sbjct: 168 GITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL 227

Query: 201 GVTDFVNTSE 210
           G   F+ +++
Sbjct: 228 GADSFLVSTD 237

Length = 360

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 53.5 bits (128), Expect = 5e-08
 Identities = 73/311 (23%), Positives = 122/311 (39%), Gaps = 35/311 (11%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           +P I GHE  G+   VG+ V+  + GD V + V  G C  C  C  D+ N C        
Sbjct: 60  YPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCP------- 112

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVS 142
                   +  F+ N    +       +S+  VV    V  I    P D    L C G++
Sbjct: 113 --------KVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT 164

Query: 143 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG 201
                       E G  + V GLG +G  A +  +  G  R+  + RSS++  EA  + G
Sbjct: 165 VYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLG 223

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
              F+ T++  +  + V      G +D  ++       ++  F  +    G  V +G+P 
Sbjct: 224 ADSFLVTTDSQKMKEAV------GTMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE 276

Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMY-MNKQLELEKFITHRIPFSEI 320
           K       P+ VL  + + G+  G  K   ++      + +   +EL       I  S+I
Sbjct: 277 KPLDLPIFPL-VLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIEL-------IKMSDI 328

Query: 321 NKAFEYMVKGE 331
           N A + + K +
Sbjct: 329 NSAMDRLAKSD 339

Length = 375

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 52.4 bits (127), Expect = 1e-07
 Identities = 73/333 (21%), Positives = 116/333 (34%), Gaps = 109/333 (32%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P + G E AGVVE+VG GV+  +VGD V   + G                         
Sbjct: 54  LPFVLGVEGAGVVEAVGPGVTGFKVGDRV--AYAG------------------------- 86

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
                                     ++EY VV +  + K+              G+S  
Sbjct: 87  ----------------------PPGAYAEYRVVPASRLVKLPD------------GISDE 112

Query: 145 LGATL------------NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 191
             A L                 + G +V V    G VGL   + A+  GA  +IG   S 
Sbjct: 113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSE 171

Query: 192 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDG 250
           ++ E A+  G    +N  + D    E + E+T G GVD   +  G  D    + + +   
Sbjct: 172 EKAELARAAGADHVINYRDED--FVERVREITGGRGVDVVYDGVG-KDTFEGSLDSLRPR 228

Query: 251 WGVAVLVG-----VP-------SKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPS--- 295
            G  V  G     VP       SK ++F+T+P           + F     R +L +   
Sbjct: 229 -GTLVSFGNASGPVPPFDLLRLSKGSLFLTRP-----------SLFHYIATREELLARAA 276

Query: 296 -VVDMYMNKQLELEKFITHRIPFSEINKAFEYM 327
            + D   + +L++E  I  R P ++  +A   +
Sbjct: 277 ELFDAVASGKLKVE--IGKRYPLADAAQAHRDL 307

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 66/263 (25%), Positives = 106/263 (40%), Gaps = 37/263 (14%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
           P + GHE  G +       S L+ G  V    +  CG C++C S   N C  +R      
Sbjct: 60  PMVLGHEVIGKIVHSDS--SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF---- 113

Query: 86  VMLADGQSRFS--INGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVS 142
                G + +   ++G           F+ Y VV +  C+    P    +KV   +  ++
Sbjct: 114 -----GSAMYFPHVDG----------GFTRYKVVDTAQCIPY--PEKADEKVMAFAEPLA 156

Query: 143 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202
             + A  + A   +G  V V G+G +G       +  GA+ I+  D S +    A++ G 
Sbjct: 157 VAIHA-AHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGA 215

Query: 203 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 262
              VN    +  +    AE   G  D S E +G+  ++ +  E V    GV V VG+   
Sbjct: 216 DKLVNPQ--NDDLDHYKAE--KGYFDVSFEVSGHPSSINTCLE-VTRAKGVMVQVGMGGA 270

Query: 263 DAVFMTKPINVL--NERTLKGTF 283
              F   P+  L   E +LKG+F
Sbjct: 271 PPEF---PMMTLIVKEISLKGSF 290

Length = 343

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 49/170 (28%), Positives = 68/170 (40%), Gaps = 31/170 (18%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVL---PVFTGECGDCRHCRSDVSNMCDLLRINP 82
           P I G E AGVVE VG+ V  ++ GD V+    VF    G C  C S    +C     N 
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVF---DGTCDMCLSGNEMLCR----NG 107

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
               ++++G                   ++EY VV    + KI      +    L     
Sbjct: 108 GIIGVVSNG------------------GYAEYIVVPEKNLFKIPDSISDELAASLPVAAL 149

Query: 143 TGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 191
           T   A L  A    G +V VFG  G  G+ A + A++ GA  +I V R  
Sbjct: 150 TAYHA-LKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSRKD 197

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 49.9 bits (120), Expect = 7e-07
 Identities = 52/220 (23%), Positives = 75/220 (34%), Gaps = 55/220 (25%)

Query: 13  NF--VFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSD 70
           NF  V    G  P      G E +G+V  VG GV+ L+VGD V+                
Sbjct: 13  NFRDVLVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM---------------- 56

Query: 71  VSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 130
                                              L    F+ +  V +  V KI     
Sbjct: 57  ----------------------------------GLAPGAFATHVRVDARLVVKIPDSLS 82

Query: 131 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDR 189
            ++   L     T   A +++A+ ++G SV +    G VG AA + A+  GA     V  
Sbjct: 83  FEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGS 142

Query: 190 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 228
             KR    +  G  D + +S  D    + I   T G GVD
Sbjct: 143 EEKREFLRELGGPVDHIFSS-RDLSFADGILRATGGRGVD 181

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 22 TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP 55
          TP  P + G+E  G V  VG GV  L+ GD V+P
Sbjct: 60 TPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIP 93

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 47.2 bits (113), Expect = 6e-06
 Identities = 19/38 (50%), Positives = 23/38 (60%)

Query: 17 GFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL 54
          G     P  P + G E AG VE+VGEGV D +VGD V+
Sbjct: 48 GLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVM 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.4 bits (111), Expect = 9e-06
 Identities = 19/38 (50%), Positives = 22/38 (57%)

Query: 16 FGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 53
           G     P  P I G + AGVVE+VGEGV+   VGD V
Sbjct: 48 RGGAAARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 51/220 (23%), Positives = 78/220 (35%), Gaps = 40/220 (18%)

Query: 139 CGVSTGLGA--TLN-VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF 194
           C V   + A   L+  AK   G  V + G  G VG A  E A +AGA  + G   S +  
Sbjct: 119 CLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTA-SERNH 176

Query: 195 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVA 254
              ++ G T     ++   P     A +T GGVD   +  G  ++   ++  +  G G  
Sbjct: 177 AALRELGATPIDYRTKDWLP-----AMLTPGGVDVVFDGVG-GESYEESYAALAPG-GTL 229

Query: 255 VLVGVPSKDAVFMTKPINVLNER----TLKGTFFGN---------------YKPRTDLPS 295
           V  G  S           + +       LK    G                   R DL  
Sbjct: 230 VCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTE 289

Query: 296 VVDMYMNKQLELEKF---ITHRIPFSEINKAFEYMVKGEG 332
           ++D+     L   K    I  R+P SE+ +A   +  G+ 
Sbjct: 290 LLDL-----LAKGKIRPKIAKRLPLSEVAEAHRLLESGKV 324

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 45.1 bits (108), Expect = 2e-05
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 26 PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 59
            + G E AGVV  VG GV+ L VGD V+ +  G
Sbjct: 23 EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPG 56

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 56/221 (25%), Positives = 79/221 (35%), Gaps = 37/221 (16%)

Query: 16  FGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC 75
            G+ G T  FPRI G +  G V +VGEGV    +G+ VL V        R    D     
Sbjct: 68  AGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVL-VDPSI----RDPPEDDPADI 122

Query: 76  DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC 135
           D +            G  R   +G           F+EYTVV +     +N      ++ 
Sbjct: 123 DYI------------GSER---DG----------GFAEYTVVPAENAYPVNSPLSDVELA 157

Query: 136 ILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF 194
              C  ST     L  A    G +V V G  G VG A  + A+  GA  +I V  ++K  
Sbjct: 158 TFPCSYSTAEN-MLERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAAKE- 214

Query: 195 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 235
           E  +  G    +          + +       VD   +  G
Sbjct: 215 EAVRALGADTVILRDAPLLADAKALGG---EPVDVVADVVG 252

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 53/247 (21%), Positives = 86/247 (34%), Gaps = 64/247 (25%)

Query: 8   SFNPRNFVF--GFQGQTPLFPRIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDC 64
           + NP +      +     +  +  G + +GV+  VG  V S+ +VGD V       CG  
Sbjct: 39  ALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEV-------CGIY 91

Query: 65  RHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNH----------FLGTSTFSEY 114
            H       +   L ++P         + + SI  +P N            LGT+    Y
Sbjct: 92  PHPYGGQGTLSQYLLVDP--------KKDKKSITRKPENISLEEAAAWPLVLGTA----Y 139

Query: 115 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAE 174
            ++          L P  KV +L        G +         +SV   G  A+ LA   
Sbjct: 140 QILED----LGQKLGPDSKVLVL--------GGS---------TSV---GRFAIQLAKNH 175

Query: 175 GARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVI-AEMTNGGVDRSV 231
                    ++G   SS+  E  KK G   F++   H     ++ V+      G  D  +
Sbjct: 176 YN----IGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLIL 230

Query: 232 ECTGNID 238
           +C G  D
Sbjct: 231 DCVGGYD 237

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 19/40 (47%), Positives = 22/40 (55%)

Query: 20 GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 59
          G  P  P + G+E  GVV  VG GVS L VG  VLP+   
Sbjct: 51 GSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGE 90

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 44/210 (20%), Positives = 69/210 (32%), Gaps = 53/210 (25%)

Query: 28  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 87
           I G E AG VE VG  V   + GD V+ +  G                            
Sbjct: 61  ILGLEVAGYVEDVGSDVKRFKEGDRVMALLPG---------------------------- 92

Query: 88  LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 147
                                  ++EY V H G V  I      ++   +     T    
Sbjct: 93  ---------------------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQL 131

Query: 148 TLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 206
                  ++G SV +  G   VG AAA+ A   GA+ II    S ++ +  KK      +
Sbjct: 132 LKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILI 190

Query: 207 NTSEHDRPIQEVIAEMTNG-GVDRSVECTG 235
              + +      + ++T   GV+  ++C G
Sbjct: 191 RYPD-EEGFAPKVKKLTGEKGVNLVLDCVG 219

Length = 334

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query: 26 PRIFGHEAAGVVESVGEGVSDLEVGDHV 53
          P+I G +A+GVVE+VG  V+  +VGD V
Sbjct: 60 PKILGWDASGVVEAVGSEVTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 67/326 (20%), Positives = 116/326 (35%), Gaps = 82/326 (25%)

Query: 19  QGQTPL--FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
           QG +P   FPR+ G EA G VE    G      G  V                  + M  
Sbjct: 48  QGHSPSVKFPRVLGIEAVGEVEEAPGG--TFTPGQRV-----------------ATAMGG 88

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI 136
           + R                + +G          +++EYT+V +  V  I+      ++  
Sbjct: 89  MGR----------------TFDG----------SYAEYTLVPNEQVYAIDSDLSWAELAA 122

Query: 137 LSCGVSTGLGA---TLNVAKPE----RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 189
           L     T  G+   +L +   +    RG + +V GL A+ LA A GA +   +      R
Sbjct: 123 LPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSV-GLAALKLAKALGATVTATT------R 175

Query: 190 SSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN--IDNMISAFEC 246
           S +R    K+ G  +  ++       ++        GG D+ +E  G   + +   +   
Sbjct: 176 SPERAALLKELGADEVVIDDGAIAEQLRAA-----PGGFDKVLELVGTATLKD---SLRH 227

Query: 247 VHDGWGVAVLVGVPSKDAVFMT-KPINVL---NERTLKGTFFGNYKPRTDLPSVVDMYMN 302
           +  G G+  + G+           P++ +      TL G       P+T L  + D    
Sbjct: 228 LRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTG-SSSGDVPQTPLQELFDFVAA 285

Query: 303 KQLELEKFITHRI-PFSEINKAFEYM 327
             L++      ++  F EI +A  YM
Sbjct: 286 GHLDI---PPSKVFTFDEIVEAHAYM 308

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 20/39 (51%), Positives = 24/39 (61%)

Query: 15 VFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 53
          + G  G  P  P I G EA GVV++VGEGV  L+VG  V
Sbjct: 48 IRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRV 86

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 41/196 (20%)

Query: 28  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 87
           I G +A+G+V +VGEGV + +VGD V+           HC     N  +    +P    M
Sbjct: 84  IGGSDASGIVWAVGEGVKNWKVGDEVVV----------HCSVWDGNDPERAGGDP----M 129

Query: 88  LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLG 146
               Q    I G   N+     +F+++ +V +   + K   L+  +            +G
Sbjct: 130 FDPSQ---RIWGYETNY----GSFAQFALVQATQLMPKPKHLSWEEAAAY------MLVG 176

Query: 147 ATL---------NVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 196
           AT          N  KP  G +V ++G  G +G  A + AR AGA   + V  S ++ E 
Sbjct: 177 ATAYRMLFGWNPNTVKP--GDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEY 233

Query: 197 AKKFGVTDFVNTSEHD 212
            +  G    +N  + D
Sbjct: 234 CRALGAEGVINRRDFD 249

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 23 PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE 60
          P +P   G EA+GVV +VG  V+ L VGD V+   TGE
Sbjct: 35 PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVI-AGTGE 71

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 43/169 (25%), Positives = 62/169 (36%), Gaps = 47/169 (27%)

Query: 30  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 88
           GHE  G V   G       VGD V +      CG CR+CR    N+C             
Sbjct: 61  GHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLC------------- 107

Query: 89  ADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKI------NPLAPLDKVCILSC 139
                       P + + G  T   ++EYT V +    ++        LAPL     L  
Sbjct: 108 ------------PASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPL-----LCA 150

Query: 140 GVSTGLGATLNVAKPERGSSVAVFGLGAVG-----LAAAEGARIAGASR 183
           G+  G  A L  + P  G  + ++G G        +A A+GA +   +R
Sbjct: 151 GI-IGYRALLRASLPP-GGRLGLYGFGGSAHLTAQVALAQGATVHVMTR 197

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 17/32 (53%), Positives = 19/32 (59%)

Query: 22 TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 53
           P  P   G EAAGVV  VG GV  ++VGD V
Sbjct: 54 PPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRV 85

Length = 327

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 22  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 53
              FP   G + +GVV  +G GV   E+GD V
Sbjct: 70  GIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEV 101

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 30 GHEAAGVVESVGEGVSDLEVGDHV 53
          G E  G V +VGEGV+D +VGD V
Sbjct: 65 GFEGVGEVVAVGEGVTDFKVGDAV 88

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	341
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.98
PTZ00354	334	alcohol dehydrogenase; Provisional	99.98
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.97
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	99.97
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.97
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	99.97
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.97
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	99.97
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.97
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	99.96
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.96
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.96
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.96
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.96
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.96
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.95
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.93
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.85
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.74
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.45
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.36
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.13
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.68
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.46
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.41
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.25
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.19
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.19
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.11
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	98.06
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.01
PLN02494	477	adenosylhomocysteinase	98.0
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.97
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.95
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.8
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.69
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.66
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.61
PRK08324	681	short chain dehydrogenase; Validated	97.58
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.58
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.56
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.44
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.38
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.34
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.31
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.21
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.1
TIGR00438	188	rrmJ cell division protein FtsJ.	97.09
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.04
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.01
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.01
PRK05993	277	short chain dehydrogenase; Provisional	96.9
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.9
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.88
PRK06182	273	short chain dehydrogenase; Validated	96.85
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.84
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.83
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.83
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.82
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.76
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.75
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.74
PRK05693	274	short chain dehydrogenase; Provisional	96.72
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.69
COG4122	219	Predicted O-methyltransferase [General function pr	96.66
PRK12742	237	oxidoreductase; Provisional	96.65
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.62
PRK08017	256	oxidoreductase; Provisional	96.58
PRK04148	134	hypothetical protein; Provisional	96.56
PRK06139	330	short chain dehydrogenase; Provisional	96.55
PRK00536	262	speE spermidine synthase; Provisional	96.55
PRK08177	225	short chain dehydrogenase; Provisional	96.54
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.53
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.5
PRK07060	245	short chain dehydrogenase; Provisional	96.5
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.47
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.42
PRK07326	237	short chain dehydrogenase; Provisional	96.41
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.37
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.36
PLN02366	308	spermidine synthase	96.35
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.34
PLN03209	576	translocon at the inner envelope of chloroplast su	96.34
PRK06057	255	short chain dehydrogenase; Provisional	96.34
PRK06953	222	short chain dehydrogenase; Provisional	96.26
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.25
PRK07402	196	precorrin-6B methylase; Provisional	96.24
PRK00811	283	spermidine synthase; Provisional	96.24
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.17
PRK06949	258	short chain dehydrogenase; Provisional	96.16
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.15
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.15
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	96.13
PRK05872	296	short chain dehydrogenase; Provisional	96.11
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.1
PRK14967	223	putative methyltransferase; Provisional	96.1
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.09
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.07
PRK12828	239	short chain dehydrogenase; Provisional	96.05
PRK07814	263	short chain dehydrogenase; Provisional	96.05
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.04
PRK07806	248	short chain dehydrogenase; Provisional	96.01
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.98
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.98
PLN02780	320	ketoreductase/ oxidoreductase	95.98
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.97
PRK04457	262	spermidine synthase; Provisional	95.95
PRK06180	277	short chain dehydrogenase; Provisional	95.95
PRK06841	255	short chain dehydrogenase; Provisional	95.95
PRK07831	262	short chain dehydrogenase; Provisional	95.94
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.93
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.92
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.91
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.91
COG2910	211	Putative NADH-flavin reductase [General function p	95.9
PRK07825	273	short chain dehydrogenase; Provisional	95.88
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.87
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.86
PRK09291	257	short chain dehydrogenase; Provisional	95.83
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	95.82
PRK12829	264	short chain dehydrogenase; Provisional	95.81
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.8
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.78
PRK11207	197	tellurite resistance protein TehB; Provisional	95.77
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.76
PRK01581	374	speE spermidine synthase; Validated	95.75
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.73
PRK05867	253	short chain dehydrogenase; Provisional	95.72
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.71
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.67
PRK09072	263	short chain dehydrogenase; Provisional	95.66
PRK05866	293	short chain dehydrogenase; Provisional	95.65
PRK08703	239	short chain dehydrogenase; Provisional	95.64
PRK07774	250	short chain dehydrogenase; Provisional	95.64
PLN02476	278	O-methyltransferase	95.63
PRK08628	258	short chain dehydrogenase; Provisional	95.59
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.59
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.58
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.58
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.58
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.58
PRK08339	263	short chain dehydrogenase; Provisional	95.57
PRK05884	223	short chain dehydrogenase; Provisional	95.57
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.57
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.56
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.52
PRK06198	260	short chain dehydrogenase; Provisional	95.51
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.5
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.5
CHL00194	317	ycf39 Ycf39; Provisional	95.48
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.46
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.45
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.44
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.43
PRK07478	254	short chain dehydrogenase; Provisional	95.41
PRK06196	315	oxidoreductase; Provisional	95.4
PRK06483	236	dihydromonapterin reductase; Provisional	95.38
PRK06500	249	short chain dehydrogenase; Provisional	95.37
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.37
PRK07024	257	short chain dehydrogenase; Provisional	95.35
PRK08317	241	hypothetical protein; Provisional	95.35
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.35
PRK08265	261	short chain dehydrogenase; Provisional	95.33
PRK06482	276	short chain dehydrogenase; Provisional	95.31
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.31
PRK07454	241	short chain dehydrogenase; Provisional	95.3
PRK07062	265	short chain dehydrogenase; Provisional	95.28
PRK08267	260	short chain dehydrogenase; Provisional	95.28
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.27
PRK08618	325	ornithine cyclodeaminase; Validated	95.27
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.27
PRK06179	270	short chain dehydrogenase; Provisional	95.25
PRK07677	252	short chain dehydrogenase; Provisional	95.25
PRK12939	250	short chain dehydrogenase; Provisional	95.25
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.25
PLN02823	336	spermine synthase	95.25
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.24
PRK08862	227	short chain dehydrogenase; Provisional	95.24
PRK07890	258	short chain dehydrogenase; Provisional	95.24
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.23
PRK07904	253	short chain dehydrogenase; Provisional	95.2
PRK06172	253	short chain dehydrogenase; Provisional	95.17
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.17
PRK08589	272	short chain dehydrogenase; Validated	95.16
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.16
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.16
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.15
PRK08264	238	short chain dehydrogenase; Validated	95.14
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	95.14
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.13
PRK07109	334	short chain dehydrogenase; Provisional	95.13
KOG1252	362	consensus Cystathionine beta-synthase and related	95.13
PRK06181	263	short chain dehydrogenase; Provisional	95.12
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.11
PRK05854	313	short chain dehydrogenase; Provisional	95.1
PRK06194	287	hypothetical protein; Provisional	95.09
PRK07832	272	short chain dehydrogenase; Provisional	95.08
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.07
PRK10538	248	malonic semialdehyde reductase; Provisional	95.06
PRK06138	252	short chain dehydrogenase; Provisional	95.04
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.04
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.02
PRK08226	263	short chain dehydrogenase; Provisional	95.01
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.01
KOG0725	270	consensus Reductases with broad range of substrate	95.0
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.0
PRK07067	257	sorbitol dehydrogenase; Provisional	94.99
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.99
PRK07856	252	short chain dehydrogenase; Provisional	94.95
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	94.94
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	94.94
PRK07576	264	short chain dehydrogenase; Provisional	94.93
PRK08643	256	acetoin reductase; Validated	94.92
PRK07574	385	formate dehydrogenase; Provisional	94.9
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.9
PRK07063	260	short chain dehydrogenase; Provisional	94.89
PRK06125	259	short chain dehydrogenase; Provisional	94.89
PLN02253	280	xanthoxin dehydrogenase	94.89
PRK07074	257	short chain dehydrogenase; Provisional	94.87
PRK12548	289	shikimate 5-dehydrogenase; Provisional	94.86
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	94.86
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	94.86
PRK05875	276	short chain dehydrogenase; Provisional	94.85
PRK06128	300	oxidoreductase; Provisional	94.85
PRK12367	245	short chain dehydrogenase; Provisional	94.84
PRK07035	252	short chain dehydrogenase; Provisional	94.83
PRK09186	256	flagellin modification protein A; Provisional	94.82
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.82
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.82
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.8
PRK05717	255	oxidoreductase; Validated	94.8
PRK06914	280	short chain dehydrogenase; Provisional	94.8
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	94.79
PRK08219	227	short chain dehydrogenase; Provisional	94.78
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.78
PRK06101	240	short chain dehydrogenase; Provisional	94.77
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.77
PLN03075	296	nicotianamine synthase; Provisional	94.76
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	94.76
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.74
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.74
PRK08251	248	short chain dehydrogenase; Provisional	94.71
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.7
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	94.68
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.68
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.67
PRK06114	254	short chain dehydrogenase; Provisional	94.67
PRK05876	275	short chain dehydrogenase; Provisional	94.67
PRK06197	306	short chain dehydrogenase; Provisional	94.65
PRK07577	234	short chain dehydrogenase; Provisional	94.65
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.65
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	94.64
PRK06124	256	gluconate 5-dehydrogenase; Provisional	94.62
PRK09242	257	tropinone reductase; Provisional	94.62
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.62
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.61
PRK08328	231	hypothetical protein; Provisional	94.6
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.6
PRK07102	243	short chain dehydrogenase; Provisional	94.59
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.58
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.57
PRK06398	258	aldose dehydrogenase; Validated	94.56
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.54
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.53
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.53
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.52
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.52
PRK10258	251	biotin biosynthesis protein BioC; Provisional	94.51
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.51
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	94.49
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.47
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.47
PRK08263	275	short chain dehydrogenase; Provisional	94.47
PRK07340	304	ornithine cyclodeaminase; Validated	94.46
PRK10669	558	putative cation:proton antiport protein; Provision	94.46
PRK08085	254	gluconate 5-dehydrogenase; Provisional	94.43
PLN02244	340	tocopherol O-methyltransferase	94.42
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	94.4
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.4
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	94.39
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.38
PLN03139	386	formate dehydrogenase; Provisional	94.37
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	94.37
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.34
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.34
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.33
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.31
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.3
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	94.29
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.28
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.25
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.22
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	94.2
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.18
PLN02233	261	ubiquinone biosynthesis methyltransferase	94.17
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	94.14
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	94.13
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	94.13
PRK06484	520	short chain dehydrogenase; Validated	94.12
PRK07985	294	oxidoreductase; Provisional	94.11
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.1
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	94.1
PRK06720	169	hypothetical protein; Provisional	94.09
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.08
PRK04266	226	fibrillarin; Provisional	94.07
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	94.04
PLN00203	519	glutamyl-tRNA reductase	93.99
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	93.98
PRK07417	279	arogenate dehydrogenase; Reviewed	93.98
PRK13243	333	glyoxylate reductase; Reviewed	93.97
PLN02256	304	arogenate dehydrogenase	93.97
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	93.96
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	93.95
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	93.93
COG0673	342	MviM Predicted dehydrogenases and related proteins	93.92
PRK07097	265	gluconate 5-dehydrogenase; Provisional	93.87
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.86
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	93.85
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	93.85
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.85
COG0569	225	TrkA K+ transport systems, NAD-binding component [	93.85
PRK06523	260	short chain dehydrogenase; Provisional	93.84
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	93.84
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.84
PRK11933	470	yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF;	93.83
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	93.82
PRK12938	246	acetyacetyl-CoA reductase; Provisional	93.82
PLN02490	340	MPBQ/MSBQ methyltransferase	93.82
PRK08278	273	short chain dehydrogenase; Provisional	93.79
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	93.78
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	93.77
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	93.76
PRK05650	270	short chain dehydrogenase; Provisional	93.75
PRK06484	520	short chain dehydrogenase; Validated	93.75
PLN03013	429	cysteine synthase	93.74
PRK14903	431	16S rRNA methyltransferase B; Provisional	93.73
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	93.73
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.71
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	93.69
PRK13255	218	thiopurine S-methyltransferase; Reviewed	93.69
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	93.68
PRK11579	346	putative oxidoreductase; Provisional	93.67
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	93.61
PRK12743	256	oxidoreductase; Provisional	93.58
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.56
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	93.55
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	93.55
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	93.53
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	93.53
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	93.52
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.52
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	93.51
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	93.49
PRK13984	604	putative oxidoreductase; Provisional	93.48
PF01564	246	Spermine_synth: Spermine/spermidine synthase; Inte	93.48
COG4106	257	Tam Trans-aconitate methyltransferase [General fun	93.46
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	93.42
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.42
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	93.41
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.4
PRK03659	601	glutathione-regulated potassium-efflux system prot	93.35
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	93.31
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	93.3
PRK13403	335	ketol-acid reductoisomerase; Provisional	93.28
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	93.27
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	93.25
PRK09135	249	pteridine reductase; Provisional	93.24
COG0144	355	Sun tRNA and rRNA cytosine-C5-methylases [Translat	93.21
PRK12480	330	D-lactate dehydrogenase; Provisional	93.19
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	93.16
PRK07791	286	short chain dehydrogenase; Provisional	93.16
PRK12937	245	short chain dehydrogenase; Provisional	93.14
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	93.12
PRK14902	444	16S rRNA methyltransferase B; Provisional	93.11
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	93.1
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.1
PRK06940	275	short chain dehydrogenase; Provisional	93.08
PLN02928	347	oxidoreductase family protein	93.07
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	93.03
PRK05855	582	short chain dehydrogenase; Validated	93.03
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.02
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	93.01
PRK03612	521	spermidine synthase; Provisional	93.0
PRK08303	305	short chain dehydrogenase; Provisional	93.0
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	92.96
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	92.94
TIGR02415	254	23BDH acetoin reductases. One member of this famil	92.94
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	92.92
PRK07775	274	short chain dehydrogenase; Provisional	92.92
PRK14982	340	acyl-ACP reductase; Provisional	92.91
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.91

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=4.5e-59  Score=404.21  Aligned_cols=336  Identities=46%  Similarity=0.826  Sum_probs=314.3

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||+.|+|+||.|.....+..+..+|+++|||++|+|++||++|+++++||+|+..+.-+||.|.+|+++.+|+|.....
T Consensus        31 lVri~AtGVCHTD~~~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~  110 (366)
T COG1062          31 LVRITATGVCHTDAHTLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRA  110 (366)
T ss_pred             EEEEEEeeccccchhhhcCCCCCCCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhh
Confidence            68999999999998877777777799999999999999999999999999999999999999999999999999999888


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ....|. ..+|.+.++.++...+++.+.++|+||.++++..++++++..+++.++.+.|...|++.+.++.+++++|+++
T Consensus       111 ~~~kG~-m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tv  189 (366)
T COG1062         111 TQGKGT-MPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTV  189 (366)
T ss_pred             hccccc-ccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeE
Confidence            877774 4567788889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      .|.|.|++|++++|-|+..|+.++|+++.+++|++++++||+++++|..+.. +..+.+.+++++++|++|||+|+.+.+
T Consensus       190 aV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~  268 (366)
T COG1062         190 AVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVD-DVVEAIVELTDGGADYAFECVGNVEVM  268 (366)
T ss_pred             EEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhh-hHHHHHHHhcCCCCCEEEEccCCHHHH
Confidence            9999999999999999999999999999999999999999999999998763 389999999999999999999999999


Q ss_pred             HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414          241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI  320 (341)
Q Consensus       241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i  320 (341)
                      ++++.++.+ ||+.+++|.......+++.+..+..+.++.|++++...++.++.++++++.+|++.+.+++++.++|+||
T Consensus       269 ~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~I  347 (366)
T COG1062         269 RQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDI  347 (366)
T ss_pred             HHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHH
Confidence            999999999 5999999988777667666666666799999999998888999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCcceEEEec
Q 019414          321 NKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       321 ~ea~~~~~~~~~~k~vl~~  339 (341)
                      ||||+.|.+++.+|.|+.+
T Consensus       348 Neaf~~m~~G~~IR~Vi~~  366 (366)
T COG1062         348 NEAFDLMHEGKSIRSVIRF  366 (366)
T ss_pred             HHHHHHHhCCceeeEEecC
Confidence            9999999999999998864

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=7.4e-58  Score=405.29  Aligned_cols=303  Identities=31%  Similarity=0.508  Sum_probs=265.1

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEe-cccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP-VFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~-~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|++|+......+. ..+|+|||||.+|+|+++|++|++|++||||.+ ++..+|++|+||++|++|+|++.
T Consensus        32 lI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~  111 (339)
T COG1064          32 LIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQ  111 (339)
T ss_pred             EEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCc
Confidence            6899999999999665444333 358999999999999999999999999999998 89999999999999999999997


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      +++            +|+          .+|+||||+++|+.+++++|+++++++||.+.|+..|.|++| +.++++||+
T Consensus       112 ~~~------------gy~----------~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~  168 (339)
T COG1064         112 KIT------------GYT----------TDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGK  168 (339)
T ss_pred             ccc------------cee----------ecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCC
Confidence            763            333          446999999999999999999999999999999999999996 559999999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|+|+|.|++|++++|+|+.+|+ +|++++++++|++.++++|++++++.++.+  ..+.+++.    +|+++|+++ +.
T Consensus       169 ~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~~~--~~~~~~~~----~d~ii~tv~-~~  240 (339)
T COG1064         169 WVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSDSD--ALEAVKEI----ADAIIDTVG-PA  240 (339)
T ss_pred             EEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCCch--hhHHhHhh----CcEEEECCC-hh
Confidence            99999999999999999999998 999999999999999999999999877443  66666554    999999999 89


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCC-CCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      .++++++.|+++ |+++++|... ...........+.+++++.|+..++.   .++++++++..++++.+.  +.+.+++
T Consensus       241 ~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~---~d~~e~l~f~~~g~Ikp~--i~e~~~l  314 (339)
T COG1064         241 TLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR---ADLEEALDFAAEGKIKPE--ILETIPL  314 (339)
T ss_pred             hHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH---HHHHHHHHHHHhCCceee--EEeeECH
Confidence            999999999998 9999999874 32221112334678999999998876   789999999999988776  3279999


Q ss_pred             CcHHHHHHHHhcCCc-ceEEEecC
Q 019414          318 SEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      +|+++|++.|.+++. +|+|+++.
T Consensus       315 ~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         315 DEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             HHHHHHHHHHHcCCeeeEEEecCC
Confidence            999999999999996 59999875

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-56  Score=381.91  Aligned_cols=338  Identities=52%  Similarity=0.925  Sum_probs=318.9

Q ss_pred             ccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            2 LSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         2 ~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      ||..+.++|+.|........ ...||.|+|||++|+|+.+|++|+++++||+|+..+...|+.|.+|+++..|.|...+.
T Consensus        37 IKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~  116 (375)
T KOG0022|consen   37 IKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRA  116 (375)
T ss_pred             EEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcc
Confidence            67889999999977665553 34589999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      +...+.+..+|.+.|.-.|..++|+.+..+|+||.+++...+.++++..+++.++.|.|.+.|+|.|..+.++++||+++
T Consensus       117 ~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~Gstv  196 (375)
T KOG0022|consen  117 DNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTV  196 (375)
T ss_pred             cccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEE
Confidence            98888888899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      .|+|-|++|++++|-||..|++++|+++-+++|.+.++++|++..+|+.+......+.++++|++|+|+.|||+|+.+++
T Consensus       197 AVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m  276 (375)
T KOG0022|consen  197 AVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTM  276 (375)
T ss_pred             EEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHH
Confidence            99999999999999999999999999999999999999999999999986555688999999999999999999999999


Q ss_pred             HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414          241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI  320 (341)
Q Consensus       241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i  320 (341)
                      .+++.+..++||+-+.+|.......+.+.+..+.++.++.|+.++.++.+.+++.+.+.+.++++.++.++++.+||+++
T Consensus       277 ~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~I  356 (375)
T KOG0022|consen  277 RAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEI  356 (375)
T ss_pred             HHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHH
Confidence            99999999999999999998877778887777889999999999999888999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCcceEEEec
Q 019414          321 NKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       321 ~ea~~~~~~~~~~k~vl~~  339 (341)
                      ++||+.|.+++.+|.|+.+
T Consensus       357 n~AF~ll~~GksiR~vl~~  375 (375)
T KOG0022|consen  357 NKAFDLLHEGKSIRCVLWM  375 (375)
T ss_pred             HHHHHHHhCCceEEEEEeC
Confidence            9999999999999998864

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.7e-55  Score=375.41  Aligned_cols=313  Identities=27%  Similarity=0.449  Sum_probs=271.8

Q ss_pred             CccccccCCcCcceeeeccCCCC----CCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTP----LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~----~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +|++++.|+|-+|..+...+...    +.||++|||.+|+|.++|+.|+++++||||++.|..+|+.|++|++|+||+|.
T Consensus        33 lv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp  112 (354)
T KOG0024|consen   33 LVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCP  112 (354)
T ss_pred             EEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCC
Confidence            57899999999996654443332    46999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ...+...+-                     -+|++++|++.+++.+++||+++|++++| |..+++++|||. +++.+++
T Consensus       113 ~m~f~atpp---------------------~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~HAc-r~~~vk~  169 (354)
T KOG0024|consen  113 HMVFCATPP---------------------VDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVHAC-RRAGVKK  169 (354)
T ss_pred             ccccccCCC---------------------cCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhhhh-hhcCccc
Confidence            998853221                     13799999999999999999999999965 667899999995 7899999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC--hhHHHHHHHHhcC-CccEEEec
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--RPIQEVIAEMTNG-GVDRSVEC  233 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~~i~~~~~~-~~d~vld~  233 (341)
                      |+++||+|+|++|+.+...||.+|+++|+.++-.+.|+++++++|++.+.+....+  ..+.+.+.+..++ .+|+.|||
T Consensus       170 Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dC  249 (354)
T KOG0024|consen  170 GSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDC  249 (354)
T ss_pred             CCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEc
Confidence            99999999999999999999999999999999999999999999998776554433  2344555555554 69999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceee
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH  313 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  313 (341)
                      +|....++.++..++.+ |++++.++.....+++.... ..+++++.|++.+..   .+++.+++++++|++.+++++|+
T Consensus       250 sG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v-~~kE~~~~g~fry~~---~~y~~ai~li~sGki~~k~lIT~  324 (354)
T KOG0024|consen  250 SGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDV-ALKEVDLRGSFRYCN---GDYPTAIELVSSGKIDVKPLITH  324 (354)
T ss_pred             cCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhh-hhheeeeeeeeeecc---ccHHHHHHHHHcCCcCchhheec
Confidence            99988999999999998 99999998877766766444 568999999875543   58999999999999999999999


Q ss_pred             eecCCcHHHHHHHHhcCC--cceEEEecCC
Q 019414          314 RIPFSEINKAFEYMVKGE--GLRCIISMED  341 (341)
Q Consensus       314 ~~~~~~i~ea~~~~~~~~--~~k~vl~~~~  341 (341)
                      +|++++..+||+.+..++  .+|++++.++
T Consensus       325 r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~  354 (354)
T KOG0024|consen  325 RYKFDDADEAFETLQHGEEGVIKVIITGPE  354 (354)
T ss_pred             ccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence            999999999999998887  4699998764

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.2e-51  Score=351.38  Aligned_cols=311  Identities=26%  Similarity=0.412  Sum_probs=266.6

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEE-EecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V-~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||++++|+|++|+......+. ..+|+|+|||.+|+|+++|++|++|++|||| +.+.+.+|.+|+||+.+++++|+..
T Consensus        40 ~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~  119 (360)
T KOG0023|consen   40 LVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKM  119 (360)
T ss_pred             EEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCce
Confidence            5889999999999765444333 5799999999999999999999999999999 5577889999999999999999975


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .++.          .++.+||     ..++|+||+|+++++..++++|++++.+.||.+.|+..|.|.+| ...++.||+
T Consensus       120 ~~t~----------~g~~~DG-----t~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~  183 (360)
T KOG0023|consen  120 HFTY----------NGVYHDG-----TITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGK  183 (360)
T ss_pred             eEec----------cccccCC-----CCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCc
Confidence            5532          3555666     33458999999999999999999999999999999999999995 567888999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHHcCCceecCCC-CCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTS-EHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vv~~~-~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      ++.|.|+|++|++++|+||++|. +|+++++++ +|.+.++.||++..++.. +++  +.+++.+.+++++|-+.+.  +
T Consensus       184 ~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d--~~~~~~~~~dg~~~~v~~~--a  258 (360)
T KOG0023|consen  184 WVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTEDPD--IMKAIMKTTDGGIDTVSNL--A  258 (360)
T ss_pred             EEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecCCHH--HHHHHHHhhcCcceeeeec--c
Confidence            99999997799999999999999 999998887 777788889999988876 444  8888888887777777766  4


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      ...++.++.+++++ |++|++|.......++.. .+..+.+.+.|+.+++.   .+.++++++..++.+...   .+..+
T Consensus       259 ~~~~~~~~~~lk~~-Gt~V~vg~p~~~~~~~~~-~lil~~~~I~GS~vG~~---ket~E~Ldf~a~~~ik~~---IE~v~  330 (360)
T KOG0023|consen  259 EHALEPLLGLLKVN-GTLVLVGLPEKPLKLDTF-PLILGRKSIKGSIVGSR---KETQEALDFVARGLIKSP---IELVK  330 (360)
T ss_pred             ccchHHHHHHhhcC-CEEEEEeCcCCcccccch-hhhcccEEEEeeccccH---HHHHHHHHHHHcCCCcCc---eEEEe
Confidence            57899999999998 999999998775444443 33668889999998876   689999999999988766   69999


Q ss_pred             CCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          317 FSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      ++++++|++.|++++. .|.|++++
T Consensus       331 ~~~v~~a~erm~kgdV~yRfVvD~s  355 (360)
T KOG0023|consen  331 LSEVNEAYERMEKGDVRYRFVVDVS  355 (360)
T ss_pred             hhHHHHHHHHHHhcCeeEEEEEEcc
Confidence            9999999999999996 59998875

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=5.1e-50  Score=373.05  Aligned_cols=333  Identities=38%  Similarity=0.676  Sum_probs=272.9

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++++|+.|...........+|.++|||++|+|+++|++++++++||||++.+..+|+.|++|+++++|+|.+...
T Consensus        37 lV~v~~~gi~~~D~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~  116 (371)
T cd08281          37 LVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAA  116 (371)
T ss_pred             EEEEEEEeeCccchHhhcCCCCCCCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccc
Confidence            68999999999996654333334579999999999999999999999999999998888999999999999999988654


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ....|.... +...+..++..+.+..+.|+|+||+.++++.++++|+++++++|+.+++++.|||+++.+..++++|++|
T Consensus       117 ~~~~g~~~~-g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~V  195 (371)
T cd08281         117 ANGAGTLLS-GGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSV  195 (371)
T ss_pred             ccccccccc-CcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEE
Confidence            332222111 1111222222222222347999999999999999999999999999999999999998888899999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      ||+|+|++|++++|+||..|++.|++++++++|+++++++|++.++++.+.+  +.+.+++.+++++|++|||+|.+..+
T Consensus       196 lV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~  273 (371)
T cd08281         196 AVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPAL  273 (371)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHH
Confidence            9999999999999999999997799999999999999999999999887655  77888888777899999999988899


Q ss_pred             HHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414          241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE  319 (341)
Q Consensus       241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  319 (341)
                      +.++++++++ |+++.+|.........+.. ..+.+++++.|+....+..++++++++++++++++.+.+++++.|+|+|
T Consensus       274 ~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~  352 (371)
T cd08281         274 ETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDE  352 (371)
T ss_pred             HHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHH
Confidence            9999999998 9999999754322222222 2356889999987655433457899999999999998888999999999


Q ss_pred             HHHHHHHHhcCCcceEEE
Q 019414          320 INKAFEYMVKGEGLRCII  337 (341)
Q Consensus       320 i~ea~~~~~~~~~~k~vl  337 (341)
                      +++|++.+.+++..|.|+
T Consensus       353 ~~~A~~~~~~~~~~~~vi  370 (371)
T cd08281         353 INEGFDRLAAGEAVRQVI  370 (371)
T ss_pred             HHHHHHHHhCCCceeeee
Confidence            999999999998875554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=6e-50  Score=371.95  Aligned_cols=338  Identities=47%  Similarity=0.888  Sum_probs=269.7

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|+....... ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+.+++|+|.+..
T Consensus        30 lI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~  109 (368)
T TIGR02818        30 LVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVR  109 (368)
T ss_pred             EEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcc
Confidence            589999999999965433222 2357899999999999999999999999999999999999999999999999998743


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      .....|+. .++..++..+|..+++..+.|+|+||+++|.+.++++|++++++++|.+++++.|||+++.+..++++|++
T Consensus       110 ~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~  188 (368)
T TIGR02818       110 ETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDT  188 (368)
T ss_pred             cccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCE
Confidence            22111111 11111222334333333345899999999999999999999999999999999999999888889999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |||+|+|++|++++|+||.+|+.+|++++++++|++.++++|++.++++.+.+..+.+.+++.+++++|++|||+|++..
T Consensus       189 VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~  268 (368)
T TIGR02818       189 VAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNV  268 (368)
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHH
Confidence            99999999999999999999997799999999999999999999999877543346677878777789999999998788


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE  319 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  319 (341)
                      +.++++++++++|+++.+|.......+......+.++..+.++.........++++++++++++++.+.++++++|+|+|
T Consensus       269 ~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~  348 (368)
T TIGR02818       269 MRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLED  348 (368)
T ss_pred             HHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHH
Confidence            99999999873499999997542222222222222344466665443222356899999999999988888999999999


Q ss_pred             HHHHHHHHhcCCcceEEEec
Q 019414          320 INKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       320 i~ea~~~~~~~~~~k~vl~~  339 (341)
                      +++|++.+.+++..|++|.+
T Consensus       349 ~~~A~~~~~~~~~~k~~v~~  368 (368)
T TIGR02818       349 INEAFDLMHEGKSIRTVIHY  368 (368)
T ss_pred             HHHHHHHHhCCCceeEEeeC
Confidence            99999999888878999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=1.2e-49  Score=370.34  Aligned_cols=338  Identities=73%  Similarity=1.214  Sum_probs=276.8

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||+.++|+|+.|........ ...+|+++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++|+|....
T Consensus        31 lIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~  110 (369)
T cd08301          31 RIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLR  110 (369)
T ss_pred             EEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcc
Confidence            589999999999965433222 3467999999999999999999999999999999999999999999999999999865


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      .+...++...++...+...|...++....|+|+||+.+++..++++|+++++++++.+++++.|||+++.+..++++|++
T Consensus       111 ~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~  190 (369)
T cd08301         111 INTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGST  190 (369)
T ss_pred             cccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCE
Confidence            54333332222222222223222223345899999999999999999999999999999999999999888889999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.++++.+.+..+.+.+++.+++++|++||++|.+..
T Consensus       191 VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~  270 (369)
T cd08301         191 VAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDA  270 (369)
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHH
Confidence            99999999999999999999987799999999999999999999898876543347777888777789999999998788


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE  319 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  319 (341)
                      +..+++++++++|+++.+|.......+++....+.+++++.|+....+..+.+++++++++.++++.+.++++++|+|+|
T Consensus       271 ~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~  350 (369)
T cd08301         271 MISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSE  350 (369)
T ss_pred             HHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHH
Confidence            89999999993389999997654333333333344688999887665544457899999999999988888899999999


Q ss_pred             HHHHHHHHhcCCcceEEEe
Q 019414          320 INKAFEYMVKGEGLRCIIS  338 (341)
Q Consensus       320 i~ea~~~~~~~~~~k~vl~  338 (341)
                      +++|++.+.+++..|++|+
T Consensus       351 ~~~A~~~~~~~~~~k~~~~  369 (369)
T cd08301         351 INKAFDLLLKGECLRCILH  369 (369)
T ss_pred             HHHHHHHHHCCCceeEEeC
Confidence            9999999999998899874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.6e-49  Score=370.73  Aligned_cols=339  Identities=49%  Similarity=0.938  Sum_probs=272.7

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+.......  ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++.+|.|++.
T Consensus        39 lV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~  118 (381)
T PLN02740         39 RIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETY  118 (381)
T ss_pred             EEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCc
Confidence            589999999999965433222  235799999999999999999999999999999999999999999999999999986


Q ss_pred             cccCcccccccCCCcccccC--CCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           79 RINPVRGVMLADGQSRFSIN--GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ...+........+...+...  +..+.+....|+|+||++++.+.++++|++++++++|.+++++.|||+++.+..++++
T Consensus       119 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~  198 (381)
T PLN02740        119 RVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQA  198 (381)
T ss_pred             cccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCC
Confidence            54321110000011111110  1111122235899999999999999999999999999999999999998878889999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      |++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+.+.++.+.+++.+++++|++||++|.
T Consensus       199 g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~  278 (381)
T PLN02740        199 GSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGN  278 (381)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCC
Confidence            99999999999999999999999986799999999999999999999998877543347777888776689999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      +..+..++.++++++|+++.+|.......+++....+.+++++.|+..+.+....+++++++++.++++.+.++++++|+
T Consensus       279 ~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~  358 (381)
T PLN02740        279 VEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELP  358 (381)
T ss_pred             hHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEec
Confidence            88999999999883399999997654322333333234688898887655443356889999999999988888899999


Q ss_pred             CCcHHHHHHHHhcCCcceEEEec
Q 019414          317 FSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      |+|+++|++.+.+++..|++|+.
T Consensus       359 l~e~~~A~~~~~~~~~~k~~~~~  381 (381)
T PLN02740        359 FEKINEAFQLLEDGKALRCLLHL  381 (381)
T ss_pred             HHHHHHHHHHHHCCCceeEEEeC
Confidence            99999999999988888999863

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.4e-49  Score=368.78  Aligned_cols=338  Identities=53%  Similarity=0.954  Sum_probs=272.0

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||+.++|+|+.|.......  ..+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++|+|+....
T Consensus        41 lVkv~~~gic~sD~~~~~g~--~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~  118 (378)
T PLN02827         41 RIKVVSTSLCRSDLSAWESQ--ALFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGL  118 (378)
T ss_pred             EEEEEEEecChhHHHHhcCC--CCCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccc
Confidence            58999999999996543222  2468999999999999999999999999999999999999999999999999987432


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      .. .+....+....|...|..+.++...|+|+||+.+|++.++++|+++++++++.+++++.++|+++.+..++++|++|
T Consensus       119 ~~-~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~V  197 (378)
T PLN02827        119 ER-KGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSV  197 (378)
T ss_pred             cc-cccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEE
Confidence            10 00000000111112222222222348999999999999999999999999999998989999887777889999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      ||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|++.++++.+.+..+.+.+++.+++++|++||++|.+..+
T Consensus       198 lV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~  277 (378)
T PLN02827        198 VIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIA  277 (378)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence            99999999999999999999977889988999999999999999998875433477778887766899999999987789


Q ss_pred             HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414          241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI  320 (341)
Q Consensus       241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i  320 (341)
                      ..+++.+++++|+++.+|.......+......+.+++++.|+....+....++++++++++++++.+.++++++|+|+++
T Consensus       278 ~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~  357 (378)
T PLN02827        278 TTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEI  357 (378)
T ss_pred             HHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHH
Confidence            99999999844999999976543222222223568899998876544333578899999999999887789999999999


Q ss_pred             HHHHHHHhcCCcceEEEecCC
Q 019414          321 NKAFEYMVKGEGLRCIISMED  341 (341)
Q Consensus       321 ~ea~~~~~~~~~~k~vl~~~~  341 (341)
                      ++|++.+.+++..|+||.+++
T Consensus       358 ~~A~~~~~~~~~~k~vi~~~~  378 (378)
T PLN02827        358 NKAFELMREGKCLRCVIHMPK  378 (378)
T ss_pred             HHHHHHHHCCCceEEEEEecC
Confidence            999999999888899998863

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=5.7e-49  Score=365.60  Aligned_cols=337  Identities=51%  Similarity=0.911  Sum_probs=269.8

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|........ ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++|.|.+..
T Consensus        31 lIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~  110 (368)
T cd08300          31 RIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIR  110 (368)
T ss_pred             EEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCcc
Confidence            589999999999965433222 2357999999999999999999999999999999999999999999999999998754


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      .....|.. .+|...+..+|...++..+.|+|+||+.++++.++++|+++++++++.+++++.|||+++.+..++++|++
T Consensus       111 ~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~  189 (368)
T cd08300         111 ATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGST  189 (368)
T ss_pred             cccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCE
Confidence            32111111 01111122223222333345799999999999999999999999999999999999999878889999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+.++++.+.+++++++++|++||++|++..
T Consensus       190 VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~  269 (368)
T cd08300         190 VAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKV  269 (368)
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHH
Confidence            99999999999999999999997799999999999999999999999887653347778888877799999999998788


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE  319 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  319 (341)
                      +.++++++++++|+++.+|.......+......+.++..+.++..+.+...++++++++++.++++.+.++++++|+|+|
T Consensus       270 ~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~  349 (368)
T cd08300         270 MRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDE  349 (368)
T ss_pred             HHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHH
Confidence            99999999874499999997532222222222222344566666554434467889999999999988888999999999


Q ss_pred             HHHHHHHHhcCCcceEEEe
Q 019414          320 INKAFEYMVKGEGLRCIIS  338 (341)
Q Consensus       320 i~ea~~~~~~~~~~k~vl~  338 (341)
                      +++|++.+.+++..|++++
T Consensus       350 ~~~A~~~~~~~~~~k~~~~  368 (368)
T cd08300         350 INEAFDLMHAGKSIRTVVK  368 (368)
T ss_pred             HHHHHHHHhCCCCceeeeC
Confidence            9999999998888899874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=2.1e-48  Score=360.58  Aligned_cols=326  Identities=36%  Similarity=0.608  Sum_probs=268.6

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||+.++|+|+.|+..........+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++++|.....
T Consensus        30 lV~v~~~gi~~~D~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~  109 (358)
T TIGR03451        30 IVDIQACGVCHTDLHYREGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHN  109 (358)
T ss_pred             EEEEEEEeecHHHHHHhcCCccccCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccc
Confidence            58999999999996654333334579999999999999999999999999999999999999999999999999985322


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      .. .....        .+|.........|+|+||+.++++.++++|+++++++|+.+++.+.++|+++.+..++++|++|
T Consensus       110 ~~-~~~~~--------~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~V  180 (358)
T TIGR03451       110 AT-QKMTL--------TDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSV  180 (358)
T ss_pred             cc-ccccc--------ccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEE
Confidence            10 00000        0111100111248999999999999999999999999999999999999988888889999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDN  239 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~  239 (341)
                      ||+|+|++|++++|+||..|+++|++++++++|++.++++|++.++++.+.+  +.+.+++.+++ ++|++|||+|++..
T Consensus       181 lV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~i~~~~~~~g~d~vid~~g~~~~  258 (358)
T TIGR03451       181 AVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD--PVEAIRALTGGFGADVVIDAVGRPET  258 (358)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC--HHHHHHHHhCCCCCCEEEECCCCHHH
Confidence            9999999999999999999996799999999999999999999999887655  77888888876 89999999998788


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      ++.++++++++ |+++.+|.........+.. ..+.+++++.++........+++++++++++++++.+.++++++|+++
T Consensus       259 ~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~  337 (358)
T TIGR03451       259 YKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLD  337 (358)
T ss_pred             HHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHH
Confidence            99999999998 9999999764332222222 234578888887654322345788999999999998888889999999


Q ss_pred             cHHHHHHHHhcCCcceEEEe
Q 019414          319 EINKAFEYMVKGEGLRCIIS  338 (341)
Q Consensus       319 ~i~ea~~~~~~~~~~k~vl~  338 (341)
                      |+++|++.+++++..|+++.
T Consensus       338 ~~~~A~~~~~~~~~~k~~~~  357 (358)
T TIGR03451       338 DVEEAFDKMHAGDVLRSVVE  357 (358)
T ss_pred             HHHHHHHHHhCCCcceeEEe
Confidence            99999999999888888875

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-48  Score=355.45  Aligned_cols=308  Identities=20%  Similarity=0.327  Sum_probs=251.9

Q ss_pred             CccccccCCcCcceeeeccC---C-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG---Q-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~---~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|++|+.....+   . ...+|.++|||++|+|+++  ++++|++||||++.+..+|+.|++|+++++|+|+
T Consensus        31 lVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~  108 (343)
T PRK09880         31 LVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCT  108 (343)
T ss_pred             EEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCC
Confidence            68999999999997643222   2 2357999999999999999  7899999999999999999999999999999998


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      +.....   .      ..+        .....|+|+||++++++.++++|+++++++++ +..++++||+++. .....+
T Consensus       109 ~~~~~g---~------~~~--------~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~-~~~~~~  169 (343)
T PRK09880        109 TMRFFG---S------AMY--------FPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAH-QAGDLQ  169 (343)
T ss_pred             Ccceee---c------ccc--------cCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHHHHHHH-hcCCCC
Confidence            754321   0      000        00124799999999999999999999987644 6678899999864 456668


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      |++|+|+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++++++.+  +.+.. +. .+++|++|||+|+
T Consensus       170 g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~~-~~-~g~~D~vid~~G~  245 (343)
T PRK09880        170 GKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDD--LDHYK-AE-KGYFDVSFEVSGH  245 (343)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCccc--HHHHh-cc-CCCCCEEEECCCC
Confidence            99999999999999999999999997899999999999999999999999887654  43322 22 2369999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      +..++.++++++++ |+++.+|.......+++ ...+.+++++.++...    .+++++++++++++++.+.++++++|+
T Consensus       246 ~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~  319 (343)
T PRK09880        246 PSSINTCLEVTRAK-GVMVQVGMGGAPPEFPM-MTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYP  319 (343)
T ss_pred             HHHHHHHHHHhhcC-CEEEEEccCCCCCccCH-HHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEE
Confidence            78899999999998 99999997544333333 2234688889887643    257999999999999998888999999


Q ss_pred             CCcHHHHHHHHhcCCc-ceEEEec
Q 019414          317 FSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++|+++|++.+.+++. +|+++.+
T Consensus       320 l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        320 FTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEeC
Confidence            9999999999988775 6999875

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2.2e-47  Score=354.58  Aligned_cols=335  Identities=53%  Similarity=0.932  Sum_probs=269.6

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||+.++++|+.|+..........+|+++|||++|+|+++|++++++++||||++.+..+|++|++|+++.+++|++...
T Consensus        31 lVkv~~~gi~~sD~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~  110 (365)
T cd08277          31 RIKMLATSVCHTDILAIEGFKATLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRA  110 (365)
T ss_pred             EEEEEEEeechhhHHHhcCCCCCCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccc
Confidence            58999999999996654333335678999999999999999999999999999999999999999999999999998654


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ... |... ++..++...|.+..+....|+|+||++++.+.++++|+++++++++.+++++.|||+++.+..++++|++|
T Consensus       111 ~~~-g~~~-~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~v  188 (365)
T cd08277         111 NES-GLMP-DGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTV  188 (365)
T ss_pred             ccc-cccc-CCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEE
Confidence            311 1110 00011111121111222358999999999999999999999999999999999999998788899999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      ||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++.++++.+.+..+.+.+++.+++++|++||++|+...+
T Consensus       189 lV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~  268 (365)
T cd08277         189 AVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLM  268 (365)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHH
Confidence            99999999999999999999877999999999999999999999988766433356777777767899999999987888


Q ss_pred             HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414          241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI  320 (341)
Q Consensus       241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i  320 (341)
                      ..+++++++++|+++.+|..... ..+.....+.+++++.|+..+.+....++++++++++++.+.+.++++++|+++|+
T Consensus       269 ~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~  347 (365)
T cd08277         269 NEALESTKLGWGVSVVVGVPPGA-ELSIRPFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEI  347 (365)
T ss_pred             HHHHHhcccCCCEEEEEcCCCcc-ccccCHhHHhhCCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhH
Confidence            99999998733999999975422 12222222334788888876655434578999999999998888889999999999


Q ss_pred             HHHHHHHhcCCcceEEEe
Q 019414          321 NKAFEYMVKGEGLRCIIS  338 (341)
Q Consensus       321 ~ea~~~~~~~~~~k~vl~  338 (341)
                      ++|++.+.+++..|++++
T Consensus       348 ~~A~~~~~~~~~~k~~i~  365 (365)
T cd08277         348 NKGFDLMKSGECIRTVIT  365 (365)
T ss_pred             HHHHHHHHCCCCceEeeC
Confidence            999999988887898874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=2.2e-47  Score=351.40  Aligned_cols=309  Identities=29%  Similarity=0.486  Sum_probs=261.2

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||+.++++|+.|........  ...+|.++|||++|+|+++|++++++++||||++.+..+|+.|++|+++++|.|.+.
T Consensus        28 lV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~  107 (339)
T cd08239          28 LLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSK  107 (339)
T ss_pred             EEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCc
Confidence            589999999999965533322  123588999999999999999999999999999999999999999999999999875


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      ...  .|                   ....|+|+||++++.+.++++|+++++++|+.+++++.|||+++ +...+++|+
T Consensus       108 ~~~--~g-------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~  165 (339)
T cd08239         108 RAA--YG-------------------WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRD  165 (339)
T ss_pred             ccc--cc-------------------cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCC
Confidence            320  01                   11247999999999999999999999999999999999999996 567889999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      +|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.++++++.+   .+.+.+.+++ ++|++|||+|+.
T Consensus       166 ~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~---~~~~~~~~~~~~~d~vid~~g~~  242 (339)
T cd08239         166 TVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD---VQEIRELTSGAGADVAIECSGNT  242 (339)
T ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch---HHHHHHHhCCCCCCEEEECCCCH
Confidence            999999999999999999999995599999999999999999999999886542   4566677766 899999999997


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      ..++.++++++++ |+++.+|..... .+......+.+++++.|+.....   ++++++++++.++++.+.++++++|++
T Consensus       243 ~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~i~~~~~i~~~~~l  317 (339)
T cd08239         243 AARRLALEAVRPW-GRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSV---PDMEECAEFLARHKLEVDRLVTHRFGL  317 (339)
T ss_pred             HHHHHHHHHhhcC-CEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCH---HHHHHHHHHHHcCCCChhHeEEEEecH
Confidence            7778999999998 999999975432 22222233568899998876543   578999999999999888889999999


Q ss_pred             CcHHHHHHHHhcCCcceEEEec
Q 019414          318 SEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      +++++|++.+.+++.+|+|++|
T Consensus       318 ~~~~~a~~~~~~~~~gKvvi~~  339 (339)
T cd08239         318 DQAPEAYALFAQGESGKVVFVF  339 (339)
T ss_pred             HHHHHHHHHHHcCCceEEEEeC
Confidence            9999999999888778999875

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=1.2e-46  Score=345.74  Aligned_cols=314  Identities=29%  Similarity=0.417  Sum_probs=256.6

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCc-cccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPR-IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~-i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||+.++|+|-+|+.....+. ....|. ++|||++|+|+++| .++.+++||||++.|..+|+.|++|+++.+|+|++.
T Consensus        29 lVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~  107 (350)
T COG1063          29 LIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENP  107 (350)
T ss_pred             EEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCc
Confidence            589999999999966544433 334455 99999999999999 778899999999999999999999999999999965


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEE-CCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK-INPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~-lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      .+......                 ....+|+|+||+++|.+.+++ +|+++ ..+++++.+++++++++........++
T Consensus       108 ~~~g~~~~-----------------~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~  169 (350)
T COG1063         108 GFYGYAGL-----------------GGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPG  169 (350)
T ss_pred             cccccccc-----------------cCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCC
Confidence            44311100                 001247999999999765555 58888 677788999999998874444555666


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      ++|+|+|+|++|++++++++.+|+.+|++++.+++|++++++ .|++.+++..+.+  ....+.+.+.+ ++|++|||+|
T Consensus       170 ~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~--~~~~~~~~t~g~g~D~vie~~G  247 (350)
T COG1063         170 GTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDD--AGAEILELTGGRGADVVIEAVG  247 (350)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcccc--HHHHHHHHhCCCCCCEEEECCC
Confidence            699999999999999999999999999999999999999999 6667666665543  77788888888 9999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcc-cccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      .+..+++++++++++ |+++++|....... ++. ...+.|++++.|+....  ...+++.+++++++|++.+.++++++
T Consensus       248 ~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~~~~~-~~~~~kel~l~gs~~~~--~~~~~~~~~~ll~~g~i~~~~lit~~  323 (350)
T COG1063         248 SPPALDQALEALRPG-GTVVVVGVYGGEDIPLPA-GLVVSKELTLRGSLRPS--GREDFERALDLLASGKIDPEKLITHR  323 (350)
T ss_pred             CHHHHHHHHHHhcCC-CEEEEEeccCCccCccCH-HHHHhcccEEEeccCCC--CcccHHHHHHHHHcCCCChhHceEee
Confidence            988999999999998 99999998766542 222 23467899999984311  12579999999999999999999999


Q ss_pred             ecCCcHHHHHHHHhcCCc--ceEEEec
Q 019414          315 IPFSEINKAFEYMVKGEG--LRCIISM  339 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~~--~k~vl~~  339 (341)
                      ++++++++|++.+.+.+.  .|+++.+
T Consensus       324 ~~~~~~~~a~~~~~~~~~~~~Kv~i~~  350 (350)
T COG1063         324 LPLDDAAEAYELFADRKEEAIKVVLKP  350 (350)
T ss_pred             ccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            999999999999987653  5998864

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=3.8e-46  Score=348.06  Aligned_cols=321  Identities=21%  Similarity=0.291  Sum_probs=246.9

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|++|+..........+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|++|+|.+...
T Consensus        37 lVkv~a~gIcgsD~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~  116 (393)
T TIGR02819        37 ILKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNP  116 (393)
T ss_pred             EEEEEEeeecHHHHHHHCCCCCCCCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCC
Confidence            68999999999996654332233579999999999999999999999999999999999999999999999999997532


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCc----hhhhhccccchhhhhhhhhhcCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPL----DKVCILSCGVSTGLGATLNVAKP  154 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~----~~aa~l~~~~~ta~~~l~~~~~~  154 (341)
                      +.. +..     .++...|      ...|+|+||+++|+.  .++++|++++.    ..++++.+++.++|+++ +..++
T Consensus       117 ~~~-~~~-----~g~~~~~------~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~  183 (393)
T TIGR02819       117 ARA-GAA-----YGYVDMG------GWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGV  183 (393)
T ss_pred             CCc-cce-----ecccccC------CCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCC
Confidence            110 000     0100000      013799999999964  79999998753    35677888999999986 45789


Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~  233 (341)
                      ++|++|||.|+|++|++++|+|+.+|++.|++++++++|+++++++|++.+....+.+  +.+.+.+.+++ ++|++||+
T Consensus       184 ~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~--~~~~v~~~~~~~g~Dvvid~  261 (393)
T TIGR02819       184 GPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDAT--LPEQIEQILGEPEVDCAVDC  261 (393)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCccc--HHHHHHHHcCCCCCcEEEEC
Confidence            9999999998999999999999999996677778889999999999997533222333  66778887776 89999999


Q ss_pred             cCCh--------------HHHHHHHHHhcCCCcEEEEEccCCC-Cc-ccc---------cc-cceeeecceEEEeeecCC
Q 019414          234 TGNI--------------DNMISAFECVHDGWGVAVLVGVPSK-DA-VFM---------TK-PINVLNERTLKGTFFGNY  287 (341)
Q Consensus       234 ~g~~--------------~~~~~~~~~l~~~~g~~v~~g~~~~-~~-~~~---------~~-~~~~~~~~~~~g~~~~~~  287 (341)
                      +|.+              ..+++++++++++ |+++.+|.... +. ..+         .. ...+.+++++.+..   .
T Consensus       262 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~  337 (393)
T TIGR02819       262 VGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---T  337 (393)
T ss_pred             CCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---C
Confidence            9985              4899999999998 99999998632 11 111         00 11123445555421   1


Q ss_pred             CCCCCHHHHHHHHHCCCCCCCCcee-eeecCCcHHHHHHHHhcCCcceEEEecC
Q 019414          288 KPRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       288 ~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                      ...+.+++++++++++++.+.++++ ++|+|+++++|++.+.+++.+|+++++.
T Consensus       338 ~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~  391 (393)
T TIGR02819       338 PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH  391 (393)
T ss_pred             ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence            1112347899999999998877777 7899999999999999887889999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-45  Score=335.31  Aligned_cols=312  Identities=22%  Similarity=0.337  Sum_probs=255.1

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++++|+.|...........+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+.+.++.|.....
T Consensus        29 lV~v~~~gi~~~D~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~  108 (347)
T PRK10309         29 LVKVASSGLCGSDIPRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDF  108 (347)
T ss_pred             EEEEEEEEEchhcHHHHhCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcce
Confidence            58999999999996432111112368899999999999999999999999999999999999999999999999976432


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ..                      ....|+|+||+.++++.++++|+++++++|+.+. ++++++++ .+...+++|++|
T Consensus       109 ~g----------------------~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~-~~~~~~~~g~~v  164 (347)
T PRK10309        109 IG----------------------SRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNV  164 (347)
T ss_pred             ec----------------------cCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH-HHhcCCCCCCEE
Confidence            10                      1124799999999999999999999999988763 45667877 466788999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-Ccc-EEEeccCChH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD-RSVECTGNID  238 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d-~vld~~g~~~  238 (341)
                      ||+|+|++|++++|+|+.+|++.|+++++++++++.++++|++.++++++.+   .+.+.+.+.+ ++| ++|||+|.+.
T Consensus       165 lV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~---~~~~~~~~~~~~~d~~v~d~~G~~~  241 (347)
T PRK10309        165 IIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS---APQIQSVLRELRFDQLILETAGVPQ  241 (347)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC---HHHHHHHhcCCCCCeEEEECCCCHH
Confidence            9999999999999999999996689999999999999999999998876543   3446666665 888 9999999878


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcccccc--cceeeecceEEEeeecCCC--CCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTK--PINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      .+.+++++++++ |+++.+|....+..++..  ...+.+++++.|+..+...  ..+++++++++++++++.+.++++++
T Consensus       242 ~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~  320 (347)
T PRK10309        242 TVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHR  320 (347)
T ss_pred             HHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEE
Confidence            999999999998 999999976543222211  1235678899987654221  12578899999999999888889999


Q ss_pred             ecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          315 IPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      |+|+|+++|++.+.+++. +|+|++++
T Consensus       321 ~~l~~~~~A~~~~~~~~~~gKvvv~~~  347 (347)
T PRK10309        321 GSFESFAQAVRDLAGNPMPGKVLLQIP  347 (347)
T ss_pred             eeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence            999999999999988875 59999764

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=4.1e-45  Score=338.34  Aligned_cols=309  Identities=21%  Similarity=0.327  Sum_probs=244.1

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+....... ...+|.++|||++|+|+++|++|++|++||||++.+. .+|+.|++|++|.+|+|++.
T Consensus        41 lV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~  120 (360)
T PLN02586         41 TVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKM  120 (360)
T ss_pred             EEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCc
Confidence            589999999999965432211 2356899999999999999999999999999986544 57999999999999999875


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .+...          ....+|     ....|+|+||+++|++.++++|+++++++||++++.+.|+|+++.....+++|+
T Consensus       121 ~~~~~----------~~~~~g-----~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~  185 (360)
T PLN02586        121 IFTYN----------SIGHDG-----TKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGK  185 (360)
T ss_pred             ccccc----------ccccCC-----CcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCC
Confidence            43100          000011     011379999999999999999999999999999999999999876666778999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|||.|+|++|++++|+||.+|+ +|++++.++++ .+.++++|++.++++.+.     +.+++.++ ++|++||++|++
T Consensus       186 ~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~-----~~~~~~~~-~~D~vid~~g~~  258 (360)
T PLN02586        186 HLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTDP-----EKMKAAIG-TMDYIIDTVSAV  258 (360)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCCH-----HHHHhhcC-CCCEEEECCCCH
Confidence            99999999999999999999999 67776666555 556788999988876542     23444443 699999999987


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      ..+++++++++++ |+++.+|.......++.. ..+.++..+.++..+..   .++++++++++++++.+.  + ++|+|
T Consensus       259 ~~~~~~~~~l~~~-G~iv~vG~~~~~~~~~~~-~~~~~~~~i~g~~~~~~---~~~~~~~~li~~g~i~~~--~-~~~~l  330 (360)
T PLN02586        259 HALGPLLGLLKVN-GKLITLGLPEKPLELPIF-PLVLGRKLVGGSDIGGI---KETQEMLDFCAKHNITAD--I-ELIRM  330 (360)
T ss_pred             HHHHHHHHHhcCC-cEEEEeCCCCCCCccCHH-HHHhCCeEEEEcCcCCH---HHHHHHHHHHHhCCCCCc--E-EEEeH
Confidence            7899999999998 999999965433333332 22446677777664432   468999999999988753  3 68999


Q ss_pred             CcHHHHHHHHhcCCc-ceEEEec
Q 019414          318 SEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +|+++|++.+.+++. +|+|+.+
T Consensus       331 ~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        331 DEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHHHHHHHHHHcCCCcEEEEEEc
Confidence            999999999999886 5999876

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.4e-45  Score=338.17  Aligned_cols=309  Identities=22%  Similarity=0.324  Sum_probs=245.7

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+....... ...+|.++|||++|+|+++|+++++|++||||++.+.. +|+.|++|+++++|+|++.
T Consensus        35 lVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~  114 (375)
T PLN02178         35 TVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKV  114 (375)
T ss_pred             EEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCc
Confidence            589999999999965432221 23468999999999999999999999999999877665 6999999999999999985


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcC-CCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK-PERG  157 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~g  157 (341)
                      .+...       .   +...|     ....|+|+||+++|++.++++|+++++++++++++...|+|+++..... .++|
T Consensus       115 ~~~~~-------~---~~~~g-----~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g  179 (375)
T PLN02178        115 VFTYN-------S---RSSDG-----TRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESG  179 (375)
T ss_pred             ccccc-------c---cccCC-----CcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCC
Confidence            43100       0   00001     0113799999999999999999999999999999999999998754433 4689


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      ++|+|.|+|++|++++|+||.+|+ +|++++.+++ +.+.++++|++.++++.+.     +.+++.++ ++|++|||+|.
T Consensus       180 ~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~-----~~v~~~~~-~~D~vid~~G~  252 (375)
T PLN02178        180 KRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTDS-----QKMKEAVG-TMDFIIDTVSA  252 (375)
T ss_pred             CEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcCH-----HHHHHhhC-CCcEEEECCCc
Confidence            999999999999999999999999 6787776654 4778899999998876542     23444443 69999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      +..+.+++++++++ |+++.+|.......++.. ..+.+++++.|+.....   ++++++++++++|++.+.  + +.|+
T Consensus       253 ~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~~~~-~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~~~--i-~~~~  324 (375)
T PLN02178        253 EHALLPLFSLLKVS-GKLVALGLPEKPLDLPIF-PLVLGRKMVGGSQIGGM---KETQEMLEFCAKHKIVSD--I-ELIK  324 (375)
T ss_pred             HHHHHHHHHhhcCC-CEEEEEccCCCCCccCHH-HHHhCCeEEEEeCccCH---HHHHHHHHHHHhCCCccc--E-EEEe
Confidence            77889999999998 999999975433333332 23457888888775543   578999999999988654  3 6799


Q ss_pred             CCcHHHHHHHHhcCCc-ceEEEec
Q 019414          317 FSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      |+|+++|++.+.+++. +|+|+.+
T Consensus       325 l~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        325 MSDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             HHHHHHHHHHHHcCCCceEEEEEe
Confidence            9999999999998886 5999876

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=3.9e-45  Score=331.51  Aligned_cols=286  Identities=26%  Similarity=0.361  Sum_probs=233.9

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++|+|+||.|.........  .++|+|||.|++|+|+++|++|++|++||||+..+ ..|                 
T Consensus        31 lVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~-~~~-----------------   92 (326)
T COG0604          31 LVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALG-GVG-----------------   92 (326)
T ss_pred             EEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEcc-CCC-----------------
Confidence            6899999999999666544323  34899999999999999999999999999999873 000                 


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                  ..|+|+||+.+|++.++++|+++|+++||++++++.|||+++....++++|+
T Consensus        93 ----------------------------~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~  144 (326)
T COG0604          93 ----------------------------RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGE  144 (326)
T ss_pred             ----------------------------CCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence                                        1379999999999999999999999999999999999999999989999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|||+|+ |++|++++||||.+|+ .++++.+++++.++++++|+++++++.+.+  +.+.+++++++ ++|+|||++|+
T Consensus       145 ~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~--~~~~v~~~t~g~gvDvv~D~vG~  221 (326)
T COG0604         145 TVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYREED--FVEQVRELTGGKGVDVVLDTVGG  221 (326)
T ss_pred             EEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCccc--HHHHHHHHcCCCCceEEEECCCH
Confidence            9999985 9999999999999998 666666777777799999999999998887  99999999998 99999999988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCC--C-CCCCHHHHHHHHHCCCCCCCCcee
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNY--K-PRTDLPSVVDMYMNKQLELEKFIT  312 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~--~-~~~~~~~~~~~~~~~~i~~~~~~~  312 (341)
                       +.+..++++++++ |+++.+|...+....... ..++.+.++..+......  . ..+.++++++++.+|++++.  ++
T Consensus       222 -~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~  297 (326)
T COG0604         222 -DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV--ID  297 (326)
T ss_pred             -HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcce--ec
Confidence             7888999999998 999999987631111121 222346666676655432  1 12467779999999977555  67


Q ss_pred             eeecCCcHHHHHHHHhc-CC-cceEEEec
Q 019414          313 HRIPFSEINKAFEYMVK-GE-GLRCIISM  339 (341)
Q Consensus       313 ~~~~~~~i~ea~~~~~~-~~-~~k~vl~~  339 (341)
                      .+|++++..++...... ++ .+|+|+++
T Consensus       298 ~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         298 RVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             cEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            89999996555553333 34 46999874

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.8e-44  Score=333.14  Aligned_cols=308  Identities=21%  Similarity=0.388  Sum_probs=255.7

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||+.++|+|+.|......+.  ...+|.++|||++|+|+++|++++.+ +||||++.+..+|++|++|+++++|+|...
T Consensus        27 lVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~  105 (349)
T TIGR03201        27 VVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQ  105 (349)
T ss_pred             EEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCC
Confidence            589999999999965432222  23568999999999999999999887 999999999999999999999999999875


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCC------CCCchhhhhccccchhhhhhhhhhc
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP------LAPLDKVCILSCGVSTGLGATLNVA  152 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~------~~~~~~aa~l~~~~~ta~~~l~~~~  152 (341)
                      ....                      ....|+|+||++++.+.++++|+      +++++.++.+++++.++|+++. ..
T Consensus       106 ~~~g----------------------~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~  162 (349)
T TIGR03201       106 KMPG----------------------NDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QA  162 (349)
T ss_pred             CccC----------------------cCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hc
Confidence            4320                      11137999999999999999999      8999999999999999999864 57


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC-hhHHHHHHHHhcC-Ccc--
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNG-GVD--  228 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~~~i~~~~~~-~~d--  228 (341)
                      .+++|++|+|+|+|++|++++|+|+..|+ +|++++++++|++.++++|++.++++.+.+ .++.+.+++.+++ ++|  
T Consensus       163 ~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~  241 (349)
T TIGR03201       163 GLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRST  241 (349)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCC
Confidence            89999999999999999999999999999 799999999999999999999988876543 2367778888876 776  


Q ss_pred             --EEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          229 --RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       229 --~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                        ++|||+|+...++.++++++++ |+++.+|.......+++. ..+.++.++.|++....   .+++++++++.++++.
T Consensus       242 ~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~~g~~~~~~---~~~~~~~~~i~~g~i~  316 (349)
T TIGR03201       242 GWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYRLS-NLMAFHARALGNWGCPP---DRYPAALDLVLDGKIQ  316 (349)
T ss_pred             cCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcccCHH-HHhhcccEEEEEecCCH---HHHHHHHHHHHcCCCC
Confidence              8999999988888999999998 999999976543333322 22345677777764332   5799999999999998


Q ss_pred             CCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          307 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       307 ~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +.++++ .|+|+++++|++.+++++. +|+++++
T Consensus       317 ~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       317 LGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             cccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence            877664 7999999999999998885 4888753

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=1.6e-43  Score=329.32  Aligned_cols=337  Identities=45%  Similarity=0.789  Sum_probs=265.7

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||+.++++|+.|...........+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+++++|+|+....
T Consensus        36 lvkv~~~gi~~~D~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~  115 (373)
T cd08299          36 RIKIVATGICRSDDHVVSGKLVTPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDL  115 (373)
T ss_pred             EEEEEEEEcCcccHHHhcCCCCCCCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCccc
Confidence            57899999999996554333334578899999999999999999999999999999999999999999999999987543


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ....++.. ++..+....|....+....|+|+||++++.+.++++|+++++++++.+++++.+||+++....++++|++|
T Consensus       116 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~V  194 (373)
T cd08299         116 GKPQGLMQ-DGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTC  194 (373)
T ss_pred             cccccccc-CCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEE
Confidence            22222221 11111112222222222358999999999999999999999999999999999999998888899999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      +|+|+|++|++++++|+.+|+.+|+++++++++++.++++|++.+++..+.+.++.+.+++++.+++|+++||+|++..+
T Consensus       195 lV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~  274 (373)
T cd08299         195 AVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTM  274 (373)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHH
Confidence            99988999999999999999867999999999999999999999988765443366667776666899999999977778


Q ss_pred             HHHHHHh-cCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414          241 ISAFECV-HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE  319 (341)
Q Consensus       241 ~~~~~~l-~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  319 (341)
                      ..++..+ +++ |+++.+|.......++..+..+.++.++.++....+.....+.++++.+.++.+.+.+++++.|++++
T Consensus       275 ~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e  353 (373)
T cd08299         275 KAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEK  353 (373)
T ss_pred             HHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHH
Confidence            8877765 466 99999997543323333332234677888877655433346777888888887777777889999999


Q ss_pred             HHHHHHHHhcCCcceEEEec
Q 019414          320 INKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       320 i~ea~~~~~~~~~~k~vl~~  339 (341)
                      +++|++.+.+++..|+++++
T Consensus       354 ~~~a~~~~~~~~~~k~~~~~  373 (373)
T cd08299         354 INEGFDLLRSGKSIRTVLTF  373 (373)
T ss_pred             HHHHHHHHhCCCcceEEEeC
Confidence            99999999888778988864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.2e-43  Score=326.72  Aligned_cols=336  Identities=44%  Similarity=0.803  Sum_probs=273.3

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||+.++++|+.|+..........+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+++++++|.....
T Consensus        29 lv~v~~~~i~~~d~~~~~g~~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (365)
T cd05279          29 RIKVVATGVCHTDLHVIDGKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRG  108 (365)
T ss_pred             EEEEEEeeecchhHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCccc
Confidence            57899999999996544333334568899999999999999999999999999999999999999999999999988765


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ...-|. ..+|...|...|....+..+.|+|++|+.++++.++++|+++++++++.+++++.+||+++.+.+++.+|++|
T Consensus       109 ~~~~g~-~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~v  187 (365)
T cd05279         109 TNGRGL-MSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTC  187 (365)
T ss_pred             cccccc-ccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEE
Confidence            543332 1233334444444333444568999999999999999999999999999999999999998888899999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      ||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++.+++.++.+..+.+.+++.+++++|++||++|....+
T Consensus       188 lI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~  267 (365)
T cd05279         188 AVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTL  267 (365)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHH
Confidence            99988999999999999999967888888999999999999999988776532377777777766999999999877889


Q ss_pred             HHHHHHhc-CCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414          241 ISAFECVH-DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE  319 (341)
Q Consensus       241 ~~~~~~l~-~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  319 (341)
                      ..++++++ ++ |+++.+|.........+....+.++.++.|+...++...+.++.++++++++.+.+.+++++.+++++
T Consensus       268 ~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~  346 (365)
T cd05279         268 KQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEE  346 (365)
T ss_pred             HHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHH
Confidence            99999999 87 99999986532112222222225677788876655544467889999999998887667789999999


Q ss_pred             HHHHHHHHhcCCcceEEEe
Q 019414          320 INKAFEYMVKGEGLRCIIS  338 (341)
Q Consensus       320 i~ea~~~~~~~~~~k~vl~  338 (341)
                      +++|++.+.+++..|++|+
T Consensus       347 ~~~a~~~~~~~~~~~~~~~  365 (365)
T cd05279         347 INDGFDLMRSGESIRTILT  365 (365)
T ss_pred             HHHHHHHHhCCCceeeeeC
Confidence            9999999988877788764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2e-43  Score=323.24  Aligned_cols=294  Identities=19%  Similarity=0.274  Sum_probs=242.2

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|......... ..+|.++|||++|+|+++|++++++++||||++.+. .+|+.|++|+++++|+|...
T Consensus        31 lVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~  110 (329)
T TIGR02822        31 LVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPAS  110 (329)
T ss_pred             EEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCc
Confidence            5899999999999654422221 234789999999999999999999999999988765 47999999999999999875


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .+.            |          ....|+|+||+.+++..++++|+++++++++++++++.|||+++. ..++++|+
T Consensus       111 ~~~------------g----------~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~g~  167 (329)
T TIGR02822       111 RYT------------G----------WDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL-RASLPPGG  167 (329)
T ss_pred             ccC------------C----------cccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHH-hcCCCCCC
Confidence            432            1          112479999999999999999999999999999999999999974 57899999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|||+|+|++|++++|+|+..|+ +|++++++++|+++++++|++.++++.+..           .+++|+++++.+.+.
T Consensus       168 ~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~-----------~~~~d~~i~~~~~~~  235 (329)
T TIGR02822       168 RLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDTP-----------PEPLDAAILFAPAGG  235 (329)
T ss_pred             EEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccccC-----------cccceEEEECCCcHH
Confidence            99999999999999999999999 799999999999999999999998754321           136899999888878


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      .++.++++++++ |+++.+|..... ..++. ...+.+++++.++.....   .++.+++++++++++.   +++++|+|
T Consensus       236 ~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~---~i~~~~~l  307 (329)
T TIGR02822       236 LVPPALEALDRG-GVLAVAGIHLTDTPPLNY-QRHLFYERQIRSVTSNTR---ADAREFLELAAQHGVR---VTTHTYPL  307 (329)
T ss_pred             HHHHHHHhhCCC-cEEEEEeccCccCCCCCH-HHHhhCCcEEEEeecCCH---HHHHHHHHHHHhCCCe---eEEEEEeH
Confidence            999999999998 999999974322 22222 122457888887754322   4688899999999875   35789999


Q ss_pred             CcHHHHHHHHhcCCcc-eEEE
Q 019414          318 SEINKAFEYMVKGEGL-RCII  337 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~~-k~vl  337 (341)
                      +|+++|++.+.+++.. |+|+
T Consensus       308 ~~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       308 SEADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHHHHHcCCCceEEEe
Confidence            9999999999988864 8876

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.7e-43  Score=326.13  Aligned_cols=305  Identities=26%  Similarity=0.343  Sum_probs=237.9

Q ss_pred             CccccccCCcCcceeeeccCC--CC--CCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TP--LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~--~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|+.|+.......  .+  .+|.++|||++|+|+++|++ +.|++||||++.+..+|+.|++|+++++++|+
T Consensus        29 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~  107 (355)
T cd08230          29 LVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCE  107 (355)
T ss_pred             EEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCC
Confidence            689999999999976543321  11  35789999999999999999 99999999999998999999999999999998


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhh------
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN------  150 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~------  150 (341)
                      ...+..          .|.         ....|+|+||+.++++.++++|++++  +++++.+++++++.++..      
T Consensus       108 ~~~~~~----------~g~---------~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a~~~~~~~~~  166 (355)
T cd08230         108 TGEYTE----------RGI---------KGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQAEAVQK  166 (355)
T ss_pred             Ccceec----------cCc---------CCCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHHHHHHhhhhh
Confidence            753310          000         01237999999999999999999998  345555666666555322      


Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~---~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      ...+++|++|+|+|+|++|++++|+||..|+ +|+++++   +++|+++++++|++. +++.+.+  +.+ . . ..+++
T Consensus       167 ~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~--~~~-~-~-~~~~~  239 (355)
T cd08230         167 RLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSKTP--VAE-V-K-LVGEF  239 (355)
T ss_pred             hcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCccc--hhh-h-h-hcCCC
Confidence            2236789999999999999999999999999 7888887   688999999999986 4555433  333 2 1 23489


Q ss_pred             cEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-----cceeeecceEEEeeecCCCCCCCHHHHHHHHHC
Q 019414          228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-----PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMN  302 (341)
Q Consensus       228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  302 (341)
                      |++|||+|++..++.++++++++ |+++.+|.......+++.     ...+.+++++.|+.....   ++++++++++.+
T Consensus       240 d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~---~~~~~~~~~l~~  315 (355)
T cd08230         240 DLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANK---RHFEQAVEDLAQ  315 (355)
T ss_pred             CEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCch---hhHHHHHHHHHh
Confidence            99999999877899999999998 999999976542222222     223558899998765433   578999999988


Q ss_pred             CCC----CCCCceeeeecCCcHHHHHHHHhcCCcceEEEec
Q 019414          303 KQL----ELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       303 ~~i----~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      +.+    .+.++++++|+++|+++|++.+.++. .|+||+|
T Consensus       316 ~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~  355 (355)
T cd08230         316 WKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW  355 (355)
T ss_pred             cccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence            762    35667899999999999999886554 6999875

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.7e-42  Score=320.41  Aligned_cols=308  Identities=30%  Similarity=0.475  Sum_probs=258.0

Q ss_pred             CccccccCCcCcceeeeccCC--C----------CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--T----------PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR   68 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~----------~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~   68 (341)
                      |||+.++++|+.|......+.  .          ..+|.++|||++|+|+++|++++++++||+|++.+..+|++|.+|+
T Consensus        28 lV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~  107 (351)
T cd08233          28 KIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACK  107 (351)
T ss_pred             EEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHh
Confidence            589999999999964322111  0          1368899999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhh
Q 019414           69 SDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT  148 (341)
Q Consensus        69 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l  148 (341)
                      ++++++|....+..            +.         ...|+|+||+.++.+.++++|+++++++++.+ .++.|||+++
T Consensus       108 ~~~~~~~~~~~~~~------------~~---------~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l  165 (351)
T cd08233         108 RGLYNLCDSLGFIG------------LG---------GGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV  165 (351)
T ss_pred             CcCcccCCCCceec------------cC---------CCCCceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH
Confidence            99999998654311            00         01379999999999999999999999988765 6788999997


Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-Cc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV  227 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~  227 (341)
                       ...++++|++|+|+|+|.+|++++|+|+.+|+++|+++++++++.+.++++|++.++++++.+  +.+.+++.+++ ++
T Consensus       166 -~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~--~~~~l~~~~~~~~~  242 (351)
T cd08233         166 -RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVD--VVAEVRKLTGGGGV  242 (351)
T ss_pred             -HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccC--HHHHHHHHhCCCCC
Confidence             778899999999999999999999999999997889998999999999999999999987766  88888888876 79


Q ss_pred             cEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCC
Q 019414          228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL  307 (341)
Q Consensus       228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~  307 (341)
                      |++||++|++..++.++++++++ |+++.+|.......++. ...+.+++++.++.....   +++++++++++++++.+
T Consensus       243 d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~l~~  317 (351)
T cd08233         243 DVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKPISFNP-NDLVLKEKTLTGSICYTR---EDFEEVIDLLASGKIDA  317 (351)
T ss_pred             CEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCCCccCH-HHHHhhCcEEEEEeccCc---chHHHHHHHHHcCCCCh
Confidence            99999999878899999999998 99999997653322222 123457888888764432   67999999999999987


Q ss_pred             CCceeeeecCCcH-HHHHHHHhcCCc--ceEEEe
Q 019414          308 EKFITHRIPFSEI-NKAFEYMVKGEG--LRCIIS  338 (341)
Q Consensus       308 ~~~~~~~~~~~~i-~ea~~~~~~~~~--~k~vl~  338 (341)
                      .++++++|+++|+ ++|++.+.+++.  +|+||.
T Consensus       318 ~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         318 EPLITSRIPLEDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             HHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence            7778899999996 799999988874  688873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=2.1e-42  Score=320.92  Aligned_cols=320  Identities=25%  Similarity=0.401  Sum_probs=259.9

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCC------CCCCCEEEecccCCCCCChhhcCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSD------LEVGDHVLPVFTGECGDCRHCRSDVSN   73 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~------~~~Gd~V~~~~~~~c~~c~~c~~~~~~   73 (341)
                      |||+.++++|+.|+........ ..+|.++|||++|+|+++|+++++      |++||+|++.+..+|+.|.+|+.+.+|
T Consensus        29 lV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~  108 (361)
T cd08231          29 LVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPT  108 (361)
T ss_pred             EEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCcc
Confidence            5899999999999665433222 467889999999999999999986      999999999999999999999999999


Q ss_pred             CCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecC-ceEECCCCCCchhhhhccccchhhhhhhhhhc
Q 019414           74 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVA  152 (341)
Q Consensus        74 ~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~  152 (341)
                      +|....+.+...          . .+.    ....|+|+||+.++++ .++++|++++.++++.+++++.|||+++.+..
T Consensus       109 ~c~~~~~~~~~~----------~-~~~----~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~  173 (361)
T cd08231         109 KCENRKKYGHEA----------S-CDD----PHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAG  173 (361)
T ss_pred             ccccchhccccc----------c-ccC----CCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhcc
Confidence            998765431100          0 000    0013799999999996 79999999999999988899999999987766


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC-hhHHHHHHHHhcC-CccEE
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNG-GVDRS  230 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~~~i~~~~~~-~~d~v  230 (341)
                      ..++|++|||+|+|++|++++++|+.+|++.|+++++++++.+.++++|++.++++++.+ ..+.+.+++.+++ ++|++
T Consensus       174 ~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~v  253 (361)
T cd08231         174 PVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVV  253 (361)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEE
Confidence            677999999999899999999999999997788888999999999999999888876543 1233567777776 89999


Q ss_pred             EeccCChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCC--CCCC
Q 019414          231 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLEL  307 (341)
Q Consensus       231 ld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~i~~  307 (341)
                      ||++|+...++.++++++++ |+++.+|.........+.. ..+.+++++.++.....   ++++++++++.++  .+.+
T Consensus       254 id~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  329 (361)
T cd08231         254 IEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDP---SHLYRAVRFLERTQDRFPF  329 (361)
T ss_pred             EECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCc---hhHHHHHHHHHhccCcCCc
Confidence            99998877889999999998 9999999654322222222 12557888887765433   5789999999988  6667


Q ss_pred             CCceeeeecCCcHHHHHHHHhcCCcceEEEec
Q 019414          308 EKFITHRIPFSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       308 ~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      .+++++.|+++++++|++.+.+++.+|+||.+
T Consensus       330 ~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~  361 (361)
T cd08231         330 AELVTHRYPLEDINEALELAESGTALKVVIDP  361 (361)
T ss_pred             hhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence            77788999999999999999888778999864

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.3e-42  Score=311.09  Aligned_cols=268  Identities=26%  Similarity=0.404  Sum_probs=219.8

Q ss_pred             cccccceEEEEEecCCCC------CCCCCCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCc
Q 019414           28 IFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP  101 (341)
Q Consensus        28 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~  101 (341)
                      ++|||++|+|+++|++|+      ++++||||++.+..+|+.|++|+++++|+|++..+....            ..+  
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~------------~~~--   66 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHE------------ALD--   66 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcc------------ccc--
Confidence            589999999999999999      899999999999999999999999999999886543100            000  


Q ss_pred             cccccCCCcccceEEeecC-ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Q 019414          102 VNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG  180 (341)
Q Consensus       102 ~~~~~~~g~~ae~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g  180 (341)
                       .+...+|+|+||+++|++ .++++|+++++++++.+++.+.|+|+++. .....+|++|||+|+|++|++++|+||.+|
T Consensus        67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G  144 (280)
T TIGR03366        67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAG  144 (280)
T ss_pred             -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence             001124799999999997 79999999999999999999999999864 455669999999999999999999999999


Q ss_pred             CCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          181 ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       181 ~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +++|++++++++|+++++++|++.++++.+    ..+.+++.+.+ ++|++||++|.+..+++++++++++ |+++.+|.
T Consensus       145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~  219 (280)
T TIGR03366       145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS  219 (280)
T ss_pred             CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence            966899999999999999999998887643    34456666666 8999999999888899999999998 99999996


Q ss_pred             CCC--CcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCC--CCCCCCceeeeecCCcH
Q 019414          260 PSK--DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEI  320 (341)
Q Consensus       260 ~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~i  320 (341)
                      ...  ...++. ...+.+++++.|+..+..   ++++++++++.++  ++.+.++++++|+++|+
T Consensus       220 ~~~~~~~~i~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       220 VFPGGPVALDP-EQVVRRWLTIRGVHNYEP---RHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             CCCCCceeeCH-HHHHhCCcEEEecCCCCH---HHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence            532  222222 233568999998764432   5799999999974  67777889999999874

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.2e-42  Score=317.48  Aligned_cols=310  Identities=22%  Similarity=0.357  Sum_probs=245.1

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||+.++++|+.|+....... ...+|.++|||++|+|+++|+++++|++||+|++.+.. +|+.|++|+++.+++|...
T Consensus        38 lVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~  117 (357)
T PLN02514         38 VIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKR  117 (357)
T ss_pred             EEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCc
Confidence            589999999999965442221 23468999999999999999999999999999876544 7999999999999999875


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .+..       +  .++ ..|     ....|+|+||++++.+.++++|+++++++++++++++.|||+++......++|+
T Consensus       118 ~~~~-------~--~~~-~~g-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~  182 (357)
T PLN02514        118 IWSY-------N--DVY-TDG-----KPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGL  182 (357)
T ss_pred             cccc-------c--ccc-cCC-----ccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCC
Confidence            3210       0  000 011     112479999999999999999999999999999999999999976666678999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +++|+|+|++|++++|+||..|+ +++++++++++++. ++++|++.++++.+.     +.+.+.+ .++|++||++|..
T Consensus       183 ~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~-----~~~~~~~-~~~D~vid~~g~~  255 (357)
T PLN02514        183 RGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSDA-----AEMQEAA-DSLDYIIDTVPVF  255 (357)
T ss_pred             eEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCCh-----HHHHHhc-CCCcEEEECCCch
Confidence            99999989999999999999999 67777777766654 567999887765432     2334443 3699999999987


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      ..++.++++++++ |+++.+|.......++. ...+.+++++.|+.....   .++++++++++++++.  +++ ++|++
T Consensus       256 ~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~g~l~--~~i-~~~~l  327 (357)
T PLN02514        256 HPLEPYLSLLKLD-GKLILMGVINTPLQFVT-PMLMLGRKVITGSFIGSM---KETEEMLEFCKEKGLT--SMI-EVVKM  327 (357)
T ss_pred             HHHHHHHHHhccC-CEEEEECCCCCCCcccH-HHHhhCCcEEEEEecCCH---HHHHHHHHHHHhCCCc--CcE-EEEcH
Confidence            7899999999998 99999997643323332 223567889998876543   4789999999999764  344 68999


Q ss_pred             CcHHHHHHHHhcCCc-ceEEEecC
Q 019414          318 SEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      +|+++|++.+.+++. +|+|+.+.
T Consensus       328 ~~~~~A~~~~~~~~~~gk~v~~~~  351 (357)
T PLN02514        328 DYVNTAFERLEKNDVRYRFVVDVA  351 (357)
T ss_pred             HHHHHHHHHHHcCCCceeEEEEcc
Confidence            999999999998886 59999875

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.1e-42  Score=288.88  Aligned_cols=284  Identities=23%  Similarity=0.259  Sum_probs=239.1

Q ss_pred             CccccccCCcCcceeeecc-CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      .||++|+|+|+.|.+++.. ..+++.|++||.|.+|+|+.+|++|+++++||||+....                     
T Consensus        39 ~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~---------------------   97 (336)
T KOG1197|consen   39 TIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNP---------------------   97 (336)
T ss_pred             EEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccccccccEEEEecc---------------------
Confidence            4799999999999776533 336678999999999999999999999999999986621                     


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                                                  .|.|+|++.+|...++++|+.++++.||++.+.+.|||..+.+...++||++
T Consensus        98 ----------------------------~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGht  149 (336)
T KOG1197|consen   98 ----------------------------FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHT  149 (336)
T ss_pred             ----------------------------chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCE
Confidence                                        2799999999999999999999999999999999999999999999999999


Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          160 VAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       160 vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      |||+. +|++|+++.|++++.|+ .+|++.++++|++.+++.|+++.++++..|  +.+++.+++.+ |+|+++|.+|. 
T Consensus       150 VlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~eD--~v~~V~kiTngKGVd~vyDsvG~-  225 (336)
T KOG1197|consen  150 VLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYSTED--YVDEVKKITNGKGVDAVYDSVGK-  225 (336)
T ss_pred             EEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccchh--HHHHHHhccCCCCceeeeccccc-
Confidence            99996 59999999999999999 888998999999999999999999998877  99999999977 99999999987 


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCC-----CHHHHHHHHHCCCCCCCCcee
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT-----DLPSVVDMYMNKQLELEKFIT  312 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~  312 (341)
                      +++...+.+|++. |.+|.+|.............+-.+.+++.......|...+     ...+++.++.++.+.+.  |.
T Consensus       226 dt~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~  302 (336)
T KOG1197|consen  226 DTFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--ID  302 (336)
T ss_pred             hhhHHHHHHhccC-ceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--ee
Confidence            8999999999998 9999999766543222111222345555433333332211     23467778888977666  88


Q ss_pred             eeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          313 HRIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       313 ~~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      ++|||+++.+|++.+++.++ +|+++.+.
T Consensus       303 ~~ypls~vadA~~diesrktvGkvlLlp~  331 (336)
T KOG1197|consen  303 HVYPLSKVADAHADIESRKTVGKVLLLPG  331 (336)
T ss_pred             eecchHHHHHHHHHHHhhhccceEEEeCC
Confidence            99999999999999999887 59888765

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=3.6e-41  Score=312.89  Aligned_cols=332  Identities=35%  Similarity=0.609  Sum_probs=262.7

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||+.++++|+.|+..........+|.++|||++|+|+++|+++.++++||+|++.+. .|+.|.+|+.++.++|.+...
T Consensus        31 ~Vkv~a~gi~~~d~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~  109 (365)
T cd08278          31 LVRIVATGICHTDLVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFP  109 (365)
T ss_pred             EEEEEEeecCcccHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCccc
Confidence            5899999999999666433333457889999999999999999999999999999764 899999999999999987543


Q ss_pred             cCcccccccCCCcccccCCCccc--cccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVN--HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~--~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .+..+ ...+|++.++.++..+.  +....|+|++|+.++++.++++|+++++++++.+++++.||++++.+...+++++
T Consensus       110 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~  188 (365)
T cd08278         110 LNFSG-RRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGS  188 (365)
T ss_pred             ccccc-cccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCC
Confidence            22111 11223333332221111  1223589999999999999999999999999999999999999988888999999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|||+|+|++|++++|+|+.+|+..+++++++++|.+.++++|++.++++.+.+  +.+.+++.+++++|+++||+|++.
T Consensus       189 ~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~d~vld~~g~~~  266 (365)
T cd08278         189 SIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEED--LVAAIREITGGGVDYALDTTGVPA  266 (365)
T ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcC--HHHHHHHHhCCCCcEEEECCCCcH
Confidence            999998899999999999999997799999999999999999999998877655  777788777449999999999878


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCccccccccee-eecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      .+..++++++++ |+++.+|..............+ .+++++.++........+.+++++++++++++.+.+++ ..|++
T Consensus       267 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l  344 (365)
T cd08278         267 VIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPF  344 (365)
T ss_pred             HHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecH
Confidence            899999999998 9999998653211122222223 57788777654333233567889999999988543333 68999


Q ss_pred             CcHHHHHHHHhcCCcceEEEe
Q 019414          318 SEINKAFEYMVKGEGLRCIIS  338 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~~k~vl~  338 (341)
                      +++++|++.+.+++..|+||+
T Consensus       345 ~~~~~a~~~~~~~~~~k~~~~  365 (365)
T cd08278         345 EDINQAIADSESGKVIKPVLR  365 (365)
T ss_pred             HHHHHHHHHHHCCCceEEEEC
Confidence            999999999998887899874

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=3e-41  Score=310.46  Aligned_cols=294  Identities=18%  Similarity=0.203  Sum_probs=224.3

Q ss_pred             CccccccCCcCcceeeeccCCC-----CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-----PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC   75 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-----~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c   75 (341)
                      |||++++|+|++|+........     ..+|.++|||++|+|+++|.+  .|++||||++.+..+|+ |.+|  +..|+|
T Consensus        29 lVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c  103 (341)
T cd08237          29 IVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYL  103 (341)
T ss_pred             EEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccC
Confidence            6899999999999765433221     357999999999999998764  79999999999888887 4456  456788


Q ss_pred             ccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhh--hcC
Q 019414           76 DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAK  153 (341)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~--~~~  153 (341)
                      .+..+.            +..          .+|+|+||+++|++.++++|+++++++|| +..+++++|+++..  ...
T Consensus       104 ~~~~~~------------g~~----------~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~~~~~  160 (341)
T cd08237         104 PSSRFR------------SSG----------YDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRFEQIA  160 (341)
T ss_pred             CCccee------------Eec----------CCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHHhhcC
Confidence            764331            111          13699999999999999999999998766 55688999998754  345


Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEE
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV  231 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vl  231 (341)
                      +++|++|||+|+|++|++++|+|+. .|..+|++++++++|++++++++++..++.      +       ..+ ++|+||
T Consensus       161 ~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~~------~-------~~~~g~d~vi  227 (341)
T cd08237         161 HKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLIDD------I-------PEDLAVDHAF  227 (341)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehhh------h-------hhccCCcEEE
Confidence            7899999999999999999999996 665589999999999999988766533210      1       122 699999


Q ss_pred             eccC---ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCC---CC
Q 019414          232 ECTG---NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK---QL  305 (341)
Q Consensus       232 d~~g---~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~i  305 (341)
                      |++|   .+..+++++++++++ |+++.+|.......++. ...+.+++++.|+.....   ++++++++++.++   +.
T Consensus       228 D~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~k~~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~  302 (341)
T cd08237         228 ECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYPVPINT-RMVLEKGLTLVGSSRSTR---EDFERAVELLSRNPEVAE  302 (341)
T ss_pred             ECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCCcccCH-HHHhhCceEEEEecccCH---HHHHHHHHHHHhCCcccC
Confidence            9999   456889999999998 99999997543322332 223568889988764332   5689999999998   34


Q ss_pred             CCCCceeeeecCCcH---HHHHHHHhcCCcceEEEecC
Q 019414          306 ELEKFITHRIPFSEI---NKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       306 ~~~~~~~~~~~~~~i---~ea~~~~~~~~~~k~vl~~~  340 (341)
                      .+.++++++|+++++   +++++.+.++..+|+|++++
T Consensus       303 ~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~  340 (341)
T cd08237         303 YLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE  340 (341)
T ss_pred             ChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence            677888999998655   55555454444569999875

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=7e-40  Score=304.20  Aligned_cols=332  Identities=40%  Similarity=0.700  Sum_probs=260.7

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||++++++|+.|...........+|+++|+|++|+|+++|++++.+++||+|++.+..+|++|++|++++.++|+....
T Consensus        29 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (363)
T cd08279          29 LVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAG  108 (363)
T ss_pred             EEEEEEeecCcHHHHHhcCCCCCCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCccccc
Confidence            47899999999986654333334568899999999999999999999999999999999999999999999999986421


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      .- .++ ..++..++...|.........|+|++|+.++.+.++++|+++++++++.+++++.+||.++.+..++.++++|
T Consensus       109 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~v  186 (363)
T cd08279         109 IL-GGQ-LPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTV  186 (363)
T ss_pred             cc-ccc-cCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEE
Confidence            00 000 0000001111121111122358999999999999999999999999999999999999998888899999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDN  239 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~  239 (341)
                      ||+|+|++|++++++|+..|+.+|+++++++++.+.++++|++.+++.+..+  +...++..+++ ++|++||++++...
T Consensus       187 LI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~l~~~~~~~~vd~vld~~~~~~~  264 (363)
T cd08279         187 AVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDD--AVEAVRDLTDGRGADYAFEAVGRAAT  264 (363)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCcc--HHHHHHHHcCCCCCCEEEEcCCChHH
Confidence            9998899999999999999995589998999999999999998888877655  77778877755 89999999997678


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCcccccccce-eeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      ++.++++++++ |+++.++.............. ..++..+.++.+......+.+++++++++++++.+.+++++.|+++
T Consensus       265 ~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~  343 (363)
T cd08279         265 IRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLD  343 (363)
T ss_pred             HHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHH
Confidence            89999999998 999999865421111222211 2356666666554333345788999999999887765577899999


Q ss_pred             cHHHHHHHHhcCCcceEEE
Q 019414          319 EINKAFEYMVKGEGLRCII  337 (341)
Q Consensus       319 ~i~ea~~~~~~~~~~k~vl  337 (341)
                      ++++|++.+.+++..|.|+
T Consensus       344 ~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         344 EINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHHhcCCceeEEe
Confidence            9999999999888777765

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=5.6e-40  Score=303.57  Aligned_cols=314  Identities=26%  Similarity=0.360  Sum_probs=252.5

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++++|+.|+....... ...+|.++|||++|+|+++|++++++++||+|++.+..+|+.|..|..+.++.|.+..
T Consensus        28 lIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~  107 (351)
T cd08285          28 IVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGML  107 (351)
T ss_pred             EEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCC
Confidence            589999999999965432222 2356899999999999999999999999999999888899999999999999998742


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      .    ++..               .....|+|+||+.++.+  .++++|+++++++++.++..+.|||++ .....+++|
T Consensus       108 ~----~~~~---------------~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g  167 (351)
T cd08285         108 G----GWKF---------------SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLG  167 (351)
T ss_pred             C----Cccc---------------cCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-HHccCCCCC
Confidence            1    1000               01124799999999974  899999999999999999999999998 467889999


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      ++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++.+.+  +.+.+...+.+ ++|++||++|+
T Consensus       168 ~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d~vld~~g~  245 (351)
T cd08285         168 DTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGD--VVEQILKLTGGKGVDAVIIAGGG  245 (351)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCC--HHHHHHHHhCCCCCcEEEECCCC
Confidence            9999998899999999999999997799999999999999999999999887655  77778777766 89999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCccccccc--c-eeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCc-ee
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP--I-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF-IT  312 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~  312 (341)
                      +..+..++++++++ |+++.+|............  . ...+...+.+.....  ..+.++++++++.++++.+..+ ++
T Consensus       246 ~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~~~~  322 (351)
T cd08285         246 QDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG--GRLRMERLASLIEYGRVDPSKLLTH  322 (351)
T ss_pred             HHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecCC--ccccHHHHHHHHHcCCCChhhceec
Confidence            77889999999998 9999998765322222211  1 112344555433211  1257999999999999887443 44


Q ss_pred             eeecCCcHHHHHHHHhcCCc--ceEEEec
Q 019414          313 HRIPFSEINKAFEYMVKGEG--LRCIISM  339 (341)
Q Consensus       313 ~~~~~~~i~ea~~~~~~~~~--~k~vl~~  339 (341)
                      +.++++++++|++.+.+++.  +|+++.+
T Consensus       323 ~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         323 HFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             cccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            56999999999999988863  6999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-39  Score=298.86  Aligned_cols=308  Identities=20%  Similarity=0.298  Sum_probs=247.5

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||+.++++|+.|........ ..++|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+++++++|....
T Consensus        28 lV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (339)
T PRK10083         28 RVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLV  107 (339)
T ss_pred             EEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCc
Confidence            588999999999965532222 2356899999999999999999999999999999999999999999999999997654


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      +..                      ....|+|+||+.++.+.++++|++++++.++ +..++.++++ +....++++|++
T Consensus       108 ~~~----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~  163 (339)
T PRK10083        108 VLG----------------------VHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDV  163 (339)
T ss_pred             eEE----------------------EccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCE
Confidence            310                      1113699999999999999999999988865 5677888885 467789999999


Q ss_pred             EEEECCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          160 VAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      |+|+|+|++|++++|+|+. +|+..+++++++++|.++++++|++.++++.+.+  +.+.+... +.++|++||++|++.
T Consensus       164 vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~--~~~~~~~~-g~~~d~vid~~g~~~  240 (339)
T PRK10083        164 ALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEP--LGEALEEK-GIKPTLIIDAACHPS  240 (339)
T ss_pred             EEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHhcC-CCCCCEEEECCCCHH
Confidence            9999999999999999996 6997799999999999999999999999876644  55555331 115679999999777


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      .+..++++++++ |+++.+|.......+.. .....+++++.+...    ..+.+++++++++++++.+..++++.|+++
T Consensus       241 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~  314 (339)
T PRK10083        241 ILEEAVTLASPA-ARIVLMGFSSEPSEIVQ-QGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQ  314 (339)
T ss_pred             HHHHHHHHhhcC-CEEEEEccCCCCceecH-HHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHH
Confidence            899999999998 99999987543221111 111246666666542    125789999999999887765577999999


Q ss_pred             cHHHHHHHHhcCC-c-ceEEEecCC
Q 019414          319 EINKAFEYMVKGE-G-LRCIISMED  341 (341)
Q Consensus       319 ~i~ea~~~~~~~~-~-~k~vl~~~~  341 (341)
                      ++++|++.+.+++ . .|+++++.+
T Consensus       315 ~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        315 HVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             HHHHHHHHHhcCCCceEEEEEecCC
Confidence            9999999998654 3 699998864

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=2.7e-39  Score=298.43  Aligned_cols=313  Identities=31%  Similarity=0.421  Sum_probs=255.4

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||+.++++|+.|+........ .++|.++|+|++|+|+++|++++++++||+|++.+..+||.|.+|+++.+.+|+...
T Consensus        29 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (347)
T cd05278          29 IVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGL  108 (347)
T ss_pred             EEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCC
Confidence            5789999999999655433222 456899999999999999999999999999999999999999999999999998855


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      ...+.+                   ....|+|++|++++++  +++++|++++.++++++++++.|||+++ ...+++++
T Consensus       109 ~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~  168 (347)
T cd05278         109 WGWKLG-------------------NRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPG  168 (347)
T ss_pred             cccccc-------------------cCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCC
Confidence            422111                   1234799999999987  9999999999999999999999999996 67889999


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      ++|||.|+|.+|++++|+|+.+|...++++++++++.+.++++|++.++++.+.+  +.+.++..+++ ++|++||++++
T Consensus       169 ~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~i~~~~~~~~~d~vld~~g~  246 (347)
T cd05278         169 STVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGD--IVEQILELTGGRGVDCVIEAVGF  246 (347)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcch--HHHHHHHHcCCCCCcEEEEccCC
Confidence            9999988899999999999999965788888889999999999999998887655  77778877775 89999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      ...++.++++++++ |+++.+|..............+.+++++.++....   ...++++++++.++.+.+.+.+...++
T Consensus       247 ~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~  322 (347)
T cd05278         247 EETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKIDPSKLITHRFP  322 (347)
T ss_pred             HHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCChhHcEEEEec
Confidence            67889999999998 99999985543321112122235666666544222   357889999999998876555678899


Q ss_pred             CCcHHHHHHHHhcCCc--ceEEEec
Q 019414          317 FSEINKAFEYMVKGEG--LRCIISM  339 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~--~k~vl~~  339 (341)
                      +++++++++.+.+++.  .|+|+++
T Consensus       323 ~~~~~~a~~~~~~~~~~~~~~vv~~  347 (347)
T cd05278         323 LDDILKAYRLFDNKPDGCIKVVIRP  347 (347)
T ss_pred             HHHHHHHHHHHhcCCCCceEEEecC
Confidence            9999999999987775  4888763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=4e-39  Score=301.25  Aligned_cols=329  Identities=28%  Similarity=0.380  Sum_probs=256.0

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||+.++++|+.|........ ..++|.++|||++|+|+++|++++++++||+|++.+..+||.|++|+.+.+++|++..
T Consensus        29 ~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~  108 (386)
T cd08283          29 IVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTN  108 (386)
T ss_pred             EEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcc
Confidence            578999999999965532221 2246889999999999999999999999999999998999999999999999999765


Q ss_pred             ccC-cccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           80 INP-VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        80 ~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ... ..+   .+++......|.........|+|++|++++.+  .++++|+++++++|+++++.+.|||+++ ...++.+
T Consensus       109 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~  184 (386)
T cd08283         109 PSAEMAK---LYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKP  184 (386)
T ss_pred             ccccccc---ccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCC
Confidence            431 111   11111111111000000124799999999988  8999999999999999999999999997 7889999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      |++|||+|+|.+|++++++|+..|+.+|+++++++++.+.+++++...++++.+.+ .+.+.+++.+++ ++|++||++|
T Consensus       185 g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~-~~~~~l~~~~~~~~~D~vld~vg  263 (386)
T cd08283         185 GDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVD-DVVEALRELTGGRGPDVCIDAVG  263 (386)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcch-HHHHHHHHHcCCCCCCEEEECCC
Confidence            99999998899999999999999986799999999999999998444667665532 277778888776 8999999997


Q ss_pred             C---------------------hHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCH
Q 019414          236 N---------------------IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDL  293 (341)
Q Consensus       236 ~---------------------~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~  293 (341)
                      +                     ...+..++++++++ |+++.+|..... ...... ..+.+++++.+.....   .+.+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~  338 (386)
T cd08283         264 MEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-VNKFPIGAAMNKGLTLRMGQTHV---QRYL  338 (386)
T ss_pred             CcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-cCccCHHHHHhCCcEEEeccCCc---hHHH
Confidence            5                     24688899999998 999999875432 111221 2356777777754322   2578


Q ss_pred             HHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCC-c-ceEEEec
Q 019414          294 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIISM  339 (341)
Q Consensus       294 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~-~-~k~vl~~  339 (341)
                      +++++++.++++.+.+++++.|+++++++|++.+.+++ . +|+|+++
T Consensus       339 ~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  386 (386)
T cd08283         339 PRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP  386 (386)
T ss_pred             HHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            89999999998887666778999999999999998877 3 5999864

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=3.3e-39  Score=303.91  Aligned_cols=300  Identities=19%  Similarity=0.229  Sum_probs=232.5

Q ss_pred             CccccccCCcCcceeeeccCC-C-------CCCCccccccceEEEEEecCCCC-CCCCCCEEEecccCCCCCChhhcCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-T-------PLFPRIFGHEAAGVVESVGEGVS-DLEVGDHVLPVFTGECGDCRHCRSDV   71 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~-------~~~p~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~c~~c~~c~~~~   71 (341)
                      |||++++|+|++|......+. .       ..+|.++|||++|+|+++|++|+ +|++||||++.+...|+.|++|..  
T Consensus        30 lVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~--  107 (410)
T cd08238          30 LVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPG--  107 (410)
T ss_pred             EEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCC--
Confidence            589999999999965432221 1       14688999999999999999998 699999999999999999988721  


Q ss_pred             CCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecC----ceEECCCCCCchhhhhc-c--ccchhh
Q 019414           72 SNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG----CVAKINPLAPLDKVCIL-S--CGVSTG  144 (341)
Q Consensus        72 ~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~----~~~~lp~~~~~~~aa~l-~--~~~~ta  144 (341)
                        ++                   +          ...|+|+||++++.+    .++++|+++++++|+.+ +  +. .++
T Consensus       108 --~g-------------------~----------~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~-~~~  155 (410)
T cd08238         108 --YS-------------------Y----------TYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCV-IGA  155 (410)
T ss_pred             --cc-------------------c----------cCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHH-HHH
Confidence              00                   0          013799999999987    68999999999987743 2  21 123


Q ss_pred             hhhh--------hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHHc--------CCc-e
Q 019414          145 LGAT--------LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKKF--------GVT-D  204 (341)
Q Consensus       145 ~~~l--------~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g--~~~vv~v~~~~~~~~~~~~~--------g~~-~  204 (341)
                      +.++        .+..++++|++|+|+|+ |++|++++|+|+.+|  +.+|++++++++|++.++++        |++ .
T Consensus       156 ~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~  235 (410)
T cd08238         156 YTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELL  235 (410)
T ss_pred             hhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEE
Confidence            3322        24578899999999975 999999999999975  45799999999999999997        666 4


Q ss_pred             ecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC-CCC--cccccccceeeecceEE
Q 019414          205 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP-SKD--AVFMTKPINVLNERTLK  280 (341)
Q Consensus       205 vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~-~~~--~~~~~~~~~~~~~~~~~  280 (341)
                      ++++.+. .++.+.+++++++ ++|++||++|.+..++.++++++++ |+++.++.. ...  ..++. ...+.+++++.
T Consensus       236 ~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~-~~~~~~~~~i~  312 (410)
T cd08238         236 YVNPATI-DDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNF-YNVHYNNTHYV  312 (410)
T ss_pred             EECCCcc-ccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccH-HHhhhcCcEEE
Confidence            6776542 1277788888877 8999999999888999999999997 877666432 211  12222 12356888998


Q ss_pred             EeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCcceEEEecC
Q 019414          281 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       281 g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                      |+.....   .++++++++++++++.+.++++++|+|+++++|++.+..+..+|+|+.+.
T Consensus       313 g~~~~~~---~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~gKvvl~~~  369 (410)
T cd08238         313 GTSGGNT---DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGGKKLIYTQ  369 (410)
T ss_pred             EeCCCCH---HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCceEEEECC
Confidence            8764332   57899999999999999889999999999999999998443569998864

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=8.7e-39  Score=293.52  Aligned_cols=302  Identities=22%  Similarity=0.401  Sum_probs=247.7

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecc-cCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF-TGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||+.++++|+.|........ ...+|.++|||++|+|+++|++++++++||+|++.+ ...|+.|++|+.|++|.|...
T Consensus        29 ~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~  108 (333)
T cd08296          29 LIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENG  108 (333)
T ss_pred             EEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCC
Confidence            478999999999865542222 235688999999999999999999999999999854 457999999999999999986


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .+.            ++          ...|+|++|+.++.+.++++|+++++++++.+++++.+||+++.. .++.+++
T Consensus       109 ~~~------------~~----------~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~~~  165 (333)
T cd08296         109 KVT------------GV----------TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN-SGAKPGD  165 (333)
T ss_pred             Ccc------------Cc----------ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCC
Confidence            432            11          113699999999999999999999999999999999999998754 4899999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|||+|+|.+|++++++|+.+|+ +|+++++++++++.++++|++.++++.+.+  +.+.++..  +++|+++|++|.+.
T Consensus       166 ~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~--~~~d~vi~~~g~~~  240 (333)
T cd08296         166 LVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSKED--VAEALQEL--GGAKLILATAPNAK  240 (333)
T ss_pred             EEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCCcc--HHHHHHhc--CCCCEEEECCCchH
Confidence            99999999999999999999999 789999999999999999999998887655  66666655  36999999998778


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      .++.++++++++ |+++.+|.......++. ...+.+++++.++.....   .+++.+++++.++++..  ++ +.|+++
T Consensus       241 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l~~--~v-~~~~~~  312 (333)
T cd08296         241 AISALVGGLAPR-GKLLILGAAGEPVAVSP-LQLIMGRKSIHGWPSGTA---LDSEDTLKFSALHGVRP--MV-ETFPLE  312 (333)
T ss_pred             HHHHHHHHcccC-CEEEEEecCCCCCCcCH-HHHhhcccEEEEeCcCCH---HHHHHHHHHHHhCCCCc--eE-EEEEHH
Confidence            999999999998 99999997653322221 122468888888764332   46888889988886643  34 689999


Q ss_pred             cHHHHHHHHhcCCc-ceEEEe
Q 019414          319 EINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       319 ~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      ++.+|++.+.+++. +|+|++
T Consensus       313 ~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         313 KANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHHCCCCceeEEeC
Confidence            99999999998886 588774

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-38  Score=293.51  Aligned_cols=308  Identities=24%  Similarity=0.376  Sum_probs=250.0

Q ss_pred             CccccccCCcCcceeeeccCC--------C--CCCCccccccceEEEEEecCCCC--CCCCCCEEEecccCCCCCChhhc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--------T--PLFPRIFGHEAAGVVESVGEGVS--DLEVGDHVLPVFTGECGDCRHCR   68 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--------~--~~~p~i~G~e~~G~V~~vG~~v~--~~~~Gd~V~~~~~~~c~~c~~c~   68 (341)
                      +||+.++++|+.|........        +  .++|.++|||++|+|+++|++++  +|++||+|++.+..+|+.|.+|+
T Consensus        28 ~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~  107 (350)
T cd08256          28 LVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCN  107 (350)
T ss_pred             EEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHh
Confidence            578999999999966543221        0  14678999999999999999999  99999999999999999999999


Q ss_pred             CCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecC-ceEECCCCCCchhhhhccccchhhhhh
Q 019414           69 SDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGA  147 (341)
Q Consensus        69 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~  147 (341)
                      ++.+++|.....            .++..        ...|+|++|+.++++ .++++|++++++.++.+ .++.++|++
T Consensus       108 ~~~~~~~~~~~~------------~g~~~--------~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a  166 (350)
T cd08256         108 RGQYWMCQKHDL------------YGFQN--------NVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHA  166 (350)
T ss_pred             CcCcccCcCccc------------eeecc--------CCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHH
Confidence            999999974311            11100        023799999999988 57899999999998888 889999999


Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-C
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-G  226 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~  226 (341)
                      + +..++++|++|+|.|+|.+|++++++|+.+|+..++++++++++.+.++++|++.++++.+.+  +.+.+.+.+++ +
T Consensus       167 ~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~  243 (350)
T cd08256         167 V-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVD--VVEKIKELTGGYG  243 (350)
T ss_pred             H-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcC--HHHHHHHHhCCCC
Confidence            6 778999999999977899999999999999987788999999999999999998888876655  77788888776 8


Q ss_pred             ccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          227 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       227 ~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      +|++||++|+...+..++++++++ |+++.+|.......++.......+++++.++....    ..+++++++++++.+.
T Consensus       244 vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~  318 (350)
T cd08256         244 CDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP----YCYPIAIDLIASGRLP  318 (350)
T ss_pred             CCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccEEEEeccCc----hhHHHHHHHHHcCCCC
Confidence            999999998766888999999998 99999986543322222222234667777665432    3688899999999887


Q ss_pred             CCCceeeeecCCcHHHHHHHHhcCCc-ceEEE
Q 019414          307 LEKFITHRIPFSEINKAFEYMVKGEG-LRCII  337 (341)
Q Consensus       307 ~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl  337 (341)
                      +.+++++.|+++++++|++.+++++. .|+|+
T Consensus       319 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         319 TDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             hhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            65556899999999999999988775 47764

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.8e-38  Score=292.60  Aligned_cols=312  Identities=27%  Similarity=0.361  Sum_probs=250.7

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +|+++++++|+.|+..........+|.++|+|++|+|+++|++++++++||+|++.+..+|+.|.+|+++++++|.....
T Consensus        29 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (344)
T cd08284          29 IVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGL  108 (344)
T ss_pred             EEEEEEeeccccchhhhcCCCCCCCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCcc
Confidence            57899999999996554333334457899999999999999999999999999999889999999999999999987533


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      ...              .+    ....+|++++|+.++.+  .++++|+++++++++++++++.|||+++. ..++.+|+
T Consensus       109 ~~~--------------~~----~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~  169 (344)
T cd08284         109 FGY--------------AG----SPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK-RAQVRPGD  169 (344)
T ss_pred             ccc--------------cc----cCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhH-hcCCccCC
Confidence            210              00    01124799999999965  99999999999999999999999999975 47889999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      +|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|+. .++.+..+  +.+.+.+.+++ ++|++||++++.
T Consensus       170 ~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~--~~~~l~~~~~~~~~dvvid~~~~~  246 (344)
T cd08284         170 TVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAE--PVERVREATEGRGADVVLEAVGGA  246 (344)
T ss_pred             EEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcC--HHHHHHHHhCCCCCCEEEECCCCH
Confidence            999998899999999999999975788888899999999999975 45555444  77788887776 899999999987


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      ..+..++++++++ |+++.+|..............+.+++++.+...   ...+.++++++++.++++.+.+++++.+++
T Consensus       247 ~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  322 (344)
T cd08284         247 AALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC---PVRSLFPELLPLLESGRLDLEFLIDHRMPL  322 (344)
T ss_pred             HHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEecC---CcchhHHHHHHHHHcCCCChHHhEeeeecH
Confidence            7899999999997 999999966422111111222456666654321   123679999999999988776556789999


Q ss_pred             CcHHHHHHHHhcCCcceEEEe
Q 019414          318 SEINKAFEYMVKGEGLRCIIS  338 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~~k~vl~  338 (341)
                      ++++++++.+.+++..|+|++
T Consensus       323 ~~~~~a~~~~~~~~~~k~Vi~  343 (344)
T cd08284         323 EEAPEAYRLFDKRKVLKVVLD  343 (344)
T ss_pred             HHHHHHHHHHhcCCceEEEec
Confidence            999999999887766788875

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.8e-38  Score=293.96  Aligned_cols=332  Identities=31%  Similarity=0.477  Sum_probs=261.3

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCC---CCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSD---LEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~---~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      +||+.++++|+.|+.......+..+|.++|||++|+|+.+|+++++   +++||+|++.+..+|+.|.+|..+.+++|++
T Consensus        29 ~v~v~~~~l~~~d~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~  108 (367)
T cd08263          29 LIRVAACGVCHSDLHVLKGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCED  108 (367)
T ss_pred             EEEEEEeeeCcchHHHhcCCCCCCCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcC
Confidence            4789999999999765443333467889999999999999999988   9999999999899999999999999999998


Q ss_pred             ccccCcccccccCCCccc-ccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           78 LRINPVRGVMLADGQSRF-SINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ..++...+-..-+|.+.+ .-.+..++ ....|++++|+.++.+.++++|+++++.+++.++.++.|||+++.+...+.+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~  187 (367)
T cd08263         109 FFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRP  187 (367)
T ss_pred             ccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCC
Confidence            764432221110111111 11111110 0124799999999999999999999999999999999999999888888899


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      +++|||+|+|.+|++++++|+.+|+..+++++.++++.+.++++|++.+++.++.+  +.+.++..+++ ++|++||+++
T Consensus       188 g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~~d~vld~vg  265 (367)
T cd08263         188 GETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKED--AVAAIREITGGRGVDVVVEALG  265 (367)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCccc--HHHHHHHHhCCCCCCEEEEeCC
Confidence            99999998899999999999999995588888999999999999999999887665  77788887765 8999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCccccccccee-eecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      +...++.++++++++ |+++.++..............+ .+++++.++..  ..+.+.++.+++++.++.+.+.+.+++.
T Consensus       266 ~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~~l~~~~~~~~~  342 (367)
T cd08263         266 KPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG--ARPRQDLPELVGLAASGKLDPEALVTHK  342 (367)
T ss_pred             CHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC--CCcHHHHHHHHHHHHcCCCCcccceeEE
Confidence            854889999999998 9999998654321112211222 46777766432  2223468889999999988776667789


Q ss_pred             ecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414          315 IPFSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      ++++++.++++.+.+++. +|+|+.
T Consensus       343 ~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         343 YKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             ecHHHHHHHHHHHhcCCccceeeeC
Confidence            999999999999988875 488863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.6e-38  Score=291.79  Aligned_cols=310  Identities=30%  Similarity=0.406  Sum_probs=254.8

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||++++++|+.|+....... ...+|.++|||++|+|+++|++++++++||+|++.+...|++|++|..+.++.|....
T Consensus        29 ~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (345)
T cd08286          29 IVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGG  108 (345)
T ss_pred             EEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcc
Confidence            478999999999965533222 2245789999999999999999999999999999999999999999999999998752


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      ..           .+          ....|+|++|+.++.+  .++++|++++..+++.+++.+.+||+++....++.+|
T Consensus       109 ~~-----------~~----------~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g  167 (345)
T cd08286         109 WI-----------LG----------NLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPG  167 (345)
T ss_pred             cc-----------cc----------cccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCC
Confidence            21           00          1123799999999987  8999999999999999999999999987778889999


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      ++|||.|+|++|++++|+|+.+|..+|+++++++++.+.++++|++.++++.+.+  +.+.+...+++ ++|++|||+|.
T Consensus       168 ~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~i~~~~~~~~~d~vld~~g~  245 (345)
T cd08286         168 DTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGD--AIEQVLELTDGRGVDVVIEAVGI  245 (345)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccccc--HHHHHHHHhCCCCCCEEEECCCC
Confidence            9999998899999999999999944888898999999999999999999887655  77777777776 89999999988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      ...++.+++.++++ |+++.+|.......+++. ..+.+++++.+....    ...++.++++++++.+.+.+++++.++
T Consensus       246 ~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~  319 (345)
T cd08286         246 PATFELCQELVAPG-GHIANVGVHGKPVDLHLE-KLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFK  319 (345)
T ss_pred             HHHHHHHHHhccCC-cEEEEecccCCCCCcCHH-HHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEee
Confidence            77899999999998 999999865433223221 125577877764322    145888999999998877666789999


Q ss_pred             CCcHHHHHHHHhcCC---cceEEEec
Q 019414          317 FSEINKAFEYMVKGE---GLRCIISM  339 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~---~~k~vl~~  339 (341)
                      +++++++++.+....   ..|++|++
T Consensus       320 l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         320 LSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             HHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            999999999998763   45999865

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=3.3e-38  Score=290.43  Aligned_cols=304  Identities=26%  Similarity=0.373  Sum_probs=252.5

Q ss_pred             CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||+.++++|+.|+.......    ...+|.++|+|++|+|+++|+++.++++||+|++.+..+|+.|..|+.+..++|.
T Consensus        29 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~  108 (340)
T cd05284          29 LVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCE  108 (340)
T ss_pred             EEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCC
Confidence            478999999999866532221    2346889999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhh-cCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV-AKPE  155 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~  155 (341)
                      +..+.+                      ....|+|++|+.+++++++++|+++++++++++++.+.|||+++.+. ..+.
T Consensus       109 ~~~~~~----------------------~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~  166 (340)
T cd05284         109 NARFPG----------------------IGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLD  166 (340)
T ss_pred             CCcccC----------------------ccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCC
Confidence            876631                      11247999999999999999999999999999999999999998766 4688


Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  233 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~  233 (341)
                      ++++|||+|+|.+|++++++|+.+| . +|+++++++++.+.++++|+++++++++.   +.+.+++.+.+ ++|+++|+
T Consensus       167 ~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~i~~~~~~~~~dvvld~  242 (340)
T cd05284         167 PGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASDD---VVEEVRELTGGRGADAVIDF  242 (340)
T ss_pred             CCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCcc---HHHHHHHHhCCCCCCEEEEc
Confidence            9999999999889999999999999 6 88888889999999999999988887653   66778777776 89999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceee
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH  313 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  313 (341)
                      +|+...++.++++++++ |+++.+|.... ..++.. ..+.+++++.++.....   ..++.++++++++.+.+   ..+
T Consensus       243 ~g~~~~~~~~~~~l~~~-g~~i~~g~~~~-~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~g~l~~---~~~  313 (340)
T cd05284         243 VGSDETLALAAKLLAKG-GRYVIVGYGGH-GRLPTS-DLVPTEISVIGSLWGTR---AELVEVVALAESGKVKV---EIT  313 (340)
T ss_pred             CCCHHHHHHHHHHhhcC-CEEEEEcCCCC-CccCHH-HhhhcceEEEEEecccH---HHHHHHHHHHHhCCCCc---ceE
Confidence            99877899999999998 99999986543 222221 12457888877654322   56889999999998764   357


Q ss_pred             eecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          314 RIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       314 ~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      .|+++++++|++.+.+++. .|+|+.+
T Consensus       314 ~~~~~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         314 KFPLEDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             EEeHHHHHHHHHHHHcCCccceEEecC
Confidence            8999999999999988876 4888754

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=5.4e-38  Score=289.19  Aligned_cols=308  Identities=26%  Similarity=0.392  Sum_probs=247.2

Q ss_pred             CccccccCCcCcceeeeccC----CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG----QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~----~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||++++++|+.|.......    ....+|+++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+.+++|+|+
T Consensus        29 lV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~  108 (341)
T PRK05396         29 LIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCR  108 (341)
T ss_pred             EEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCC
Confidence            58899999999996532221    12246789999999999999999999999999999999999999999999999998


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ..++..                      ...+|+|++|+.++.+.++++|+++++++++. ...+.++++++..  ...+
T Consensus       109 ~~~~~~----------------------~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~-~~~~~~~~~~~~~--~~~~  163 (341)
T PRK05396        109 NTKGVG----------------------VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAI-FDPFGNAVHTALS--FDLV  163 (341)
T ss_pred             Ccceee----------------------ecCCCcceeeEEechHHeEECcCCCCHHHhHh-hhHHHHHHHHHHc--CCCC
Confidence            754321                      11247999999999999999999999888774 3566666665443  3468


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      |++|+|.|+|++|++++|+|+.+|+++|+++++++++.+.++++|++.++++++.+  +.+.++..+.+ ++|++|||.|
T Consensus       164 g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~--~~~~~~~~~~~~~~d~v~d~~g  241 (341)
T PRK05396        164 GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSG  241 (341)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcccc--HHHHHHHhcCCCCCCEEEECCC
Confidence            99999998899999999999999986688888899999999999999999887655  77888887765 8999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      +...++.++++++++ |+++.+|.......+.+ .....+++++.++....  ..+.+..+++++.++ +.+.+.+++.+
T Consensus       242 ~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~  316 (341)
T PRK05396        242 APSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGRE--MFETWYKMSALLQSG-LDLSPIITHRF  316 (341)
T ss_pred             CHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccC--ccchHHHHHHHHHcC-CChhHheEEEE
Confidence            878899999999998 99999987544333332 23345677777654221  124566788889888 54555577999


Q ss_pred             cCCcHHHHHHHHhcCCcceEEEecC
Q 019414          316 PFSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                      +++++++|++.+.+++.+|++++|+
T Consensus       317 ~l~~~~~a~~~~~~~~~gk~vv~~~  341 (341)
T PRK05396        317 PIDDFQKGFEAMRSGQSGKVILDWD  341 (341)
T ss_pred             eHHHHHHHHHHHhcCCCceEEEecC
Confidence            9999999999998877669999875

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=5.4e-38  Score=291.70  Aligned_cols=309  Identities=25%  Similarity=0.391  Sum_probs=244.1

Q ss_pred             CccccccCCcCcceeeeccC---C-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG---Q-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~---~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||+.++++|+.|.......   . ...+|.++|||++|+|+++|+++++|++||+|++.+..+|+.|++|+++.+++|.
T Consensus        45 ~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~  124 (364)
T PLN02702         45 RVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCP  124 (364)
T ss_pred             EEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCC
Confidence            57899999999996553221   1 2235789999999999999999999999999999999999999999999999998


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      +..+..                     .....|+|++|++++.+.++++|+++++++++. ..++.++++++ ...++.+
T Consensus       125 ~~~~~~---------------------~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~  181 (364)
T PLN02702        125 EMKFFA---------------------TPPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGP  181 (364)
T ss_pred             CccccC---------------------CCCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCC
Confidence            643210                     001247999999999999999999999988775 23455678775 6788999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHH---hcCCccEEEec
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM---TNGGVDRSVEC  233 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~---~~~~~d~vld~  233 (341)
                      +++|+|+|+|++|++++++|+.+|+..++++++++++.+.++++|++.++++...+.++.+.+..+   +++++|++||+
T Consensus       182 g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~  261 (364)
T PLN02702        182 ETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDC  261 (364)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEEC
Confidence            999999998999999999999999977889989999999999999988776543222366666554   23489999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceee
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH  313 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  313 (341)
                      +|++..+..++++++++ |+++.+|.......+.. .....+++++.++....    ..++.++++++++++.+.+.+++
T Consensus       262 ~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~  335 (364)
T PLN02702        262 VGFNKTMSTALEATRAG-GKVCLVGMGHNEMTVPL-TPAAAREVDVVGVFRYR----NTWPLCLEFLRSGKIDVKPLITH  335 (364)
T ss_pred             CCCHHHHHHHHHHHhcC-CEEEEEccCCCCCcccH-HHHHhCccEEEEeccCh----HHHHHHHHHHHcCCCCchHheEE
Confidence            99778899999999998 99999986533211111 12345777887765322    46888999999998876556678


Q ss_pred             eecC--CcHHHHHHHHhcCCc-ceEEEe
Q 019414          314 RIPF--SEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       314 ~~~~--~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      .|++  +++++|++.+.+++. .|+|+.
T Consensus       336 ~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        336 RFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             EeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            8666  799999999987765 598885

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1e-38  Score=289.62  Aligned_cols=274  Identities=18%  Similarity=0.198  Sum_probs=210.8

Q ss_pred             CccccccCCcC-cceeeeccCC--C--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCC
Q 019414            1 MLSQKHNSFNP-RNFVFGFQGQ--T--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC   75 (341)
Q Consensus         1 ~~~~~~~~~n~-~~~~~~~~~~--~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c   75 (341)
                      |||++++|+|+ +|+.+.....  .  ..+|.++|||++|+|+++|+++ +|++||||++.    |..|.+|..+     
T Consensus        29 lVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~~-----   98 (308)
T TIGR01202        29 VVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVRG-----   98 (308)
T ss_pred             EEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEEe----Cccccccccc-----
Confidence            68999999985 6754322211  1  2579999999999999999998 69999999974    2334332211     


Q ss_pred             ccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCC
Q 019414           76 DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE  155 (341)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  155 (341)
                                                     ..|+|+||++++++.++++|++++++. +.+ ..+.|||+++.+ . ..
T Consensus        99 -------------------------------~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~  143 (308)
T TIGR01202        99 -------------------------------LFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EV  143 (308)
T ss_pred             -------------------------------cCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-cc
Confidence                                           127999999999999999999999764 444 457899998744 3 34


Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      ++++++|+|+|++|++++|+||.+|++.|++++.++++++.++++   .++|+.+.           .+.++|++|||+|
T Consensus       144 ~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~-----------~~~g~Dvvid~~G  209 (308)
T TIGR01202       144 KVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD-----------PRRDYRAIYDASG  209 (308)
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc-----------cCCCCCEEEECCC
Confidence            689999999999999999999999997788888888877766543   34444221           1237999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      ++..+++++++++++ |+++++|.......+++. ..+.+++++.++..+..   +++++++++++++++.+.++++++|
T Consensus       210 ~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~g~i~~~~~it~~~  284 (308)
T TIGR01202       210 DPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFV-PAFMKEARLRIAAEWQP---GDLHAVRELIESGALSLDGLITHQR  284 (308)
T ss_pred             CHHHHHHHHHhhhcC-cEEEEEeecCCCcccccc-hhhhcceEEEEecccch---hHHHHHHHHHHcCCCChhhccceee
Confidence            977899999999998 999999976543333332 23467788887654332   5799999999999999888899999


Q ss_pred             cCCcHHHHHHHHhcCC-cceEEEe
Q 019414          316 PFSEINKAFEYMVKGE-GLRCIIS  338 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~-~~k~vl~  338 (341)
                      +|+|+++|++.+.+++ .+|++|+
T Consensus       285 ~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       285 PASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             cHHHHHHHHHHHhcCcCceEEEeC
Confidence            9999999999876654 4698874

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=4.6e-38  Score=289.92  Aligned_cols=308  Identities=29%  Similarity=0.477  Sum_probs=247.8

Q ss_pred             CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||++++++|+.|......+.    ...+|.++|+|++|+|+++|++++++++||+|++.+..+|+.|++|+.+.+++|.
T Consensus        26 lV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~  105 (343)
T cd05285          26 LVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCP  105 (343)
T ss_pred             EEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCc
Confidence            578999999999965322111    1235779999999999999999999999999999999999999999999999998


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ...+...                     ....|+|++|++++++.++++|+++++++++.+ .++.+|++++ ..+++++
T Consensus       106 ~~~~~~~---------------------~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~  162 (343)
T cd05285         106 DMRFAAT---------------------PPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRP  162 (343)
T ss_pred             Ccccccc---------------------ccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCC
Confidence            6533110                     002379999999999999999999999998776 5788999985 7889999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh-hHHHHHHHHhcC-CccEEEecc
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR-PIQEVIAEMTNG-GVDRSVECT  234 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~-~~~~~i~~~~~~-~~d~vld~~  234 (341)
                      |++|||+|+|++|++++|+|+.+|++.|+++++++++.+.++++|++.++++++.+. .+.+.+++.+.+ ++|++|||+
T Consensus       163 g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  242 (343)
T cd05285         163 GDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECT  242 (343)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECC
Confidence            999999988999999999999999955899989999999999999999988776541 136677777776 899999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      |+...++..+++++++ |+++.+|........++. ....+++.+.++....    +.+++++++++++.+.+.+.+++.
T Consensus       243 g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~~  316 (343)
T cd05285         243 GAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRYA----NTYPTAIELLASGKVDVKPLITHR  316 (343)
T ss_pred             CCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccCh----HHHHHHHHHHHcCCCCchHhEEEE
Confidence            9866889999999998 999999865432222211 1234566666554222    568889999999987655556789


Q ss_pred             ecCCcHHHHHHHHhcCC-c-ceEEE
Q 019414          315 IPFSEINKAFEYMVKGE-G-LRCII  337 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~-~-~k~vl  337 (341)
                      |+++++++|++.+.+++ . +|++|
T Consensus       317 ~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         317 FPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            99999999999998875 3 69987

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.8e-38  Score=293.86  Aligned_cols=310  Identities=27%  Similarity=0.384  Sum_probs=247.1

Q ss_pred             CccccccCCcCcceeeecc---C-----CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQ---G-----QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVS   72 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~---~-----~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~   72 (341)
                      +||++++++|+.|......   +     ...++|.++|||++|+|+++|++++.|++||+|++.+..+|+.|++|+++++
T Consensus        55 ~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~  134 (384)
T cd08265          55 LIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSP  134 (384)
T ss_pred             EEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCc
Confidence            4789999999998554321   1     1235688999999999999999999999999999999999999999999999


Q ss_pred             CCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCC-------Cchhhhhccccchhhh
Q 019414           73 NMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA-------PLDKVCILSCGVSTGL  145 (341)
Q Consensus        73 ~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~-------~~~~aa~l~~~~~ta~  145 (341)
                      ++|......            ++.          ..|+|++|++++++.++++|+++       +.+ +|+++.++++||
T Consensus       135 ~~~~~~~~~------------g~~----------~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~  191 (384)
T cd08265         135 NHCKNLKEL------------GFS----------ADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAY  191 (384)
T ss_pred             ccCCCccee------------eec----------CCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHH
Confidence            999874321            111          13699999999999999999864       344 667778899999


Q ss_pred             hhhhhh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC-ChhHHHHHHHHh
Q 019414          146 GATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH-DRPIQEVIAEMT  223 (341)
Q Consensus       146 ~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~i~~~~  223 (341)
                      +++... .++++|++|||+|+|++|++++++|+..|+..|+++++++++.+.++++|++.++++++. +..+.+.+++.+
T Consensus       192 ~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~  271 (384)
T cd08265         192 NGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVT  271 (384)
T ss_pred             HHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhc
Confidence            998666 689999999999889999999999999998779999899999999999999988887643 123777888888


Q ss_pred             cC-CccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHH
Q 019414          224 NG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM  301 (341)
Q Consensus       224 ~~-~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  301 (341)
                      ++ ++|+++|+.|++ ..+++++++++++ |+++.+|.......+.. .....++.++.++....  ....+++++++++
T Consensus       272 ~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~  347 (384)
T cd08265         272 KGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATTVPLHL-EVLQVRRAQIVGAQGHS--GHGIFPSVIKLMA  347 (384)
T ss_pred             CCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCCCcccH-HHHhhCceEEEEeeccC--CcchHHHHHHHHH
Confidence            77 899999999863 4778999999997 99999986543222211 12233455666654221  1246899999999


Q ss_pred             CCCCCCCCceeeeecCCcHHHHHHHHhcCCcceEEE
Q 019414          302 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII  337 (341)
Q Consensus       302 ~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl  337 (341)
                      ++.+.+..++++.|+++++++|++.+.++...|+|+
T Consensus       348 ~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv  383 (384)
T cd08265         348 SGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI  383 (384)
T ss_pred             cCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence            998876655778999999999999987765567775

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=7.6e-38  Score=289.22  Aligned_cols=307  Identities=25%  Similarity=0.357  Sum_probs=252.5

Q ss_pred             CccccccCCcCcceeeeccCC-------------CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhh
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-------------TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC   67 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-------------~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c   67 (341)
                      +|++.++++|+.|+.......             ...+|.++|||++|+|+++|++++++++||+|++.+..+|+.|++|
T Consensus        29 ~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~  108 (350)
T cd08240          29 LVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVC  108 (350)
T ss_pred             EEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHH
Confidence            578999999999865432211             2235788999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhh
Q 019414           68 RSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  147 (341)
Q Consensus        68 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  147 (341)
                      .++++++|....+..                      ....|++++|+.++.+.++++|+++++.+++.+++.+.|||++
T Consensus       109 ~~~~~~~~~~~~~~~----------------------~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~  166 (350)
T cd08240         109 LAGDENLCAKGRALG----------------------IFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSA  166 (350)
T ss_pred             HCcCcccCCCCCcee----------------------eeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHH
Confidence            999999997753310                      0123799999999999999999999999999999999999999


Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      +.....+.++++|+|+|+|.+|++++|+|+..|++.|+++++++++.+.++++|++.+++.++.+  +.+.+.+..++++
T Consensus       167 ~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~  244 (350)
T cd08240         167 VKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPD--AAKRIIKAAGGGV  244 (350)
T ss_pred             HHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCcc--HHHHHHHHhCCCC
Confidence            87766677899999998899999999999999997888898999999999999998888776554  6667776665589


Q ss_pred             cEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCC
Q 019414          228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLEL  307 (341)
Q Consensus       228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~  307 (341)
                      |++||++|....+..++++++++ |+++.+|........+.... ..+++++.+......   +++++++++++++.+.+
T Consensus       245 d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~---~~~~~~~~ll~~~~i~~  319 (350)
T cd08240         245 DAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTIQGSYVGSL---EELRELVALAKAGKLKP  319 (350)
T ss_pred             cEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEEEEcccCCH---HHHHHHHHHHHcCCCcc
Confidence            99999998778899999999998 99999986544322332222 337777777665443   56888999999997764


Q ss_pred             CCceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414          308 EKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       308 ~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      .  ....+++++++++++.+.+++. .|++++
T Consensus       320 ~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         320 I--PLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             c--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            3  4678999999999999988775 488875

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.8e-37  Score=286.09  Aligned_cols=309  Identities=26%  Similarity=0.368  Sum_probs=253.4

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||+.++++|+.|+....... ...+|.++|+|++|+|+.+|++++.+++||+|++.+..+|++|++|+.|..|+|....
T Consensus        29 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (345)
T cd08260          29 VVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV  108 (345)
T ss_pred             EEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCc
Confidence            478899999999865533222 2346889999999999999999999999999998777899999999999999999853


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      ..                      +....|+|++|++++..  .++++|++++.++++.++.++.|||+++.+..++.++
T Consensus       109 ~~----------------------~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~  166 (345)
T cd08260         109 QP----------------------GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPG  166 (345)
T ss_pred             cc----------------------ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCC
Confidence            21                      01123799999999975  9999999999999999999999999998778889999


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhcCCccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      ++|+|+|+|++|++++++|+.+|+ .|+++.+++++.+.++++|++.+++.++ .+  +.+.+..+..+++|++||++|+
T Consensus       167 ~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~~d~vi~~~g~  243 (345)
T cd08260         167 EWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASEVED--VAAAVRDLTGGGAHVSVDALGI  243 (345)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccccchh--HHHHHHHHhCCCCCEEEEcCCC
Confidence            999999999999999999999999 8888889999999999999999988876 44  6677777766689999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcc-ccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      ...+..++++++++ |+++.+|....... ..+.. ..+.+++++.+.....   ...++.++++++++++.+.+.+++.
T Consensus       244 ~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~i~~~~~~~~~  319 (345)
T cd08260         244 PETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP---AHRYDAMLALIASGKLDPEPLVGRT  319 (345)
T ss_pred             HHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC---HHHHHHHHHHHHcCCCChhhheeEE
Confidence            67889999999998 99999986543321 11211 1235677777655432   2578899999999988776556789


Q ss_pred             ecCCcHHHHHHHHhcCCcc-eEEEe
Q 019414          315 IPFSEINKAFEYMVKGEGL-RCIIS  338 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~~~-k~vl~  338 (341)
                      ++++++++|++.+.+++.. |+|++
T Consensus       320 ~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         320 ISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             ecHHHHHHHHHHHHcCCCCceEEec
Confidence            9999999999999887754 77754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=1.4e-37  Score=291.73  Aligned_cols=307  Identities=18%  Similarity=0.239  Sum_probs=246.2

Q ss_pred             CccccccCCcCcceeeeccCC---------C--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ---------T--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS   69 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~---------~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~   69 (341)
                      |||+.++++|+.|........         .  ...+.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|.+
T Consensus        46 lI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~  125 (393)
T cd08246          46 LVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAG  125 (393)
T ss_pred             EEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccc
Confidence            578999999988854422210         0  11235899999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh
Q 019414           70 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  149 (341)
Q Consensus        70 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~  149 (341)
                      +..++|....++.            +         ....|+|++|++++...++++|+++++++++.+++++.|||+++.
T Consensus       126 ~~~~~~~~~~~~g------------~---------~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~  184 (393)
T cd08246         126 GDPMFDPSQRIWG------------Y---------ETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLF  184 (393)
T ss_pred             ccccccccccccc------------c---------cCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHh
Confidence            9999998754431            0         012479999999999999999999999999999999999999976


Q ss_pred             hh--cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC--------------
Q 019414          150 NV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--------------  212 (341)
Q Consensus       150 ~~--~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~--------------  212 (341)
                      ..  +++++|++|+|+|+ |++|++++++|+.+|+ .++++++++++.+.++++|++.++++++.+              
T Consensus       185 ~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~  263 (393)
T cd08246         185 GWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYT  263 (393)
T ss_pred             hcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhh
Confidence            54  68899999999997 9999999999999999 677788899999999999999888864421              


Q ss_pred             ------hhHHHHHHHHhcC--CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEee
Q 019414          213 ------RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTF  283 (341)
Q Consensus       213 ------~~~~~~i~~~~~~--~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~  283 (341)
                            ..+.+.+.+++++  ++|++||++|+ ..+..++++++++ |+++.+|..... ..++. ...+.++.++.++.
T Consensus       264 ~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~l~~~~~~i~g~~  340 (393)
T cd08246         264 AWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCDRG-GMVVICAGTTGYNHTYDN-RYLWMRQKRIQGSH  340 (393)
T ss_pred             hhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhccC-CEEEEEcccCCCCCCCcH-HHHhhheeEEEecc
Confidence                  1255677777775  69999999987 7789999999998 999999864332 11222 22245666777765


Q ss_pred             ecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcC-Cc-ceEEE
Q 019414          284 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG-EG-LRCII  337 (341)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~-~~-~k~vl  337 (341)
                      ...+   +.++.++++++++.+.+  .++++|+++++++|++.+.++ +. +|+++
T Consensus       341 ~~~~---~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv  391 (393)
T cd08246         341 FAND---REAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHRNQHHVGNMAV  391 (393)
T ss_pred             cCcH---HHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence            5433   46888999999997763  367899999999999999887 54 47765

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=3e-37  Score=284.63  Aligned_cols=309  Identities=26%  Similarity=0.359  Sum_probs=249.9

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||+.++++|+.|+...........|.++|||++|+|+++|++++.+++||+|++.+..+|+.|.+|..+..++|.+..+
T Consensus        29 ~V~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (345)
T cd08287          29 VIRVVATCVCGSDLWPYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF  108 (345)
T ss_pred             EEEEeeeeecccchhhhcCCCCCCCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCc
Confidence            47899999999995554332223458899999999999999999999999999986677899999999999999997544


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhh-----hhccccchhhhhhhhhhcC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKV-----CILSCGVSTGLGATLNVAK  153 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~a-----a~l~~~~~ta~~~l~~~~~  153 (341)
                      +.                      ....|+|++|+.++.+  .++++|++++++.+     +++...+.+|++++ +..+
T Consensus       109 ~~----------------------~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~  165 (345)
T cd08287         109 WG----------------------AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAG  165 (345)
T ss_pred             cc----------------------CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcC
Confidence            31                      1123799999999974  99999999987221     12336788899986 4678


Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEe
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  232 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld  232 (341)
                      +.+|++|+|.|+|++|++++|+|+..|++.++++++++++.+.++++|++.++++...+  +.+.+.+.+++ ++|+++|
T Consensus       166 ~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~--~~~~i~~~~~~~~~d~il~  243 (345)
T cd08287         166 VRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEE--AVARVRELTGGVGADAVLE  243 (345)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCccc--HHHHHHHhcCCCCCCEEEE
Confidence            99999999998899999999999999997799999899899999999999999887655  77788887776 8999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCcee
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT  312 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  312 (341)
                      ++|++..++.++++++++ |+++.++.......++.. ..+.+++++.+.....   ...++++++++.++.+.+.++++
T Consensus       244 ~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~  318 (345)
T cd08287         244 CVGTQESMEQAIAIARPG-GRVGYVGVPHGGVELDVR-ELFFRNVGLAGGPAPV---RRYLPELLDDVLAGRINPGRVFD  318 (345)
T ss_pred             CCCCHHHHHHHHHhhccC-CEEEEecccCCCCccCHH-HHHhcceEEEEecCCc---HHHHHHHHHHHHcCCCCHHHhEE
Confidence            998878999999999997 999999865532222221 3356788887643222   25788999999999887665567


Q ss_pred             eeecCCcHHHHHHHHhcCCcceEEEec
Q 019414          313 HRIPFSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       313 ~~~~~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      +.++++++++|++.+.+++..|++|++
T Consensus       319 ~~~~l~~~~~a~~~~~~~~~~k~~~~~  345 (345)
T cd08287         319 LTLPLDEVAEGYRAMDERRAIKVLLRP  345 (345)
T ss_pred             eeecHHHHHHHHHHHhCCCceEEEeCC
Confidence            899999999999999887777999864

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=7e-38  Score=288.70  Aligned_cols=282  Identities=20%  Similarity=0.253  Sum_probs=228.5

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccc--cceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGH--EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~--e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++++||.|+....... ...+|.++|+  |++|+|..+|+++++|++||+|+..                     
T Consensus        47 lVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~---------------------  105 (348)
T PLN03154         47 LVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI---------------------  105 (348)
T ss_pred             EEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec---------------------
Confidence            689999999998865432111 1235889998  8899999999999999999999855                     


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCc--eEE--CCCCCCch-hhhhccccchhhhhhhhhhc
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC--VAK--INPLAPLD-KVCILSCGVSTGLGATLNVA  152 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~--~~~--lp~~~~~~-~aa~l~~~~~ta~~~l~~~~  152 (341)
                                                     |+|+||+.++.+.  +++  +|++++++ +||++++++.|||+++.+..
T Consensus       106 -------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~  154 (348)
T PLN03154        106 -------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVC  154 (348)
T ss_pred             -------------------------------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhc
Confidence                                           5899999999754  544  59999986 68899999999999988888


Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCC-ChhHHHHHHHHhcCCccE
Q 019414          153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~-~~~~~~~i~~~~~~~~d~  229 (341)
                      ++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.+.++ ++|++.++++.+. +  +.+.+++.+++++|+
T Consensus       155 ~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~--~~~~i~~~~~~gvD~  231 (348)
T PLN03154        155 SPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPD--LDAALKRYFPEGIDI  231 (348)
T ss_pred             CCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCCccc--HHHHHHHHCCCCcEE
Confidence            9999999999987 9999999999999999 7999989999999987 7999999988643 4  777787777668999


Q ss_pred             EEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcc-c---c-cccceeeecceEEEeeecCCC--CCCCHHHHHHHHHC
Q 019414          230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-F---M-TKPINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMN  302 (341)
Q Consensus       230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~---~-~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~  302 (341)
                      +||++|+ ..++.++++++++ |+++.+|....... .   . .....+.+++++.|+....+.  ..+.++++++++++
T Consensus       232 v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~  309 (348)
T PLN03154        232 YFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQ  309 (348)
T ss_pred             EEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHC
Confidence            9999987 6889999999998 99999997543211 0   0 111235578888887654321  11357789999999


Q ss_pred             CCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          303 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       303 ~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      |++.+.  ++..|+|+++++|++.+.+++. +|+|+++.+
T Consensus       310 G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~  347 (348)
T PLN03154        310 GKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVAK  347 (348)
T ss_pred             CCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence            988653  5678999999999999999886 599998753

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.1e-37  Score=288.76  Aligned_cols=319  Identities=24%  Similarity=0.325  Sum_probs=247.1

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||++++++|+.|+..........+|+++|||++|+|+++|++++.+++||+|++.+..+|+.|++|++++.++|.....
T Consensus        29 lv~v~a~~i~~~D~~~~~g~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~  108 (375)
T cd08282          29 IVRITTTAICGSDLHMYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNP  108 (375)
T ss_pred             EEEEEEEeeCHHHHHHHcCCCCCCCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCc
Confidence            57899999999997664333334568999999999999999999999999999999999999999999999999986211


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCch---hhhhccccchhhhhhhhhhcCCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLD---KVCILSCGVSTGLGATLNVAKPE  155 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~  155 (341)
                      . -     .++  .+..-+    .....|+|+||++++.+  .++++|++++++   +++.+++++.|||+++ ...+++
T Consensus       109 ~-~-----~~~--~~~~~~----~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~  175 (375)
T cd08282         109 G-R-----AGG--AYGYVD----MGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQ  175 (375)
T ss_pred             c-c-----ccc--cccccc----cCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCC
Confidence            0 0     000  000000    01124799999999976  899999999998   5678888999999997 778999


Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|++|+|.|+|++|++++|+|+.+|+.+|+++++++++.+.++++|+. .+++++.+  +.+.+.+.+++++|++|||+|
T Consensus       176 ~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~--~~~~i~~~~~~~~d~v~d~~g  252 (375)
T cd08282         176 PGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSDGD--PVEQILGLEPGGVDRAVDCVG  252 (375)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCccc--HHHHHHHhhCCCCCEEEECCC
Confidence            999999998899999999999999986788899999999999999984 56665544  777777777668999999998


Q ss_pred             ChH-----------HHHHHHHHhcCCCcEEEEEccCCCCcc-----------cccc-cceeeecceEEEeeecCCCCCCC
Q 019414          236 NID-----------NMISAFECVHDGWGVAVLVGVPSKDAV-----------FMTK-PINVLNERTLKGTFFGNYKPRTD  292 (341)
Q Consensus       236 ~~~-----------~~~~~~~~l~~~~g~~v~~g~~~~~~~-----------~~~~-~~~~~~~~~~~g~~~~~~~~~~~  292 (341)
                      ...           .+..++++++++ |+++.+|.......           ..+. ...+.++..+.+....   ....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  328 (375)
T cd08282         253 YEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAP---VKKY  328 (375)
T ss_pred             CcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCC---chhh
Confidence            742           588999999998 99998876432110           0011 1112344444443321   2256


Q ss_pred             HHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCcceEEEec
Q 019414          293 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       293 ~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      ++.++++++++++.+..++++.+++++++++++.+.+++..|+|+++
T Consensus       329 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~  375 (375)
T cd08282         329 NRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP  375 (375)
T ss_pred             HHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence            88899999999887655578999999999999999888755888763

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=1.3e-36  Score=280.10  Aligned_cols=308  Identities=28%  Similarity=0.404  Sum_probs=245.5

Q ss_pred             CccccccCCcCcceeeecc----CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ----GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~----~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||+.++++|+.|......    .....+|.++|||++|+|+.+|++++.+++||+|++.+..+|+.|++|..+.+|+|.
T Consensus        29 ~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~  108 (341)
T cd05281          29 LIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQ  108 (341)
T ss_pred             EEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCc
Confidence            4789999999998654211    112235778999999999999999999999999999999999999999999999998


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ...+..                      ....|+|++|++++.+.++++|++++.+ +++++..+.++++++.  ....+
T Consensus       109 ~~~~~~----------------------~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~~~~--~~~~~  163 (341)
T cd05281         109 NTKILG----------------------VDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVHTVL--AGDVS  163 (341)
T ss_pred             ccceEe----------------------ccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHHHHH--hcCCC
Confidence            653311                      1124799999999999999999999985 4567777888888764  45578


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      |++|||+|+|.+|++++|+|+.+|..+|++++++++|.+.++++|++.+++.++.+  +. .+++.+++ ++|++||++|
T Consensus       164 g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~-~~~~~~~~~~vd~vld~~g  240 (341)
T cd05281         164 GKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREED--VV-EVKSVTDGTGVDVVLEMSG  240 (341)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccccc--HH-HHHHHcCCCCCCEEEECCC
Confidence            99999998899999999999999986688888899999999999998888876555  66 77777776 9999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      +.....+++++++++ |+++.++.......+.+......+++.+.+....  ...+.++.+++++.++.+.+.+.++..+
T Consensus       241 ~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~  317 (341)
T cd05281         241 NPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR--KMFETWYQVSALLKSGKVDLSPVITHKL  317 (341)
T ss_pred             CHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecC--CcchhHHHHHHHHHcCCCChhHheEEEe
Confidence            877889999999998 9999998654322222222234466666655421  1224678899999999887666677889


Q ss_pred             cCCcHHHHHHHHhcCCcceEEEec
Q 019414          316 PFSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      ++++++++++.+.+++..|+|+++
T Consensus       318 ~~~~~~~a~~~~~~~~~gk~vv~~  341 (341)
T cd05281         318 PLEDFEEAFELMRSGKCGKVVLYP  341 (341)
T ss_pred             cHHHHHHHHHHHhcCCCceEEecC
Confidence            999999999999888755988764

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=1.4e-36  Score=279.94  Aligned_cols=308  Identities=28%  Similarity=0.451  Sum_probs=249.4

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +|+++++++|+.|+....... ...+|.++|+|++|+|+++|++++.+++||+|++.+..+|++|++|..+..++|....
T Consensus        28 ~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (343)
T cd08235          28 LVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYK  107 (343)
T ss_pred             EEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcc
Confidence            578999999999965532222 2345789999999999999999999999999999999999999999999999998864


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCc-----eEECCCCCCchhhhhccccchhhhhhhhhhcCC
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-----VAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  154 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~-----~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~  154 (341)
                      +..                      ....|+|++|++++.+.     ++++|+++++.+++.+ .++.+||+++.. .++
T Consensus       108 ~~~----------------------~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~-~~~  163 (343)
T cd08235         108 KFG----------------------NLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQRK-AGI  163 (343)
T ss_pred             eec----------------------cCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHHh-cCC
Confidence            320                      11247999999999999     9999999999998766 788999999754 589


Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~  233 (341)
                      ++|++|||+|+|.+|++++++|+..|++.|+++++++++.+.++++|++.++++++.+  +.+.++..+++ ++|++||+
T Consensus       164 ~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~vd~vld~  241 (343)
T cd08235         164 KPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEED--LVEKVRELTDGRGADVVIVA  241 (343)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccC--HHHHHHHHhCCcCCCEEEEC
Confidence            9999999998899999999999999994488888999999999999998888887665  88888887776 89999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCcee
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT  312 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  312 (341)
                      +++...+..++++++++ |+++.++........... .....+++.+.++.....   +.++.++++++++.+.+.+.+.
T Consensus       242 ~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~l~~~~~l~~~~~~~  317 (343)
T cd08235         242 TGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASP---EDYKEALELIASGKIDVKDLIT  317 (343)
T ss_pred             CCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCCh---hhHHHHHHHHHcCCCChHHhee
Confidence            98767889999999998 999999864332111111 112335666655543322   5688899999999887644567


Q ss_pred             eeecCCcHHHHHHHHhcCCcceEEEe
Q 019414          313 HRIPFSEINKAFEYMVKGEGLRCIIS  338 (341)
Q Consensus       313 ~~~~~~~i~ea~~~~~~~~~~k~vl~  338 (341)
                      ..|++++++++++.+.+++..|+|++
T Consensus       318 ~~~~~~~~~~a~~~~~~~~~~k~vi~  343 (343)
T cd08235         318 HRFPLEDIEEAFELAADGKSLKIVIT  343 (343)
T ss_pred             eEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence            88999999999999988874488763

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.2e-37  Score=280.97  Aligned_cols=298  Identities=19%  Similarity=0.266  Sum_probs=236.1

Q ss_pred             CccccccCCcCcceeeeccC------------CCCCCCccccccceEEEEEecCCCCC-CCCCCEEEecccCCCCCChhh
Q 019414            1 MLSQKHNSFNPRNFVFGFQG------------QTPLFPRIFGHEAAGVVESVGEGVSD-LEVGDHVLPVFTGECGDCRHC   67 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~------------~~~~~p~i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~c~~c~~c   67 (341)
                      +||++++++|+.|+......            ....+|.++|+|++|+|+++|+++++ +++||+|++.+..+|+.|++|
T Consensus        27 ~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~  106 (341)
T cd08262          27 LVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASC  106 (341)
T ss_pred             EEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhh
Confidence            57899999999996543321            12235889999999999999999997 999999999999999999999


Q ss_pred             cCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhh
Q 019414           68 RSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  147 (341)
Q Consensus        68 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  147 (341)
                      ..+..                                ....|+|+||++++.+.++++|+++++++++ ++.++++||++
T Consensus       107 ~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~  153 (341)
T cd08262         107 GIGLS--------------------------------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA  153 (341)
T ss_pred             hCCCC--------------------------------cCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH
Confidence            33210                                0023799999999999999999999998876 67788999998


Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh--hHHHHHHHHhcC
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                       ....++++|++|||+|+|++|++++|+|+.+|+..++++++++++.+.++++|++.++++++.+.  .+. .+.....+
T Consensus       154 -~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~~~~  231 (341)
T cd08262         154 -VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELARAGG  231 (341)
T ss_pred             -HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHHhCC
Confidence             57889999999999988999999999999999977888888999999999999988888765431  122 33444444


Q ss_pred             -CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCC
Q 019414          226 -GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ  304 (341)
Q Consensus       226 -~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  304 (341)
                       ++|++||++|++..+..++++++++ |+++.+|........... ..+.+++++.++.....   +.+++++++++++.
T Consensus       232 ~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~  306 (341)
T cd08262         232 PKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEPA-LAIRKELTLQFSLGYTP---EEFADALDALAEGK  306 (341)
T ss_pred             CCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCHH-HHhhcceEEEEEecccH---HHHHHHHHHHHcCC
Confidence             8999999998855788899999997 999999866433222111 11346666655432221   46889999999999


Q ss_pred             CCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414          305 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       305 i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      +.+.+.+++.+++++++++++.+.+++. .|+|++
T Consensus       307 i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         307 VDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             CChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            9876666799999999999999988875 488864

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=1.1e-36  Score=280.21  Aligned_cols=305  Identities=24%  Similarity=0.380  Sum_probs=243.5

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||++++++|+.|+...........|.++|||++|+|+++|+++++|++||+|++.+. .+|+.|++|..+..++|.+..
T Consensus        29 lv~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (338)
T PRK09422         29 LVKMEYCGVCHTDLHVANGDFGDKTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVK  108 (338)
T ss_pred             EEEEEEEeechhHHHHHcCCCCCCCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCcc
Confidence            5789999999998544322222234789999999999999999999999999997654 479999999999999998764


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      ...                      ....|+++||+.++...++++|+++++.++++++..+.|||+++ ..+.+++|++
T Consensus       109 ~~~----------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~  165 (338)
T PRK09422        109 NAG----------------------YTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQW  165 (338)
T ss_pred             ccC----------------------ccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCE
Confidence            321                      11236999999999999999999999999999999999999996 7788999999


Q ss_pred             EEEECCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          160 VAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~-~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      |||+|+|++|++++++|+. .|+ .|+++++++++++.++++|++.++++.. .+  +.+.+++.++ ++|.++++.++.
T Consensus       166 vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~~v~~~~~-~~d~vi~~~~~~  241 (338)
T PRK09422        166 IAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKRVED--VAKIIQEKTG-GAHAAVVTAVAK  241 (338)
T ss_pred             EEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccccccc--HHHHHHHhcC-CCcEEEEeCCCH
Confidence            9999999999999999998 498 8999999999999999999998888754 33  6667777665 688666555566


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      +.+..++++++++ |+++.+|.......++. .....++..+.++.....   +.++.+++++.++++..  .+ ..+++
T Consensus       242 ~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~g~l~~--~v-~~~~~  313 (338)
T PRK09422        242 AAFNQAVDAVRAG-GRVVAVGLPPESMDLSI-PRLVLDGIEVVGSLVGTR---QDLEEAFQFGAEGKVVP--KV-QLRPL  313 (338)
T ss_pred             HHHHHHHHhccCC-CEEEEEeeCCCCceecH-HHHhhcCcEEEEecCCCH---HHHHHHHHHHHhCCCCc--cE-EEEcH
Confidence            8899999999998 99999986533222221 122345666666543222   46888999999997753  34 46899


Q ss_pred             CcHHHHHHHHhcCCc-ceEEEecC
Q 019414          318 SEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      +++++|++.+.+++. +|+++++.
T Consensus       314 ~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        314 EDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             HHHHHHHHHHHcCCccceEEEecC
Confidence            999999999988776 49988765

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.6e-37  Score=281.98  Aligned_cols=307  Identities=21%  Similarity=0.343  Sum_probs=245.9

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEE-ecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL-PVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~-~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||+.++++|+.|+....... ...+|.++|||++|+|+++|+++++|++||+|+ .....+|++|++|+++..|+|...
T Consensus        28 lirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (337)
T cd05283          28 DIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKG  107 (337)
T ss_pred             EEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcch
Confidence            578999999999866543222 235688999999999999999999999999998 455568999999999999999886


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .+..          .|+...     +....|+|+||+.++.+.++++|+++++++++.+++.+.+||+++.+ ..+++|+
T Consensus       108 ~~~~----------~~~~~~-----~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~  171 (337)
T cd05283         108 VVTY----------NGKYPD-----GTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKR-NGVGPGK  171 (337)
T ss_pred             hhcc----------cccccC-----CCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHh-cCCCCCC
Confidence            5431          000000     11234799999999999999999999999999999999999998644 5689999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +++|.|+|.+|++++++|+..|+ +++.+++++++.+.++++|++.+++....+  +.+.    ..+++|++|||+|...
T Consensus       172 ~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~--~~~~----~~~~~d~v~~~~g~~~  244 (337)
T cd05283         172 RVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDPE--AMKK----AAGSLDLIIDTVSASH  244 (337)
T ss_pred             EEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcchh--hhhh----ccCCceEEEECCCCcc
Confidence            99998889999999999999999 889998999999999999999888776533  2221    2348999999999865


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      .+++++++++++ |+++.+|.......++. ...+.+++++.++.....   +.++.+++++.++++.+  . .+.++++
T Consensus       245 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~l~~--~-~~~~~~~  316 (337)
T cd05283         245 DLDPYLSLLKPG-GTLVLVGAPEEPLPVPP-FPLIFGRKSVAGSLIGGR---KETQEMLDFAAEHGIKP--W-VEVIPMD  316 (337)
T ss_pred             hHHHHHHHhcCC-CEEEEEeccCCCCccCH-HHHhcCceEEEEecccCH---HHHHHHHHHHHhCCCcc--c-eEEEEHH
Confidence            689999999998 99999987543322222 122457888888775543   57889999999998754  3 4789999


Q ss_pred             cHHHHHHHHhcCCc-ceEEEe
Q 019414          319 EINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       319 ~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      ++++|++.+.+++. +|+|++
T Consensus       317 ~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         317 GINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHHHHHHHHcCCCcceEeeC
Confidence            99999999998886 488764

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=1.4e-36  Score=279.11  Aligned_cols=305  Identities=27%  Similarity=0.418  Sum_probs=249.9

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|+++++++|+.|........  ..++|.++|+|++|+|+++|++++.+++||+|++++..+|+.|++|+.++.+.|...
T Consensus        30 ~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~  109 (338)
T cd08254          30 LVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQ  109 (338)
T ss_pred             EEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCC
Confidence            478899999999855432222  234578999999999999999999999999999999999999999999999999654


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      ...   |                   ....|+|++|++++.+.++++|++++.++++.++.++.|||+++.....+++++
T Consensus       110 ~~~---~-------------------~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~  167 (338)
T cd08254         110 GMP---G-------------------LGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGE  167 (338)
T ss_pred             Ccc---c-------------------cccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCC
Confidence            331   0                   112379999999999999999999999999999999999999988888899999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      +|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..+..  +.+.+ ..+.+ ++|+++|++|..
T Consensus       168 ~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~--~~~~~-~~~~~~~~D~vid~~g~~  243 (338)
T cd08254         168 TVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLDDS--PKDKK-AAGLGGGFDVIFDFVGTQ  243 (338)
T ss_pred             EEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCCcC--HHHHH-HHhcCCCceEEEECCCCH
Confidence            99999889999999999999999 799999999999999999998888776554  55555 44444 899999999887


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      ..++.++++++++ |+++.++.......+.. ...+.++.++.++....   ...++.++++++++.+.+.   .+.+++
T Consensus       244 ~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~~---~~~~~~  315 (338)
T cd08254         244 PTFEDAQKAVKPG-GRIVVVGLGRDKLTVDL-SDLIARELRIIGSFGGT---PEDLPEVLDLIAKGKLDPQ---VETRPL  315 (338)
T ss_pred             HHHHHHHHHhhcC-CEEEEECCCCCCCccCH-HHHhhCccEEEEeccCC---HHHHHHHHHHHHcCCCccc---ceeEcH
Confidence            8899999999998 99999986543322222 22245666777654332   2568889999999988754   578999


Q ss_pred             CcHHHHHHHHhcCCc-ceEEEec
Q 019414          318 SEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++++++++.+.+++. .|+|+++
T Consensus       316 ~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         316 DEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             HHHHHHHHHHHcCCccceEEEeC
Confidence            999999999988876 4888764

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.9e-36  Score=278.44  Aligned_cols=306  Identities=32%  Similarity=0.524  Sum_probs=248.1

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||++++++|+.|+....... ...+|.++|+|++|+|+++|++++.+++||+|+..+..+|+.|..|+.+++|+|....
T Consensus        28 ~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (337)
T cd08261          28 LVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQ  107 (337)
T ss_pred             EEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCC
Confidence            478999999999966543322 2245789999999999999999999999999999989999999999999999995321


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      ..                      .....|+|++|+.++++ ++++|+++++++++.+ ..+.++++++ ...++.+|++
T Consensus       108 ~~----------------------~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~  162 (337)
T cd08261         108 VL----------------------GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDT  162 (337)
T ss_pred             ee----------------------eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCE
Confidence            10                      00113799999999999 9999999999998876 5678888876 7788999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID  238 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~  238 (341)
                      |||+|+|.+|++++|+|+.+|+ +|+++.+++++.+.++++|+++++++.+.+  +.+.++..+++ ++|++||++|+..
T Consensus       163 vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~  239 (337)
T cd08261         163 VLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDED--VAARLRELTDGEGADVVIDATGNPA  239 (337)
T ss_pred             EEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcccC--HHHHHHHHhCCCCCCEEEECCCCHH
Confidence            9999889999999999999999 788888899999999999999999888765  78888888776 8999999998877


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      .+..++++++++ |+++.++.......++. ..+..+++++.+...   ...+.+++++++++++.+.+.+.+...++++
T Consensus       240 ~~~~~~~~l~~~-G~~i~~g~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~  314 (337)
T cd08261         240 SMEEAVELVAHG-GRVVLVGLSKGPVTFPD-PEFHKKELTILGSRN---ATREDFPDVIDLLESGKVDPEALITHRFPFE  314 (337)
T ss_pred             HHHHHHHHHhcC-CEEEEEcCCCCCCccCH-HHHHhCCCEEEEecc---CChhhHHHHHHHHHcCCCChhhheEEEeeHH
Confidence            889999999998 99999986543222221 122335666665431   2225788899999999887643467899999


Q ss_pred             cHHHHHHHHhcCC-c-ceEEEec
Q 019414          319 EINKAFEYMVKGE-G-LRCIISM  339 (341)
Q Consensus       319 ~i~ea~~~~~~~~-~-~k~vl~~  339 (341)
                      +++++++.+.+++ . .|+|+++
T Consensus       315 ~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         315 DVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHHHHhcCCCceEEEEEeC
Confidence            9999999998874 4 5998864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=1.3e-36  Score=285.58  Aligned_cols=310  Identities=18%  Similarity=0.248  Sum_probs=245.3

Q ss_pred             CccccccCCcCcceeeeccCC----------CC-CCC-ccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----------TP-LFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR   68 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----------~~-~~p-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~   68 (341)
                      +||+.++++|+.|........          .+ ..| .++|||++|+|+++|++++++++||+|++.+..+|++|++|+
T Consensus        41 lV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~  120 (398)
T TIGR01751        41 LVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGR  120 (398)
T ss_pred             EEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhc
Confidence            578899999987743221110          11 123 389999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhh
Q 019414           69 SDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT  148 (341)
Q Consensus        69 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l  148 (341)
                      ++++++|.....+..                     ....|+|+||++++.+.++++|+++++++++.++.++.|||+++
T Consensus       121 ~~~~~~~~~~~~~g~---------------------~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al  179 (398)
T TIGR01751       121 VGDPMLSSEQRIWGY---------------------ETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQL  179 (398)
T ss_pred             cCccccccccccccc---------------------cCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHH
Confidence            999999977543210                     01237999999999999999999999999999999999999997


Q ss_pred             hh--hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC-------------
Q 019414          149 LN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-------------  212 (341)
Q Consensus       149 ~~--~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~-------------  212 (341)
                      ..  ..++.+|++++|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++.++|+++.+             
T Consensus       180 ~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~  258 (398)
T TIGR01751       180 VGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAP  258 (398)
T ss_pred             hhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhcccccccccc
Confidence            65  467899999999997 9999999999999999 677777889999999999999999875421             


Q ss_pred             -------hhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEee
Q 019414          213 -------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTF  283 (341)
Q Consensus       213 -------~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~  283 (341)
                             ..+.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|..... ..++. ...+.++.++.++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~  335 (398)
T TIGR01751       259 KEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCRRG-GMVVICGGTTGYNHDYDN-RYLWMRQKRIQGSH  335 (398)
T ss_pred             chhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhccC-CEEEEEccccCCCCCcCH-HHHhhcccEEEccc
Confidence                   1255667777775 89999999986 6789999999998 999999875432 11211 12234566666655


Q ss_pred             ecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          284 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      ....   +++++++++++++++..  .+++.+++++++++++.+.+++. .|+|+.+.
T Consensus       336 ~~~~---~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~  388 (398)
T TIGR01751       336 FANL---REAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL  388 (398)
T ss_pred             cCcH---HHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            4332   45788999999997764  36789999999999999987775 58888764

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.6e-36  Score=279.19  Aligned_cols=308  Identities=24%  Similarity=0.375  Sum_probs=242.6

Q ss_pred             CccccccCCcCcceeeeccCCC----CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT----PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~----~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||+.++++|+.|......+..    ..+|.++|+|++|+|+++|+++++|++||+|++.+..+|+.|++|..|..+.|.
T Consensus        25 ~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~  104 (339)
T cd08232          25 RVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCL  104 (339)
T ss_pred             EEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCc
Confidence            5789999999999654322211    135789999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ...+...   ...              .....|+|++|++++.+.++++|++++.++|+. +.+++++|+++.+.... +
T Consensus       105 ~~~~~~~---~~~--------------~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~  165 (339)
T cd08232         105 NMRFLGS---AMR--------------FPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-A  165 (339)
T ss_pred             cccceee---ccc--------------cCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-C
Confidence            8533110   000              001247999999999999999999999998865 57888999987665556 9


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHh-c-CCccEEEecc
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-N-GGVDRSVECT  234 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~-~-~~~d~vld~~  234 (341)
                      +++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|++.++++++.+  +    .+.. . +++|++||+.
T Consensus       166 ~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~--~----~~~~~~~~~vd~vld~~  239 (339)
T cd08232         166 GKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP--L----AAYAADKGDFDVVFEAS  239 (339)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh--h----hhhhccCCCccEEEECC
Confidence            99999998899999999999999986788998889999999999998888876533  2    2222 2 3699999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      |+...++.++++++++ |+++.++.......... ...+.+++++.+....    ...++.++++++++.+.+.+.+++.
T Consensus       240 g~~~~~~~~~~~L~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~  313 (339)
T cd08232         240 GAPAALASALRVVRPG-GTVVQVGMLGGPVPLPL-NALVAKELDLRGSFRF----DDEFAEAVRLLAAGRIDVRPLITAV  313 (339)
T ss_pred             CCHHHHHHHHHHHhcC-CEEEEEecCCCCccCcH-HHHhhcceEEEEEecC----HHHHHHHHHHHHcCCCCchhheeEE
Confidence            8767889999999998 99999986442221111 1124466777665422    2468889999999988776667889


Q ss_pred             ecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          315 IPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      |++++++++++.+.+++. +|+|+++
T Consensus       314 ~~~~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         314 FPLEEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             ecHHHHHHHHHHHHhCCCceeEEEeC
Confidence            999999999999987764 5998864

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=3.9e-36  Score=276.71  Aligned_cols=309  Identities=28%  Similarity=0.402  Sum_probs=248.3

Q ss_pred             CccccccCCcCcceeeeccC----CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG----QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~----~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||++++++|+.|+......    ....+|.++|+|++|+|+++|++++++++||+|+..+...|+.|..|..+.+.+|.
T Consensus        27 ~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~  106 (340)
T TIGR00692        27 LIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQ  106 (340)
T ss_pred             EEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCc
Confidence            57899999999996643221    12235778999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ..+++.                      ....|++++|++++++.++++|++++.++ ++++.++.+|++++  ....++
T Consensus       107 ~~~~~~----------------------~~~~g~~~~~~~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~--~~~~~~  161 (340)
T TIGR00692       107 NTKIFG----------------------VDTDGCFAEYAVVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTV--LAGPIS  161 (340)
T ss_pred             CcceEe----------------------ecCCCcceeEEEeehHHcEECcCCCChHh-hhhcchHHHHHHHH--HccCCC
Confidence            964321                      11237999999999999999999999865 45778889998875  345789


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      |++|+|.|+|.+|++++|+|+.+|++.|+++++++++.+.++++|++.++++.+.+  +.+.+.+.+++ ++|++||++|
T Consensus       162 g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~l~~~~~~~~~d~vld~~g  239 (340)
T TIGR00692       162 GKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED--VVKEVADLTDGEGVDVFLEMSG  239 (340)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccC--HHHHHHHhcCCCCCCEEEECCC
Confidence            99999988899999999999999985588888899999999999998888876655  77888887765 8999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      +...+...+++++++ |+++.+|.......+++....+.+++.+.+..  .....+.+++++++++++++.+.+++++.+
T Consensus       240 ~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  316 (340)
T TIGR00692       240 APKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGIT--GRHMFETWYTVSRLIQSGKLDLDPIITHKF  316 (340)
T ss_pred             CHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEe--cCCchhhHHHHHHHHHcCCCChHHheeeee
Confidence            877889999999998 99999987533222222212234566665543  111224578899999999887655578999


Q ss_pred             cCCcHHHHHHHHhcCCcceEEEec
Q 019414          316 PFSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      ++++++++++.+.+++.+|+|+++
T Consensus       317 ~l~~~~~a~~~~~~~~~gkvvv~~  340 (340)
T TIGR00692       317 KFDKFEKGFELMRSGQTGKVILSL  340 (340)
T ss_pred             eHHHHHHHHHHHhcCCCceEEEeC
Confidence            999999999999877767998875

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.4e-36  Score=274.67  Aligned_cols=292  Identities=24%  Similarity=0.351  Sum_probs=235.6

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||++++++|+.|...... ..+ +|.++|||++|+|+++|++   +++||||...+..+|+.|++|..+.+++|.+...
T Consensus        28 lV~v~a~~i~~~d~~~~~g-~~~-~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (319)
T cd08242          28 LVRVLLAGICNTDLEIYKG-YYP-FPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTV  102 (319)
T ss_pred             EEEEEEEEEccccHHHHcC-CCC-CCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcc
Confidence            5889999999999665422 222 5889999999999999998   6899999999999999999999999999988544


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ..            +         ....|+|++|++++.+.++++|++++.++++.+ ..+.++|.+ .+..+++++++|
T Consensus       103 ~~------------~---------~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~-~~~~~~~~g~~v  159 (319)
T cd08242         103 LG------------I---------VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEI-LEQVPITPGDKV  159 (319)
T ss_pred             cC------------c---------cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHhcCCCCCCEE
Confidence            21            0         001379999999999999999999999887754 455566654 577889999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      ||+|+|.+|++++|+|+.+|+ +|++++.++++.+.++++|++.++++...          ..++++|++||++|+...+
T Consensus       160 lV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~d~vid~~g~~~~~  228 (319)
T cd08242         160 AVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE----------SEGGGFDVVVEATGSPSGL  228 (319)
T ss_pred             EEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc----------ccCCCCCEEEECCCChHHH
Confidence            999889999999999999999 68999899999999999999887766431          1223899999999887788


Q ss_pred             HHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcH
Q 019414          241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI  320 (341)
Q Consensus       241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i  320 (341)
                      +.++++++++ |+++..+.......++. ...+.++.++.++..      ..+++++++++++++++.+.+++.|+++++
T Consensus       229 ~~~~~~l~~~-g~~v~~~~~~~~~~~~~-~~~~~~~~~i~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~  300 (319)
T cd08242         229 ELALRLVRPR-GTVVLKSTYAGPASFDL-TKAVVNEITLVGSRC------GPFAPALRLLRKGLVDVDPLITAVYPLEEA  300 (319)
T ss_pred             HHHHHHhhcC-CEEEEEcccCCCCccCH-HHheecceEEEEEec------ccHHHHHHHHHcCCCChhhceEEEEeHHHH
Confidence            9999999997 99998775443322222 123456777776543      238889999999998766668899999999


Q ss_pred             HHHHHHHhcCCcceEEEec
Q 019414          321 NKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       321 ~ea~~~~~~~~~~k~vl~~  339 (341)
                      ++|++.+.++..+|+|+++
T Consensus       301 ~~a~~~~~~~~~~k~vi~~  319 (319)
T cd08242         301 LEAFERAAEPGALKVLLRP  319 (319)
T ss_pred             HHHHHHHhcCCceEEEeCC
Confidence            9999999877667998864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=277.37  Aligned_cols=300  Identities=22%  Similarity=0.346  Sum_probs=243.5

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +|++.++++|+.|+....... ...+|.++|||++|+|+.+|++++.+++||+|++.+..+|+.|++|..+.+++|....
T Consensus        29 ~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (334)
T PRK13771         29 VIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRL  108 (334)
T ss_pred             EEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcccc
Confidence            478999999999965432222 2356789999999999999999999999999999988999999999999999998865


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      .+.                      ....|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.+. .++++++
T Consensus       109 ~~~----------------------~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~  165 (334)
T PRK13771        109 GYG----------------------EELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGET  165 (334)
T ss_pred             ccc----------------------cccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCE
Confidence            421                      01137999999999999999999999999999999999999997665 8999999


Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      |+|+|+ |.+|++++++|+..|+ +++++++++++.+.++++ ++.+++.+  +  +.+.+++.  +++|++|||+|+ .
T Consensus       166 vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~--~--~~~~v~~~--~~~d~~ld~~g~-~  236 (334)
T PRK13771        166 VLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS--K--FSEEVKKI--GGADIVIETVGT-P  236 (334)
T ss_pred             EEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch--h--HHHHHHhc--CCCcEEEEcCCh-H
Confidence            999987 9999999999999999 788888999999999888 77666654  2  55566554  379999999987 5


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcc--cccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      ...+++++++++ |+++.+|.......  ...... +.+++++.+....   ..++++.++++++++.+..  .+++.++
T Consensus       237 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~--~~~~~~~  309 (334)
T PRK13771        237 TLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHISA---TKRDVEEALKLVAEGKIKP--VIGAEVS  309 (334)
T ss_pred             HHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecCC---CHHHHHHHHHHHHcCCCcc--eEeeeEc
Confidence            788999999998 99999997543322  122122 4567777776422   2256889999999997753  4678999


Q ss_pred             CCcHHHHHHHHhcCCc-ceEEEec
Q 019414          317 FSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++++++|++.+.+++. .|+++.+
T Consensus       310 ~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        310 LSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHHHHHcCCCcceEEEec
Confidence            9999999999987665 5888865

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.1e-35  Score=274.14  Aligned_cols=309  Identities=28%  Similarity=0.444  Sum_probs=247.8

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||+.++++|+.|+...........|.++|+|++|+|+.+|++++.|++||+|++.+...|+.|++|..+.++.|.....
T Consensus        28 ~v~v~~~~~n~~d~~~~~~~~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (343)
T cd08236          28 LVKVKACGICGSDIPRYLGTGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY  107 (343)
T ss_pred             EEEEEEEEECccchHhhcCCCCCCCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcce
Confidence            57899999999997664333333457899999999999999999999999999999999999999999999999988432


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ..                      ....|+|++|+.++.+.++++|++++++++|.+ ..+++||+++. ...++++++|
T Consensus       108 ~~----------------------~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~v  163 (343)
T cd08236         108 IG----------------------SRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTV  163 (343)
T ss_pred             Ee----------------------cccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEE
Confidence            10                      112479999999999999999999999998887 57889999975 7789999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDN  239 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~  239 (341)
                      +|+|+|.+|++++|+|+.+|+..|+++++++++.+.++++|++.++++++..   .+.++...++ ++|++|||+|+...
T Consensus       164 lI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~~~~~d~vld~~g~~~~  240 (343)
T cd08236         164 VVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED---VEKVRELTEGRGADLVIEAAGSPAT  240 (343)
T ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc---HHHHHHHhCCCCCCEEEECCCCHHH
Confidence            9998899999999999999995589998899999999999998888876542   4556666666 79999999988778


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCccccccc--ceeeecceEEEeeecCCC--CCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKP--INVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      +..++++++++ |+++.+|.......+....  ..+.++.++.++......  ..+.+++++++++++.+.+.+.+...+
T Consensus       241 ~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  319 (343)
T cd08236         241 IEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRL  319 (343)
T ss_pred             HHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeee
Confidence            89999999998 9999998654332122111  123567777776653221  135688899999999876444467889


Q ss_pred             cCCcHHHHHHHHhc-CCc-ceEEE
Q 019414          316 PFSEINKAFEYMVK-GEG-LRCII  337 (341)
Q Consensus       316 ~~~~i~ea~~~~~~-~~~-~k~vl  337 (341)
                      ++++++++++.+.+ +.. .|+|+
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         320 PLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             cHHHHHHHHHHHHcCCCCeeEEeC
Confidence            99999999999988 444 47664

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=3.2e-36  Score=277.83  Aligned_cols=282  Identities=18%  Similarity=0.215  Sum_probs=216.6

Q ss_pred             CccccccCCcCcceeeecc--C--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ--G--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~--~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++|+|+||.|+.....  +  ....+|.++|||++|+|+++|+++++|++||||+...                   
T Consensus        40 lV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------  100 (345)
T cd08293          40 LVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-------------------  100 (345)
T ss_pred             EEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC-------------------
Confidence            6899999999998543211  1  1234688999999999999999999999999998641                   


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchh----hhhccccchhhhhhhhhhc
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK----VCILSCGVSTGLGATLNVA  152 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~  152 (341)
                                                      ++|+||++++++.++++|+++++++    +++++.++.|||+++.+.+
T Consensus       101 --------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~  148 (345)
T cd08293         101 --------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKG  148 (345)
T ss_pred             --------------------------------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhc
Confidence                                            3799999999999999999864432    4567788999999987888


Q ss_pred             CCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414          153 KPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       153 ~~~~g--~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      ++++|  ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|++.++++.+.+  +.+.+++.+++++|
T Consensus       149 ~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~--~~~~i~~~~~~gvd  226 (345)
T cd08293         149 HITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDN--VAERLRELCPEGVD  226 (345)
T ss_pred             cCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCC--HHHHHHHHCCCCce
Confidence            88877  99999987 9999999999999998679999899999998876 9999999887655  88888888767899


Q ss_pred             EEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC---Ccccc--ccc--ce--eeecceEEEeeecCCCC--CCCHHHHH
Q 019414          229 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK---DAVFM--TKP--IN--VLNERTLKGTFFGNYKP--RTDLPSVV  297 (341)
Q Consensus       229 ~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~---~~~~~--~~~--~~--~~~~~~~~g~~~~~~~~--~~~~~~~~  297 (341)
                      ++||++|+ ..++.++++++++ |+++.+|....   +....  ...  ..  ..+++............  .+.+++++
T Consensus       227 ~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (345)
T cd08293         227 VYFDNVGG-EISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLS  304 (345)
T ss_pred             EEEECCCc-HHHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHH
Confidence            99999998 4679999999998 99999985321   11110  000  01  11233332222111110  12466788


Q ss_pred             HHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          298 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       298 ~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +++.++++.+.  ....++++++++|++.+.+++. +|+|+++
T Consensus       305 ~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         305 QWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            89999988755  3345699999999999988875 5998864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2e-35  Score=272.06  Aligned_cols=305  Identities=27%  Similarity=0.448  Sum_probs=248.8

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecc-cCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF-TGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~   77 (341)
                      +||++++++|+.|.........  .+.|.++|||++|+|+++|++++.+++||+|++.+ ..+|+.|.+|+.+++++|..
T Consensus        30 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~  109 (341)
T cd08297          30 LVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN  109 (341)
T ss_pred             EEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCC
Confidence            5789999999998654322221  24577899999999999999999999999999876 56899999999999999988


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      ..+..                      ....|++++|+.++.+.++++|+++++++++.++..+.|||+++.. .+++++
T Consensus       110 ~~~~~----------------------~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~  166 (341)
T cd08297         110 QKNSG----------------------YTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPG  166 (341)
T ss_pred             ccccc----------------------cccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCC
Confidence            64421                      1123699999999999999999999999999999999999999755 589999


Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      ++|||+|+ +.+|++++++|+.+|+ +|+++.+++++.+.++++|++.++++.+.+  +.+.+.+.+++ ++|++||+.+
T Consensus       167 ~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~~vd~vl~~~~  243 (341)
T cd08297         167 DWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKKSD--DVEAVKELTGGGGAHAVVVTAV  243 (341)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCCcc--HHHHHHHHhcCCCCCEEEEcCC
Confidence            99999987 7799999999999999 899999999999999999999998887654  77788887765 8999999888


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccc-eeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      +...+..++++++++ |+++.+|..... ..+.... ...++..+.+......   +.++.++++++++++.+  . ...
T Consensus       244 ~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~--~-~~~  315 (341)
T cd08297         244 SAAAYEQALDYLRPG-GTLVCVGLPPGG-FIPLDPFDLVLRGITIVGSLVGTR---QDLQEALEFAARGKVKP--H-IQV  315 (341)
T ss_pred             chHHHHHHHHHhhcC-CEEEEecCCCCC-CCCCCHHHHHhcccEEEEeccCCH---HHHHHHHHHHHcCCCcc--e-eEE
Confidence            778899999999998 999999865422 1122111 1256777776543322   57889999999998754  2 367


Q ss_pred             ecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          315 IPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      |++++++++++.+..++. .|+++++
T Consensus       316 ~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         316 VPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             EcHHHHHHHHHHHHcCCccceEEEeC
Confidence            999999999999988775 4888865

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=2.6e-35  Score=270.51  Aligned_cols=305  Identities=28%  Similarity=0.432  Sum_probs=245.5

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||++++++|+.|+..........+|+++|+|++|+|+.+|++++++++||+|++.+...|+.|.+|..+++++|.....
T Consensus        28 ~v~v~~~~l~~~d~~~~~g~~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (334)
T cd08234          28 LIKVAACGICGTDLHIYEGEFGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTA  107 (334)
T ss_pred             EEEEEEEeEchhhhHHhcCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcce
Confidence            57899999999996654443334578899999999999999999999999999999999999999999999999988632


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      .                      +....|++++|++++.+.++++|+++++.+++.+ ..+.++++++ +.+++++|++|
T Consensus       108 ~----------------------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~v  163 (334)
T cd08234         108 V----------------------GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSV  163 (334)
T ss_pred             e----------------------ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEE
Confidence            1                      0112379999999999999999999999988766 7788999987 77899999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      ||+|+|.+|++++++|+..|+..|+++++++++.+.++++|++.+++..+.+  +... +...++++|++||++|....+
T Consensus       164 lI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-~~~~~~~vd~v~~~~~~~~~~  240 (334)
T cd08234         164 LVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRED--PEAQ-KEDNPYGFDVVIEATGVPKTL  240 (334)
T ss_pred             EEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCC--HHHH-HHhcCCCCcEEEECCCChHHH
Confidence            9998899999999999999995588888999999999999998888776554  4444 333334899999999877788


Q ss_pred             HHHHHHhcCCCcEEEEEccCCCCcccccccce-eeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414          241 ISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE  319 (341)
Q Consensus       241 ~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  319 (341)
                      ..++++++++ |+++.+|.............. +.+++++.+.....    ..++++++++.++++.+.+.++..+++++
T Consensus       241 ~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  315 (334)
T cd08234         241 EQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINP----YTFPRAIALLESGKIDVKGLVSHRLPLEE  315 (334)
T ss_pred             HHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCH----HHHHHHHHHHHcCCCChhhhEEEEecHHH
Confidence            9999999998 999999865432222222211 22566666654322    46888999999998876665678899999


Q ss_pred             HHHHHHHHhcCCcceEEE
Q 019414          320 INKAFEYMVKGEGLRCII  337 (341)
Q Consensus       320 i~ea~~~~~~~~~~k~vl  337 (341)
                      ++++++.+.+....|+|+
T Consensus       316 ~~~a~~~~~~~~~~k~vi  333 (334)
T cd08234         316 VPEALEGMRSGGALKVVV  333 (334)
T ss_pred             HHHHHHHHhcCCceEEEe
Confidence            999999998833357776

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.2e-35  Score=271.76  Aligned_cols=279  Identities=17%  Similarity=0.230  Sum_probs=223.1

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCC-CCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSD-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~-~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      +||++++++|+.|+.......  ...+|.++|||++|+|+++|+++++ |++||+|++.+.                   
T Consensus        34 lv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~-------------------   94 (324)
T cd08291          34 LIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG-------------------   94 (324)
T ss_pred             EEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC-------------------
Confidence            578999999999966543222  2357899999999999999999996 999999997621                   


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                                                   .+|+|+||++++++.++++|+++++++++++++.+.|||.+ ...... ++
T Consensus        95 -----------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~  143 (324)
T cd08291          95 -----------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGM-LETARE-EG  143 (324)
T ss_pred             -----------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CC
Confidence                                         02699999999999999999999999999888889999754 455555 56


Q ss_pred             CEEEEE-C-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414          158 SSVAVF-G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  234 (341)
Q Consensus       158 ~~vlI~-G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~  234 (341)
                      ++++|+ | +|++|++++|+|+.+|+ +|+++++++++++.++++|++.++++.+.+  +.+.+++.+++ ++|++||++
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~v~~~~~~~~~d~vid~~  220 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSDPD--FLEDLKELIAKLNATIFFDAV  220 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCcc--HHHHHHHHhCCCCCcEEEECC
Confidence            666665 4 59999999999999999 789999999999999999999999887655  88888888876 899999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcc--cccccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEK  309 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~  309 (341)
                      |+ ......+++++++ |+++.+|.......  ++. ...+.+++++.++....+..   .+.+++++++++ +.+  .+
T Consensus       221 g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~  294 (324)
T cd08291         221 GG-GLTGQILLAMPYG-STLYVYGYLSGKLDEPIDP-VDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KT  294 (324)
T ss_pred             Cc-HHHHHHHHhhCCC-CEEEEEEecCCCCcccCCH-HHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--cc
Confidence            88 5667789999997 99999986543221  212 22356788888877654321   135777888887 654  45


Q ss_pred             ceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414          310 FITHRIPFSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       310 ~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      .++++|+|+|+++|++.+.+++. +|+++.
T Consensus       295 ~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         295 TFASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             ceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence            68899999999999999988765 688863

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.4e-35  Score=270.79  Aligned_cols=306  Identities=22%  Similarity=0.329  Sum_probs=247.3

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|.........  ..+|.++|||++|+|+.+|++++++++||+|++.+..+|+.|++|.++.+|+|+..
T Consensus        31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~  110 (342)
T cd08266          31 LVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQY  110 (342)
T ss_pred             EEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccc
Confidence            4788899999988554322211  24588999999999999999999999999999999999999999999999999875


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .+..                      ....|++++|+.++.+.++++|+++++++++.+++++.+|++++.+...+.+++
T Consensus       111 ~~~g----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~  168 (342)
T cd08266         111 GILG----------------------EHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGE  168 (342)
T ss_pred             cccc----------------------cccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCC
Confidence            3321                      112368999999999999999999999999999999999999988888999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +++|+|+ +.+|++++++++..|+ +++.+++++++.+.+++++.+.+++....+  +.+.+...+.+ ++|++++++|.
T Consensus       169 ~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~g~  245 (342)
T cd08266         169 TVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRKED--FVREVRELTGKRGVDVVVEHVGA  245 (342)
T ss_pred             EEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecCChH--HHHHHHHHhCCCCCcEEEECCcH
Confidence            9999987 7999999999999999 788888999999988888887777665433  66667776665 89999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                       ..+..++++++++ |+++.++...... ..... ..+.+++.+.+......   ..++.++++++++.+.+  .+++.|
T Consensus       246 -~~~~~~~~~l~~~-G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~--~~~~~~  317 (342)
T cd08266         246 -ATWEKSLKSLARG-GRLVTCGATTGYE-APIDLRHVFWRQLSILGSTMGTK---AELDEALRLVFRGKLKP--VIDSVF  317 (342)
T ss_pred             -HHHHHHHHHhhcC-CEEEEEecCCCCC-CCcCHHHHhhcceEEEEEecCCH---HHHHHHHHHHHcCCccc--ceeeeE
Confidence             6788999999998 9999998654321 11111 22456777776654332   46888899999987654  367899


Q ss_pred             cCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          316 PFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++++++++++.+.+++. .|+++++
T Consensus       318 ~~~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         318 PLEEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             cHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999999999987765 4888753

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.6e-35  Score=272.43  Aligned_cols=279  Identities=20%  Similarity=0.247  Sum_probs=223.4

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCCccccccc--eEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEA--AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~--~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++++||.|+........  ..+|+++|++.  .|++..+|+++++|++||+|+..                    
T Consensus        41 lv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~--------------------  100 (338)
T cd08295          41 LVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGF--------------------  100 (338)
T ss_pred             EEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEec--------------------
Confidence            6899999999999765433221  24578899854  45666688999999999999855                    


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeec-CceEECC-CCCCch-hhhhccccchhhhhhhhhhcC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCVAKIN-PLAPLD-KVCILSCGVSTGLGATLNVAK  153 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~-~~~~~lp-~~~~~~-~aa~l~~~~~ta~~~l~~~~~  153 (341)
                                                      |+|+||+++++ ..++++| ++++++ +++++++++.|||+++.+..+
T Consensus       101 --------------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~  148 (338)
T cd08295         101 --------------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCK  148 (338)
T ss_pred             --------------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcC
Confidence                                            58999999999 7999995 678876 789999999999999888889


Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCC-ChhHHHHHHHHhcCCccEE
Q 019414          154 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       154 ~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~-~~~~~~~i~~~~~~~~d~v  230 (341)
                      +++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+++ +|++.++++.+. +  +.+.+++.+++++|++
T Consensus       149 ~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~--~~~~i~~~~~~gvd~v  225 (338)
T cd08295         149 PKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPD--LDAALKRYFPNGIDIY  225 (338)
T ss_pred             CCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCCccc--HHHHHHHhCCCCcEEE
Confidence            999999999987 9999999999999999 78888899999999998 999999986543 3  7777777776689999


Q ss_pred             EeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcc------cccccceeeecceEEEeeecCCCC--CCCHHHHHHHHHC
Q 019414          231 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV------FMTKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMYMN  302 (341)
Q Consensus       231 ld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~  302 (341)
                      ||++|+ ..+..++++++++ |+++.+|.......      .++ ...+.+++++.++.......  ...++++++++.+
T Consensus       226 ~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~  302 (338)
T cd08295         226 FDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNL-LNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKE  302 (338)
T ss_pred             EECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCH-HHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHC
Confidence            999987 7889999999998 99999986443211      111 12245677777755433211  1246788999999


Q ss_pred             CCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          303 KQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       303 ~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +++.+.  +...|+++++++|++.+.+++. +|+|+++
T Consensus       303 g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         303 GKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             CCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            988764  3456999999999999988876 5998864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-35  Score=270.15  Aligned_cols=290  Identities=24%  Similarity=0.299  Sum_probs=228.8

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||+.++++|+.|...........+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|++|+.+.+|+|+...+
T Consensus        30 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~  109 (325)
T cd08264          30 LIRVKMAGVNPVDYNVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI  109 (325)
T ss_pred             EEEEEEEEechHHHHHHhCCCCCCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccce
Confidence            47889999999985543221112357799999999999999999999999999999999999999999999999997543


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ..                      ....|+|++|++++.+.++++|+++++++++.+++.+.+||+++.. .++++|++|
T Consensus       110 ~~----------------------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~v  166 (325)
T cd08264         110 IG----------------------VVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETV  166 (325)
T ss_pred             ee----------------------ccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEE
Confidence            21                      1123799999999999999999999999999999999999999754 889999999


Q ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      +|+|+ |++|++++++|+..|+ .|+++.+    .+.++++|++.+++..+    ..+.++.++ +++|+++|++|+ ..
T Consensus       167 lI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~~----~~~~l~~~~-~~~d~vl~~~g~-~~  235 (325)
T cd08264         167 VVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYDE----VEEKVKEIT-KMADVVINSLGS-SF  235 (325)
T ss_pred             EEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecchH----HHHHHHHHh-CCCCEEEECCCH-HH
Confidence            99997 9999999999999999 6777752    36778899988887643    344566666 689999999987 68


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCC-CcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          240 MISAFECVHDGWGVAVLVGVPSK-DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      ++.++++++++ |+++.+|.... ...++. ...+.++..+.++..+..   +.++++++++...+    ..+++.|+++
T Consensus       236 ~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~----~~~~~~~~~~  306 (325)
T cd08264         236 WDLSLSVLGRG-GRLVTFGTLTGGEVKLDL-SDLYSKQISIIGSTGGTR---KELLELVKIAKDLK----VKVWKTFKLE  306 (325)
T ss_pred             HHHHHHhhccC-CEEEEEecCCCCCCccCH-HHHhhcCcEEEEccCCCH---HHHHHHHHHHHcCC----ceeEEEEcHH
Confidence            99999999998 99999986421 111221 112334556666543322   56888888885432    2356889999


Q ss_pred             cHHHHHHHHhcCCcc
Q 019414          319 EINKAFEYMVKGEGL  333 (341)
Q Consensus       319 ~i~ea~~~~~~~~~~  333 (341)
                      ++++|++.+.+++..
T Consensus       307 ~~~~a~~~~~~~~~~  321 (325)
T cd08264         307 EAKEALKELFSKERD  321 (325)
T ss_pred             HHHHHHHHHHcCCCc
Confidence            999999998876654

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=2.6e-35  Score=269.62  Aligned_cols=275  Identities=19%  Similarity=0.249  Sum_probs=218.6

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++++||.++... . .....|.|+|.|++|+|+++|+   .|++||||+..                        
T Consensus        35 lv~v~a~~~n~~~~~g~-~-~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------------------------   85 (325)
T TIGR02825        35 LLEALFLSVDPYMRVAA-K-RLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------------------------   85 (325)
T ss_pred             EEEEEEEecCHHHhccc-C-cCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe------------------------
Confidence            68999999999764322 1 1123478999999999999874   59999999965                        


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEEC----CCCCCchhh-hhccccchhhhhhhhhhcCCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI----NPLAPLDKV-CILSCGVSTGLGATLNVAKPE  155 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~l----p~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~  155 (341)
                                                  ++|++|+.++.+.+.++    |++++++++ +++++++.|||+++.+..+++
T Consensus        86 ----------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~  137 (325)
T TIGR02825        86 ----------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVK  137 (325)
T ss_pred             ----------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCC
Confidence                                        36899999999998888    899999987 679999999999988889999


Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      +|++|||+|+ |++|++++|+||..|+ +|+++++++++.+.++++|++.++++.+.+ .+.+.++..+++++|++||++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~~~~~~~~~gvdvv~d~~  215 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEETLKKASPDGYDCYFDNV  215 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHHHHHHhCCCCeEEEEECC
Confidence            9999999985 9999999999999999 899998999999999999999999887532 266666666655899999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCC---cccc---cccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKD---AVFM---TKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQL  305 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~---~~~~---~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i  305 (341)
                      |+ ..++.++++++++ |+++.+|.....   ...+   .....+.+++++.++....+..   .+.+++++++++++++
T Consensus       216 G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l  293 (325)
T TIGR02825       216 GG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKI  293 (325)
T ss_pred             CH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCc
Confidence            87 5779999999998 999999864321   0111   1112234677777765432211   1357889999999988


Q ss_pred             CCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414          306 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       306 ~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      .+.  +...|+++++++|++.+.+++. +|+|++
T Consensus       294 ~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       294 QYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             ccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            765  3466899999999999988876 488763

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=9.4e-35  Score=266.28  Aligned_cols=300  Identities=26%  Similarity=0.424  Sum_probs=239.2

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +|+++++++|+.|+....... ..++|.++|||++|+|+++|++++.+++||+|++....+|+.|++|+.+.+++|+...
T Consensus        29 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (332)
T cd08259          29 LIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA  108 (332)
T ss_pred             EEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCcc
Confidence            578999999999966543222 2346789999999999999999999999999999999999999999999999998742


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      ..   |                   ....|+|++|++++.+.++++|+++++++++.+++++.+||+++.. ..+.++++
T Consensus       109 ~~---~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~  165 (332)
T cd08259         109 EY---G-------------------EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDT  165 (332)
T ss_pred             cc---c-------------------cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCE
Confidence            11   1                   1124799999999999999999999999999999999999999766 88999999


Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +||+|+ |.+|++++++++..|+ .|+++.+++++.+.+++++.+.+++..+    +.+.+....  ++|++++++|. .
T Consensus       166 vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~d~v~~~~g~-~  237 (332)
T cd08259         166 VLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK----FSEDVKKLG--GADVVIELVGS-P  237 (332)
T ss_pred             EEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH----HHHHHHhcc--CCCEEEECCCh-H
Confidence            999987 9999999999999999 7888888888888898899877775533    444454443  69999999987 5


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCccc-ccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVF-MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      ....+++++.++ |+++.++........ .... ...++..+.++...   ...+++++++++.++.+.+  .+++.+++
T Consensus       238 ~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~--~~~~~~~~  310 (332)
T cd08259         238 TIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGL-LILKEIRIIGSISA---TKADVEEALKLVKEGKIKP--VIDRVVSL  310 (332)
T ss_pred             HHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHH-HHhCCcEEEEecCC---CHHHHHHHHHHHHcCCCcc--ceeEEEcH
Confidence            678899999997 999999865432211 1111 12356666655321   1246888999999997653  46789999


Q ss_pred             CcHHHHHHHHhcCCc-ceEEEe
Q 019414          318 SEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      +++++|++.+.+++. .|+|++
T Consensus       311 ~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         311 EDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHHHHHcCCcccEEEeC
Confidence            999999999988775 477763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-34  Score=265.85  Aligned_cols=294  Identities=23%  Similarity=0.329  Sum_probs=236.0

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||+.++++|+.|........ ...+|+++|||++|+|+++|+++.++++||+|++.+. .+|++|++|+++..|+|...
T Consensus        33 ~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (329)
T cd08298          33 LIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNA  112 (329)
T ss_pred             EEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCc
Confidence            478899999999855432221 2356889999999999999999999999999987654 58999999999999999987


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .+..            +          ...|+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ..+++++++
T Consensus       113 ~~~~------------~----------~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~  169 (329)
T cd08298         113 RFTG------------Y----------TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQ  169 (329)
T ss_pred             cccc------------c----------ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCC
Confidence            6531            1          1136999999999999999999999999999999999999997 889999999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +++|+|+|++|++++++++..|+ +|+++.+++++++.++++|++.+++....           .++++|+++++.+...
T Consensus       170 ~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~vD~vi~~~~~~~  237 (329)
T cd08298         170 RLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL-----------PPEPLDAAIIFAPVGA  237 (329)
T ss_pred             EEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc-----------CCCcccEEEEcCCcHH
Confidence            99999999999999999999998 88999899999999999999877766432           1237999999877778


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      .++.++++++++ |+++.+|...... .......+.++..+.++.....   ..++.++++++++.+.+   .++.|+++
T Consensus       238 ~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~l~~---~~~~~~~~  309 (329)
T cd08298         238 LVPAALRAVKKG-GRVVLAGIHMSDI-PAFDYELLWGEKTIRSVANLTR---QDGEEFLKLAAEIPIKP---EVETYPLE  309 (329)
T ss_pred             HHHHHHHHhhcC-CEEEEEcCCCCCC-CccchhhhhCceEEEEecCCCH---HHHHHHHHHHHcCCCCc---eEEEEeHH
Confidence            899999999998 9999988532211 1111111334555655542221   46788999999997765   25889999


Q ss_pred             cHHHHHHHHhcCCcc-eEEE
Q 019414          319 EINKAFEYMVKGEGL-RCII  337 (341)
Q Consensus       319 ~i~ea~~~~~~~~~~-k~vl  337 (341)
                      ++++|+..+.+++.. |+|+
T Consensus       310 ~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         310 EANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             HHHHHHHHHHcCCCcceeeC
Confidence            999999999887764 7653

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-34  Score=267.20  Aligned_cols=294  Identities=22%  Similarity=0.248  Sum_probs=230.0

Q ss_pred             CccccccCCcCcceeeeccC---------------------CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC
Q 019414            1 MLSQKHNSFNPRNFVFGFQG---------------------QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG   59 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~---------------------~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~   59 (341)
                      +||++++++|+.|.......                     ...++|.++|||++|+|+++|+++++|++||+|++.+..
T Consensus        32 ~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  111 (350)
T cd08274          32 LIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSI  111 (350)
T ss_pred             EEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCc
Confidence            47899999999986543211                     123468899999999999999999999999999999888


Q ss_pred             CCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccc
Q 019414           60 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC  139 (341)
Q Consensus        60 ~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~  139 (341)
                      +|+.|+.|..     |....                         ....|++++|+.++.+.++++|+++++++++++++
T Consensus       112 ~~~~~~~~~~-----~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~  161 (350)
T cd08274         112 RDPPEDDPAD-----IDYIG-------------------------SERDGGFAEYTVVPAENAYPVNSPLSDVELATFPC  161 (350)
T ss_pred             CCCCcccccc-----ccccC-------------------------CCCCccceEEEEecHHHceeCCCCCCHHHHHhccc
Confidence            8888776532     21100                         00136999999999999999999999999999999


Q ss_pred             cchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHH
Q 019414          140 GVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV  218 (341)
Q Consensus       140 ~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~  218 (341)
                      ++.|||+++ ...++++|++|||+|+ |++|++++++|+.+|+ +++++.+++ +++.++++|++.+++.....  +.+ 
T Consensus       162 ~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~-  235 (350)
T cd08274         162 SYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAA-KEEAVRALGADTVILRDAPL--LAD-  235 (350)
T ss_pred             HHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCch-hhHHHHhcCCeEEEeCCCcc--HHH-
Confidence            999999986 7788999999999997 9999999999999999 677776665 78888999997665543332  333 


Q ss_pred             HHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCCCCCHHHH
Q 019414          219 IAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSV  296 (341)
Q Consensus       219 i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  296 (341)
                       ...+.+ ++|++||++|+ ..++.++++++++ |+++.+|..... ..++. ...+.++.++.++.....   ..++++
T Consensus       236 -~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~  308 (350)
T cd08274         236 -AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAGPVVELDL-RTLYLKDLTLFGSTLGTR---EVFRRL  308 (350)
T ss_pred             -HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCCccccCCH-HHhhhcceEEEEeecCCH---HHHHHH
Confidence             344454 89999999987 6889999999998 999999864322 11221 122567888887765432   568899


Q ss_pred             HHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          297 VDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       297 ~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++++.++++.+  ++++.|++++++++++.+.+++. .|+|+.+
T Consensus       309 ~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~  350 (350)
T cd08274         309 VRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP  350 (350)
T ss_pred             HHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence            99999997753  36788999999999999987765 4888754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=1.9e-34  Score=264.41  Aligned_cols=300  Identities=25%  Similarity=0.405  Sum_probs=238.7

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|........ ...+|.++|||++|+|+++|++++++++||+|++.+. .+|+.|++|+++++|+|.+.
T Consensus        28 ~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (330)
T cd08245          28 LIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKA  107 (330)
T ss_pred             EEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCc
Confidence            478899999999865543222 2346889999999999999999999999999988655 57999999999999999996


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .+..            +          ...|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.. ..+.+++
T Consensus       108 ~~~~------------~----------~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~  164 (330)
T cd08245         108 VNTG------------Y----------TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGE  164 (330)
T ss_pred             cccC------------c----------ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCC
Confidence            5421            0          013699999999999999999999999999999999999998754 7899999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|||+|+|.+|++++++|+.+|. +|+++++++++.+.++++|++.+++....+  ....    ..+++|+++|++++..
T Consensus       165 ~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~----~~~~~d~vi~~~~~~~  237 (330)
T cd08245         165 RVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAEL--DEQA----AAGGADVILVTVVSGA  237 (330)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCcc--hHHh----ccCCCCEEEECCCcHH
Confidence            99999888899999999999999 889998999999999999998887765433  2222    2247999999988778


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      ....++++++++ |+++.++..............+.++.++.++.....   ..++.+++++.++.+.+   ..+.++++
T Consensus       238 ~~~~~~~~l~~~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~~l~~---~~~~~~~~  310 (330)
T cd08245         238 AAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGR---ADLQEALDFAAEGKVKP---MIETFPLD  310 (330)
T ss_pred             HHHHHHHhcccC-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCCH---HHHHHHHHHHHcCCCcc---eEEEEcHH
Confidence            889999999998 999999864322111111122345666666554322   46788899999998764   35789999


Q ss_pred             cHHHHHHHHhcCCcc-eEEE
Q 019414          319 EINKAFEYMVKGEGL-RCII  337 (341)
Q Consensus       319 ~i~ea~~~~~~~~~~-k~vl  337 (341)
                      +++++++.+.+++.. |+|+
T Consensus       311 ~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         311 QANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHHHcCCCCcceeC
Confidence            999999999887764 6653

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.1e-34  Score=265.59  Aligned_cols=275  Identities=21%  Similarity=0.254  Sum_probs=219.6

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++++||.++.+..  ....+|.++|+|++|+|++   .+++|++||||+..                        
T Consensus        37 lVkv~a~~in~~~~~~~~--~~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~------------------------   87 (329)
T cd08294          37 LCEALFLSVDPYMRPYSK--RLNEGDTMIGTQVAKVIES---KNSKFPVGTIVVAS------------------------   87 (329)
T ss_pred             EEEEEEEecCHHHhcccc--cCCCCCcEecceEEEEEec---CCCCCCCCCEEEee------------------------
Confidence            689999999998754321  1224688999999999995   45689999999865                        


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecC---ceEECCCCCCc-----hhhhhccccchhhhhhhhhhc
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG---CVAKINPLAPL-----DKVCILSCGVSTGLGATLNVA  152 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~---~~~~lp~~~~~-----~~aa~l~~~~~ta~~~l~~~~  152 (341)
                                                  +++++|++++.+   .++++|+++++     ..++++++++.|||+++.+..
T Consensus        88 ----------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~  139 (329)
T cd08294          88 ----------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEIC  139 (329)
T ss_pred             ----------------------------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhc
Confidence                                        378999999999   99999999982     233468889999999988889


Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      ++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++.++++++.+  +.+.+++.+++++|++|
T Consensus       140 ~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~--~~~~v~~~~~~gvd~vl  216 (329)
T cd08294         140 KPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKTVS--LEEALKEAAPDGIDCYF  216 (329)
T ss_pred             CCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHCCCCcEEEE
Confidence            9999999999985 9999999999999999 799998999999999999999999987665  78888887767899999


Q ss_pred             eccCChHHHHHHHHHhcCCCcEEEEEccCCCCcc--c---c-cccceeeecceEEEeeecCCC--CCCCHHHHHHHHHCC
Q 019414          232 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F---M-TKPINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNK  303 (341)
Q Consensus       232 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~---~-~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~  303 (341)
                      |++|+ +.++.++++++++ |+++.+|.......  .   . .....+.+++++.++....+.  ..+.+++++++++++
T Consensus       217 d~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g  294 (329)
T cd08294         217 DNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEG  294 (329)
T ss_pred             ECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCC
Confidence            99988 7889999999998 99999985322110  0   0 111224567777776543321  112467888999999


Q ss_pred             CCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          304 QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       304 ~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++.+.+  ...++++++++|++.+.+++. +|+|+++
T Consensus       295 ~i~~~~--~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         295 KLKYRE--HVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             CCcCCc--ccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            887652  356899999999999988875 5988864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=3.2e-34  Score=242.55  Aligned_cols=284  Identities=21%  Similarity=0.341  Sum_probs=221.6

Q ss_pred             CccccccCCcCcceeeeccCC---CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      +||.-|+.|||+| .++-++.   .|++|.|-|.|++|+|+.+|+++++|++||+|+....                   
T Consensus        51 ~Vk~LAaPINPsD-IN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a-------------------  110 (354)
T KOG0025|consen   51 LVKMLAAPINPSD-INQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSA-------------------  110 (354)
T ss_pred             eeeeeecCCChHH-hhhhccccCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCC-------------------
Confidence            5788899999999 5544444   3578999999999999999999999999999997632                   


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                                                   +.|+|++|.+.+++.++++++.++++.||++....+|||++|.+.-++.+|
T Consensus       111 -----------------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~G  161 (354)
T KOG0025|consen  111 -----------------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKG  161 (354)
T ss_pred             -----------------------------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCC
Confidence                                         358999999999999999999999999999999999999999999999999


Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH----HHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEE
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF----EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSV  231 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~----~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vl  231 (341)
                      |+|+-.|+ +++|++.+|+||++|++.+-++ |+....    +.++.+||++|+..++-.+  .+..+..... .+.+.|
T Consensus       162 D~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~lGA~~ViTeeel~~--~~~~k~~~~~~~prLal  238 (354)
T KOG0025|consen  162 DSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKSLGATEVITEEELRD--RKMKKFKGDNPRPRLAL  238 (354)
T ss_pred             CeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHHcCCceEecHHHhcc--hhhhhhhccCCCceEEE
Confidence            98887787 9999999999999999655555 544333    3466799999985544221  1111111223 789999


Q ss_pred             eccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCC--------CCHHHHHHHHHCC
Q 019414          232 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR--------TDLPSVVDMYMNK  303 (341)
Q Consensus       232 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~~~  303 (341)
                      ||+|+. .-.+..+.|..+ |.++.+|.+......-.+..+++|++.++|+++..+...        +.+.++.+++..|
T Consensus       239 NcVGGk-sa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G  316 (354)
T KOG0025|consen  239 NCVGGK-SATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRG  316 (354)
T ss_pred             eccCch-hHHHHHHHHhcC-ceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcC
Confidence            999994 445677899997 999999977655433334556789999999998766422        2466788999999


Q ss_pred             CCCCCCceeeeecCCcHHHHHHHHhcCC--cceEEEecC
Q 019414          304 QLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISME  340 (341)
Q Consensus       304 ~i~~~~~~~~~~~~~~i~ea~~~~~~~~--~~k~vl~~~  340 (341)
                      +|..+  ..+..+|++.+.|++...+..  ..|-+|.++
T Consensus       317 ~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e  353 (354)
T KOG0025|consen  317 KLKAP--NCEKVPLADHKTALDAALSKFGKSGKQIIVLE  353 (354)
T ss_pred             eeccc--cceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence            88655  357889999999998654433  346666553

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=3.7e-34  Score=261.63  Aligned_cols=279  Identities=20%  Similarity=0.259  Sum_probs=226.5

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||++++++|+.|........  .+.+|.++|||++|+|+++|++++++++||+|++.+.                    
T Consensus        32 ~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--------------------   91 (324)
T cd08292          32 LVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV--------------------   91 (324)
T ss_pred             EEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccC--------------------
Confidence            578999999999865542222  2346889999999999999999999999999997631                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|++|++++...++++|+++++++++.+++.+.++|+++ +..++++|+
T Consensus        92 -----------------------------~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~  141 (324)
T cd08292          92 -----------------------------HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQ  141 (324)
T ss_pred             -----------------------------CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCC
Confidence                                         26999999999999999999999999999998899999986 558899999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|||+|+ |.+|++++|+|+.+|+ .++++.+++++.+.++++|++.++++.+.+  +.+.+...+++ ++|++||++|+
T Consensus       142 ~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~d~~g~  218 (324)
T cd08292         142 WLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQPG--WQDKVREAAGGAPISVALDSVGG  218 (324)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCCch--HHHHHHHHhCCCCCcEEEECCCC
Confidence            9999986 9999999999999999 778887888888888889998888876655  78888888887 99999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCC-------CCCCHHHHHHHHHCCCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYK-------PRTDLPSVVDMYMNKQLELE  308 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~~~~~~~i~~~  308 (341)
                       .....++++++++ |+++.+|..... ..... ...+.+++++.++......       ....++.+++++.++.+.+.
T Consensus       219 -~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~  295 (324)
T cd08292         219 -KLAGELLSLLGEG-GTLVSFGSMSGE-PMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP  295 (324)
T ss_pred             -hhHHHHHHhhcCC-cEEEEEecCCCC-CCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc
Confidence             5778999999998 999999865321 11111 1124578888877653211       11357889999999988654


Q ss_pred             CceeeeecCCcHHHHHHHHhcCCc-ceEEE
Q 019414          309 KFITHRIPFSEINKAFEYMVKGEG-LRCII  337 (341)
Q Consensus       309 ~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl  337 (341)
                        +.+.|+++++++|++.+.+++. .|+++
T Consensus       296 --~~~~~~~~~~~~a~~~~~~~~~~~kvvv  323 (324)
T cd08292         296 --VEAVFDLGDAAKAAAASMRPGRAGKVLL  323 (324)
T ss_pred             --cccEecHHHHHHHHHHHHcCCCCceEEe
Confidence              4688999999999999987664 47776

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-33  Score=256.26  Aligned_cols=271  Identities=25%  Similarity=0.410  Sum_probs=221.1

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||+.++++|+.|........ ...+|.++|+|++|+|+.+|++++.+++||+|++.+. .+|+.|++|.++.++.|...
T Consensus        30 ~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (306)
T cd08258          30 LIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHR  109 (306)
T ss_pred             EEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCC
Confidence            578999999999854432222 2245789999999999999999999999999999875 68999999999999999874


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      +.+.                      ....|+|++|++++.+.++++|+++++++++ ++..+.++|+++....++++++
T Consensus       110 ~~~~----------------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~  166 (306)
T cd08258         110 KGIG----------------------TQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGD  166 (306)
T ss_pred             ceee----------------------ecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCC
Confidence            3210                      1123799999999999999999999999876 7778899999988888999999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEE--cCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v--~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      +|||.|+|.+|++++++|+..|+ +|+++  .+++++.+.++++|++.+ ++...+  +.+.++..+++ ++|++||++|
T Consensus       167 ~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~--~~~~l~~~~~~~~vd~vld~~g  242 (306)
T cd08258         167 TVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGEED--LAELVNEITDGDGADVVIECSG  242 (306)
T ss_pred             EEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCcCC--HHHHHHHHcCCCCCCEEEECCC
Confidence            99998889999999999999999 67665  345667888999999877 776655  77788877765 8999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK  303 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  303 (341)
                      +...++..+++++++ |+++.+|..... ..+++ ...+.+++++.|+..+..   ++++++++++++|
T Consensus       243 ~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~~~~~  306 (306)
T cd08258         243 AVPALEQALELLRKG-GRIVQVGIFGPLAASIDV-ERIIQKELSVIGSRSSTP---ASWETALRLLASG  306 (306)
T ss_pred             ChHHHHHHHHHhhcC-CEEEEEcccCCCCcccCH-HHHhhcCcEEEEEecCch---HhHHHHHHHHhcC
Confidence            778899999999998 999999986521 22222 223468999999887654   6799999998765

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-33  Score=251.12  Aligned_cols=265  Identities=30%  Similarity=0.463  Sum_probs=216.9

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      ||++.++++|+.|........  ...+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|++|+.    .|...
T Consensus         3 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~   78 (271)
T cd05188           3 LVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGG   78 (271)
T ss_pred             EEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCC
Confidence            588999999999966543322  245688999999999999999999999999999999999999999997    67665


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      ....                      ....|++++|+.++.+.++++|+++++++++.+++++.+||+++.....+++++
T Consensus        79 ~~~~----------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~  136 (271)
T cd05188          79 GILG----------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGD  136 (271)
T ss_pred             CEec----------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCC
Confidence            4321                      112479999999999999999999999999999999999999987777779999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      +|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++..+.+  +.+.+. ...+ ++|++||+++..
T Consensus       137 ~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~~~  212 (271)
T cd05188         137 TVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVGGP  212 (271)
T ss_pred             EEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCCCH
Confidence            99999986699999999999997 899999999999999999998888776655  555555 4444 899999999886


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHH
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM  299 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  299 (341)
                      ..++.++++++++ |+++.++..............+.+++++.++.....   .++++++++
T Consensus       213 ~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  270 (271)
T cd05188         213 ETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL  270 (271)
T ss_pred             HHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence            7888999999998 999999876544333222334568888888776543   456666654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.8e-32  Score=251.49  Aligned_cols=300  Identities=26%  Similarity=0.343  Sum_probs=238.3

Q ss_pred             CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|+......  ..+.+|.++|||++|+|+++|++++++++||+|++.....|+.|.+      ++|...
T Consensus        31 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~------~~~~~~  104 (336)
T cd08276          31 LVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPP------TAEDEA  104 (336)
T ss_pred             EEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEecccccccccc------cccccc
Confidence            47888999999986654322  2234688999999999999999999999999999987666655444      344221


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      ..            ++          ....|+|++|+.++.+.++++|+++++.+++.++..+.+||+++.+...+++|+
T Consensus       105 ~~------------~~----------~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~  162 (336)
T cd08276         105 SA------------LG----------GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGD  162 (336)
T ss_pred             cc------------cc----------cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCC
Confidence            11            00          112469999999999999999999999999999999999999988888999999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|+|+|+|++|++++++|+..|+ +|++++.++++.+.++++|++.+++... .+  +.+.++..+++ ++|+++|+++.
T Consensus       163 ~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~  239 (336)
T cd08276         163 TVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPD--WGEEVLKLTGGRGVDHVVEVGGP  239 (336)
T ss_pred             EEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCcccC--HHHHHHHHcCCCCCcEEEECCCh
Confidence            99999889999999999999999 7888989999999999999988887765 44  77778888876 99999999975


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                       ..+..++++++++ |+++.+|..............+.+++++.+......   ..+++++++++++.+.+.  .++.++
T Consensus       240 -~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l~~~--~~~~~~  312 (336)
T cd08276         240 -GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSR---AQFEAMNRAIEAHRIRPV--IDRVFP  312 (336)
T ss_pred             -HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcH---HHHHHHHHHHHcCCcccc--cCcEEe
Confidence             6788999999998 999999865433211111223567888888765432   568889999988866543  568899


Q ss_pred             CCcHHHHHHHHhcCCc-ceEEEe
Q 019414          317 FSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      +++++++++.+.+++. .|++++
T Consensus       313 ~~~~~~a~~~~~~~~~~~kvv~~  335 (336)
T cd08276         313 FEEAKEAYRYLESGSHFGKVVIR  335 (336)
T ss_pred             HHHHHHHHHHHHhCCCCceEEEe
Confidence            9999999999987775 488875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.5e-32  Score=252.91  Aligned_cols=283  Identities=23%  Similarity=0.330  Sum_probs=224.1

Q ss_pred             CccccccCCcCcceeeeccCCC--CC----CCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PL----FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM   74 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~----~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~   74 (341)
                      +||++++++|+.|.........  +.    +|.++|||++|+|+++|+++..+++||+|+++..                
T Consensus        33 ~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~----------------   96 (341)
T cd08290          33 LVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP----------------   96 (341)
T ss_pred             EEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCC----------------
Confidence            5789999999998665433222  12    5779999999999999999999999999997631                


Q ss_pred             CccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCC
Q 019414           75 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  154 (341)
Q Consensus        75 c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~  154 (341)
                                                      ..|+|++|+.++.+.++++|+++++++++.+++.+.|||+++.....+
T Consensus        97 --------------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~  144 (341)
T cd08290          97 --------------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKL  144 (341)
T ss_pred             --------------------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhccc
Confidence                                            126999999999999999999999999999999999999998777889


Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh----hhHHHHHHcCCceecCCCCC---ChhHHHHHHHHhcCC
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAKKFGVTDFVNTSEH---DRPIQEVIAEMTNGG  226 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~----~~~~~~~~~g~~~vv~~~~~---~~~~~~~i~~~~~~~  226 (341)
                      ++|++|||+|+ |++|++++|+|+..|+ +++++.+++    ++.+.++++|++.++++++.   +  +.+.++...+++
T Consensus       145 ~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~i~~~~~~~  221 (341)
T cd08290         145 QPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEELRSLL--ATELLKSAPGGR  221 (341)
T ss_pred             CCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHhcCCCEEEeCccccccc--HHHHHHHHcCCC
Confidence            99999999986 9999999999999999 666665655    67888899999999887654   3  666777666558


Q ss_pred             ccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCC----CC---CCHHHHHH
Q 019414          227 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYK----PR---TDLPSVVD  298 (341)
Q Consensus       227 ~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~----~~---~~~~~~~~  298 (341)
                      +|++|||+|+ ......+++++++ |+++.++...... .++. ...+.+++++.+.......    +.   ..++.+++
T Consensus       222 ~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (341)
T cd08290         222 PKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQPVTVPT-SLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAE  298 (341)
T ss_pred             ceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCCCcccCH-HHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHH
Confidence            9999999998 5677889999998 9999998543321 1221 1225678888877643321    10   14778889


Q ss_pred             HHHCCCCCCCCceeeee---cCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          299 MYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       299 ~~~~~~i~~~~~~~~~~---~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++.++.+.+.  ....+   ++++++++++.+.+++. .|+|+++
T Consensus       299 ~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         299 LIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            9999987654  34556   99999999999987775 4988864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2.7e-32  Score=250.61  Aligned_cols=281  Identities=17%  Similarity=0.197  Sum_probs=218.0

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||++++++|+.|........ ...+|.++|+|++|+|+++|+++++|++||+|+....                     
T Consensus        33 ~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~---------------------   91 (336)
T TIGR02817        33 LVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD---------------------   91 (336)
T ss_pred             EEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC---------------------
Confidence            478999999999965442222 2356889999999999999999999999999986510                     


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC---
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER---  156 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~---  156 (341)
                                               ....|+|++|++++.+.++++|+++++++++.+++++.|||+++....++++   
T Consensus        92 -------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~  146 (336)
T TIGR02817        92 -------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVA  146 (336)
T ss_pred             -------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCC
Confidence                                     0013799999999999999999999999999999999999999878888877   


Q ss_pred             --CCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          157 --GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       157 --g~~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                        |++|||+|+ |++|++++|+|+.+ |+ +|+++.+++++.+.++++|++.++++.. +  +.+.+++..++++|+++|
T Consensus       147 ~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~--~~~~i~~~~~~~vd~vl~  222 (336)
T TIGR02817       147 GDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK-P--LKAQLEKLGLEAVSYVFS  222 (336)
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC-C--HHHHHHHhcCCCCCEEEE
Confidence              999999986 99999999999998 98 8999989999999999999999887654 3  777777754458999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecC--C--CC-----CCCHHHHHHHHHCC
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN--Y--KP-----RTDLPSVVDMYMNK  303 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~--~~-----~~~~~~~~~~~~~~  303 (341)
                      ++++......++++++++ |+++.++...   .++..+ ...+++.+.+.....  .  .+     ...++++++++.++
T Consensus       223 ~~~~~~~~~~~~~~l~~~-G~~v~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  297 (336)
T TIGR02817       223 LTHTDQHFKEIVELLAPQ-GRFALIDDPA---ELDISP-FKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAG  297 (336)
T ss_pred             cCCcHHHHHHHHHHhccC-CEEEEEcccc---cccchh-hhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCC
Confidence            987768899999999998 9999885321   122111 122335444432220  0  00     02467889999999


Q ss_pred             CCCCCCceeeee---cCCcHHHHHHHHhcCCc-ceEEEe
Q 019414          304 QLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       304 ~i~~~~~~~~~~---~~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      .+.+.  +++.+   +++++++|++.+.+++. .|+++.
T Consensus       298 ~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       298 KIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             Ceecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            77543  33444   46899999999988876 477764

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=3.3e-32  Score=248.63  Aligned_cols=283  Identities=18%  Similarity=0.194  Sum_probs=227.4

Q ss_pred             CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +|+++++++|+.|+.......    ...+|.++|||++|+|+++|++++.+++||+|++...                  
T Consensus        31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~------------------   92 (324)
T cd08244          31 RIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG------------------   92 (324)
T ss_pred             EEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccC------------------
Confidence            478899999999865432221    2345789999999999999999999999999997631                  


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                                                   ...|+|++|+.++.+.++++|+++++++++++++.+.||| ++....++++
T Consensus        93 -----------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~  142 (324)
T cd08244          93 -----------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTP  142 (324)
T ss_pred             -----------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCC
Confidence                                         0137999999999999999999999999999999999995 5577789999


Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  234 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~  234 (341)
                      +++|+|+|+ |.+|++++++|+.+|+ .|+++++++++.+.++++|++.+++..+.+  +.+.+...+++ ++|+++|++
T Consensus       143 ~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~  219 (324)
T cd08244         143 GDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTRPD--WPDQVREALGGGGVTVVLDGV  219 (324)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHcCCCCceEEEECC
Confidence            999999985 9999999999999999 789998999999999999998888776655  77777777776 899999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      |+. ..+.++++++++ |+++.+|....... ... ...+.+++.+.+.......+   .+.++++++++.++++..  +
T Consensus       220 g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~  294 (324)
T cd08244         220 GGA-IGRAALALLAPG-GRFLTYGWASGEWT-ALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP--V  294 (324)
T ss_pred             ChH-hHHHHHHHhccC-cEEEEEecCCCCCC-ccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC--c
Confidence            884 668999999997 99999987543321 221 12246777777766543211   135677888999987753  3


Q ss_pred             eeeeecCCcHHHHHHHHhcCCcc-eEEEec
Q 019414          311 ITHRIPFSEINKAFEYMVKGEGL-RCIISM  339 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~~-k~vl~~  339 (341)
                      ++..|+++++++|++.+.+++.. |+++++
T Consensus       295 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         295 VGQTFPLERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             cceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence            67889999999999999887754 888764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.6e-32  Score=245.34  Aligned_cols=280  Identities=25%  Similarity=0.313  Sum_probs=221.0

Q ss_pred             CccccccCCcCcceeee-ccCC---CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFG-FQGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~-~~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||+.++++|+.|.... ....   .+.+|.++|+|++|+|+++|++++++++||+|++..                   
T Consensus        23 ~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------   83 (312)
T cd08269          23 LVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-------------------   83 (312)
T ss_pred             EEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-------------------
Confidence            47889999999986543 2221   123478999999999999999999999999999762                   


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                                                     .|+|++|++++.+.++++|+++  ..++.+..+++++++++. ..++++
T Consensus        84 -------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~  129 (312)
T cd08269          84 -------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRA  129 (312)
T ss_pred             -------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCC
Confidence                                           2689999999999999999998  232322377889998865 788999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      +++|+|+|+|.+|++++++|+..|++.|+++.+++++.++++++|++.+++.+..+  +.+.+.+.+.+ ++|+++||+|
T Consensus       130 ~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~~~~~~vd~vld~~g  207 (312)
T cd08269         130 GKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--IVERVRELTGGAGADVVIEAVG  207 (312)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcC--HHHHHHHHcCCCCCCEEEECCC
Confidence            99999998899999999999999994488898999999999999998888766554  88888888776 9999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCC-CCCCHHHHHHHHHCCCCCCCCceee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYK-PRTDLPSVVDMYMNKQLELEKFITH  313 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~  313 (341)
                      ....+..++++++++ |+++.+|..... ...+.. ....+++.+.+....... ..+.+++++++++++.+.+..++++
T Consensus       208 ~~~~~~~~~~~l~~~-g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  285 (312)
T cd08269         208 HQWPLDLAGELVAER-GRLVIFGYHQDG-PRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTH  285 (312)
T ss_pred             CHHHHHHHHHHhccC-CEEEEEccCCCC-CcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheee
Confidence            877889999999998 999999865421 111111 123456666554322221 1247889999999998876545678


Q ss_pred             eecCCcHHHHHHHHhcCCc--ceEEE
Q 019414          314 RIPFSEINKAFEYMVKGEG--LRCII  337 (341)
Q Consensus       314 ~~~~~~i~ea~~~~~~~~~--~k~vl  337 (341)
                      .|++++++++++.+.+++.  +|+++
T Consensus       286 ~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         286 EFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             eecHHHHHHHHHHHHhCCCCceEEEe
Confidence            8999999999999988864  68887

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=7.7e-33  Score=251.34  Aligned_cols=285  Identities=27%  Similarity=0.424  Sum_probs=204.9

Q ss_pred             CccccccCCcCcceeeeccCCC--C---CCCccccccceEE---EEEec-CCCCCCCCCCEEEecccCCCCCChhhcCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--P---LFPRIFGHEAAGV---VESVG-EGVSDLEVGDHVLPVFTGECGDCRHCRSDV   71 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~---~~p~i~G~e~~G~---V~~vG-~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~   71 (341)
                      +|++.++++||.|+..+.....  +   .+|.+++.++.|+   +...| ..+..+..||++....              
T Consensus        36 ~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~--------------  101 (347)
T KOG1198|consen   36 LIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVAFL--------------  101 (347)
T ss_pred             EEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEeecc--------------
Confidence            5788999999999776544332  2   3554444444443   33333 2233344455444331              


Q ss_pred             CCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhh
Q 019414           72 SNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV  151 (341)
Q Consensus        72 ~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~  151 (341)
                                                         ..|+|+||+++|+..++++|+++++++||++|.++.|||.++++.
T Consensus       102 -----------------------------------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~  146 (347)
T KOG1198|consen  102 -----------------------------------SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQL  146 (347)
T ss_pred             -----------------------------------CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhc
Confidence                                               237999999999999999999999999999999999999999999


Q ss_pred             c------CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhc
Q 019414          152 A------KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       152 ~------~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .      +.++|++|||+|+ |++|++++|+|+..++ ..+++.+++++.++++++|++.++|+++.+  +.+.+++.++
T Consensus       147 ~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~--~~e~~kk~~~  223 (347)
T KOG1198|consen  147 APGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKDEN--VVELIKKYTG  223 (347)
T ss_pred             cccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCCHH--HHHHHHhhcC
Confidence            9      8999999999976 9999999999999996 555555899999999999999999999866  9999999885


Q ss_pred             CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccc-cceeeecce-----EEEeee---cCCCCCCCHH
Q 019414          225 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTK-PINVLNERT-----LKGTFF---GNYKPRTDLP  294 (341)
Q Consensus       225 ~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~-~~~~~~~~~-----~~g~~~---~~~~~~~~~~  294 (341)
                      ++||+||||+|+. .......++... |+...++..... ...... .....+.+.     +.+...   ......+.++
T Consensus       224 ~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  301 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLK  301 (347)
T ss_pred             CCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHH
Confidence            5999999999984 666777777776 654444432211 111111 000001111     111000   0111224688


Q ss_pred             HHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCC-cceEEEecCC
Q 019414          295 SVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISMED  341 (341)
Q Consensus       295 ~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~-~~k~vl~~~~  341 (341)
                      .+.++++++++  .+.+.+.||++++++|+..+.++. .+|+++.+.+
T Consensus       302 ~l~~~ie~gki--kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~  347 (347)
T KOG1198|consen  302 ALVELIEKGKI--KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV  347 (347)
T ss_pred             HHHHHHHcCcc--cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence            89999999955  555889999999999999998755 4699998753

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=3.3e-32  Score=248.56  Aligned_cols=281  Identities=21%  Similarity=0.320  Sum_probs=228.4

Q ss_pred             CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||++++++|+.|.......  ..+.+|.++|||++|+|+.+|++++.+++||+|++.+.                    
T Consensus        30 ~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------------------   89 (323)
T cd05282          30 LVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG--------------------   89 (323)
T ss_pred             EEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC--------------------
Confidence            47899999999986543222  22356789999999999999999999999999998731                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|++|+.++...++++|+++++.+++.+++.+.+||+++.....+.+|+
T Consensus        90 -----------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~  140 (323)
T cd05282          90 -----------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGD  140 (323)
T ss_pred             -----------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCC
Confidence                                         268999999999999999999999999999999999999988878889999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|||+|+ |.+|++++++|+.+|+ .++++.+++++.+.++++|++.++++.+.+  +.+.+...+.+ ++|++||++|+
T Consensus       141 ~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~  217 (323)
T cd05282         141 WVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKEATGGAGARLALDAVGG  217 (323)
T ss_pred             EEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHHHhcCCCceEEEECCCC
Confidence            9999987 8999999999999999 788888889999999999999998876544  77778888776 99999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceee-ecceEEEeeecCCCC-------CCCHHHHHHHHHCCCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP-------RTDLPSVVDMYMNKQLELE  308 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~i~~~  308 (341)
                       ......+++++++ |+++.+|..... ........+. +++++.+.....+..       ...++++++++.++++.+.
T Consensus       218 -~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~  294 (323)
T cd05282         218 -ESATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP  294 (323)
T ss_pred             -HHHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC
Confidence             5567889999997 999999875543 2222222233 788888776543311       1247778899999977643


Q ss_pred             CceeeeecCCcHHHHHHHHhcCCcc-eEEEe
Q 019414          309 KFITHRIPFSEINKAFEYMVKGEGL-RCIIS  338 (341)
Q Consensus       309 ~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl~  338 (341)
                        +++.|++++++++++.+.+++.. |+|++
T Consensus       295 --~~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         295 --VGAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             --ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence              57889999999999999877654 77763

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=4.2e-32  Score=248.49  Aligned_cols=285  Identities=20%  Similarity=0.251  Sum_probs=222.5

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||+.++|+|+.|........ .+.+|.++|||++|+|+.+|++++.+++||+|+....                     
T Consensus        32 ~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~---------------------   90 (327)
T PRK10754         32 QVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQS---------------------   90 (327)
T ss_pred             EEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCC---------------------
Confidence            478899999999865543322 2346889999999999999999999999999985410                     


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                                                 +.|+|++|+.++.+.++++|+++++++++.++..+.+||+++.....+++|++
T Consensus        91 ---------------------------~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~  143 (327)
T PRK10754         91 ---------------------------ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQ  143 (327)
T ss_pred             ---------------------------CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCE
Confidence                                       12689999999999999999999999999999999999999877788999999


Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      ++|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++....+  +.+.++..+++ ++|++|||+|+ 
T Consensus       144 vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-  219 (327)
T PRK10754        144 FLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYREEN--IVERVKEITGGKKVRVVYDSVGK-  219 (327)
T ss_pred             EEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCCCc--HHHHHHHHcCCCCeEEEEECCcH-
Confidence            999975 9999999999999999 788888999999999999998888776655  77888888886 89999999987 


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecc------eEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCc
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNER------TLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      ..+...+++++++ |+++.+|...... .+..... ..++.      .+.+...........++++++++.++++.+...
T Consensus       220 ~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~  297 (327)
T PRK10754        220 DTWEASLDCLQRR-GLMVSFGNASGPVTGVNLGIL-NQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVA  297 (327)
T ss_pred             HHHHHHHHHhccC-CEEEEEccCCCCCCCcCHHHH-hccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecc
Confidence            6788899999997 9999998654221 1111110 11111      111111000000013456889999998876555


Q ss_pred             eeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          311 ITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +.+.|++++++++++.+.+++. .|+|+.+
T Consensus       298 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  327 (327)
T PRK10754        298 EQQKFPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_pred             cCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            5789999999999999988775 5998853

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=4.6e-31  Score=242.87  Aligned_cols=287  Identities=21%  Similarity=0.322  Sum_probs=220.8

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||++++++|+.|+..........+|.++|||++|+|+.+|++++.+++||+|++.....|+                  
T Consensus        30 ~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~------------------   91 (339)
T cd08249          30 LVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP------------------   91 (339)
T ss_pred             EEEEEEEEcCchheeeeecccccCCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC------------------
Confidence            47899999999996654333223357899999999999999999999999999987533221                  


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCC------
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP------  154 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~------  154 (341)
                                             +....|++++|++++.+.++++|+++++++++.+++.+.|||+++.+..++      
T Consensus        92 -----------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~  148 (339)
T cd08249          92 -----------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPK  148 (339)
T ss_pred             -----------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCC
Confidence                                   011247999999999999999999999999999999999999997766544      


Q ss_pred             ----CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          155 ----ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       155 ----~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                          .++++++|+|+ |.+|++++++|+.+|+ .|+++. ++++.+.++++|++.+++..+.+  +.+.+++.+++++|+
T Consensus       149 ~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~--~~~~l~~~~~~~~d~  224 (339)
T cd08249         149 PSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHDPD--VVEDIRAATGGKLRY  224 (339)
T ss_pred             CCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCCch--HHHHHHHhcCCCeeE
Confidence                78999999997 9999999999999999 677776 56888889999998888876655  777888777778999


Q ss_pred             EEeccCChHHHHHHHHHhcC--CCcEEEEEccCCCCcccccccceeeecceEEEeeecC---CC---CCCCHHHHHHHHH
Q 019414          230 SVECTGNIDNMISAFECVHD--GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN---YK---PRTDLPSVVDMYM  301 (341)
Q Consensus       230 vld~~g~~~~~~~~~~~l~~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~---~~~~~~~~~~~~~  301 (341)
                      +||++|++..+..+++++++  + |+++.++.........   ... +...+.......   ..   ....++.++++++
T Consensus       225 vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (339)
T cd08249         225 ALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEETEPR---KGV-KVKFVLGYTVFGEIPEDREFGEVFWKYLPELLE  299 (339)
T ss_pred             EEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccccCC---CCc-eEEEEEeeeecccccccccchHHHHHHHHHHHH
Confidence            99999876789999999999  8 9999998654322111   001 111111111110   11   1134677889999


Q ss_pred             CCCCCCCCceeeeec--CCcHHHHHHHHhcCC-c-ceEEEec
Q 019414          302 NKQLELEKFITHRIP--FSEINKAFEYMVKGE-G-LRCIISM  339 (341)
Q Consensus       302 ~~~i~~~~~~~~~~~--~~~i~ea~~~~~~~~-~-~k~vl~~  339 (341)
                      ++++.+.+  ...++  ++++++|++.+.+++ . .|+|+++
T Consensus       300 ~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         300 EGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             cCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            99887653  34566  999999999998887 5 4988864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=1.6e-31  Score=244.85  Aligned_cols=281  Identities=24%  Similarity=0.322  Sum_probs=222.5

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||+.++++|+.|+.......  ...+|.++|||++|+|+.+|++++++++||+|++..                     
T Consensus        34 ~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~---------------------   92 (329)
T cd08250          34 LVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMS---------------------   92 (329)
T ss_pred             EEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCCCCCCCEEEEec---------------------
Confidence            478999999999865432222  245788999999999999999999999999999762                     


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|++|+.++.+.++++|++  ..+++.+++++.|||+++.+..++++|+
T Consensus        93 -----------------------------~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~  141 (329)
T cd08250          93 -----------------------------FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGE  141 (329)
T ss_pred             -----------------------------CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCC
Confidence                                         269999999999999999997  3567889999999999988878899999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|+|+|+ |.+|++++++|+..|+ .|+++.+++++.+.++++|++.+++..+.+  +.+.+....++++|++||++|+ 
T Consensus       142 ~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~~~~~~vd~v~~~~g~-  217 (329)
T cd08250         142 TVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKTED--LGEVLKKEYPKGVDVVYESVGG-  217 (329)
T ss_pred             EEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCCcc--HHHHHHHhcCCCCeEEEECCcH-
Confidence            9999985 9999999999999999 788888899999999999998888766544  6666666655589999999986 


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcc---------cccccceeeecceEEEeeecCCC--CCCCHHHHHHHHHCCCCC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAV---------FMTKPINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~i~  306 (341)
                      ..+..++++++++ |+++.+|.......         ..+....+.+++++.+.......  ..+.++++++++.++.+.
T Consensus       218 ~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  296 (329)
T cd08250         218 EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLV  296 (329)
T ss_pred             HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCee
Confidence            7889999999997 99999986543210         11112234567777776543211  113467788999999877


Q ss_pred             CCCceeeeecCCcHHHHHHHHhcCCcc-eEEEe
Q 019414          307 LEKFITHRIPFSEINKAFEYMVKGEGL-RCIIS  338 (341)
Q Consensus       307 ~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl~  338 (341)
                      +.....+.++++++++|++.+.+++.. |+|++
T Consensus       297 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         297 CEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             eeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            643345679999999999999887654 87764

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.98  E-value=6e-31  Score=224.93  Aligned_cols=282  Identities=17%  Similarity=0.220  Sum_probs=227.7

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEec--CCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVG--EGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||+.+.+++|.++.++.-...--.|.-+|...+|-++...  ++...|++||.|+..                      
T Consensus        43 Ll~~~ylS~DPymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----------------------  100 (340)
T COG2130          43 LLRTLYLSLDPYMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----------------------  100 (340)
T ss_pred             EEEEEEeccCHHHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec----------------------
Confidence            68999999999887765332221236667776666444433  457789999999977                      


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchh--hhhccccchhhhhhhhhhcCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~--aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                                                    .+|+||..++.+.+.++.++.-...  ...|..+..|||.+|.+.+++++
T Consensus       101 ------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~  150 (340)
T COG2130         101 ------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKA  150 (340)
T ss_pred             ------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCC
Confidence                                          3899999999999999986543222  24577789999999999999999


Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      |++|+|-++ |++|..+.||||..|+ +||.+..++||.+++++ +|.+.++||...+  +.+.+.+.+++|+|+.||++
T Consensus       151 GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~~~~L~~a~P~GIDvyfeNV  227 (340)
T COG2130         151 GETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQALKEACPKGIDVYFENV  227 (340)
T ss_pred             CCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--HHHHHHHHCCCCeEEEEEcC
Confidence            999999986 9999999999999999 99999999999999988 9999999999887  99999999999999999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcc--cc----cccceeeecceEEEeeecCC-C--CCCCHHHHHHHHHCCCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FM----TKPINVLNERTLKGTFFGNY-K--PRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~----~~~~~~~~~~~~~g~~~~~~-~--~~~~~~~~~~~~~~~~i  305 (341)
                      |+ +.++..+..|+.. +|+..||..+.-..  .+    ..+..+.+.+++.|+...+. .  +.+..+++.+|+++|+|
T Consensus       228 Gg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi  305 (340)
T COG2130         228 GG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKI  305 (340)
T ss_pred             Cc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCce
Confidence            98 8999999999998 99999996533111  11    11233557889999887332 1  12467889999999999


Q ss_pred             CCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          306 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       306 ~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      +...  +-.-.|+.+|+||.-|.+++. +|.|+++.+
T Consensus       306 ~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         306 QYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             eeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            8874  344569999999999999997 499998764

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=99.98  E-value=8.3e-31  Score=240.33  Aligned_cols=284  Identities=18%  Similarity=0.273  Sum_probs=223.6

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||+.++++|+.|........  ...+|.++|||++|+|+++|++++++++||+|+....                    
T Consensus        32 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------   91 (334)
T PTZ00354         32 LIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLP--------------------   91 (334)
T ss_pred             EEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEecC--------------------
Confidence            478899999998855532211  2345679999999999999999999999999986521                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   +|++++|++++.+.++++|++++..+++.+++++.+||+++.+...+++|+
T Consensus        92 -----------------------------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~  142 (334)
T PTZ00354         92 -----------------------------GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQ  142 (334)
T ss_pred             -----------------------------CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence                                         268999999999999999999999999999999999999988878899999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|+|+|+ |++|++++++|+..|+ .++.+.+++++.+.++++|++.++++...+ .+.+.++..+++ ++|++||++++
T Consensus       143 ~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~  220 (334)
T PTZ00354        143 SVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRYPDEE-GFAPKVKKLTGEKGVNLVLDCVGG  220 (334)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCChh-HHHHHHHHHhCCCCceEEEECCch
Confidence            9999986 9999999999999999 666677899999999999998888775432 266677777765 89999999976


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcc--cccccceeeecceEEEeeecCCCCC-------CCHHHHHHHHHCCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPR-------TDLPSVVDMYMNKQLEL  307 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~i~~  307 (341)
                       ..+..++++++++ |+++.++.......  +.. ...+.++.++.++........       ..+++++++++++.+.+
T Consensus       221 -~~~~~~~~~l~~~-g~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  297 (334)
T PTZ00354        221 -SYLSETAEVLAVD-GKWIVYGFMGGAKVEKFNL-LPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP  297 (334)
T ss_pred             -HHHHHHHHHhccC-CeEEEEecCCCCcccccCH-HHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC
Confidence             7889999999998 99999985432211  221 112335556666554331110       12467788888887654


Q ss_pred             CCceeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          308 EKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       308 ~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                        ++++.+++++++++++.+.+++. .|+|+++.
T Consensus       298 --~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~  329 (334)
T PTZ00354        298 --IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN  329 (334)
T ss_pred             --ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence              35788999999999999987765 59998775

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=6.4e-31  Score=238.20  Aligned_cols=270  Identities=24%  Similarity=0.305  Sum_probs=215.0

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||+.++++|+.|.....   ....|.++|||++|+|+++|++++.|++||+|+...                       
T Consensus        30 ~v~v~~~~i~~~d~~~~~---~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-----------------------   83 (305)
T cd08270          30 LVRVAAISLNRGELKFAA---ERPDGAVPGWDAAGVVERAAADGSGPAVGARVVGLG-----------------------   83 (305)
T ss_pred             EEEEEEEecCHHHHHhhc---cCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec-----------------------
Confidence            478999999999865432   222367899999999999999999999999998752                       


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                                                ..|+|++|+.++.+.++++|+++++++++++++.+.|||+++...... +|+++
T Consensus        84 --------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~v  136 (305)
T cd08270          84 --------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRV  136 (305)
T ss_pred             --------------------------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEE
Confidence                                      126999999999999999999999999999999999999997665545 59999


Q ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      +|+|+ |++|++++++|+..|+ +|+.+.+++++.+.++++|++.+++..+          +..++++|+++|++|+ ..
T Consensus       137 li~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~~~~~d~vl~~~g~-~~  204 (305)
T cd08270         137 LVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----------ELSGAPVDLVVDSVGG-PQ  204 (305)
T ss_pred             EEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc----------cccCCCceEEEECCCc-HH
Confidence            99987 9999999999999999 8899889999999999999876553322          1122479999999987 57


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCcccccccceee---ecceEEEeeecC-CCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL---NERTLKGTFFGN-YKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~---~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      +..++++++++ |+++.+|..... ........+.   ++.++.++.... ......++.++++++++++.+.  +.+.+
T Consensus       205 ~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~  280 (305)
T cd08270         205 LARALELLAPG-GTVVSVGSSSGE-PAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRG  280 (305)
T ss_pred             HHHHHHHhcCC-CEEEEEeccCCC-cccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEE
Confidence            89999999998 999999865422 1111121222   477777776543 1112457888999999988753  66899


Q ss_pred             cCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          316 PFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++++++++++.+.+++. .|+|+++
T Consensus       281 ~~~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         281 SWTEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             cHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999999999987775 4888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=8.7e-31  Score=238.57  Aligned_cols=282  Identities=23%  Similarity=0.343  Sum_probs=219.8

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||++++++|+.|+....... ....|.++|||++|+|+++|.  ..+++||+|++....-              +    
T Consensus        31 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~--------------~----   90 (320)
T cd08243          31 LIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGM--------------G----   90 (320)
T ss_pred             EEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCC--------------C----
Confidence            478899999999865443322 234578999999999999995  5799999999773100              0    


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                                               ....|+|++|+.++...++++|+++++++++.+++++.+||+++.+...+++|++
T Consensus        91 -------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~  145 (320)
T cd08243          91 -------------------------RTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDT  145 (320)
T ss_pred             -------------------------CCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCE
Confidence                                     0013699999999999999999999999999999999999999888888999999


Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      |||+|+ |++|++++++|+..|+ +|+++.+++++.+.++++|++.+++. ..+  +.+.++.. ++++|+++|++|+ .
T Consensus       146 vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~--~~~~i~~~-~~~~d~vl~~~~~-~  219 (320)
T cd08243         146 LLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-DGA--IAEQLRAA-PGGFDKVLELVGT-A  219 (320)
T ss_pred             EEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-Ccc--HHHHHHHh-CCCceEEEECCCh-H
Confidence            999987 9999999999999999 78988899999999999999887754 333  67777777 5589999999987 6


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCccc----ccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVF----MTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      .++.++++++++ |+++.+|........    ......+.+++++.+...... ....++.++++++++.+.+.  +++.
T Consensus       220 ~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~  295 (320)
T cd08243         220 TLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDV-PQTPLQELFDFVAAGHLDIP--PSKV  295 (320)
T ss_pred             HHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhh-hHHHHHHHHHHHHCCceecc--cccE
Confidence            889999999998 999999864322111    111111245666665543221 11357788899999977643  5688


Q ss_pred             ecCCcHHHHHHHHhcCCcc-eEEE
Q 019414          315 IPFSEINKAFEYMVKGEGL-RCII  337 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~~~-k~vl  337 (341)
                      ++++++++|++.+.+++.. |+|+
T Consensus       296 ~~l~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         296 FTFDEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             EcHHHHHHHHHHHHhCCCCCcEEe
Confidence            9999999999999877754 7665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=99.97  E-value=3.3e-30  Score=235.57  Aligned_cols=284  Identities=18%  Similarity=0.226  Sum_probs=212.8

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||+.++++|+.|........  ...+|.++|||++|+|+++  +++.+++||+|++....                   
T Consensus        31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~~-------------------   89 (325)
T cd05280          31 LIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYD-------------------   89 (325)
T ss_pred             EEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCCCCCEEEEcccc-------------------
Confidence            478999999999966543322  2345789999999999998  56789999999976310                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcC--CC-
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK--PE-  155 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~--~~-  155 (341)
                                    +          +....|+|++|+.++++.++++|+++++++++.+++.+.+||+++....+  +. 
T Consensus        90 --------------~----------g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  145 (325)
T cd05280          90 --------------L----------GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTP  145 (325)
T ss_pred             --------------c----------CCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCC
Confidence                          0          01123699999999999999999999999999999999999998765443  35 


Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .+++|+|+|+ |.+|++++++|+.+|+ .|+++++++++++.++++|++.+++..+.   .....+....+++|++||++
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~d~vi~~~  221 (325)
T cd05280         146 EDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDREDL---LDESKKPLLKARWAGAIDTV  221 (325)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchhH---HHHHHHHhcCCCccEEEECC
Confidence            3579999997 9999999999999999 78989899999999999999988876542   11222333334899999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCC---CCHHHHHHHHHCCCCCCCCc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPR---TDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~  310 (341)
                      |+ ..+..++++++++ |+++.+|....... .... ..+.+++++.+.......+.   ..++.+.+++..+..   +.
T Consensus       222 ~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  295 (325)
T cd05280         222 GG-DVLANLLKQTKYG-GVVASCGNAAGPEL-TTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL---EI  295 (325)
T ss_pred             ch-HHHHHHHHhhcCC-CEEEEEecCCCCcc-ccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc---cc
Confidence            87 6889999999998 99999987543221 2222 22368888887765432210   123334444455522   23


Q ss_pred             eeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          311 ITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++..|++++++++++.+.+++. +|+|+++
T Consensus       296 ~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         296 VVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             eeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            6789999999999999988876 4888764

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=4.9e-30  Score=233.01  Aligned_cols=282  Identities=23%  Similarity=0.287  Sum_probs=224.6

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +|++.++++|+.|...........+|.++|||++|+|+.+|++++++++||+|++..                       
T Consensus        30 ~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-----------------------   86 (320)
T cd05286          30 LVRNTAIGVNFIDTYFRSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG-----------------------   86 (320)
T ss_pred             EEEEEEeecCHHHHHHhcCCCCCCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-----------------------
Confidence            367888999998865543322334678999999999999999999999999999762                       


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                                                ..|++++|+.++.+.++++|++++..+++.++..+.++++++.+..++.+|++|
T Consensus        87 --------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~v  140 (320)
T cd05286          87 --------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTV  140 (320)
T ss_pred             --------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEE
Confidence                                      026899999999999999999999999999999999999998888899999999


Q ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChH
Q 019414          161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID  238 (341)
Q Consensus       161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~  238 (341)
                      +|+|+ |++|++++++++.+|+ .|+++..++++.+.++++|++.+++..+.+  +.+.+...+.+ ++|++|||+++ .
T Consensus       141 lI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~  216 (320)
T cd05286         141 LVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDED--FVERVREITGGRGVDVVYDGVGK-D  216 (320)
T ss_pred             EEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCchh--HHHHHHHHcCCCCeeEEEECCCc-H
Confidence            99995 9999999999999999 788888999999999999998888766544  77778877766 89999999987 6


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCccccccccee-eecceEEEeeecCCCCC-----CCHHHHHHHHHCCCCCCCCcee
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR-----TDLPSVVDMYMNKQLELEKFIT  312 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~  312 (341)
                      ....++++++++ |+++.+|..... ...+....+ .+++++.+.........     ..++.+++++.++.+.+.  .+
T Consensus       217 ~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~  292 (320)
T cd05286         217 TFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IG  292 (320)
T ss_pred             hHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--cc
Confidence            888999999998 999999865432 111111112 56666654433222111     235568888888877654  56


Q ss_pred             eeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          313 HRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       313 ~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +.|++++++++++.+.+++. .|+++++
T Consensus       293 ~~~~~~~~~~a~~~~~~~~~~~~vv~~~  320 (320)
T cd05286         293 KRYPLADAAQAHRDLESRKTTGKLLLIP  320 (320)
T ss_pred             ceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            88999999999999987775 4888754

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=99.97  E-value=5.3e-30  Score=234.43  Aligned_cols=285  Identities=18%  Similarity=0.199  Sum_probs=211.1

Q ss_pred             CccccccCCcCcceeeec--cCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGF--QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~--~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||++++++|+.|.....  ......+|.++|||++|+|+++|  ++++++||+|++.+..                   
T Consensus        31 ~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~-------------------   89 (326)
T cd08289          31 LIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYD-------------------   89 (326)
T ss_pred             EEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccc-------------------
Confidence            478999999999854432  12223468899999999999954  5789999999976310                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhc--C-CC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA--K-PE  155 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~--~-~~  155 (341)
                                    .+          ....|+|++|+.++++.++++|+++++++++.+++.+.|||+++....  . ..
T Consensus        90 --------------~~----------~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~  145 (326)
T cd08289          90 --------------LG----------VSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTP  145 (326)
T ss_pred             --------------cC----------CCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCC
Confidence                          00          012379999999999999999999999999999999999998865432  3 34


Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      ++++|||+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++..+.   ..+.++..+++++|++||++
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~~~~~~d~vld~~  221 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREEL---QEESIKPLEKQRWAGAVDPV  221 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchhH---HHHHHHhhccCCcCEEEECC
Confidence            5789999987 9999999999999999 78998899999999999999888876543   23445555445899999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC---CCCc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE---LEKF  310 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~  310 (341)
                      |+ ..++.++++++++ |+++.+|..... ..+.. ...+.+++++.+...... +.....++++.+.+ .+.   ....
T Consensus       222 g~-~~~~~~~~~l~~~-G~~i~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~  296 (326)
T cd08289         222 GG-KTLAYLLSTLQYG-GSVAVSGLTGGG-EVETTVFPFILRGVNLLGIDSVEC-PMELRRRIWRRLAT-DLKPTQLLNE  296 (326)
T ss_pred             cH-HHHHHHHHHhhcC-CEEEEEeecCCC-CCCcchhhhhhccceEEEEEeEec-CchHHHHHHHHHHh-hcCccccccc
Confidence            87 7889999999998 999999975322 12211 222367888887653211 00123334443332 222   1223


Q ss_pred             eeeeecCCcHHHHHHHHhcCCcc-eEEEec
Q 019414          311 ITHRIPFSEINKAFEYMVKGEGL-RCIISM  339 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~~-k~vl~~  339 (341)
                      +++.++++++++|++.+.+++.. |+|+++
T Consensus       297 ~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         297 IKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             cceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence            57899999999999999888764 888763

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=8e-30  Score=230.21  Aligned_cols=281  Identities=23%  Similarity=0.356  Sum_probs=219.3

Q ss_pred             CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|+......  ..+.+|.++|+|++|+|+++|++++++++||+|++....                   
T Consensus        11 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-------------------   71 (303)
T cd08251          11 RIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE-------------------   71 (303)
T ss_pred             EEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC-------------------
Confidence            47889999999986654332  223568899999999999999999999999999976310                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                  ..|+|++|+.++.+.++++|++++++++++++..+.+||+++ +...+++|+
T Consensus        72 ----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~  122 (303)
T cd08251          72 ----------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGE  122 (303)
T ss_pred             ----------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCC
Confidence                                        136999999999999999999999999999999999999996 578899999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +++|+|+ |.+|++++|+++.+|+ +++++.+++++.+.++++|++.+++....+  +.+.+...+++ ++|+++|++++
T Consensus       123 ~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~~~  199 (303)
T cd08251         123 HILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGVDVVINTLSG  199 (303)
T ss_pred             EEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCceEEEECCcH
Confidence            9999965 9999999999999999 899998999999999999998888876655  77778888776 89999999965


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecC---CCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN---YKP---RTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~---~~~~~~~~~~~~~~~i~~~~~  310 (341)
                       ......+++++++ |+++.++..............+.++..+....+..   ..+   .+.+.++++++.++.+.+  +
T Consensus       200 -~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~  275 (303)
T cd08251         200 -EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRP--T  275 (303)
T ss_pred             -HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccC--C
Confidence             6888899999998 99999876432211111111122233222221110   111   124667888888887654  3


Q ss_pred             eeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414          311 ITHRIPFSEINKAFEYMVKGEGL-RCI  336 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~~-k~v  336 (341)
                      .++.|++++++++++.+.+++.. |++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~iv  302 (303)
T cd08251         276 VSRIFPFDDIGEAYRYLSDRENIGKVV  302 (303)
T ss_pred             CceEEcHHHHHHHHHHHHhCCCcceEe
Confidence            56889999999999999877654 665

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.97  E-value=1.7e-29  Score=231.98  Aligned_cols=283  Identities=19%  Similarity=0.214  Sum_probs=221.0

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||+.++++|+.|+........ ..+|.++|||++|+|+++|+++..+++||+|++....                    
T Consensus        34 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--------------------   93 (336)
T cd08252          34 LVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDI--------------------   93 (336)
T ss_pred             EEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCC--------------------
Confidence            4788999999998554322221 2357799999999999999999999999999965210                    


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC---
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER---  156 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~---  156 (341)
                                                ...|+|++|+.++.+.++++|++++.++++.+++.+.+||+++.+...+.+   
T Consensus        94 --------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~  147 (336)
T cd08252          94 --------------------------TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAE  147 (336)
T ss_pred             --------------------------CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcC
Confidence                                      013699999999999999999999999999999999999999878788887   


Q ss_pred             --CCEEEEECC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          157 --GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       157 --g~~vlI~G~-g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                        |++|+|+|+ |++|++++++|+.+| + +|+++++++++.+.++++|++.+++... +  +.+.++...++++|++||
T Consensus       148 ~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~--~~~~i~~~~~~~~d~vl~  223 (336)
T cd08252         148 NEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ-D--LAEQLEALGIEPVDYIFC  223 (336)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc-c--HHHHHHhhCCCCCCEEEE
Confidence              999999985 999999999999999 7 8999989999999999999988887764 3  666666544448999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC--CC-------CCCHHHHHHHHHCC
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY--KP-------RTDLPSVVDMYMNK  303 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~-------~~~~~~~~~~~~~~  303 (341)
                      ++|+...+..++++++++ |+++.+|...  ..++.. ....+++++.+......  ..       ...++.+++++.++
T Consensus       224 ~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (336)
T cd08252         224 LTDTDQHWDAMAELIAPQ-GHICLIVDPQ--EPLDLG-PLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAG  299 (336)
T ss_pred             ccCcHHHHHHHHHHhcCC-CEEEEecCCC--Ccccch-hhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCC
Confidence            998777899999999998 9999998642  122221 11256777766544321  00       12367788999999


Q ss_pred             CCCCCCc-eeeeecCCcHHHHHHHHhcCCcc-eEEE
Q 019414          304 QLELEKF-ITHRIPFSEINKAFEYMVKGEGL-RCII  337 (341)
Q Consensus       304 ~i~~~~~-~~~~~~~~~i~ea~~~~~~~~~~-k~vl  337 (341)
                      .+.+... ..+.++++++++|++.+.+++.. |+++
T Consensus       300 ~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  335 (336)
T cd08252         300 KLKTTLTETLGPINAENLREAHALLESGKTIGKIVL  335 (336)
T ss_pred             CEecceeeeecCCCHHHHHHHHHHHHcCCccceEEe
Confidence            7764321 12457999999999999887754 7775

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=8.8e-30  Score=228.12  Aligned_cols=278  Identities=22%  Similarity=0.308  Sum_probs=220.9

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      +||+.++++|+.|+..... ..+.+|.++|||++|+|+++|++++++++||+|++..                       
T Consensus         4 ~i~v~~~~~~~~d~~~~~g-~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-----------------------   59 (293)
T cd05195           4 EVEVKAAGLNFRDVLVALG-LLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-----------------------   59 (293)
T ss_pred             EEEEEEEecCHHHHHHHhC-CCCCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-----------------------
Confidence            5789999999999665432 2345688999999999999999999999999999762                       


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                                                 .|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+++|++|
T Consensus        60 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v  112 (293)
T cd05195          60 ---------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESV  112 (293)
T ss_pred             ---------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEE
Confidence                                       26999999999999999999999999999999999999998788899999999


Q ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC--CceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g--~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|+|+ |.+|++++++|+..|+ +++++.+++++.+.+++.+  ++.+++....+  +.+.+++.+.+ ++|+++|++|+
T Consensus       113 lv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~  189 (293)
T cd05195         113 LIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLNSLSG  189 (293)
T ss_pred             EEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEeCCCc
Confidence            99975 9999999999999999 7888888999999998888  67777765544  77788888766 89999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCC---C---CCCHHHHHHHHHCCCCCCCCc
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK---P---RTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~---~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      . .++.++++++++ |+++.++..............+.+++.+....+....   +   .+.++.+++++.++++.  +.
T Consensus       190 ~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  265 (293)
T cd05195         190 E-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PL  265 (293)
T ss_pred             h-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cC
Confidence            5 889999999997 9999998654321111111223344555444322110   0   12467788889898765  34


Q ss_pred             eeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414          311 ITHRIPFSEINKAFEYMVKGEGL-RCI  336 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~~-k~v  336 (341)
                      .+..+++++++++++.+.+++.. |++
T Consensus       266 ~~~~~~~~~~~~a~~~~~~~~~~~~iv  292 (293)
T cd05195         266 PPTVVPSASEIDAFRLMQSGKHIGKVV  292 (293)
T ss_pred             CCeeechhhHHHHHHHHhcCCCCceec
Confidence            56789999999999999877654 665

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=7.7e-30  Score=228.26  Aligned_cols=277  Identities=22%  Similarity=0.335  Sum_probs=219.4

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      .||+.++++|+.|+..... ..+ .|.++|||++|+|+++|++++++++||+|++..                       
T Consensus         1 ~i~v~~~~i~~~d~~~~~g-~~~-~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------   55 (288)
T smart00829        1 EVEVRAAGLNFRDVLIALG-LLP-GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------   55 (288)
T ss_pred             CeeEEEEecCHHHHHHhcC-CCC-CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence            3789999999999665432 222 367899999999999999999999999999762                       


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                                                 .|+|++|+.++.+.++++|+++++++++.+++.+.++|+++.+...+.+|++|
T Consensus        56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v  108 (288)
T smart00829       56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV  108 (288)
T ss_pred             ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence                                       26899999999999999999999999999999999999998788899999999


Q ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--ceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|+|+ |.+|++++++|+..|+ +|+++.+++++.+.++++|+  +.++++.+.+  +.+.+...+++ ++|.++|++++
T Consensus       109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~  185 (288)
T smart00829      109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG  185 (288)
T ss_pred             EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH
Confidence            99985 9999999999999999 78999899999999999998  6777766554  77777777776 89999999985


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC--C---CCCCHHHHHHHHHCCCCCCCCce
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY--K---PRTDLPSVVDMYMNKQLELEKFI  311 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~---~~~~~~~~~~~~~~~~i~~~~~~  311 (341)
                       ..++.++++++++ |+++.+|..............+.+++++.+..+...  .   ..+.++.+++++.++++.+.  .
T Consensus       186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  261 (288)
T smart00829      186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P  261 (288)
T ss_pred             -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence             7888999999997 999999864321111111112344555555433211  0   01246678888888877653  4


Q ss_pred             eeeecCCcHHHHHHHHhcCCc-ceEE
Q 019414          312 THRIPFSEINKAFEYMVKGEG-LRCI  336 (341)
Q Consensus       312 ~~~~~~~~i~ea~~~~~~~~~-~k~v  336 (341)
                      ++.|++++++++++.+..++. .|++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~iv  287 (288)
T smart00829      262 VTVFPISDVEDAFRYMQQGKHIGKVV  287 (288)
T ss_pred             ceEEcHHHHHHHHHHHhcCCCcceEe
Confidence            578999999999999988765 3655

Enoylreductase in Polyketide synthases.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.97  E-value=4.8e-30  Score=235.00  Aligned_cols=275  Identities=20%  Similarity=0.262  Sum_probs=215.2

Q ss_pred             CccccccCCcCcceeeeccC--CC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||+.++++|+.|..+....  ..  ...+.++|+|++|+|+++|++  ++++||+|+..                    
T Consensus        36 ~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~--------------------   93 (329)
T cd05288          36 LVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF--------------------   93 (329)
T ss_pred             EEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc--------------------
Confidence            57899999999664332221  11  123568999999999999964  79999999965                    


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeec-CceEECCCCCC--chhhhh-ccccchhhhhhhhhhc
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCVAKINPLAP--LDKVCI-LSCGVSTGLGATLNVA  152 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~-~~~~~lp~~~~--~~~aa~-l~~~~~ta~~~l~~~~  152 (341)
                                                      ++|++|+.++. +.++++|++++  +.++++ +++++.|||+++....
T Consensus        94 --------------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~  141 (329)
T cd05288          94 --------------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIG  141 (329)
T ss_pred             --------------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhcc
Confidence                                            48999999999 99999999995  445555 8999999999988878


Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      .+.++++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.+++ +|++.++++.+.+  +.+.+...+++++|++
T Consensus       142 ~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~v~~~~~~~~d~v  218 (329)
T cd05288         142 KPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKTPD--LAEALKEAAPDGIDVY  218 (329)
T ss_pred             CCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCChh--HHHHHHHhccCCceEE
Confidence            8999999999985 9999999999999999 88989899999999988 9998888877654  7777777776689999


Q ss_pred             EeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccc-----cccceeeecceEEEeeecCCCC--CCCHHHHHHHHHCC
Q 019414          231 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM-----TKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNK  303 (341)
Q Consensus       231 ld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~  303 (341)
                      ||++|+ ..+..++++++++ |+++.+|.........     .....+.+++++.+........  .+.+.++++++.++
T Consensus       219 i~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  296 (329)
T cd05288         219 FDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEG  296 (329)
T ss_pred             EEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCC
Confidence            999987 6889999999998 9999998654322111     0122345777777765433211  13467788999999


Q ss_pred             CCCCCCceeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414          304 QLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI  336 (341)
Q Consensus       304 ~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~v  336 (341)
                      .+.+.+  ...+++++++++++.+.+++.. |++
T Consensus       297 ~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvv  328 (329)
T cd05288         297 KLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLV  328 (329)
T ss_pred             Cccccc--cccccHHHHHHHHHHHhcCCCcccee
Confidence            887653  3558999999999999877654 665

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=99.97  E-value=2.3e-29  Score=230.01  Aligned_cols=282  Identities=17%  Similarity=0.193  Sum_probs=212.0

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||++++++|+.|+.......  ...+|.++|||++|+|+.  +++..|++||+|++.....                  
T Consensus        30 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~------------------   89 (323)
T TIGR02823        30 LIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGL------------------   89 (323)
T ss_pred             EEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCCC------------------
Confidence            478999999999865432222  134688999999999998  5678899999999763100                  


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhh--cCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPER  156 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~  156 (341)
                                     +          ....|++++|+.++.+.++++|+++++++++.++..+.+|+.++...  ..+.+
T Consensus        90 ---------------~----------~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~  144 (323)
T TIGR02823        90 ---------------G----------VSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTP  144 (323)
T ss_pred             ---------------C----------CCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCC
Confidence                           0          00136999999999999999999999999999999999998876443  34889


Q ss_pred             CC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          157 GS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       157 g~-~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      ++ +|+|+|+ |.+|++++++|+.+|+ +++++..++++++.++++|++.+++..+.+    ..++....+++|+++||+
T Consensus       145 ~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~d~vld~~  219 (323)
T TIGR02823       145 EDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDREDLS----PPGKPLEKERWAGAVDTV  219 (323)
T ss_pred             CCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEccccHH----HHHHHhcCCCceEEEECc
Confidence            98 9999997 9999999999999999 677777888888999999998888765432    234444444799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      |+ +.+.+++++++++ |+++.+|..... ....+ ...+.+++++.+........   ...++.+.+++..+.+..  .
T Consensus       220 g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  294 (323)
T TIGR02823       220 GG-HTLANVLAQLKYG-GAVAACGLAGGP-DLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES--I  294 (323)
T ss_pred             cH-HHHHHHHHHhCCC-CEEEEEcccCCC-CccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC--c
Confidence            87 5788999999998 999999965322 12221 12236778887765432111   012455666666776543  2


Q ss_pred             eeeeecCCcHHHHHHHHhcCCcc-eEEEe
Q 019414          311 ITHRIPFSEINKAFEYMVKGEGL-RCIIS  338 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~~-k~vl~  338 (341)
                       .+.++++++++|++.+.+++.. |+|++
T Consensus       295 -~~~~~l~~~~~a~~~~~~~~~~~k~vv~  322 (323)
T TIGR02823       295 -TREITLEELPEALEQILAGQHRGRTVVD  322 (323)
T ss_pred             -eeeecHHHHHHHHHHHhCCCccceEEEe
Confidence             4689999999999999888765 88875

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.97  E-value=4.2e-29  Score=227.45  Aligned_cols=287  Identities=26%  Similarity=0.365  Sum_probs=224.6

Q ss_pred             CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|+++++++|+.|.......  ..+.+|.++|||++|+|+++|+++++|++||+|++.+..                   
T Consensus        31 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~-------------------   91 (325)
T cd08253          31 LVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG-------------------   91 (325)
T ss_pred             EEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccc-------------------
Confidence            36888999999986654322  234568899999999999999999999999999987310                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                      +         ....|++++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.+|+
T Consensus        92 ----------------~---------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~  146 (325)
T cd08253          92 ----------------W---------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGE  146 (325)
T ss_pred             ----------------c---------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCC
Confidence                            0         001368999999999999999999999999999999999999988878999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +++|+|+ |++|++++++++..|. .|+++++++++.+.++++|++.+++....+  +.+.+.+.+.+ ++|+++|+.+.
T Consensus       147 ~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~  223 (325)
T cd08253         147 TVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRAED--LADRILAATAGQGVDVIIEVLAN  223 (325)
T ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcC--HHHHHHHHcCCCceEEEEECCch
Confidence            9999986 9999999999999998 888888999999999999998888776555  77777777665 89999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCceee
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKFITH  313 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~  313 (341)
                       ...+..+++++++ |+++.++............ .+.++..+.+.......+   .+.++.+.+++.++.+...  .++
T Consensus       224 -~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~  298 (325)
T cd08253         224 -VNLAKDLDVLAPG-GRIVVYGSGGLRGTIPINP-LMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPV--IAR  298 (325)
T ss_pred             -HHHHHHHHhhCCC-CEEEEEeecCCcCCCChhH-HHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCc--ccc
Confidence             5678889999997 9999998644222222211 134566666554332211   1235556677778866543  568


Q ss_pred             eecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          314 RIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       314 ~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      .+++++++++++.+.+++. .|+++++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         299 EYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             EEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            8999999999999987765 4888753

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=6.9e-29  Score=221.95  Aligned_cols=247  Identities=27%  Similarity=0.416  Sum_probs=195.8

Q ss_pred             CCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccc
Q 019414           24 LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVN  103 (341)
Q Consensus        24 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~  103 (341)
                      .+|.++|||++|+|+++|++++++++||+|+..                                               
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------------------------   51 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-----------------------------------------------   51 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence            478999999999999999999999999999976                                               


Q ss_pred             cccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Q 019414          104 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR  183 (341)
Q Consensus       104 ~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~  183 (341)
                           ++|++|+.++.+.++++|+++++++++.+ +++.+||+++ ...++++|++++|+|+|.+|++++++|+.+|.++
T Consensus        52 -----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~  124 (277)
T cd08255          52 -----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE  124 (277)
T ss_pred             -----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence                 36899999999999999999999998888 7899999986 4788999999999988999999999999999944


Q ss_pred             EEEEcCChhhHHHHHHcC-CceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC
Q 019414          184 IIGVDRSSKRFEEAKKFG-VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  262 (341)
Q Consensus       184 vv~v~~~~~~~~~~~~~g-~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  262 (341)
                      |+++++++++.+.++++| ++.+++....         ...+.++|++||+++....++..+++++++ |+++.+|....
T Consensus       125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~  194 (277)
T cd08255         125 VVGVDPDAARRELAEALGPADPVAADTAD---------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGL  194 (277)
T ss_pred             EEEECCCHHHHHHHHHcCCCccccccchh---------hhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCC
Confidence            999999999999999999 4544433210         112238999999998777889999999998 99999986544


Q ss_pred             CcccccccceeeecceEEEeeecCC---------CCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCC--
Q 019414          263 DAVFMTKPINVLNERTLKGTFFGNY---------KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--  331 (341)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~--  331 (341)
                      . ..........+.+++.+......         ...+.++++++++.++.+..  .+.+.+++++++++++.+.+++  
T Consensus       195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~  271 (277)
T cd08255         195 K-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLLFEDPPE  271 (277)
T ss_pred             C-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHHHcCCcc
Confidence            3 21111112224445555443211         11256889999999997654  3568899999999999998873  


Q ss_pred             cceEEE
Q 019414          332 GLRCII  337 (341)
Q Consensus       332 ~~k~vl  337 (341)
                      .+|+++
T Consensus       272 ~~k~~~  277 (277)
T cd08255         272 CLKVVL  277 (277)
T ss_pred             ceeeeC
Confidence            457764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=9.8e-29  Score=228.57  Aligned_cols=290  Identities=19%  Similarity=0.256  Sum_probs=209.7

Q ss_pred             CccccccCCcCcceeeeccCC-CCC-CCccccccceEEEEEecCCCC-CCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPL-FPRIFGHEAAGVVESVGEGVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~-~p~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      +|++.++++|+.|........ ... .|.++|+|++|+|+++|++++ .|++||+|++.....|+               
T Consensus        32 ~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~---------------   96 (352)
T cd08247          32 VVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYG---------------   96 (352)
T ss_pred             EEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCCC---------------
Confidence            478899999999965532211 112 378999999999999999998 89999999976321110               


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecC----ceEECCCCCCchhhhhccccchhhhhhhhhhc-
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG----CVAKINPLAPLDKVCILSCGVSTGLGATLNVA-  152 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~----~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~-  152 (341)
                                                   ..|+|++|++++..    .++++|+++++++++.++..+.|||+++.+.. 
T Consensus        97 -----------------------------~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~  147 (352)
T cd08247          97 -----------------------------GQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQ  147 (352)
T ss_pred             -----------------------------CCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhh
Confidence                                         13799999999987    78999999999999999999999999987766 


Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCCceecCCCCCCh--hHHHHHHHHh-cCCc
Q 019414          153 KPERGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMT-NGGV  227 (341)
Q Consensus       153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~--~~~~~i~~~~-~~~~  227 (341)
                      .+++|++++|+|+ |.+|++++++|+.+|. +.++++. ++++++.++++|++.+++.++.++  .+.+.++..+ ++++
T Consensus       148 ~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  226 (352)
T cd08247         148 KLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKF  226 (352)
T ss_pred             ccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCc
Confidence            7999999999987 8999999999998754 3567775 455566788999988888765431  1333344444 3489


Q ss_pred             cEEEeccCChHHHHHHHHHhc---CCCcEEEEEccCCC-Cccc-c--------cccceeeecceEEEeee---cCCCCCC
Q 019414          228 DRSVECTGNIDNMISAFECVH---DGWGVAVLVGVPSK-DAVF-M--------TKPINVLNERTLKGTFF---GNYKPRT  291 (341)
Q Consensus       228 d~vld~~g~~~~~~~~~~~l~---~~~g~~v~~g~~~~-~~~~-~--------~~~~~~~~~~~~~g~~~---~~~~~~~  291 (341)
                      |++|||+|+......++++++   ++ |+++.++.... +... .        .....+.++..+.....   .......
T Consensus       227 d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (352)
T cd08247         227 DLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNAD  305 (352)
T ss_pred             eEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHH
Confidence            999999998678889999999   97 99997742211 1000 0        00011112221111100   0001113


Q ss_pred             CHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414          292 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       292 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      .++.+++++.++.+.+  ++++.++++++++|++.+.+++. +|++++
T Consensus       306 ~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~  351 (352)
T cd08247         306 WIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIK  351 (352)
T ss_pred             HHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence            5777889999997653  36788999999999999988775 488875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.97  E-value=1.4e-28  Score=223.68  Aligned_cols=279  Identities=23%  Similarity=0.327  Sum_probs=221.7

Q ss_pred             CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|+......  ....+|.++|||++|+|+++|++++.+++||+|++...                    
T Consensus        31 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~--------------------   90 (323)
T cd05276          31 LIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLA--------------------   90 (323)
T ss_pred             EEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEecC--------------------
Confidence            47889999999886543221  22346889999999999999999999999999997621                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|++|+.++.+.++++|+++++.+++.++..+.++|+++.+...+.+++
T Consensus        91 -----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~  141 (323)
T cd05276          91 -----------------------------GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGE  141 (323)
T ss_pred             -----------------------------CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCC
Confidence                                         268999999999999999999999999999999999999988878899999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +++|+|+ |++|++++++++..|+ .++.+.+++++.+.++++|++.+++....+  +.+.+...+.+ ++|++||+.|+
T Consensus       142 ~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~g~  218 (323)
T cd05276         142 TVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRTED--FAEEVKEATGGRGVDVILDMVGG  218 (323)
T ss_pred             EEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCchh--HHHHHHHHhCCCCeEEEEECCch
Confidence            9999996 9999999999999999 788898999999999999988887766544  66777777665 89999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCCCC-------CCHHHHHHHHHCCCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYKPR-------TDLPSVVDMYMNKQLELE  308 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~i~~~  308 (341)
                       ..+...++++.++ |+++.++...... ..+. ...+.+++++.++........       ..++++++++.++++.+ 
T Consensus       219 -~~~~~~~~~~~~~-g~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  294 (323)
T cd05276         219 -DYLARNLRALAPD-GRLVLIGLLGGAKAELDL-APLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP-  294 (323)
T ss_pred             -HHHHHHHHhhccC-CEEEEEecCCCCCCCCch-HHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC-
Confidence             4578899999997 9999998643221 1221 112357788877664432110       12466778888887754 


Q ss_pred             CceeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414          309 KFITHRIPFSEINKAFEYMVKGEGL-RCI  336 (341)
Q Consensus       309 ~~~~~~~~~~~i~ea~~~~~~~~~~-k~v  336 (341)
                       +.++.|++++++++++.+.+++.. |++
T Consensus       295 -~~~~~~~~~~~~~a~~~~~~~~~~~kvv  322 (323)
T cd05276         295 -VIDKVFPLEEAAEAHRRMESNEHIGKIV  322 (323)
T ss_pred             -CcceEEcHHHHHHHHHHHHhCCCcceEe
Confidence             367889999999999999877654 665

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=99.96  E-value=4e-29  Score=230.91  Aligned_cols=281  Identities=23%  Similarity=0.318  Sum_probs=209.8

Q ss_pred             CccccccCCcCcceeeeccCC----------------CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----------------TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDC   64 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----------------~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c   64 (341)
                      +|++.++++|+.|........                ...+|.++|||++|+|+.+|++++++++||||++.+..     
T Consensus        33 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~-----  107 (350)
T cd08248          33 LIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP-----  107 (350)
T ss_pred             EEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccCCCCCEEEEecCC-----
Confidence            478899999999965432210                23568899999999999999999999999999986321     


Q ss_pred             hhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhh
Q 019414           65 RHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG  144 (341)
Q Consensus        65 ~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta  144 (341)
                                                               ...|+|++|+.++.+.++++|++++.++++.+++.+.||
T Consensus       108 -----------------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta  146 (350)
T cd08248         108 -----------------------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTA  146 (350)
T ss_pred             -----------------------------------------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHH
Confidence                                                     013799999999999999999999999999999999999


Q ss_pred             hhhhhhhcCCCC----CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHH
Q 019414          145 LGATLNVAKPER----GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI  219 (341)
Q Consensus       145 ~~~l~~~~~~~~----g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i  219 (341)
                      |+++.+...+.+    |++|+|+|+ |++|++++++|+.+|+ .|+++.++ ++.+.++++|++.+++....+  +.+.+
T Consensus       147 ~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~~~l  222 (350)
T cd08248         147 WSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDYNNED--FEEEL  222 (350)
T ss_pred             HHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEECCChh--HHHHH
Confidence            999877777654    999999985 9999999999999999 67777654 678888999998888765543  55544


Q ss_pred             HHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcc--cccc------c-ceeeecce-E-EEe---eec
Q 019414          220 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FMTK------P-INVLNERT-L-KGT---FFG  285 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~------~-~~~~~~~~-~-~g~---~~~  285 (341)
                      ...  +++|++||++|. .....++++++++ |+++.++.......  ....      . .+...... + ...   +..
T Consensus       223 ~~~--~~vd~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (350)
T cd08248         223 TER--GKFDVILDTVGG-DTEKWALKLLKKG-GTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF  298 (350)
T ss_pred             Hhc--CCCCEEEECCCh-HHHHHHHHHhccC-CEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE
Confidence            332  479999999987 4889999999998 99999985432111  0000      0 00000000 0 000   000


Q ss_pred             CCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCcc-eEEE
Q 019414          286 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII  337 (341)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl  337 (341)
                      .......++++++++.++.+.+  .+++.|++++++++++.+.+++.. |+++
T Consensus       299 ~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~vv~  349 (350)
T cd08248         299 FSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHARGKTVI  349 (350)
T ss_pred             ECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence            0111245888999999997654  367889999999999999877654 7765

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.96  E-value=4.7e-28  Score=221.36  Aligned_cols=283  Identities=16%  Similarity=0.166  Sum_probs=213.3

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +||+.++++|+.|........  .+.+|.++|||++|+|++  ++++.+++||+|++....              .+   
T Consensus        31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~--------------~~---   91 (324)
T cd08288          31 TVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWG--------------VG---   91 (324)
T ss_pred             EEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCCCCCEEEECCcc--------------CC---
Confidence            478899999999865432221  234578899999999999  778889999999976210              00   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh--hhcCCC-
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--NVAKPE-  155 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~-  155 (341)
                                                ....|+|++|++++.+.++++|++++.++++.++..+++++.++.  +..... 
T Consensus        92 --------------------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~  145 (324)
T cd08288          92 --------------------------ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTP  145 (324)
T ss_pred             --------------------------CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCC
Confidence                                      001369999999999999999999999999999999999987754  123445 


Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      ++++|+|+|+ |.+|++++|+|+.+|+ +|++++.++++.+.++++|++.++++.+.    ...++..+.+++|.++|++
T Consensus       146 ~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~d~~  220 (324)
T cd08288         146 GDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAEL----SEPGRPLQKERWAGAVDTV  220 (324)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcchh----hHhhhhhccCcccEEEECC
Confidence            6789999997 9999999999999999 78888889999999999999988887542    2345555555789999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      ++ ..+...+..+..+ |+++.+|..... ...... ..+.+++++.+........   .+.++.+.+++.++.+.+   
T Consensus       221 ~~-~~~~~~~~~~~~~-g~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  294 (324)
T cd08288         221 GG-HTLANVLAQTRYG-GAVAACGLAGGA-DLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---  294 (324)
T ss_pred             cH-HHHHHHHHHhcCC-CEEEEEEecCCC-CCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---
Confidence            87 5677888889987 999999864321 111111 2236788888765332211   124556677777886643   


Q ss_pred             eeeeecCCcHHHHHHHHhcCCcc-eEEEec
Q 019414          311 ITHRIPFSEINKAFEYMVKGEGL-RCIISM  339 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~~-k~vl~~  339 (341)
                      +++.+++++++++++.+.+++.. |+++++
T Consensus       295 i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         295 LTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            36899999999999999888864 888764

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=2e-28  Score=224.36  Aligned_cols=277  Identities=21%  Similarity=0.284  Sum_probs=210.3

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|........  ...+|.++|||++|+|+.+|++++.+++||+|++...                    
T Consensus        31 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------   90 (331)
T cd08273          31 VVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTR--------------------   90 (331)
T ss_pred             EEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCCCCEEEEeCC--------------------
Confidence            478899999998865432222  2246889999999999999999999999999997631                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|++++|+.++.+.++++|+++++++++.+++++.+||+++.+...+.+|+
T Consensus        91 -----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~  141 (331)
T cd08273          91 -----------------------------VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQ  141 (331)
T ss_pred             -----------------------------CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCC
Confidence                                         168999999999999999999999999999999999999987778899999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|+|+|+ |.+|++++++|+..|+ .|+.+.. +++.+.++++|+.. ++....+  +.+.  ...++++|+++|++++.
T Consensus       142 ~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~--~~~~--~~~~~~~d~vl~~~~~~  214 (331)
T cd08273         142 RVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRTKD--WLPA--MLTPGGVDVVFDGVGGE  214 (331)
T ss_pred             EEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCCcc--hhhh--hccCCCceEEEECCchH
Confidence            9999986 9999999999999999 7888876 88888899999754 4444333  3333  33345899999999884


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccc---------------cceeeecceEEEeeecC-CC---CCCCHHHHHH
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---------------PINVLNERTLKGTFFGN-YK---PRTDLPSVVD  298 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---------------~~~~~~~~~~~g~~~~~-~~---~~~~~~~~~~  298 (341)
                       ....++++++++ |+++.+|...........               ...+.++....+..... ..   ..+.++.+++
T Consensus       215 -~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  292 (331)
T cd08273         215 -SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLD  292 (331)
T ss_pred             -HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHH
Confidence             588999999998 999999865433221110               01111222222222110 00   1135778899


Q ss_pred             HHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCcc-eEEE
Q 019414          299 MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII  337 (341)
Q Consensus       299 ~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl  337 (341)
                      ++.++.+.+  .+++.+++++++++++.+.+++.. |+|+
T Consensus       293 ~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         293 LLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            999997754  367889999999999998877654 6664

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=5e-28  Score=220.78  Aligned_cols=286  Identities=25%  Similarity=0.380  Sum_probs=223.1

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|+.......  .+.+|.++|||++|+|+.+|++++++++||+|++.+...                  
T Consensus        31 ~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~------------------   92 (328)
T cd08268          31 LIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAAD------------------   92 (328)
T ss_pred             EEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccccc------------------
Confidence            467889999998866542221  234578999999999999999999999999999874211                  


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                ....|++++|+.++.+.++++|++++.++++.+++.+.++|+++.....+.+++
T Consensus        93 --------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  146 (328)
T cd08268          93 --------------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGD  146 (328)
T ss_pred             --------------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCC
Confidence                                      001368999999999999999999999999999999999999988888899999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +++|+|+ |++|++++++++..|+ .++.+++++++.+.++++|++.+++....+  +.+.+...+.+ ++|+++++.++
T Consensus       147 ~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~  223 (328)
T cd08268         147 SVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDEED--LVAEVLRITGGKGVDVVFDPVGG  223 (328)
T ss_pred             EEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCCcc--HHHHHHHHhCCCCceEEEECCch
Confidence            9999987 9999999999999999 788888899999999889988888776544  77777777766 89999999988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccc-eeeecceEEEeeecCCC--CC---CCHHHHHHHHHCCCCCCCCc
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYK--PR---TDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~--~~---~~~~~~~~~~~~~~i~~~~~  310 (341)
                       .....++++++++ |+++.++...... ...... .+.+++.+.+.......  +.   ..++.+.+++.++.+.+.  
T Consensus       224 -~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  298 (328)
T cd08268         224 -PQFAKLADALAPG-GTLVVYGALSGEP-TPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPV--  298 (328)
T ss_pred             -HhHHHHHHhhccC-CEEEEEEeCCCCC-CCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCC--
Confidence             6788899999997 9999998654321 111111 25677777766543211  10   124445566667766543  


Q ss_pred             eeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414          311 ITHRIPFSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                      .+..|++++++++++.+.+++. .|++++
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         299 VDRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            5688999999999999988765 488875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.96  E-value=4.5e-28  Score=220.83  Aligned_cols=281  Identities=21%  Similarity=0.278  Sum_probs=222.6

Q ss_pred             CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|.......  ....+|.++|||++|+|+.+|+++.++++||+|++...                    
T Consensus        31 ~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~--------------------   90 (325)
T TIGR02824        31 LIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVA--------------------   90 (325)
T ss_pred             EEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEccC--------------------
Confidence            36788899998885543221  22345789999999999999999999999999997521                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|++++|+.++.+.++++|++++...+++++.++.++|+++.+...+.+++
T Consensus        91 -----------------------------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~  141 (325)
T TIGR02824        91 -----------------------------GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGE  141 (325)
T ss_pred             -----------------------------CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCC
Confidence                                         268999999999999999999999999999999999999988888999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +++|+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++....+  +.+.++....+ ++|+++|++|+
T Consensus       142 ~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~  218 (325)
T TIGR02824       142 TVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYREED--FVEVVKAETGGKGVDVILDIVGG  218 (325)
T ss_pred             EEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCchh--HHHHHHHHcCCCCeEEEEECCch
Confidence            9999986 9999999999999999 788888899998889999987777665444  77777777765 89999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccce-eeecceEEEeeecCCCC-------CCCHHHHHHHHHCCCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP-------RTDLPSVVDMYMNKQLELE  308 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~i~~~  308 (341)
                       .....++++++++ |+++.++....... ...... +.+++++.+........       ...+..++++++++.+.+ 
T Consensus       219 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-  294 (325)
T TIGR02824       219 -SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP-  294 (325)
T ss_pred             -HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC-
Confidence             5788899999997 99999986442211 222222 36788888876443211       012455778888887653 


Q ss_pred             CceeeeecCCcHHHHHHHHhcCCc-ceEEEe
Q 019414          309 KFITHRIPFSEINKAFEYMVKGEG-LRCIIS  338 (341)
Q Consensus       309 ~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~  338 (341)
                       +.++.+++++++++++.+.+++. .|++++
T Consensus       295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  324 (325)
T TIGR02824       295 -VIDKVFPLEDAAQAHALMESGDHIGKIVLT  324 (325)
T ss_pred             -ccccEEeHHHHHHHHHHHHhCCCcceEEEe
Confidence             36788999999999999887765 488775

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=6.1e-28  Score=220.15  Aligned_cols=282  Identities=25%  Similarity=0.343  Sum_probs=219.1

Q ss_pred             CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|+......  .....|.++|||++|+|+.+|+++.++++||+|++....                   
T Consensus        31 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~-------------------   91 (326)
T cd08272          31 LVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGG-------------------   91 (326)
T ss_pred             EEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCC-------------------
Confidence            46888999999885543222  123457899999999999999999999999999976310                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                      +  .       ...|++++|+.++.+.++++|+++++..++.++..+.+||+++.+..++.+|+
T Consensus        92 ----------------~--~-------~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~  146 (326)
T cd08272          92 ----------------L--G-------GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQ  146 (326)
T ss_pred             ----------------c--C-------CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCC
Confidence                            0  0       01378999999999999999999999999999999999999988888999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +++|+|+ |.+|++++++|+..|+ .|+++.++ ++.+.++++|++.+++...  . +.+.+...+.+ ++|.++|++++
T Consensus       147 ~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~~~~~~~d~v~~~~~~  221 (326)
T cd08272         147 TVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEHTGGRGFDVVFDTVGG  221 (326)
T ss_pred             EEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHhcCCCCCcEEEECCCh
Confidence            9999985 9999999999999999 78888777 8888899999987776543  2 56667777776 89999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecC-----CCC---CCCHHHHHHHHHCCCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN-----YKP---RTDLPSVVDMYMNKQLELE  308 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~---~~~~~~~~~~~~~~~i~~~  308 (341)
                       ..+..+++++.++ |+++.++... .  ...... ..+++.+.+.....     ..+   ...++.+++++.++.+.. 
T Consensus       222 -~~~~~~~~~l~~~-g~~v~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-  294 (326)
T cd08272         222 -ETLDASFEAVALY-GRVVSILGGA-T--HDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP-  294 (326)
T ss_pred             -HHHHHHHHHhccC-CEEEEEecCC-c--cchhhH-hhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc-
Confidence             5788899999997 9999988653 1  111111 24566666554321     111   134677888888887653 


Q ss_pred             Ccee-eeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          309 KFIT-HRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       309 ~~~~-~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                       +++ +.|++++++++++.+.+++. .|+++++
T Consensus       295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         295 -LLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             -ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence             334 88999999999999987665 4888763

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.1e-27  Score=216.75  Aligned_cols=282  Identities=21%  Similarity=0.312  Sum_probs=218.3

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|........  .+.+|.++|||++|+|+.+|+++.++++||+|++...                    
T Consensus        30 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~--------------------   89 (337)
T cd08275          30 RVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTR--------------------   89 (337)
T ss_pred             EEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecC--------------------
Confidence            478889999998865432222  2345779999999999999999999999999997621                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|++|+.++.+.++++|+++++++++.+++++.++|+++.....+++|+
T Consensus        90 -----------------------------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  140 (337)
T cd08275          90 -----------------------------FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQ  140 (337)
T ss_pred             -----------------------------CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCC
Confidence                                         268999999999999999999999999999999999999988888999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|+|+|+ |.+|++++++|+.. +. .++.. .++++.+.++++|++.+++....+  +.+.++..+++++|+++|++|+
T Consensus       141 ~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~v~~~~g~  216 (337)
T cd08275         141 SVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYRTQD--YVEEVKKISPEGVDIVLDALGG  216 (337)
T ss_pred             EEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCCCCc--HHHHHHHHhCCCceEEEECCcH
Confidence            9999997 99999999999988 43 33333 345678888889998888776655  7777877776689999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcc--ccc-------------c-cceeeecceEEEeeecCCC-CC----CCHHH
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAV--FMT-------------K-PINVLNERTLKGTFFGNYK-PR----TDLPS  295 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~-------------~-~~~~~~~~~~~g~~~~~~~-~~----~~~~~  295 (341)
                       .....++++++++ |+++.+|.......  ...             . ...+.+++++.+....... ..    ..+++
T Consensus       217 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (337)
T cd08275         217 -EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDK  294 (337)
T ss_pred             -HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHH
Confidence             5778899999997 99999986542211  110             0 1124567777776543111 00    13667


Q ss_pred             HHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          296 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       296 ~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +++++.++.+.+.  .++.|++++++++++.+.+++. .|+++++
T Consensus       295 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         295 LLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            8888888876543  5688999999999999987765 4888764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=2.1e-27  Score=216.75  Aligned_cols=285  Identities=22%  Similarity=0.316  Sum_probs=215.9

Q ss_pred             CccccccCCcCcceeeeccCCCC-CCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTP-LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      +||+.++++|+.|+......... .+|.++|||++|+|+.+|++++++++||+|++....                    
T Consensus        31 ~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~--------------------   90 (325)
T cd08271          31 LVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL--------------------   90 (325)
T ss_pred             EEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCC--------------------
Confidence            47888999999886543322211 236789999999999999999999999999987311                    


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                                                ...|++++|+.++.+.++++|++++..+++.+++.+.+|++++.+...+.+|++
T Consensus        91 --------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~  144 (325)
T cd08271          91 --------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRT  144 (325)
T ss_pred             --------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCE
Confidence                                      012689999999999999999999999999999999999999888889999999


Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      ++|+|+ |.+|++++++++..|+ .|+.+. ++++.+.++++|++.+++....+  +.+.+...+.+ ++|.+++++++.
T Consensus       145 vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~~  220 (325)
T cd08271         145 ILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYNDED--VCERIKEITGGRGVDAVLDTVGGE  220 (325)
T ss_pred             EEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCCcc--HHHHHHHHcCCCCCcEEEECCCcH
Confidence            999997 8999999999999999 677765 66778888889998888776655  67777777766 899999999884


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcc-cccccceeeecceEEEeeecCC-----CCCCCHHHHHHHHHCCCCCCCCce
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGNY-----KPRTDLPSVVDMYMNKQLELEKFI  311 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~  311 (341)
                       .....++++++. |+++.++....... ..+......+++.+........     ...+.++++++++.++.+.+.  .
T Consensus       221 -~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~  296 (325)
T cd08271         221 -TAAALAPTLAFN-GHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--V  296 (325)
T ss_pred             -hHHHHHHhhccC-CEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--c
Confidence             556789999998 99998874432111 1111111223333333221111     011235678888988877543  5


Q ss_pred             eeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          312 THRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       312 ~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++.++++++.++++.+.+++. .|+++++
T Consensus       297 ~~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         297 IEVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             ceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            688999999999999987765 4888753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.4e-27  Score=217.30  Aligned_cols=278  Identities=23%  Similarity=0.311  Sum_probs=207.3

Q ss_pred             CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +|++.++++|+.|........    ...+|.++|||++|+|+++|+++.++++||+|++....                 
T Consensus        30 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-----------------   92 (319)
T cd08267          30 LVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-----------------   92 (319)
T ss_pred             EEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC-----------------
Confidence            468889999999865532222    12357789999999999999999999999999977321                 


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                                                   ...|+|++|+.++.+.++++|++++.++++.+++.+.+||+++.+...+++
T Consensus        93 -----------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  143 (319)
T cd08267          93 -----------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKP  143 (319)
T ss_pred             -----------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCC
Confidence                                         012689999999999999999999999999999999999999877777999


Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  234 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~  234 (341)
                      |++++|+|+ |++|++++++|+..|+ +|+++.++ ++.+.++++|++.+++....+  +.   ...+.+ ++|+++||+
T Consensus       144 g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~~~~~~~~~d~vi~~~  216 (319)
T cd08267         144 GQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---ALTAGGEKYDVIFDAV  216 (319)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---hhccCCCCCcEEEECC
Confidence            999999997 9999999999999999 78887765 888888999998888766544  33   333444 899999999


Q ss_pred             CC-hHHHHHHHHHhcCCCcEEEEEccCCCCccccc---ccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCc
Q 019414          235 GN-IDNMISAFECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       235 g~-~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      ++ .......+..++++ |+++.+|..........   ..........+.......  ..+.++++++++.++++.+  +
T Consensus       217 ~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~--~  291 (319)
T cd08267         217 GNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQLAELVEEGKLKP--V  291 (319)
T ss_pred             CchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHHHHHHHHCCCeee--e
Confidence            84 23334444458897 99999986543322111   000011111122111111  1356888999999987653  4


Q ss_pred             eeeeecCCcHHHHHHHHhcCCcc-eEE
Q 019414          311 ITHRIPFSEINKAFEYMVKGEGL-RCI  336 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~~-k~v  336 (341)
                      +++.|++++++++++.+.+++.. |++
T Consensus       292 ~~~~~~~~~i~~a~~~~~~~~~~~~vv  318 (319)
T cd08267         292 IDSVYPLEDAPEAYRRLKSGRARGKVV  318 (319)
T ss_pred             eeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence            67899999999999999877654 655

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=2.7e-27  Score=215.40  Aligned_cols=280  Identities=24%  Similarity=0.427  Sum_probs=222.4

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      +|++.++++|+.|........  .+..|.++|||++|+|+.+|++++++++||+|+....                    
T Consensus        31 ~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~--------------------   90 (323)
T cd08241          31 RIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG--------------------   90 (323)
T ss_pred             EEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC--------------------
Confidence            367788899988855432211  2234668999999999999999999999999997630                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|++++|+.++.+.++++|++++..+++.+...+.+|++++.+...+.+++
T Consensus        91 -----------------------------~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  141 (323)
T cd08241          91 -----------------------------QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGE  141 (323)
T ss_pred             -----------------------------CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCC
Confidence                                         268999999999999999999999998889999999999987778899999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|+|+|+ |.+|++++++|+..|+ .|+.++.++++.+.++++|++.+++....+  +.+.+...+++ ++|.++|++|+
T Consensus       142 ~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~d~v~~~~g~  218 (323)
T cd08241         142 TVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRDPD--LRERVKALTGGRGVDVVYDPVGG  218 (323)
T ss_pred             EEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCCcc--HHHHHHHHcCCCCcEEEEECccH
Confidence            9999997 9999999999999999 788888899999999999988877766544  77778887776 89999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcc-cccccceeeecceEEEeeecCCCC------CCCHHHHHHHHHCCCCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGNYKP------RTDLPSVVDMYMNKQLELEK  309 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~i~~~~  309 (341)
                       ..+..++++++++ |+++.++....... +... ..+.+++++.+.....+..      ...++++++++.++.+.+  
T Consensus       219 -~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  293 (323)
T cd08241         219 -DVFEASLRSLAWG-GRLLVIGFASGEIPQIPAN-LLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP--  293 (323)
T ss_pred             -HHHHHHHHhhccC-CEEEEEccCCCCcCcCCHH-HHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc--
Confidence             6788899999998 99999986433221 1111 2245677777765433211      124677888998987653  


Q ss_pred             ceeeeecCCcHHHHHHHHhcCCc-ceEEE
Q 019414          310 FITHRIPFSEINKAFEYMVKGEG-LRCII  337 (341)
Q Consensus       310 ~~~~~~~~~~i~ea~~~~~~~~~-~k~vl  337 (341)
                      +.+..|++++++++++.+.+++. .|+++
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~vvv  322 (323)
T cd08241         294 HVSAVFPLEQAAEALRALADRKATGKVVL  322 (323)
T ss_pred             ccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            36788999999999998877665 47765

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.96  E-value=1.4e-27  Score=215.99  Aligned_cols=272  Identities=21%  Similarity=0.328  Sum_probs=211.6

Q ss_pred             CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      +||+.++++|+.|........    ...+|.++|||++|+|+.+|+++.++++||+|++.+..                 
T Consensus        31 ~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~-----------------   93 (309)
T cd05289          31 LVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPF-----------------   93 (309)
T ss_pred             EEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCC-----------------
Confidence            478889999998865432221    23458899999999999999999999999999977310                 


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                                                   ...|+|++|+.++...++++|+++++..++.++..+.++++++.+...+.+
T Consensus        94 -----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  144 (309)
T cd05289          94 -----------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKA  144 (309)
T ss_pred             -----------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCC
Confidence                                         012689999999999999999999999999999999999999877777999


Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +++++|+|+ |.+|++++++++..|+ .|+++..++ +.+.++++|++.+++....+  +.+   ...++++|+++|+++
T Consensus       145 ~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~--~~~---~~~~~~~d~v~~~~~  217 (309)
T cd05289         145 GQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTKGD--FER---AAAPGGVDAVLDTVG  217 (309)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCCCc--hhh---ccCCCCceEEEECCc
Confidence            999999996 9999999999999999 777777777 88888889988887766544  332   222238999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      + .....++++++++ |+++.++.......     ..+.++..+........  ...+++++++++++.+.+  ++++.|
T Consensus       218 ~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~  286 (309)
T cd05289         218 G-ETLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLRP--VVDRVF  286 (309)
T ss_pred             h-HHHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEEE--eeccEE
Confidence            7 4788999999998 99999986543211     11234444444333211  356888999999987643  367899


Q ss_pred             cCCcHHHHHHHHhcCCcc-eEE
Q 019414          316 PFSEINKAFEYMVKGEGL-RCI  336 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~~-k~v  336 (341)
                      ++++++++++.+.+++.. |++
T Consensus       287 ~~~~~~~a~~~~~~~~~~~kvv  308 (309)
T cd05289         287 PLEDAAEAHERLESGHARGKVV  308 (309)
T ss_pred             cHHHHHHHHHHHHhCCCCCcEe
Confidence            999999999998877653 655

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.95  E-value=1.7e-27  Score=231.02  Aligned_cols=272  Identities=16%  Similarity=0.211  Sum_probs=220.6

Q ss_pred             ccccCCcCcceeeeccCCCCC-CC-------ccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCC
Q 019414            4 QKHNSFNPRNFVFGFQGQTPL-FP-------RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC   75 (341)
Q Consensus         4 ~~~~~~n~~~~~~~~~~~~~~-~p-------~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c   75 (341)
                      +-|+.+|++|.+.......++ .|       .++|-|++|+          .+-|.||+....                 
T Consensus      1451 VYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRvM~mvp----------------- 1503 (2376)
T KOG1202|consen 1451 VYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRVMGMVP----------------- 1503 (2376)
T ss_pred             EEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEEEEeee-----------------
Confidence            457889999976644444332 23       5899999998          445999986631                 


Q ss_pred             ccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCC
Q 019414           76 DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE  155 (341)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  155 (341)
                                                      .-++++-+.++.++++.+|.+.++++|++.|+.++|+||||..+.+.+
T Consensus      1504 --------------------------------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mk 1551 (2376)
T KOG1202|consen 1504 --------------------------------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMK 1551 (2376)
T ss_pred             --------------------------------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhcccc
Confidence                                            127899999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC----ceecCCCCCChhHHHHHHHHhcC-CccE
Q 019414          156 RGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV----TDFVNTSEHDRPIQEVIAEMTNG-GVDR  229 (341)
Q Consensus       156 ~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~~i~~~~~~-~~d~  229 (341)
                      +|++|||++ +|++|++||.+|.+.|. .|+.+..++||++++.+.-.    ..+-|.++.+  |..-++..|.+ |+|+
T Consensus      1552 kGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdts--FEq~vl~~T~GrGVdl 1628 (2376)
T KOG1202|consen 1552 KGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRDTS--FEQHVLWHTKGRGVDL 1628 (2376)
T ss_pred             CCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccccccc--HHHHHHHHhcCCCeee
Confidence            999999995 59999999999999999 99999999999999876433    3455555555  99999999999 9999


Q ss_pred             EEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCC--CCCHHHHHHHHHCCCC--
Q 019414          230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQL--  305 (341)
Q Consensus       230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~i--  305 (341)
                      |++.... +-++.+++||+-+ |+|..+|--.-..+.++....+.+|.+++|..+.+...  .+++.++..++++|.-  
T Consensus      1629 VLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksG 1706 (2376)
T KOG1202|consen 1629 VLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSG 1706 (2376)
T ss_pred             ehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccC
Confidence            9999854 8899999999998 99999995433333445556688999999987654432  2467778888877622  


Q ss_pred             CCCCceeeeecCCcHHHHHHHHhcCCcc-eEEEec
Q 019414          306 ELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISM  339 (341)
Q Consensus       306 ~~~~~~~~~~~~~~i~ea~~~~~~~~~~-k~vl~~  339 (341)
                      ...|+.+++|+-.++++||++|.+++++ |+|+.+
T Consensus      1707 vV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1707 VVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             ceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence            3566678999999999999999999985 999875

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.93  E-value=6.9e-24  Score=181.11  Aligned_cols=278  Identities=18%  Similarity=0.207  Sum_probs=213.9

Q ss_pred             CccccccCCcCcceeeeccCCCCC--CCcccc----ccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPL--FPRIFG----HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM   74 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~--~p~i~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~   74 (341)
                      |||+-+-+..|-++.++....+.+  .|+.||    ..++|+|++.  +-+++++||.|....                 
T Consensus        41 lvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~-----------------  101 (343)
T KOG1196|consen   41 LVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV-----------------  101 (343)
T ss_pred             EeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec-----------------
Confidence            567777788888777654444332  133344    3789999995  567899999999763                 


Q ss_pred             CccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCce--EECCC--CCC--chhhhhccccchhhhhhh
Q 019414           75 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV--AKINP--LAP--LDKVCILSCGVSTGLGAT  148 (341)
Q Consensus        75 c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~--~~lp~--~~~--~~~aa~l~~~~~ta~~~l  148 (341)
                                                         +|.||..+++...  +++|.  +++  +.. ..+..+..|||..+
T Consensus       102 -----------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~yl-g~lGm~glTAy~Gf  145 (343)
T KOG1196|consen  102 -----------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYL-GLLGMPGLTAYAGF  145 (343)
T ss_pred             -----------------------------------cceEEEEecCcchhcccCCCCCccCHhhhh-hccCCchhHHHHHH
Confidence                                               7899999887544  34433  232  222 34566789999999


Q ss_pred             hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCC-ChhHHHHHHHHhcC
Q 019414          149 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH-DRPIQEVIAEMTNG  225 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~-~~~~~~~i~~~~~~  225 (341)
                      .+...+++|++|+|-|| |++|+++.|+||.+|. .|+++..++||.++++. +|.+..+||.++ +  +.++++...++
T Consensus       146 ~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~--~~~aL~r~~P~  222 (343)
T KOG1196|consen  146 YEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESD--LSAALKRCFPE  222 (343)
T ss_pred             HHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCccC--HHHHHHHhCCC
Confidence            99999999999999986 9999999999999999 99999999999998876 699999999876 5  88889888888


Q ss_pred             CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC---Cccccc--ccceeeecceEEEeeecCCCCC--CCHHHHHH
Q 019414          226 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK---DAVFMT--KPINVLNERTLKGTFFGNYKPR--TDLPSVVD  298 (341)
Q Consensus       226 ~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~---~~~~~~--~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~  298 (341)
                      ++|+.||.+|+ ..++..+..++.. |+++.+|+.+.   +.+..+  ....+.|++++.|+....+.+.  ..++.+.+
T Consensus       223 GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~  300 (343)
T KOG1196|consen  223 GIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLP  300 (343)
T ss_pred             cceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHH
Confidence            99999999998 7889999999997 99999997542   111111  1233568888888766554321  35678889


Q ss_pred             HHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          299 MYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       299 ~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      ++++|+|....-+  .-.|+..++||.-|.+|+. +|.++.+.
T Consensus       301 ~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va  341 (343)
T KOG1196|consen  301 YIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVA  341 (343)
T ss_pred             HHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEee
Confidence            9999999765322  3359999999999999987 48888765

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.85  E-value=3.4e-22  Score=153.02  Aligned_cols=103  Identities=30%  Similarity=0.523  Sum_probs=86.6

Q ss_pred             CccccccCCcCcceeeecc--CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ--GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~--~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+.....  ....++|.++|||++|+|+++|+++++|++||||++.+...|+.|++|+.+++++|+..
T Consensus         5 lVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~   84 (109)
T PF08240_consen    5 LVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNP   84 (109)
T ss_dssp             EEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTB
T ss_pred             EEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCC
Confidence            6899999999999665444  34557899999999999999999999999999999999999999999999999999876


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEEC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  125 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~l  125 (341)
                      ....                      ...+|+||||+.+|+++++++
T Consensus        85 ~~~g----------------------~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   85 EVLG----------------------LGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             EETT----------------------TSSTCSSBSEEEEEGGGEEEE
T ss_pred             CEeE----------------------cCCCCcccCeEEEehHHEEEC
Confidence            6542                      223479999999999999975

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.74  E-value=1.7e-17  Score=131.05  Aligned_cols=127  Identities=32%  Similarity=0.534  Sum_probs=110.8

Q ss_pred             HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHH
Q 019414          167 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE  245 (341)
Q Consensus       167 ~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~  245 (341)
                      ++|++++|+||..|+ +|++++++++|+++++++|++.++++++.+  +.+.+++.+++ ++|+||||+|+++.++.+++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~   77 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK   77 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence            589999999999996 999999999999999999999999998887  99999999998 99999999998899999999


Q ss_pred             HhcCCCcEEEEEccCC-CCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHH
Q 019414          246 CVHDGWGVAVLVGVPS-KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM  301 (341)
Q Consensus       246 ~l~~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  301 (341)
                      +++++ |+++.+|... ....++. ...+.+++++.|+..+..   +++++++++++
T Consensus        78 ~l~~~-G~~v~vg~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~~la  129 (130)
T PF00107_consen   78 LLRPG-GRIVVVGVYGGDPISFNL-MNLMFKEITIRGSWGGSP---EDFQEALQLLA  129 (130)
T ss_dssp             HEEEE-EEEEEESSTSTSEEEEEH-HHHHHTTEEEEEESSGGH---HHHHHHHHHHH
T ss_pred             HhccC-CEEEEEEccCCCCCCCCH-HHHHhCCcEEEEEccCCH---HHHHHHHHHhc
Confidence            99998 9999999887 2222222 334679999999987664   67888888875

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.45  E-value=2e-12  Score=119.86  Aligned_cols=176  Identities=21%  Similarity=0.206  Sum_probs=133.5

Q ss_pred             hhhhhhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHh
Q 019414          145 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       145 ~~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.++.+..+ .-+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+.        ..+.+    
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~--------~~e~v----  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT--------MEEAV----  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc--------HHHHH----
Confidence            344444444 3689999999999999999999999999 899999999999999999985331        22222    


Q ss_pred             cCCccEEEeccCChHHHHHH-HHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHH--HHHHHH
Q 019414          224 NGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLP--SVVDMY  300 (341)
Q Consensus       224 ~~~~d~vld~~g~~~~~~~~-~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~  300 (341)
                       .++|+||+|+|.+..+... ++.++++ ++++.+|..  +..++... ...+++++.++.....  ...++  +.+.++
T Consensus       256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~~~-L~~~el~i~g~~~~~~--~~~~~~g~aI~LL  328 (413)
T cd00401         256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDVKG-LKENAVEVVNIKPQVD--RYELPDGRRIILL  328 (413)
T ss_pred             -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCHHH-HHhhccEEEEccCCcc--eEEcCCcchhhhh
Confidence             2589999999998888876 9999997 999999954  33344322 2446777777654322  11345  689999


Q ss_pred             HCCCC-CCCCceeee-----ecCC-cHHHHHHHHhcCCc--ceEEEecC
Q 019414          301 MNKQL-ELEKFITHR-----IPFS-EINKAFEYMVKGEG--LRCIISME  340 (341)
Q Consensus       301 ~~~~i-~~~~~~~~~-----~~~~-~i~ea~~~~~~~~~--~k~vl~~~  340 (341)
                      .+|++ .+...+++.     ++|+ |+.+++..+.+++.  .|+++.+.
T Consensus       329 a~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~  377 (413)
T cd00401         329 AEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK  377 (413)
T ss_pred             hCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence            99998 888888888     9999 99999999987764  47777654

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.36  E-value=2e-11  Score=116.03  Aligned_cols=154  Identities=18%  Similarity=0.157  Sum_probs=112.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCC-----------hhHHHHHHH
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-----------RPIQEVIAE  221 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~-----------~~~~~~i~~  221 (341)
                      ..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+           .++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4689999999999999999999999999 89999999999999999999854 5553321           123333333


Q ss_pred             H-hc--CCccEEEeccCCh-----HH-HHHHHHHhcCCCcEEEEEccC-CCCcccccc-cceee-ecceEEEeeecCCCC
Q 019414          222 M-TN--GGVDRSVECTGNI-----DN-MISAFECVHDGWGVAVLVGVP-SKDAVFMTK-PINVL-NERTLKGTFFGNYKP  289 (341)
Q Consensus       222 ~-~~--~~~d~vld~~g~~-----~~-~~~~~~~l~~~~g~~v~~g~~-~~~~~~~~~-~~~~~-~~~~~~g~~~~~~~~  289 (341)
                      . .+  +++|++|+|++.+     .. .++.++.++++ |++++++.. ..+...... ...+. +++++.|.....   
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P---  316 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP---  316 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc---
Confidence            3 33  3799999999863     35 49999999998 999999974 332122221 22344 799998876322   


Q ss_pred             CCCHHHHHHHHHCCCCCCCCcee
Q 019414          290 RTDLPSVVDMYMNKQLELEKFIT  312 (341)
Q Consensus       290 ~~~~~~~~~~~~~~~i~~~~~~~  312 (341)
                      .+...+..+++.++.+.+.++++
T Consensus       317 ~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        317 SRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             hhHHHHHHHHHHhCCccHHHHhc
Confidence            23344688999998877665554

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.13  E-value=6.5e-12  Score=98.63  Aligned_cols=120  Identities=19%  Similarity=0.337  Sum_probs=75.3

Q ss_pred             cCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC--ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecc
Q 019414          200 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG--NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER  277 (341)
Q Consensus       200 ~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g--~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~  277 (341)
                      ||+++++|++..+  +      ...+++|+|||++|  ....+..++++| ++ |+++.++.   . ......  ..+..
T Consensus         1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~---~-~~~~~~--~~~~~   64 (127)
T PF13602_consen    1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG---D-LPSFAR--RLKGR   64 (127)
T ss_dssp             CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S---H-HHHHHH--HHHCH
T ss_pred             CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC---c-ccchhh--hhccc
Confidence            6899999998554  4      22458999999999  644557777888 97 99999983   0 000100  01112


Q ss_pred             eEEEeeecCCC----CCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEE
Q 019414          278 TLKGTFFGNYK----PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII  337 (341)
Q Consensus       278 ~~~g~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl  337 (341)
                      .+....+....    ..+.++++++++++|++.+.  +.++|||+++++|++.+++++. +|+||
T Consensus        65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence            22222222100    11359999999999987654  7789999999999999999886 58886

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.68  E-value=1.2e-07  Score=84.45  Aligned_cols=167  Identities=17%  Similarity=0.258  Sum_probs=103.1

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcC
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~-~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      .+.+++|++||.+|+|. |..++++++..|.. +|++++.+++..+.+++.    +.+.+- ....+  +.+ + .+.++
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d--~~~-l-~~~~~  145 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGE--IEA-L-PVADN  145 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcc--hhh-C-CCCCC
Confidence            35788999999999877 88888888887753 799999999998888763    332221 11111  111 1 12234


Q ss_pred             CccEEEecc------CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHH
Q 019414          226 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM  299 (341)
Q Consensus       226 ~~d~vld~~------g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  299 (341)
                      .||+|+...      .....++++++.|+|+ |++++.+...... .+   ..+.+...+.+......   ...+++.++
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~~-~~---~~~~~~~~~~~~~~~~~---~~~~e~~~~  217 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRGE-LP---EEIRNDAELYAGCVAGA---LQEEEYLAM  217 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccCC-CC---HHHHHhHHHHhccccCC---CCHHHHHHH
Confidence            799998432      2245799999999998 9999987543221 11   11222222222111221   345667777


Q ss_pred             HHCCCC-CCCCceeeeecCCcHHHHHHHH--hcCC
Q 019414          300 YMNKQL-ELEKFITHRIPFSEINKAFEYM--VKGE  331 (341)
Q Consensus       300 ~~~~~i-~~~~~~~~~~~~~~i~ea~~~~--~~~~  331 (341)
                      +++.-+ .........++++++.++++.+  .+++
T Consensus       218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~  252 (272)
T PRK11873        218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR  252 (272)
T ss_pred             HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence            776333 2332344568899999999988  5544

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.46  E-value=2e-06  Score=81.94  Aligned_cols=105  Identities=21%  Similarity=0.242  Sum_probs=80.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCC-----------ChhHHHHHHHH
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH-----------DRPIQEVIAEM  222 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~-----------~~~~~~~i~~~  222 (341)
                      .++++++|+|+|.+|++++++++.+|+ .|++++.+.++++.++++|++.+ ++..+.           +.++.+...+.
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467999999999999999999999999 79999999999999999999763 332110           12244444444


Q ss_pred             hc---CCccEEEecc---CChH---HHHHHHHHhcCCCcEEEEEccCC
Q 019414          223 TN---GGVDRSVECT---GNID---NMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       223 ~~---~~~d~vld~~---g~~~---~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      ..   .++|++|+|+   |.+.   ..++.++.++++ +.++++....
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~  287 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQ  287 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCC
Confidence            33   3799999998   5433   466779999998 9999997643

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.41  E-value=1.6e-08  Score=95.34  Aligned_cols=160  Identities=18%  Similarity=0.199  Sum_probs=108.1

Q ss_pred             cccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccC
Q 019414           28 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG  107 (341)
Q Consensus        28 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  107 (341)
                      --|.|+++.+.+|++++.+     +|++.+.+ ||.|.+|    ++.|......            |          ...
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~------------g----------~~l  136 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV------------G----------KVL  136 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc------------h----------HHH
Confidence            3789999999999998765     88888888 9999999    6666655442            1          112


Q ss_pred             CCcccceEEeecCceEE---C-CCCCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Q 019414          108 TSTFSEYTVVHSGCVAK---I-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR  183 (341)
Q Consensus       108 ~g~~ae~~~v~~~~~~~---l-p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~  183 (341)
                      ++.|++++.++. .+..   + +..+|...+|         .....+.....++.+|+|+|+|.+|.++++.++..|+..
T Consensus       137 ~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~  206 (417)
T TIGR01035       137 ERLFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK  206 (417)
T ss_pred             HHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence            358999998876 3332   2 2223322211         111123334467899999999999999999999999768


Q ss_pred             EEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          184 IIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       184 vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |+++.++.++.+ +++++|.. .+...    ++.+.+     .++|+||.|++++..
T Consensus       207 V~v~~rs~~ra~~la~~~g~~-~i~~~----~l~~~l-----~~aDvVi~aT~s~~~  253 (417)
T TIGR01035       207 ILIANRTYERAEDLAKELGGE-AVKFE----DLEEYL-----AEADIVISSTGAPHP  253 (417)
T ss_pred             EEEEeCCHHHHHHHHHHcCCe-EeeHH----HHHHHH-----hhCCEEEECCCCCCc
Confidence            999999988754 66777764 22221    122222     258999999987543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.25  E-value=1.8e-05  Score=74.01  Aligned_cols=103  Identities=26%  Similarity=0.270  Sum_probs=78.0

Q ss_pred             hhhhhhhhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHH
Q 019414          144 GLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       144 a~~~l~~~~~~~-~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      .|.++.+...+. .|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|+. +.+       +.+.+   
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal---  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA---  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence            344444443544 89999999999999999999999999 899999998887666666654 221       22222   


Q ss_pred             hcCCccEEEeccCChHHHH-HHHHHhcCCCcEEEEEccCC
Q 019414          223 TNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       223 ~~~~~d~vld~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  261 (341)
                        .++|++|+++|....+. ..+..++++ +.++..|...
T Consensus       266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d  302 (425)
T PRK05476        266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD  302 (425)
T ss_pred             --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence              25899999999877776 678888887 8888888654

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.19  E-value=3.4e-05  Score=67.82  Aligned_cols=133  Identities=18%  Similarity=0.217  Sum_probs=82.9

Q ss_pred             cccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Q 019414          110 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  188 (341)
Q Consensus       110 ~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~  188 (341)
                      +|.+|.. +...++.+++++++..+. .+   .|.. ++.... .+.++++||-+|+|. |.+++.+++ .|..+|++++
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~---tt~~-~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giD  149 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGT-HP---TTRL-CLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVD  149 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCC-CH---HHHH-HHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEE
Confidence            5556644 667788999888776543 11   1111 111111 256889999999987 877776554 6776799999


Q ss_pred             CChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC--CccEEEeccCCh---HHHHHHHHHhcCCCcEEEEEccCC
Q 019414          189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       189 ~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~--~~d~vld~~g~~---~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      .++...+.+++.-...-+.  +.       + ....+  .||+|+-.....   ..++++.+.|+++ |.+++.+...
T Consensus       150 is~~~l~~A~~n~~~~~~~--~~-------~-~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~  216 (250)
T PRK00517        150 IDPQAVEAARENAELNGVE--LN-------V-YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE  216 (250)
T ss_pred             CCHHHHHHHHHHHHHcCCC--ce-------E-EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence            9999888776531111010  00       0 00111  589998654332   3567888999998 9999987543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.19  E-value=4.5e-05  Score=68.66  Aligned_cols=97  Identities=19%  Similarity=0.282  Sum_probs=75.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+.+++|+|.|.+|+++++.++.+|+ +|++++++.++.+.++++|+..+ ..        +.+.+.. .++|+||++++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~l-~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEEV-GKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHHh-CCCCEEEECCC
Confidence            68999999999999999999999999 99999999988888888887532 11        1112221 25999999987


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCc
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDA  264 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~  264 (341)
                      .....+..++.++++ +.++.++......
T Consensus       220 ~~~i~~~~l~~~~~g-~vIIDla~~pggt  247 (296)
T PRK08306        220 ALVLTKEVLSKMPPE-ALIIDLASKPGGT  247 (296)
T ss_pred             hhhhhHHHHHcCCCC-cEEEEEccCCCCc
Confidence            643456677888997 9999998765543

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.11  E-value=4.6e-05  Score=70.94  Aligned_cols=101  Identities=29%  Similarity=0.314  Sum_probs=76.8

Q ss_pred             hhhhhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhc
Q 019414          146 GATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       146 ~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .++.+..+ ...|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...++..|+. +++       ..+.+     
T Consensus       183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal-----  248 (406)
T TIGR00936       183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA-----  248 (406)
T ss_pred             HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----
Confidence            33444433 3689999999999999999999999999 899998888887777767763 221       22222     


Q ss_pred             CCccEEEeccCChHHHHH-HHHHhcCCCcEEEEEccCC
Q 019414          225 GGVDRSVECTGNIDNMIS-AFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       225 ~~~d~vld~~g~~~~~~~-~~~~l~~~~g~~v~~g~~~  261 (341)
                      .+.|++|++.|.+..+.. .+..++++ +.++..|-..
T Consensus       249 ~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~  285 (406)
T TIGR00936       249 KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD  285 (406)
T ss_pred             hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence            247999999999877764 88888887 8988887543

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=98.06  E-value=8.8e-08  Score=90.60  Aligned_cols=161  Identities=21%  Similarity=0.177  Sum_probs=98.8

Q ss_pred             cccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccC
Q 019414           28 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG  107 (341)
Q Consensus        28 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  107 (341)
                      --|||+++.+.+|++++.+     +|++.+.. ||.|..    .++.|......            +..          .
T Consensus        91 ~~g~ea~~hl~~V~~GldS-----~V~GE~qI-lgQvk~----a~~~a~~~g~~------------g~~----------l  138 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDS-----MVLGEPQI-LGQVKD----AYALAQEAGTV------------GTI----------L  138 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHH----HHHHHHHcCCc------------hHH----------H
Confidence            3799999999999998876     55555555 555542    22333332221            111          1


Q ss_pred             CCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcC---CCCCCEEEEECCCHHHHHHHHHHHHcCCCEE
Q 019414          108 TSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK---PERGSSVAVFGLGAVGLAAAEGARIAGASRI  184 (341)
Q Consensus       108 ~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~vlI~G~g~~G~~a~~la~~~g~~~v  184 (341)
                      .+.|++.+.++        +.+..+.+ ....+.+.++.++.....   -.++.+|+|+|+|.+|.++++.++..|+..|
T Consensus       139 ~~lf~~a~~~~--------k~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V  209 (423)
T PRK00045        139 NRLFQKAFSVA--------KRVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI  209 (423)
T ss_pred             HHHHHHHHHHH--------hhHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence            13566555444        32222221 222345566666432222   2578999999999999999999999998789


Q ss_pred             EEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          185 IGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       185 v~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      +++.++.++.+ +++++|.+ +++..+    +.+.+     .++|+||.|++++..
T Consensus       210 ~v~~r~~~ra~~la~~~g~~-~~~~~~----~~~~l-----~~aDvVI~aT~s~~~  255 (423)
T PRK00045        210 TVANRTLERAEELAEEFGGE-AIPLDE----LPEAL-----AEADIVISSTGAPHP  255 (423)
T ss_pred             EEEeCCHHHHHHHHHHcCCc-EeeHHH----HHHHh-----ccCCEEEECCCCCCc
Confidence            99999988855 67778753 322211    21111     258999999987543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.01  E-value=1.4e-05  Score=72.47  Aligned_cols=109  Identities=24%  Similarity=0.221  Sum_probs=76.9

Q ss_pred             CceEECCCCCCchhhhhccccchhhhhhhhhhcCC---CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-H
Q 019414          120 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP---ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-E  195 (341)
Q Consensus       120 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~-~  195 (341)
                      ...+++|+.+..++++.. .+.+.++.++......   -++.+|+|+|+|.+|..+++.++..|...|++++++.++. +
T Consensus       139 ~~a~~~~k~vr~et~i~~-~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISR-GAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            345677888887776554 4667777774322221   4789999999999999999999988877899999998764 6


Q ss_pred             HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       196 ~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      +++++|+. +++..    ++.+.+     ...|+||.|++.+..
T Consensus       218 la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence            77888873 33221    122222     248999999998655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02494 adenosylhomocysteinase

Probab=98.00  E-value=8.2e-05  Score=70.02  Aligned_cols=101  Identities=21%  Similarity=0.284  Sum_probs=77.7

Q ss_pred             hhhhhhhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHh
Q 019414          145 LGATLNVAKP-ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       145 ~~~l~~~~~~-~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.++.+..++ -.|++++|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|...+      +  ..+.+    
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv------~--leEal----  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL------T--LEDVV----  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec------c--HHHHH----
Confidence            3344444443 579999999999999999999999999 89999988887766766776522      1  32222    


Q ss_pred             cCCccEEEeccCChHHH-HHHHHHhcCCCcEEEEEccC
Q 019414          224 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       224 ~~~~d~vld~~g~~~~~-~~~~~~l~~~~g~~v~~g~~  260 (341)
                       ...|+++.+.|....+ ...++.++++ +.++.+|..
T Consensus       308 -~~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~  343 (477)
T PLN02494        308 -SEADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF  343 (477)
T ss_pred             -hhCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence             2479999999986654 7899999997 999999864

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.97  E-value=3.4e-06  Score=83.04  Aligned_cols=99  Identities=23%  Similarity=0.272  Sum_probs=67.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC---------------------hhhHHHHHHcCCceecCCCC-
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---------------------SKRFEEAKKFGVTDFVNTSE-  210 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~---------------------~~~~~~~~~~g~~~vv~~~~-  210 (341)
                      .+++|++|+|+|+|+.|+++++.++..|+ .|++++..                     +.+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            46789999999999999999999999999 78888743                     35567788899987776543 


Q ss_pred             CChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          211 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       211 ~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .+... +.+    ..++|+||+++|........+...... |.+..++
T Consensus       212 ~~~~~-~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~-gv~~~~~  253 (564)
T PRK12771        212 EDITL-EQL----EGEFDAVFVAIGAQLGKRLPIPGEDAA-GVLDAVD  253 (564)
T ss_pred             CcCCH-HHH----HhhCCEEEEeeCCCCCCcCCCCCCccC-CcEEHHH
Confidence            22111 111    236999999999754433333333333 4444443

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.95  E-value=3.1e-05  Score=64.84  Aligned_cols=101  Identities=20%  Similarity=0.298  Sum_probs=76.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHHcCCcee-cCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKFGVTDF-VNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~----~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~  222 (341)
                      +.+...+++|++||=+|+|. |..++-+|+..+  +|+++++.++    .++.++.+|...| +...+..       .-+
T Consensus        64 m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~-------~G~  133 (209)
T COG2518          64 MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS-------KGW  133 (209)
T ss_pred             HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc-------cCC
Confidence            35778999999999999874 899999999888  8999999887    4455677888543 2232322       122


Q ss_pred             hcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ... +||.|+-+.+.++..+.+++.|+++ |+++.--.
T Consensus       134 ~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG  170 (209)
T COG2518         134 PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG  170 (209)
T ss_pred             CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence            333 8999998887777778999999998 88876643

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.80  E-value=0.00065  Score=63.17  Aligned_cols=97  Identities=23%  Similarity=0.190  Sum_probs=67.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      ++.+++|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.+ ++........+.     +.+.+.. ..+|++|+|+
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~-----~~l~~~l-~~aDvVI~a~  238 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSNA-----YEIEDAV-KRADLLIGAV  238 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCCH-----HHHHHHH-ccCCEEEEcc
Confidence            34569999999999999999999999 89999999888776654 554322222211     1122222 2589999997


Q ss_pred             C---C--hH-HHHHHHHHhcCCCcEEEEEccC
Q 019414          235 G---N--ID-NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       235 g---~--~~-~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +   .  +. .....++.++++ +.++.++..
T Consensus       239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d  269 (370)
T TIGR00518       239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAID  269 (370)
T ss_pred             ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecC
Confidence            3   2  11 136777888997 999998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.69  E-value=0.0007  Score=60.65  Aligned_cols=97  Identities=20%  Similarity=0.299  Sum_probs=70.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+++|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ .       +. .+.+.. ...|+||++++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~l-~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEKV-AEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHHh-ccCCEEEECCC
Confidence            57899999999999999999999998 89999999888777777765422 1       11 122221 25899999986


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCc
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDA  264 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~  264 (341)
                      ..-.-...++.++++ ..++.++......
T Consensus       219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~t  246 (287)
T TIGR02853       219 ALVLTADVLSKLPKH-AVIIDLASKPGGT  246 (287)
T ss_pred             hHHhCHHHHhcCCCC-eEEEEeCcCCCCC
Confidence            532234566778886 8888888655443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.66  E-value=0.00057  Score=64.60  Aligned_cols=92  Identities=24%  Similarity=0.278  Sum_probs=71.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .-.|.+++|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+      +  +.+.+     ...|+|+.+
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~------~--leell-----~~ADIVI~a  316 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV------T--LEDVV-----ETADIFVTA  316 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec------c--HHHHH-----hcCCEEEEC
Confidence            3478999999999999999999999999 89999888777655555565421      1  33222     248999999


Q ss_pred             cCChHHHH-HHHHHhcCCCcEEEEEccC
Q 019414          234 TGNIDNMI-SAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       234 ~g~~~~~~-~~~~~l~~~~g~~v~~g~~  260 (341)
                      .|....+. ..+..++++ +.++.+|..
T Consensus       317 tGt~~iI~~e~~~~MKpG-AiLINvGr~  343 (476)
T PTZ00075        317 TGNKDIITLEHMRRMKNN-AIVGNIGHF  343 (476)
T ss_pred             CCcccccCHHHHhccCCC-cEEEEcCCC
Confidence            98877765 889999997 999998865

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.61  E-value=0.00041  Score=62.33  Aligned_cols=98  Identities=21%  Similarity=0.275  Sum_probs=64.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      ..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++.    +....+.....+      ......++||+
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~------~~~~~~~~fDl  228 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY------LEQPIEGKADV  228 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc------cccccCCCceE
Confidence            45789999999877 777776665 5777999999999887777652    221100000000      11122347999


Q ss_pred             EEeccCCh---HHHHHHHHHhcCCCcEEEEEccC
Q 019414          230 SVECTGNI---DNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       230 vld~~g~~---~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      |+......   ..+..+.+.|+|+ |.+++.|..
T Consensus       229 Vvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~  261 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPG-GWLILSGIL  261 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence            98644322   3567788999998 999888754

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.58  E-value=0.00063  Score=68.63  Aligned_cols=114  Identities=23%  Similarity=0.307  Sum_probs=71.8

Q ss_pred             CcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Q 019414          109 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV  187 (341)
Q Consensus       109 g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v  187 (341)
                      -++++|..+++..++.+ +..+.+++..-.          .......+|.++||+|+ |++|++.++.+...|+ .|+.+
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~----------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~  452 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR----------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLA  452 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhc----------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEE
Confidence            35567887887777766 555556543110          00122336789999986 9999999999999999 89999


Q ss_pred             cCChhhHHHHH-HcCC-----ceecCCCCCChhHHHHHHHHh--cCCccEEEeccC
Q 019414          188 DRSSKRFEEAK-KFGV-----TDFVNTSEHDRPIQEVIAEMT--NGGVDRSVECTG  235 (341)
Q Consensus       188 ~~~~~~~~~~~-~~g~-----~~vv~~~~~~~~~~~~i~~~~--~~~~d~vld~~g  235 (341)
                      +++.++.+.+. +++.     ....|..+.+ .+.+.+.+..  .+++|++|++.|
T Consensus       453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG  507 (681)
T PRK08324        453 DLDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAG  507 (681)
T ss_pred             eCCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCC
Confidence            99888766543 3433     1123443322 1222232222  237999999988

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.58  E-value=0.00087  Score=55.06  Aligned_cols=104  Identities=22%  Similarity=0.356  Sum_probs=72.2

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCceecCCCCCChhHHHHHHHHhc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      +.+.+++||+.++=+|+|. |..++++++.....+|+++++++++.+..    ++||.+.+......   ..+.+.... 
T Consensus        27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~-  101 (187)
T COG2242          27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP-  101 (187)
T ss_pred             HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC-
Confidence            3567899999888788753 77788888655556999999999997765    45887754322221   222222211 


Q ss_pred             CCccEEEeccCC--hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          225 GGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       225 ~~~d~vld~~g~--~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                       .+|.+|---|.  .+.++.+|..|+++ |++|....
T Consensus       102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai  136 (187)
T COG2242         102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI  136 (187)
T ss_pred             -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence             59999865432  35788999999998 99988754

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.56  E-value=0.0044  Score=55.54  Aligned_cols=139  Identities=13%  Similarity=0.131  Sum_probs=88.0

Q ss_pred             cccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhc---CCCCCCEEEEECC-CHHHHHHHHHHH-HcCCCEE
Q 019414          110 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGL-GAVGLAAAEGAR-IAGASRI  184 (341)
Q Consensus       110 ~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~vlI~G~-g~~G~~a~~la~-~~g~~~v  184 (341)
                      .|-+|.++..+..+.-  .-...++..-| -+.|.|.. .+..   +.-..+.|+|.++ +-.++..+..++ ..+..++
T Consensus        90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            5667777776654421  11112222222 23444432 2221   2233456777776 788888888887 5555599


Q ss_pred             EEEcCChhhHHHHHHcCC-ceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          185 IGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       185 v~v~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      |.+ .|+.+.+..+.+|. +.|+.|++        +..+....--+++|..|+.+....+-+.+...--..+.+|...
T Consensus       166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  166 VGL-TSARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             EEE-ecCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            999 57777889999997 67776654        3344334567889999999888888888887534567777543

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.44  E-value=0.0034  Score=58.66  Aligned_cols=113  Identities=22%  Similarity=0.234  Sum_probs=76.9

Q ss_pred             ccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHH
Q 019414          137 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQ  216 (341)
Q Consensus       137 l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  216 (341)
                      +..+....+..+.+..++++|++||-+|+| .|..+..+++..|. +|++++.+++..+.+++......+.....+  +.
T Consensus       148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~~  223 (383)
T PRK11705        148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--YR  223 (383)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--hh
Confidence            333444555556677889999999999985 46777888888888 999999999999988874322111111111  21


Q ss_pred             HHHHHHhcCCccEEEe-----ccCC---hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          217 EVIAEMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       217 ~~i~~~~~~~~d~vld-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                          .. .+.||.|+.     .+|.   ...++.+.+.|+|+ |.+++...
T Consensus       224 ----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i  268 (383)
T PRK11705        224 ----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI  268 (383)
T ss_pred             ----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence                11 347998864     2332   34678889999998 99987654

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.38  E-value=0.00071  Score=53.48  Aligned_cols=73  Identities=26%  Similarity=0.386  Sum_probs=52.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc--eecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~--~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      ++.+++|+|+|++|.+++..+...|+++|+.+.|+.+|.+.+ ++++..  ..+.+++    +.+.+     ..+|+||+
T Consensus        11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI~   81 (135)
T PF01488_consen   11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVIN   81 (135)
T ss_dssp             TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEEE
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEEE
Confidence            578999999999999999999999998899999998886654 455332  2333322    22111     25999999


Q ss_pred             ccCCh
Q 019414          233 CTGNI  237 (341)
Q Consensus       233 ~~g~~  237 (341)
                      |++.+
T Consensus        82 aT~~~   86 (135)
T PF01488_consen   82 ATPSG   86 (135)
T ss_dssp             -SSTT
T ss_pred             ecCCC
Confidence            98764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.34  E-value=0.002  Score=58.54  Aligned_cols=102  Identities=23%  Similarity=0.263  Sum_probs=71.7

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHh
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      .+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++    +.|.+.+... ..+  ..+.+..  
T Consensus        73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD--~~~~~~~--  146 (322)
T PRK13943         73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGD--GYYGVPE--  146 (322)
T ss_pred             HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCC--hhhcccc--
Confidence            455678899999999997 59999999998763 37999999998766554    4666543222 112  2221111  


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          224 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       224 ~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      .+.+|+|+.+.+........++.|+++ |+++..
T Consensus       147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence            136999998887766677888999998 987763

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.31  E-value=0.004  Score=52.62  Aligned_cols=103  Identities=22%  Similarity=0.418  Sum_probs=70.3

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----HcC-CceecCCCCCChhHHHHHHHH
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFG-VTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~----~~g-~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      ....++.++++||.+|+|. |..++.+++..+. .+|++++.+++..+.++    .++ .+.+.... .+  ..+.+.. 
T Consensus        33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d--~~~~l~~-  107 (198)
T PRK00377         33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GE--APEILFT-  107 (198)
T ss_pred             HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-ec--hhhhHhh-
Confidence            3456888999999999987 8889999987642 48999999998887654    355 23222111 11  2222222 


Q ss_pred             hcCCccEEEeccCC---hHHHHHHHHHhcCCCcEEEEE
Q 019414          223 TNGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       223 ~~~~~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ..+.+|.||...+.   ...++.+.+.|+++ |+++..
T Consensus       108 ~~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        108 INEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             cCCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence            22479999975442   34678888999998 998864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.21  E-value=0.0023  Score=54.87  Aligned_cols=78  Identities=21%  Similarity=0.363  Sum_probs=58.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCC----ceecCCCCCChhHHHHHHHHhcC--Ccc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV----TDFVNTSEHDRPIQEVIAEMTNG--GVD  228 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~----~~vv~~~~~~~~~~~~i~~~~~~--~~d  228 (341)
                      +..++|+|+ +++|.+.++.....|+ +|+.+.|++++++.+ .+++.    ...+|-.+.+ .....+..+...  .+|
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRID   83 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCccc
Confidence            467889997 8999999999999999 999999999998765 45772    2234544432 245555555555  699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++++..|-
T Consensus        84 iLvNNAGl   91 (246)
T COG4221          84 ILVNNAGL   91 (246)
T ss_pred             EEEecCCC
Confidence            99998773

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.10  E-value=0.0033  Score=52.25  Aligned_cols=77  Identities=23%  Similarity=0.355  Sum_probs=56.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC---ceecCCCCCC--hhHHHHHHHHhcCCccEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---TDFVNTSEHD--RPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~---~~vv~~~~~~--~~~~~~i~~~~~~~~d~v  230 (341)
                      |.+|||+|+ +++|++.++-...+|- +||.+.|++++++.++..-.   +.|.|..+.+  .++.+.+++..+ ..+++
T Consensus         5 gnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNvl   82 (245)
T COG3967           5 GNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNVL   82 (245)
T ss_pred             CcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhee
Confidence            678999975 8999999988889998 99999999999999887544   3455554433  224444444333 47888


Q ss_pred             EeccC
Q 019414          231 VECTG  235 (341)
Q Consensus       231 ld~~g  235 (341)
                      +++.|
T Consensus        83 iNNAG   87 (245)
T COG3967          83 INNAG   87 (245)
T ss_pred             eeccc
Confidence            88877

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.09  E-value=0.01  Score=49.73  Aligned_cols=101  Identities=19%  Similarity=0.175  Sum_probs=62.9

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcC-Ccc
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNG-GVD  228 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~-~~d  228 (341)
                      ...+++|++||.+|+|.-++......+..+..+|++++.++++    ...++..+ .|..+.  ...+.+++..+. ++|
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~--~~~~~l~~~~~~~~~D  100 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDE--EVLNKIRERVGDDKVD  100 (188)
T ss_pred             hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCCh--hHHHHHHHHhCCCCcc
Confidence            3457899999999987645433333333344489999998864    11233322 133222  244455555555 899


Q ss_pred             EEEe-cc----CC------------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          229 RSVE-CT----GN------------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       229 ~vld-~~----g~------------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|+. ..    |.            ...+..+.+.|+++ |+++...
T Consensus       101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~  146 (188)
T TIGR00438       101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV  146 (188)
T ss_pred             EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence            9994 32    21            34677889999998 9998854

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.04  E-value=0.00092  Score=56.86  Aligned_cols=101  Identities=22%  Similarity=0.311  Sum_probs=66.1

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHH----HHHcCCcee-cCCCCCChhHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEE----AKKFGVTDF-VNTSEHDRPIQEVIAE  221 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~-~vv~v~~~~~~~~~----~~~~g~~~v-v~~~~~~~~~~~~i~~  221 (341)
                      +.+...++||++||-+|+|. |..++.+++..|.. .|++++..++-.+.    +++++.+.+ +...+..       ..
T Consensus        64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~-------~g  135 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGS-------EG  135 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GG-------GT
T ss_pred             HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchh-------hc
Confidence            45677899999999999764 78888888887743 79999988865443    445666543 2121111       01


Q ss_pred             Hhc-CCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          222 MTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       222 ~~~-~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      +.. ++||.|+-+.+.++.....++.|+++ |+++.-
T Consensus       136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p  171 (209)
T PF01135_consen  136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP  171 (209)
T ss_dssp             TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred             cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence            112 37999998877766778899999998 988874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.01  E-value=0.0092  Score=49.95  Aligned_cols=79  Identities=18%  Similarity=0.280  Sum_probs=59.7

Q ss_pred             CCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCc-eecCCCCCC--hhHHHHHHHHhcCCccEE
Q 019414          157 GSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHD--RPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       157 g~~vlI~G~--g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~vv~~~~~~--~~~~~~i~~~~~~~~d~v  230 (341)
                      ...|||+|+  |++|.+.+.-....|+ .|+++.++-+++.-+. ++|.. .-+|..+++  ..+...+++.++|+.|+.
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L   85 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL   85 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence            356899974  9999999888889999 9999999999988776 77763 234443332  236667777777899999


Q ss_pred             EeccCC
Q 019414          231 VECTGN  236 (341)
Q Consensus       231 ld~~g~  236 (341)
                      ++..|.
T Consensus        86 ~NNAG~   91 (289)
T KOG1209|consen   86 YNNAGQ   91 (289)
T ss_pred             EcCCCC
Confidence            986663

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.01  E-value=0.016  Score=50.13  Aligned_cols=102  Identities=23%  Similarity=0.359  Sum_probs=64.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc---CCcee--cCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTDF--VNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~v--v~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      .+.+|+|+|+ |.+|..+++.+...|+ .|+.+++++++.+.+ +++   +....  .|..+.+ .+.+.+.+...  ++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTE-SARNVIEKAAKVLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence            3678999987 9999999999999999 888888988876554 222   22122  2333322 12222222221  36


Q ss_pred             ccEEEeccCChH-----------------------HHHHHHHHhcCCCcEEEEEccC
Q 019414          227 VDRSVECTGNID-----------------------NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       227 ~d~vld~~g~~~-----------------------~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +|.++.+.+...                       .++.+++++.++ |+++.++..
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  137 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM  137 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence            899998876311                       134455566666 888888754

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.0089  Score=53.25  Aligned_cols=79  Identities=16%  Similarity=0.291  Sum_probs=55.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCCh--hHHHHHHHHhcCCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDR--PIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~--~~~~~i~~~~~~~~d~vl  231 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+.+...+ .|..+.+.  .+.+.+.+...+.+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            3568999987 9999999998888899 89999999888877776665433 34443320  122223233335799999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      ++.|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9876

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.90  E-value=0.0034  Score=47.49  Aligned_cols=94  Identities=22%  Similarity=0.245  Sum_probs=62.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcC----C-ceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFG----V-TDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~-~g~~~vv~v~~~~~~~~~~~~~g----~-~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      |+.+||-+|+|. |..++.+++. .+. +|++++.+++..+.+++.-    . +++ .....+  +  .......++||+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i-~~~~~d--~--~~~~~~~~~~D~   73 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRI-TFVQGD--A--EFDPDFLEPFDL   73 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTE-EEEESC--C--HGGTTTSSCEEE
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCe-EEEECc--c--ccCcccCCCCCE
Confidence            688999999865 7888888885 566 9999999999988877532    2 222 111112  2  011112237999


Q ss_pred             EEecc-CC---h------HHHHHHHHHhcCCCcEEEEE
Q 019414          230 SVECT-GN---I------DNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       230 vld~~-g~---~------~~~~~~~~~l~~~~g~~v~~  257 (341)
                      |+... ..   .      ..++.+.+.|+|+ |+++..
T Consensus        74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            98765 21   1      2378899999997 988764

...

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.88  E-value=0.0036  Score=55.62  Aligned_cols=103  Identities=24%  Similarity=0.271  Sum_probs=62.6

Q ss_pred             hhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH
Q 019414          147 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       147 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      .+.++++++||++||-+|+| -|..++.+|+..|+ +|++++.+++..+.+++    .|....+.....+  +    +++
T Consensus        53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D--~----~~~  124 (273)
T PF02353_consen   53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD--Y----RDL  124 (273)
T ss_dssp             HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---G----GG-
T ss_pred             HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee--c----ccc
Confidence            35678899999999999987 46778888998899 99999999999887654    5543211111111  1    122


Q ss_pred             hcCCccEEEe-----ccCC---hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 TNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~~~~~d~vld-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      . ..||.|+-     .+|.   +..++.+.+.|+|+ |++++-..
T Consensus       125 ~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i  167 (273)
T PF02353_consen  125 P-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI  167 (273)
T ss_dssp             ---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred             C-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            1 26898764     3432   24578889999998 99876543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK06182 short chain dehydrogenase; Validated

Probab=96.85  E-value=0.008  Score=53.35  Aligned_cols=78  Identities=21%  Similarity=0.363  Sum_probs=54.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEEe
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vld  232 (341)
                      +.+++|+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.++.. ..|..+.+ .+.+.+.+...  +++|++|+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEA-SIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEE
Confidence            568999987 9999999999888999 8999989888876665555433 23443322 13333333322  37999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus        81 ~ag~   84 (273)
T PRK06182         81 NAGY   84 (273)
T ss_pred             CCCc
Confidence            8873

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.84  E-value=0.012  Score=54.45  Aligned_cols=97  Identities=18%  Similarity=0.232  Sum_probs=65.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC---C-ceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---V-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g---~-~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .+|||+|+|.+|+.+++.+.+.+-.+|+.++++.++.+.+....   . ...+|..+.+     ++.++.. ++|+||++
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~-----al~~li~-~~d~VIn~   75 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVD-----ALVALIK-DFDLVINA   75 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChH-----HHHHHHh-cCCEEEEe
Confidence            46899999999999999988888459999999999888877654   2 2345554432     2222222 35999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      .+..-....+-.|+..+ =.++.+....
T Consensus        76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~  102 (389)
T COG1748          76 APPFVDLTILKACIKTG-VDYVDTSYYE  102 (389)
T ss_pred             CCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence            97754544343455554 4556665443

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.83  E-value=0.05  Score=48.14  Aligned_cols=107  Identities=23%  Similarity=0.306  Sum_probs=77.2

Q ss_pred             hhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-ee----cCCCCCC
Q 019414          142 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF----VNTSEHD  212 (341)
Q Consensus       142 ~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~v----v~~~~~~  212 (341)
                      ..++..+.++.+++||++||=+|+|- |.+++-.|+..|+ +|++++-|++..+.+++    .|.. .+    .|+++  
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd--  133 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD--  133 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc--
Confidence            44455567889999999999999875 7778888999999 99999999999887665    4544 11    12222  


Q ss_pred             hhHHHHHHHHhcCCccEEE-----eccCC---hHHHHHHHHHhcCCCcEEEEEccCCCC
Q 019414          213 RPIQEVIAEMTNGGVDRSV-----ECTGN---IDNMISAFECVHDGWGVAVLVGVPSKD  263 (341)
Q Consensus       213 ~~~~~~i~~~~~~~~d~vl-----d~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~  263 (341)
                               .. +.||.|+     +.+|.   +..+..+.++|+|+ |++.+-.....+
T Consensus       134 ---------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~  181 (283)
T COG2230         134 ---------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD  181 (283)
T ss_pred             ---------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence                     11 2477765     34443   34678899999998 999887765544

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.83  E-value=0.0065  Score=51.95  Aligned_cols=101  Identities=25%  Similarity=0.313  Sum_probs=67.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCce--ecCCCCCChhHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIA  220 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~i~  220 (341)
                      +....+++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++    .|...  ++..+...     .. 
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~-----~~-  140 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL-----GY-  140 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc-----CC-
Confidence            34567889999999998764 6677778877653 399999999988776654    44432  12111100     00 


Q ss_pred             HHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          221 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       221 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                       ...++||+|+-........+..++.|+++ |+++..
T Consensus       141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence             01237999875544456677889999998 998775

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.82  E-value=0.013  Score=44.87  Aligned_cols=101  Identities=20%  Similarity=0.318  Sum_probs=67.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCcee--cCCCCCChhHHHHHHHHh
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v--v~~~~~~~~~~~~i~~~~  223 (341)
                      ....+.++++|+-+|+|. |..+..+++..+..+|++++.++...+.+++    ++...+  +..+     ...... ..
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~-----~~~~~~-~~   85 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD-----APEALE-DS   85 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc-----ccccCh-hh
Confidence            445667788899999876 8888889988754599999999988777653    443322  1111     110011 11


Q ss_pred             cCCccEEEeccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          224 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 ~~~~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .+.+|+|+-..+.   .+.++.+.+.|+++ |++++..
T Consensus        86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence            2379999865432   24688899999998 9988753

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.76  E-value=0.006  Score=50.11  Aligned_cols=97  Identities=24%  Similarity=0.256  Sum_probs=64.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC-CCCC------------------ChhHHH
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEH------------------DRPIQE  217 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~-~~~~------------------~~~~~~  217 (341)
                      .-+|+|+|+|.+|+.|+.+++.+|+ +++..+...++.+..+..+...+.. +.+.                  ...+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            3779999999999999999999999 8999999999988888888755432 1111                  111332


Q ss_pred             HHHHHhcCCccEEEecc--CC---hH-HHHHHHHHhcCCCcEEEEEccC
Q 019414          218 VIAEMTNGGVDRSVECT--GN---ID-NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       218 ~i~~~~~~~~d~vld~~--g~---~~-~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      .+.     .+|++|-+.  .+   +. ..++.++.++++ ..++.+...
T Consensus        99 ~i~-----~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D  141 (168)
T PF01262_consen   99 FIA-----PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD  141 (168)
T ss_dssp             HHH-----H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred             HHh-----hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence            222     378888532  11   11 234566778886 888888653

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.75  E-value=0.018  Score=47.61  Aligned_cols=92  Identities=23%  Similarity=0.306  Sum_probs=61.3

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccCC-
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN-  236 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-  236 (341)
                      |+|+|+ |.+|...++.+...|+ +|+++.+++++.+.  ..+++.+ .|..  +  . +.+.+... ++|.||.+.|. 
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~--d--~-~~~~~al~-~~d~vi~~~~~~   71 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLF--D--P-DSVKAALK-GADAVIHAAGPP   71 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTT--C--H-HHHHHHHT-TSSEEEECCHST
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeeh--h--h-hhhhhhhh-hcchhhhhhhhh
Confidence            689997 9999999999999997 99999999998776  4444433 2332  2  2 23333332 69999999974 


Q ss_pred             ---hHHHHHHHHHhcCC-CcEEEEEccC
Q 019414          237 ---IDNMISAFECVHDG-WGVAVLVGVP  260 (341)
Q Consensus       237 ---~~~~~~~~~~l~~~-~g~~v~~g~~  260 (341)
                         .......++.+... -.+++.++..
T Consensus        72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~   99 (183)
T PF13460_consen   72 PKDVDAAKNIIEAAKKAGVKRVVYLSSA   99 (183)
T ss_dssp             TTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred             cccccccccccccccccccccceeeecc
Confidence               23344555555432 1477776644

...

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.74  E-value=0.018  Score=49.75  Aligned_cols=103  Identities=22%  Similarity=0.261  Sum_probs=73.6

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      ....++.||++|+=.|.|+ |.+++-||+..|. .+|+..+..++..+.+++    +|....+.....|      +.+..
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D------v~~~~  159 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD------VREGI  159 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc------ccccc
Confidence            4678999999999888764 8888899998864 699999999988776553    4543322121121      12222


Q ss_pred             cC-CccEEE-eccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 NG-GVDRSV-ECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~~-~~d~vl-d~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .+ .+|++| |---..+.++.+.+.|.++ |.++.+..
T Consensus       160 ~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P  196 (256)
T COG2519         160 DEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP  196 (256)
T ss_pred             cccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence            22 688875 7665667899999999998 99988863

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.011  Score=52.46  Aligned_cols=75  Identities=21%  Similarity=0.388  Sum_probs=53.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhc--CCccEEEecc
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSVECT  234 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~--~~~d~vld~~  234 (341)
                      ++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.+.+...+ .|..+.+ .+.+.+.....  +++|++|++.
T Consensus         3 ~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          3 VVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGA-ALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEECC
Confidence            6899987 9999999999888999 89999898888777666665433 4444322 23333333322  3799999998


Q ss_pred             C
Q 019414          235 G  235 (341)
Q Consensus       235 g  235 (341)
                      |
T Consensus        81 g   81 (274)
T PRK05693         81 G   81 (274)
T ss_pred             C
Confidence            7

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.69  E-value=0.012  Score=50.10  Aligned_cols=101  Identities=17%  Similarity=0.188  Sum_probs=66.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCce---ecCCCCCChhHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVI  219 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~i  219 (341)
                      +.+...++++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++    .+...   ++..+     ..+.+
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d-----~~~~~  137 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD-----GKRGL  137 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC-----cccCC
Confidence            34566788999999998764 777777777764 2389999999887665543    44321   22111     11111


Q ss_pred             HHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          220 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      .  ..+.||.|+-+.......+.+++.|+++ |+++..
T Consensus       138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence            0  1237999986655545667888999998 998764

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.66  E-value=0.022  Score=48.55  Aligned_cols=105  Identities=20%  Similarity=0.268  Sum_probs=72.3

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCC-CChhHHHHHHHHh
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSE-HDRPIQEVIAEMT  223 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~-~~~~~~~~i~~~~  223 (341)
                      ..++.....+||=+|++ +|..++++|..+. -.++++++.++++.+.+++    .|.+..+.... .+  ..+.+.+..
T Consensus        53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence            34556677888888863 4777888888775 3489999999999877654    67654221111 23  555555544


Q ss_pred             cCCccEEE-ecc--CChHHHHHHHHHhcCCCcEEEEEc
Q 019414          224 NGGVDRSV-ECT--GNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 ~~~~d~vl-d~~--g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .+.||.|| |+-  -.++.++.++++|+++ |.++.=+
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN  166 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADN  166 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence            45899997 542  2467899999999997 8877654

>PRK12742 oxidoreductase; Provisional

Probab=96.65  E-value=0.046  Score=47.14  Aligned_cols=77  Identities=25%  Similarity=0.329  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH-HHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE-AKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~-~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+.+ ++++.+. .++++...+ .|..+.+ .+.+.+.+  .+++|++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~-~~~~~~~~--~~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADRD-AVIDVVRK--SGALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCHH-HHHHHHHH--hCCCcEEE
Confidence            3678999987 9999999999998999 6666544 4444433 344555432 3333221 13333322  13699999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      ++.|.
T Consensus        81 ~~ag~   85 (237)
T PRK12742         81 VNAGI   85 (237)
T ss_pred             ECCCC
Confidence            98764

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.62  E-value=0.02  Score=47.45  Aligned_cols=89  Identities=31%  Similarity=0.404  Sum_probs=60.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -.|.+|.|+|.|.+|+..+++++.+|. +|++.+++.+........+...    .+    +.+.+.+     .|+|+.+.
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~~----l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----VS----LDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----SS----HHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----ee----hhhhcch-----hhhhhhhh
Confidence            368999999999999999999999999 9999999888776455555421    11    4444433     68888776


Q ss_pred             CC-hH----HHHHHHHHhcCCCcEEEEEc
Q 019414          235 GN-ID----NMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       235 g~-~~----~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .. ++    .-...++.++++ ..++.++
T Consensus       100 plt~~T~~li~~~~l~~mk~g-a~lvN~a  127 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPG-AVLVNVA  127 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTT-EEEEESS
T ss_pred             ccccccceeeeeeeeeccccc-eEEEecc
Confidence            52 21    123567777776 6666665

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK08017 oxidoreductase; Provisional

Probab=96.58  E-value=0.017  Score=50.61  Aligned_cols=77  Identities=18%  Similarity=0.319  Sum_probs=54.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCCh--hHHHHHHHHhcCCccEEEec
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDR--PIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~--~~~~~i~~~~~~~~d~vld~  233 (341)
                      .++||+|+ |++|.+.++.+...|+ +|+++.++.++.+.+++.++..+ .|..+.+.  .+.+.+.+...+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            46999997 9999999999998999 88999999988888777776433 34333210  12333333333578888888


Q ss_pred             cC
Q 019414          234 TG  235 (341)
Q Consensus       234 ~g  235 (341)
                      .|
T Consensus        82 ag   83 (256)
T PRK08017         82 AG   83 (256)
T ss_pred             CC
Confidence            76

>PRK04148 hypothetical protein; Provisional

Probab=96.56  E-value=0.083  Score=41.33  Aligned_cols=95  Identities=18%  Similarity=0.184  Sum_probs=65.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC-CCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~-~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .++.+++++|.| .|...++.+...|. .|++++.+++..+.+++.+...+.+ --+++..+.        +++|++...
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y--------~~a~liysi   84 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIY--------KNAKLIYSI   84 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHH--------hcCCEEEEe
Confidence            456789999998 78755656667898 9999999999999999988765442 223321111        368999988


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      -..++...-+++....-+.-++..-.
T Consensus        85 rpp~el~~~~~~la~~~~~~~~i~~l  110 (134)
T PRK04148         85 RPPRDLQPFILELAKKINVPLIIKPL  110 (134)
T ss_pred             CCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence            77766666666666655344444443

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.013  Score=53.72  Aligned_cols=79  Identities=23%  Similarity=0.385  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      ++.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.    +++.|.+.   ..|..+.+.  .+.+.+.+. .+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF-GG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh-cC
Confidence            4678999987 9999999999999999 78888898887653    33455543   234433220  122222222 24


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>PRK00536 speE spermidine synthase; Provisional

Probab=96.55  E-value=0.01  Score=52.19  Aligned_cols=99  Identities=10%  Similarity=-0.035  Sum_probs=66.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEE-eccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV-ECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl-d~~g  235 (341)
                      ..+|||+|+|- |.++-.++|.-  .+|+.++-+++=.+.++++-...--..+++.-.+...+.+...+.||+|| |..-
T Consensus        73 pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs~~  149 (262)
T PRK00536         73 LKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQEP  149 (262)
T ss_pred             CCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcCCC
Confidence            47899998754 45566788875  39999999999999999843321101122221122233333335799976 7666


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +++-.+.+.++|+++ |.++....
T Consensus       150 ~~~fy~~~~~~L~~~-Gi~v~Qs~  172 (262)
T PRK00536        150 DIHKIDGLKRMLKED-GVFISVAK  172 (262)
T ss_pred             ChHHHHHHHHhcCCC-cEEEECCC
Confidence            667788999999998 99888754

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.54  E-value=0.019  Score=49.29  Aligned_cols=77  Identities=9%  Similarity=0.164  Sum_probs=51.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+++++-..  .+|..+.+ .+.+....+..+++|++|.+.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPA-SLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHH-HHHHHHHHhhcCCCCEEEEcC
Confidence            36899987 9999998888888899 8999998887776665543222  23333322 133333333334799999887


Q ss_pred             CC
Q 019414          235 GN  236 (341)
Q Consensus       235 g~  236 (341)
                      |.
T Consensus        80 g~   81 (225)
T PRK08177         80 GI   81 (225)
T ss_pred             cc
Confidence            53

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.53  E-value=0.019  Score=50.38  Aligned_cols=79  Identities=22%  Similarity=0.315  Sum_probs=55.8

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCce---ecCCCCCChhHHHHHHH-Hhc
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD---FVNTSEHDRPIQEVIAE-MTN  224 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~~---vv~~~~~~~~~~~~i~~-~~~  224 (341)
                      ..+.++||+|+ +++|...+..+...|+ .++.+.|+++|++.+.+ +    |...   .+|..+.+  -.+.+.+ +..
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~--~~~~l~~~l~~   80 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE--ALERLEDELKE   80 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh--HHHHHHHHHHh
Confidence            45678999998 9999999999999999 99999999999876543 2    2221   24544443  3333333 222


Q ss_pred             C--CccEEEeccCC
Q 019414          225 G--GVDRSVECTGN  236 (341)
Q Consensus       225 ~--~~d~vld~~g~  236 (341)
                      .  .+|+.+++.|.
T Consensus        81 ~~~~IdvLVNNAG~   94 (265)
T COG0300          81 RGGPIDVLVNNAGF   94 (265)
T ss_pred             cCCcccEEEECCCc
Confidence            2  79999999884

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.50  E-value=0.046  Score=52.40  Aligned_cols=78  Identities=24%  Similarity=0.356  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hh-HHHHHHcCCce-ecCCCCCChhHHHHHHHHh--cCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KR-FEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~--~~-~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~--~~~~d  228 (341)
                      ++.++||+|+ |++|.+.++.+...|+ +|+.+++++  ++ .+..++++... .+|..+.+ ...+.+....  .+++|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCCC
Confidence            5788999987 9999999999989999 788887643  22 22334455432 23444332 1222222221  13699


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus       287 ~vi~~AG  293 (450)
T PRK08261        287 IVVHNAG  293 (450)
T ss_pred             EEEECCC
Confidence            9999987

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.025  Score=49.02  Aligned_cols=77  Identities=23%  Similarity=0.380  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      ++.+++|+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+... ..|..+.+  ......+. .+++|++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~--~v~~~~~~-~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDA--AIRAALAA-AGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH--HHHHHHHH-hCCCCEEEE
Confidence            4678999987 9999999999999999 7888988887765543 344432 23443321  22222221 136999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus        84 ~ag~   87 (245)
T PRK07060         84 CAGI   87 (245)
T ss_pred             CCCC
Confidence            8874

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.47  E-value=0.033  Score=48.19  Aligned_cols=108  Identities=19%  Similarity=0.281  Sum_probs=75.2

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .......+|++||=+|+| +|-.+..+++..|-..|++++.+++.++.+++-    |... +.+...+  .. .+ -+.+
T Consensus        44 i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d--Ae-~L-Pf~D  117 (238)
T COG2226          44 ISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD--AE-NL-PFPD  117 (238)
T ss_pred             HHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec--hh-hC-CCCC
Confidence            344556699999988765 488999999999866999999999998877653    2221 1111221  11 11 1233


Q ss_pred             CCccEEEeccC------ChHHHHHHHHHhcCCCcEEEEEccCCCC
Q 019414          225 GGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPSKD  263 (341)
Q Consensus       225 ~~~d~vld~~g------~~~~~~~~~~~l~~~~g~~v~~g~~~~~  263 (341)
                      ..||+|.-+.|      -+..+.+..+.|+|+ |+++.+......
T Consensus       118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p~  161 (238)
T COG2226         118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKPD  161 (238)
T ss_pred             CccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCCC
Confidence            47899877665      245799999999998 999999876543

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.42  E-value=0.028  Score=46.98  Aligned_cols=98  Identities=17%  Similarity=0.184  Sum_probs=62.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      .++++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++    .+.+. +.....+  ..+ +. . .+.+|
T Consensus        42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d--~~~-~~-~-~~~fD  114 (187)
T PRK00107         42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGR--AEE-FG-Q-EEKFD  114 (187)
T ss_pred             hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEecc--Hhh-CC-C-CCCcc
Confidence            345689999998753 5666666665543499999999987766553    45433 1111111  211 11 1 33799


Q ss_pred             EEEec-cCC-hHHHHHHHHHhcCCCcEEEEEc
Q 019414          229 RSVEC-TGN-IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       229 ~vld~-~g~-~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|+-. .+. ...++++.+.|+++ |+++.+-
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            99843 222 35677889999998 9998874

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.064  Score=46.26  Aligned_cols=79  Identities=23%  Similarity=0.386  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC----Cce-ecCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG----VTD-FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g----~~~-vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      .+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++.    ... ..|..+.+ .+.+.+.+...  ++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEA-DVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHH-HHHHHHHHHHHHcCC
Confidence            3578999987 9999999888887899 799998888765543 3332    111 12333221 13333333322  36


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998763

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.37  E-value=0.015  Score=54.77  Aligned_cols=76  Identities=11%  Similarity=0.178  Sum_probs=53.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.+.+++|+|+|.+|.+++..+...|+..++.+.++.++.+. +++++...++.       + +.+.+.. ..+|+||.|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~l-~~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQLI-KKADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHHh-ccCCEEEEC
Confidence            357789999999999999999999998889999999877554 45565212221       2 1122211 248999999


Q ss_pred             cCChHH
Q 019414          234 TGNIDN  239 (341)
Q Consensus       234 ~g~~~~  239 (341)
                      ++++..
T Consensus       250 T~a~~~  255 (414)
T PRK13940        250 VNVLEY  255 (414)
T ss_pred             cCCCCe
Confidence            988654

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.36  E-value=0.031  Score=54.20  Aligned_cols=74  Identities=24%  Similarity=0.217  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .+.++++|+|+|.|..|++++++++..|+ .|++.+.++++.+.+++.|+..+. ...    ..+.+     ..+|+|+.
T Consensus         8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~~----~~~~l-----~~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TSD----AVQQI-----ADYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Ccc----hHhHh-----hcCCEEEE
Confidence            45578999999999999999999999999 899999877766667777874432 111    11112     24799999


Q ss_pred             ccCCh
Q 019414          233 CTGNI  237 (341)
Q Consensus       233 ~~g~~  237 (341)
                      +.|-+
T Consensus        77 SpGi~   81 (488)
T PRK03369         77 SPGFR   81 (488)
T ss_pred             CCCCC
Confidence            88754

>PLN02366 spermidine synthase

Probab=96.35  E-value=0.024  Score=51.21  Aligned_cols=100  Identities=20%  Similarity=0.140  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ecC-----CCCCChhHHHHHHHHhcCCc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVN-----TSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv~-----~~~~~~~~~~~i~~~~~~~~  227 (341)
                      ...++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.+++.-...  .++     ....|  ..+.+++..++.+
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~D--a~~~l~~~~~~~y  166 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGD--GVEFLKNAPEGTY  166 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEECh--HHHHHhhccCCCC
Confidence            4468899998765 556677788766679999999998888887742110  000     00011  3333433334479


Q ss_pred             cEEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          228 DRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       228 d~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      |+|| |+..         +.+.++.+.++|+|+ |.++...
T Consensus       167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            9987 4332         124577889999998 9997654

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.34  E-value=0.011  Score=50.71  Aligned_cols=103  Identities=19%  Similarity=0.260  Sum_probs=65.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      +.+...++++++||-+|+|. |..++.+++..+. ..|++++.+++..+.+++    +|.+.+. ....+  ..+..  .
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~-~~~~d--~~~~~--~  142 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVI-VIVGD--GTQGW--E  142 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeE-EEECC--cccCC--c
Confidence            34566789999999998764 6666777777653 369999999887766543    4543221 11111  11100  0


Q ss_pred             hcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          223 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       223 ~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ..+.||+|+-........+.+.+.|+++ |+++..
T Consensus       143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence            1137999875443445667888999998 998765

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.34  E-value=0.061  Score=52.44  Aligned_cols=47  Identities=23%  Similarity=0.191  Sum_probs=38.9

Q ss_pred             hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019414          150 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  197 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~  197 (341)
                      ...+.+.|.+|||+|+ |.+|...++.+...|+ +|+++.++.++.+.+
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l  120 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL  120 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence            3456678899999987 9999999999888999 888888888876543

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.34  E-value=0.031  Score=48.96  Aligned_cols=79  Identities=20%  Similarity=0.285  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRS  230 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~v  230 (341)
                      +|.+|||+|+ |++|.+.++.+...|+ +|+.+++++.+.+.. ++++... ..|..+.+ .+.+.+.+...  +++|++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            4688999987 9999999999988998 888888887765543 4454422 23443322 12222222211  368999


Q ss_pred             EeccCC
Q 019414          231 VECTGN  236 (341)
Q Consensus       231 ld~~g~  236 (341)
                      +++.|.
T Consensus        84 i~~ag~   89 (255)
T PRK06057         84 FNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998763

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.035  Score=47.57  Aligned_cols=77  Identities=16%  Similarity=0.302  Sum_probs=52.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+++|+|+ |++|...++.+...|+ +|+.++++.++.+.++..+... ..|..+.+ .+.+.+.+...+++|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence            36889986 9999999888877898 8888889888877776666532 33444332 2333222333337999999876


Q ss_pred             C
Q 019414          236 N  236 (341)
Q Consensus       236 ~  236 (341)
                      .
T Consensus        80 ~   80 (222)
T PRK06953         80 V   80 (222)
T ss_pred             c
Confidence            4

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.25  E-value=0.01  Score=56.90  Aligned_cols=92  Identities=10%  Similarity=0.078  Sum_probs=58.1

Q ss_pred             hhcCCCCCCEEE----EECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHh
Q 019414          150 NVAKPERGSSVA----VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       150 ~~~~~~~g~~vl----I~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~  223 (341)
                      ...++++|+++|    |+|+ |++|.+++|+++..|+ .|+++.+.+++....+..+.. .++|.+...  +.+.+....
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~l~~~~  103 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGIT--DPADLKALY  103 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCC--CHHHHHHHH
Confidence            456788899888    8865 9999999999999999 888887666644333333443 344444322  222222211


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                                    ..++.+++.+.++ |+++.++.
T Consensus       104 --------------~~~~~~l~~l~~~-griv~i~s  124 (450)
T PRK08261        104 --------------EFFHPVLRSLAPC-GRVVVLGR  124 (450)
T ss_pred             --------------HHHHHHHHhccCC-CEEEEEcc
Confidence                          2344556666665 77776654

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.24  E-value=0.11  Score=43.75  Aligned_cols=106  Identities=20%  Similarity=0.329  Sum_probs=63.5

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +....+++++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    ++...+. ....+  ..+.+....
T Consensus        32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~-~~~~d--~~~~~~~~~  107 (196)
T PRK07402         32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVE-VIEGS--APECLAQLA  107 (196)
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeE-EEECc--hHHHHhhCC
Confidence            34556778899988887643 4455666665533499999999988776654    5543221 11111  222222221


Q ss_pred             cCCccEE-EeccCC-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 NGGVDRS-VECTGN-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~~~~d~v-ld~~g~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                       ..+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus       108 -~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        108 -PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             -CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence             224444 443222 35788999999998 99888753

>PRK00811 spermidine synthase; Provisional

Probab=96.24  E-value=0.031  Score=50.03  Aligned_cols=97  Identities=16%  Similarity=0.157  Sum_probs=62.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC---------ceecCCCCCChhHHHHHHHHhcCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---------TDFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~---------~~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      ..++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-.         .++ .....|  ..+.+.. ..+.
T Consensus        76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv-~v~~~D--a~~~l~~-~~~~  150 (283)
T PRK00811         76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRV-ELVIGD--GIKFVAE-TENS  150 (283)
T ss_pred             CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCce-EEEECc--hHHHHhh-CCCc
Confidence            457899998765 6667777777677799999999999888877311         111 001111  3333333 3458


Q ss_pred             ccEEEeccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          227 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       227 ~d~vld~~g~----------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|+|+--...          .+.++.+.+.|+++ |.++...
T Consensus       151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            9998742211          23467788999998 9988753

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.17  E-value=0.21  Score=42.41  Aligned_cols=116  Identities=18%  Similarity=0.117  Sum_probs=68.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .|.+|||+|+|.+|..-++.+...|+ .|++++.... ..+.+.+.|--..+ ..+..    ..  .+  .++++||-++
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~----~~--dl--~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARCFD----AD--IL--EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCCCC----HH--Hh--CCcEEEEECC
Confidence            36789999999999999999999999 7887765432 22223333311111 11211    11  11  3689999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEe
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT  282 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~  282 (341)
                      +.++.-.......... +..+..........+.++...-..++++.-+
T Consensus        78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~~~~g~l~iais  124 (205)
T TIGR01470        78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSIVDRSPVVVAIS  124 (205)
T ss_pred             CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeEEEcCCEEEEEE
Confidence            8865666677677665 7777665443333343332222234555433

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.037  Score=48.41  Aligned_cols=79  Identities=23%  Similarity=0.340  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-e--ecCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~--vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .+.+++|+|+ |.+|.+++..+...|+ +|+.+.+++++.+.+.+    .+.. .  ..|..+.+ .+.+.+.+..  .+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   85 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQ-SIKAAVAHAETEAG   85 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHhcC
Confidence            4688999987 9999999999988999 89999888877654332    1221 1  22333321 1333333221  13


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.15  E-value=0.014  Score=50.87  Aligned_cols=108  Identities=22%  Similarity=0.249  Sum_probs=66.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHH-HHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQ-EVIAE  221 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~-~~i~~  221 (341)
                      +....+++||++|+=-|.|+ |.++..+++..| -.+|+..+.++++.+.+++    .|....+.....|  +. +...+
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~  108 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE  108 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence            45668999999999887653 777778888765 3499999999999776654    5654222111111  11 01111


Q ss_pred             HhcCCccEEE-eccCChHHHHHHHHHh-cCCCcEEEEEcc
Q 019414          222 MTNGGVDRSV-ECTGNIDNMISAFECV-HDGWGVAVLVGV  259 (341)
Q Consensus       222 ~~~~~~d~vl-d~~g~~~~~~~~~~~l-~~~~g~~v~~g~  259 (341)
                      -....+|.|| |--...+.++.+.+.| +++ |+++.+..
T Consensus       109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP  147 (247)
T PF08704_consen  109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP  147 (247)
T ss_dssp             T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred             cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence            1123688876 6655557899999999 887 99988853

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.15  E-value=0.067  Score=47.42  Aligned_cols=110  Identities=21%  Similarity=0.293  Sum_probs=66.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-e----cCCCCCChhHHHHHHHH--h
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F----VNTSEHDRPIQEVIAEM--T  223 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v----v~~~~~~~~~~~~i~~~--~  223 (341)
                      .|..|+|+|+ +++|.+.+.-.-..|+ .++.+.+..++++.+    ++.+... +    .|-++.+ +..+.+...  .
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~-~~~~~~~~~~~~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEE-SVKKFVEWAIRH   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHH-HHHHHHHHHHHh
Confidence            4677899998 8999988887778898 555555777665554    4455433 2    2333222 133333222  1


Q ss_pred             cCCccEEEeccCCh-------------------------HHHHHHHHHhcCCC-cEEEEEccCCCCcccc
Q 019414          224 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGW-GVAVLVGVPSKDAVFM  267 (341)
Q Consensus       224 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~  267 (341)
                      -+++|+.++..|-.                         .....++..+.+.+ |+++.++...+...++
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P  158 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP  158 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence            24799999977631                         12334555665544 8999988665544444

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=96.13  E-value=0.033  Score=53.71  Aligned_cols=78  Identities=27%  Similarity=0.364  Sum_probs=55.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHHcCCceecCCCCCChh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDRP  214 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~---------------------~~~~~~~~~g~~~vv~~~~~~~~  214 (341)
                      .+.+|+|+|+|+.|+.++..++..|+ .|+..+..+                     ...+.++++|++..++..-..+ 
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~-  217 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRD-  217 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCc-
Confidence            67899999999999999999999999 787777653                     2456778899876655432110 


Q ss_pred             HHHHHHHHhcCCccEEEeccCChH
Q 019414          215 IQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       215 ~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +  .+.... .++|.||.++|...
T Consensus       218 ~--~~~~~~-~~~D~vilAtGa~~  238 (467)
T TIGR01318       218 I--SLDDLL-EDYDAVFLGVGTYR  238 (467)
T ss_pred             c--CHHHHH-hcCCEEEEEeCCCC
Confidence            1  111111 26999999999743

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.032  Score=50.25  Aligned_cols=79  Identities=24%  Similarity=0.355  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC--cee---cCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV--TDF---VNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~--~~v---v~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +|.++||+|+ |++|.++++.+...|+ +|+.+++++++.+. .++++.  ...   .|..+.+ .+.+.+.+...  ++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~   85 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence            4678999987 9999999999999999 88888888887654 344542  111   3443322 12222332222  37


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|++.|.
T Consensus        86 id~vI~nAG~   95 (296)
T PRK05872         86 IDVVVANAGI   95 (296)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.10  E-value=0.059  Score=45.67  Aligned_cols=35  Identities=34%  Similarity=0.358  Sum_probs=31.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      .+.+|+|+|.|++|..+++.+...|..++..++.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            35779999999999999999999999899999876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK14967 putative methyltransferase; Provisional

Probab=96.10  E-value=0.082  Score=45.50  Aligned_cols=98  Identities=23%  Similarity=0.170  Sum_probs=63.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcC
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ....++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++    .+....+..  .+  +.+.   ..++
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~  100 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFR  100 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCC
Confidence            334678899999999986 8888888875 55599999999988776554    343221111  11  2221   1234


Q ss_pred             CccEEEeccCC---------------------------hHHHHHHHHHhcCCCcEEEEE
Q 019414          226 GVDRSVECTGN---------------------------IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       226 ~~d~vld~~g~---------------------------~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      .||+|+-..+.                           ...++++.+.|+++ |+++++
T Consensus       101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~  158 (223)
T PRK14967        101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV  158 (223)
T ss_pred             CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence            79999853210                           11345677889997 988865

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.09  E-value=0.068  Score=47.73  Aligned_cols=101  Identities=25%  Similarity=0.353  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      ..++|.++|=+|+|+ |.+++. |..+|+.+|++++.++-..+.+++    .+.+..+ ....    -........+.||
T Consensus       159 ~~~~g~~vlDvGcGS-GILaIA-a~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~-~~~~----~~~~~~~~~~~~D  231 (300)
T COG2264         159 LLKKGKTVLDVGCGS-GILAIA-AAKLGAKKVVGVDIDPQAVEAARENARLNGVELLV-QAKG----FLLLEVPENGPFD  231 (300)
T ss_pred             hhcCCCEEEEecCCh-hHHHHH-HHHcCCceEEEecCCHHHHHHHHHHHHHcCCchhh-hccc----ccchhhcccCccc
Confidence            356899999888753 544443 345688799999999877666554    3333200 1110    0011112224799


Q ss_pred             EEEecc-CC--hHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          229 RSVECT-GN--IDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       229 ~vld~~-g~--~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +|+-.+ ..  ....++....++|+ |++++.|...
T Consensus       232 vIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~  266 (300)
T COG2264         232 VIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE  266 (300)
T ss_pred             EEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence            998432 11  13567888899997 9999999654

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.07  E-value=0.078  Score=42.87  Aligned_cols=90  Identities=30%  Similarity=0.346  Sum_probs=58.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .-.|.+++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|....  .      ..+.+     ...|++|-+
T Consensus        20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--~------~~~a~-----~~adi~vta   85 (162)
T PF00670_consen   20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--T------LEEAL-----RDADIFVTA   85 (162)
T ss_dssp             --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------HHHHT-----TT-SEEEE-
T ss_pred             eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--C------HHHHH-----hhCCEEEEC
Confidence            4478899999999999999999999999 99999999877665555555321  0      22222     247999999


Q ss_pred             cCChHH-HHHHHHHhcCCCcEEEEEc
Q 019414          234 TGNIDN-MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       234 ~g~~~~-~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|.... -.+.++.++++ ..+...|
T Consensus        86 TG~~~vi~~e~~~~mkdg-ail~n~G  110 (162)
T PF00670_consen   86 TGNKDVITGEHFRQMKDG-AILANAG  110 (162)
T ss_dssp             SSSSSSB-HHHHHHS-TT-EEEEESS
T ss_pred             CCCccccCHHHHHHhcCC-eEEeccC
Confidence            998654 35778888885 5555555

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.044  Score=47.21  Aligned_cols=78  Identities=22%  Similarity=0.299  Sum_probs=48.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHH---HcCCcee-cCCCCCChhHHHHHHHHhc--CCcc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAK---KFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-~~~---~~g~~~v-v~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      +.++||+|+ |.+|..+++.+...|+ +|+.++++.++.. .++   ..+...+ .|..+.+ ++.+.+.+...  +++|
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQ-AARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHH-HHHHHHHHHHHHhCCcC
Confidence            678999987 9999999998888899 7899988776532 222   2233221 2222211 12222222222  3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        85 ~vi~~ag~   92 (239)
T PRK12828         85 ALVNIAGA   92 (239)
T ss_pred             EEEECCcc
Confidence            99998763

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.043  Score=48.36  Aligned_cols=78  Identities=19%  Similarity=0.278  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-ee--cCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~v--v~~~~~~~~~~~~i~~~~~--~  225 (341)
                      ++.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    .+.. .+  .|..+.+ .+.+.+.+...  +
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 8999999998888999 88888888876554322    2322 11  3443322 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        87 ~id~vi~~Ag   96 (263)
T PRK07814         87 RLDIVVNNVG   96 (263)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.04  E-value=0.044  Score=48.24  Aligned_cols=78  Identities=24%  Similarity=0.305  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      ++.+++|+|+ |++|.+.++.+...|+ +|+.+++++++.+.+++. +...   ..|..+.+ ...+.+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLD-DHKEAVARCVAAFGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence            4678999987 9999999988888999 888888888776665543 3211   12333221 12233333222  3689


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      +++++.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999876

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.11  Score=45.05  Aligned_cols=100  Identities=19%  Similarity=0.228  Sum_probs=57.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |.+|...+..+...|+ .|+.+.++.+ +.+.    ++..+...   ..|..+.+ .+.+.+.+...  +
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   83 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEE-SVAALMDTAREEFG   83 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhCC
Confidence            568999987 9999999998888898 7877777543 2222    22233321   23443322 12222222222  3


Q ss_pred             CccEEEeccCCh-------------------HHHHHHHHHhcCCCcEEEEEcc
Q 019414          226 GVDRSVECTGNI-------------------DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       226 ~~d~vld~~g~~-------------------~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ++|+++.+.|..                   ..++.+.+.+... ++++.++.
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence            689998877532                   1233444444555 78887764

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.98  E-value=0.061  Score=48.16  Aligned_cols=42  Identities=24%  Similarity=0.254  Sum_probs=37.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  197 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~  197 (341)
                      .+.+++|+|+|++|.+++..+...|+++|+.+.++.+|.+.+
T Consensus       126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l  167 (284)
T PRK12549        126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL  167 (284)
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            457899999999999999999999998999999998886654

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.98  E-value=0.062  Score=47.72  Aligned_cols=69  Identities=23%  Similarity=0.137  Sum_probs=49.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      ....+.+++|+|+|+.+.+++.-++..|+.+|+.+.|+.+|.+.+. .++..           +...+   ....+|+|+
T Consensus       118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence            3445668999999999999999899999988999999988866543 34321           11011   112589999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      +|+.
T Consensus       184 NaTp  187 (272)
T PRK12550        184 NVTP  187 (272)
T ss_pred             ECCc
Confidence            9975

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.98  E-value=0.056  Score=49.32  Aligned_cols=79  Identities=20%  Similarity=0.220  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-----cC-Cc---eecCCCCCChhHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FG-VT---DFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-----~g-~~---~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      .|.+++|+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+     .+ ..   ..+|..+...+..+.+.+..++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            4789999997 9999998887777899 78888899888654322     11 11   1234443212244455554444


Q ss_pred             -CccEEEeccC
Q 019414          226 -GVDRSVECTG  235 (341)
Q Consensus       226 -~~d~vld~~g  235 (341)
                       .+|+++++.|
T Consensus       131 ~didilVnnAG  141 (320)
T PLN02780        131 LDVGVLINNVG  141 (320)
T ss_pred             CCccEEEEecC
Confidence             5779998876

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.97  E-value=0.016  Score=51.98  Aligned_cols=97  Identities=24%  Similarity=0.309  Sum_probs=57.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce-ecCCCCCChhHHHHHHHHhcCCcc
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      ..+|++||=+|+|. |.+++..+ .+|+++|++++.++...+.+++    .|... +......+         ...++||
T Consensus       159 ~~~g~~vLDvG~GS-GILaiaA~-klGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~---------~~~~~~d  227 (295)
T PF06325_consen  159 VKPGKRVLDVGCGS-GILAIAAA-KLGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED---------LVEGKFD  227 (295)
T ss_dssp             SSTTSEEEEES-TT-SHHHHHHH-HTTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC---------TCCS-EE
T ss_pred             ccCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc---------cccccCC
Confidence            57889999888642 33333333 3599899999999987666554    33322 21111111         1124799


Q ss_pred             EEEeccCChH---HHHHHHHHhcCCCcEEEEEccCCC
Q 019414          229 RSVECTGNID---NMISAFECVHDGWGVAVLVGVPSK  262 (341)
Q Consensus       229 ~vld~~g~~~---~~~~~~~~l~~~~g~~v~~g~~~~  262 (341)
                      +|+--.-...   ......+.++++ |.+++.|....
T Consensus       228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~~  263 (295)
T PF06325_consen  228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILEE  263 (295)
T ss_dssp             EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEGG
T ss_pred             EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccHH
Confidence            9985543322   344566778897 99999987543

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK04457 spermidine synthase; Provisional

Probab=95.95  E-value=0.1  Score=46.11  Aligned_cols=97  Identities=19%  Similarity=0.164  Sum_probs=65.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CC----ceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV----TDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~----~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      .++.+||++|+|+ |..+..+++.....++++++.+++-.+.+++. +.    +.+ .....|  ..+.+.. ..+.+|+
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv-~v~~~D--a~~~l~~-~~~~yD~  139 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERF-EVIEAD--GAEYIAV-HRHSTDV  139 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCce-EEEECC--HHHHHHh-CCCCCCE
Confidence            3457899999875 77888888877555999999999999998874 32    111 111122  3333433 2347999


Q ss_pred             EE-eccCC---------hHHHHHHHHHhcCCCcEEEEE
Q 019414          230 SV-ECTGN---------IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       230 vl-d~~g~---------~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      |+ |....         .+.++.+.+.|+|+ |+++..
T Consensus       140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin  176 (262)
T PRK04457        140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN  176 (262)
T ss_pred             EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence            86 54321         36788999999998 998874

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.051  Score=48.31  Aligned_cols=78  Identities=24%  Similarity=0.374  Sum_probs=51.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce----ecCCCCCChhHHHHHHHHhc--CCccE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD----FVNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~----vv~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.....    ..|..+.+ .+.+.+.+...  +++|+
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCCE
Confidence            567999987 9999999998888898 8999999888876655532221    22333322 12222332222  36899


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      ++++.|.
T Consensus        82 vv~~ag~   88 (277)
T PRK06180         82 LVNNAGY   88 (277)
T ss_pred             EEECCCc
Confidence            9999875

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.048  Score=47.68  Aligned_cols=79  Identities=27%  Similarity=0.330  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce----ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD----FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~----vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      ++.++||+|+ |++|...++.+...|+ +|+.+.++++..+...+.....    ..|..+.+ .+.+.+.+...  +++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQ-SVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence            4678999987 9999999888888999 8888888877655555443211    23333221 12222222211  3689


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.059  Score=47.38  Aligned_cols=81  Identities=25%  Similarity=0.342  Sum_probs=51.8

Q ss_pred             CCCCCEEEEECC-C-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-----cCCcee----cCCCCCChhHHHHHHHH
Q 019414          154 PERGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF----VNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       154 ~~~g~~vlI~G~-g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-----~g~~~v----v~~~~~~~~~~~~i~~~  222 (341)
                      +.++.++||+|+ | ++|.+.++.+...|+ +|+.+++++++.+...+     ++...+    .|..+.+ .+.+.+.+.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~   91 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA-QVDALIDAA   91 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH-HHHHHHHHH
Confidence            345788999986 6 799999999999999 78888888776544322     343222    2443322 122222222


Q ss_pred             h--cCCccEEEeccCC
Q 019414          223 T--NGGVDRSVECTGN  236 (341)
Q Consensus       223 ~--~~~~d~vld~~g~  236 (341)
                      .  .+++|++|++.|.
T Consensus        92 ~~~~g~id~li~~ag~  107 (262)
T PRK07831         92 VERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            1  1479999999874

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.93  E-value=0.058  Score=47.50  Aligned_cols=78  Identities=22%  Similarity=0.310  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc---eecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT---DFVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~---~vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      ++.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++..   ...|..+.+ .+.+.+.+...  +++|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYA-DNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHH-HHHHHHHHHHHhcCCCC
Confidence            4678999987 9999999998888999 88888888877665543 3321   122333221 12223333222  3699


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      +++++.|
T Consensus        83 ~li~~ag   89 (263)
T PRK06200         83 CFVGNAG   89 (263)
T ss_pred             EEEECCC
Confidence            9999887

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.92  E-value=0.09  Score=43.09  Aligned_cols=97  Identities=20%  Similarity=0.190  Sum_probs=61.9

Q ss_pred             hhccccchhhhhhhhhhcCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh
Q 019414          135 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  213 (341)
Q Consensus       135 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~  213 (341)
                      ...|+...++...+.+...--.|.+++|+|+|. +|..++..++..|+ +|+.+.++.+.                    
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~--------------------   80 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN--------------------   80 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh--------------------
Confidence            334444444443333333335789999999986 59989999999999 77777665211                    


Q ss_pred             hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          214 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       214 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                       ..+.+.     .+|+||-+++.+..+..-  .+.++ -.++.++...
T Consensus        81 -l~~~l~-----~aDiVIsat~~~~ii~~~--~~~~~-~viIDla~pr  119 (168)
T cd01080          81 -LKEHTK-----QADIVIVAVGKPGLVKGD--MVKPG-AVVIDVGINR  119 (168)
T ss_pred             -HHHHHh-----hCCEEEEcCCCCceecHH--HccCC-eEEEEccCCC
Confidence             222222     389999999886644432  46665 6777777543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.91  E-value=0.065  Score=46.60  Aligned_cols=78  Identities=21%  Similarity=0.374  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      ++.++||+|+ |++|+..++.+...|+ +|+.+++++++.+.+    +..+...   .+|..+.+ .+.+.+.....  +
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEE-DVEATFAQIAEDFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999999988998 788888887665433    2334321   23332221 13232333222  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|.+|++.|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.91  E-value=0.019  Score=43.01  Aligned_cols=91  Identities=20%  Similarity=0.184  Sum_probs=58.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|||+|+|.+|..-++.+...|+ +|++++...   +.+++ ... .   ....  +.    + .-.++++|+-+.+
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~~-~i~-~---~~~~--~~----~-~l~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSEG-LIQ-L---IRRE--FE----E-DLDGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHHT-SCE-E---EESS---G----G-GCTTESEEEE-SS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhhh-HHH-H---Hhhh--HH----H-HHhhheEEEecCC
Confidence            46789999999999999999999998 888887665   22221 111 1   1111  21    0 0136999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKD  263 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~  263 (341)
                      .++.-++..+..+.. +..+...+....
T Consensus        70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~   96 (103)
T PF13241_consen   70 DPELNEAIYADARAR-GILVNVVDDPEL   96 (103)
T ss_dssp             -HHHHHHHHHHHHHT-TSEEEETT-CCC
T ss_pred             CHHHHHHHHHHHhhC-CEEEEECCCcCC
Confidence            877667777777766 888888765443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.90  E-value=0.066  Score=43.92  Aligned_cols=93  Identities=16%  Similarity=0.309  Sum_probs=60.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--ceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|+ |-+|...++-|+.+|. .|+++.++++|....+..-+  ..+++..+    +.+.   +  .++|+||++.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~----~a~~---l--~g~DaVIsA~~   71 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS----LASD---L--AGHDAVISAFG   71 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh----hHhh---h--cCCceEEEecc
Confidence            4788987 9999999999999999 99999999998755422211  01222221    1111   1  37999999987


Q ss_pred             Ch---------HHHHHHHHHhcC-CCcEEEEEccCC
Q 019414          236 NI---------DNMISAFECVHD-GWGVAVLVGVPS  261 (341)
Q Consensus       236 ~~---------~~~~~~~~~l~~-~~g~~v~~g~~~  261 (341)
                      ..         ...+.++..++. +-.++..+|...
T Consensus        72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence            53         123445666654 224777777543

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.067  Score=47.38  Aligned_cols=78  Identities=24%  Similarity=0.340  Sum_probs=51.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC-Cce-ecCCCCCChhHHHHHHHHhc--CCccEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDRS  230 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g-~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~v  230 (341)
                      +.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++ +.. ..|..+.+ .+.+.+.....  +++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            568999987 9999999988888899 788888888776543 3444 222 23444332 13222332222  379999


Q ss_pred             EeccCC
Q 019414          231 VECTGN  236 (341)
Q Consensus       231 ld~~g~  236 (341)
                      +++.|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            998873

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.87  E-value=0.079  Score=48.03  Aligned_cols=91  Identities=26%  Similarity=0.421  Sum_probs=61.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      .+|.|+|.|.+|.+.+..++..|. ..|++.++++++.+.+++.|....+.   .+  ..+.+     ...|+||.|+..
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~--~~~~~-----~~aDvViiavp~   76 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TS--AAEAV-----KGADLVILCVPV   76 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CC--HHHHh-----cCCCEEEECCCH
Confidence            579999999999999998888884 38999999999988888887532111   11  21111     258999999865


Q ss_pred             hHH---HHHHHHHhcCCCcEEEEEcc
Q 019414          237 IDN---MISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       237 ~~~---~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ...   ++.....++++ ..++.++.
T Consensus        77 ~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         77 GASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            322   33333455665 66666654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.86  E-value=0.027  Score=50.07  Aligned_cols=44  Identities=36%  Similarity=0.449  Sum_probs=39.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  199 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~  199 (341)
                      +|.+++|+|+|+.+.+++.-++..|+.+++++.|+.+|.+.+.+
T Consensus       125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            57999999999999999999999998899999999988666544

>PRK09291 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.059  Score=47.13  Aligned_cols=73  Identities=14%  Similarity=0.138  Sum_probs=48.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce---ecCCCCCChhHHHHHHHHhcCCcc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      +.++||+|+ |++|...++.+...|+ +|+++.+++++.+.+++    .+...   ..|..+.     +.+.+...+++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-----IDRAQAAEWDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-----HHHHHHhcCCCC
Confidence            357999987 9999999999999998 88888887766544432    33221   1233332     223333334799


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus        76 ~vi~~ag   82 (257)
T PRK09291         76 VLLNNAG   82 (257)
T ss_pred             EEEECCC
Confidence            9999877

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=95.82  E-value=0.078  Score=42.58  Aligned_cols=74  Identities=23%  Similarity=0.321  Sum_probs=49.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      ..+.+++|+|+|.+|...++.+...|...|++++++.++.+. +++++... .....+    ..+.     -+++|+|+.
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD----LEEL-----LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc----hhhc-----cccCCEEEe
Confidence            456789999999999999988888864489999888877654 45555421 011111    1111     136899999


Q ss_pred             ccCCh
Q 019414          233 CTGNI  237 (341)
Q Consensus       233 ~~g~~  237 (341)
                      |++..
T Consensus        88 ~~~~~   92 (155)
T cd01065          88 TTPVG   92 (155)
T ss_pred             CcCCC
Confidence            98763

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12829 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.059  Score=47.31  Aligned_cols=80  Identities=25%  Similarity=0.283  Sum_probs=51.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc--e--ecCCCCCChhHHHHHHHHh--cCC
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT--D--FVNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~--~--vv~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      -++.++||+|+ |.+|..+++.+...|+ .|+.+.++.+..+.+.+ ..-.  .  ..|..+.+ .+.+.+.+..  -++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPA-QVERVFDTAVERFGG   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH-HHHHHHHHHHHHhCC
Confidence            46789999987 9999999999988999 78999888776655433 2211  1  23333322 1222222211  137


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+||++.|.
T Consensus        87 ~d~vi~~ag~   96 (264)
T PRK12829         87 LDVLVNNAGI   96 (264)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.80  E-value=0.048  Score=54.71  Aligned_cols=76  Identities=28%  Similarity=0.336  Sum_probs=55.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHHcCCceecCCCCC-Ch
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-DR  213 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~---------------------~~~~~~~~g~~~vv~~~~~-~~  213 (341)
                      .+.+|+|+|+|+.|+.++..++..|+ .|+..++.+.                     ..+.++++|++..++..-. +.
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 7888876652                     4567788898766654321 11


Q ss_pred             hHHHHHHHHhcCCccEEEeccCCh
Q 019414          214 PIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       214 ~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      .+.    ++. .++|.||.++|..
T Consensus       388 ~~~----~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TFS----DLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CHH----HHH-hcCCEEEEeCCCC
Confidence            122    121 3699999999863

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.78  E-value=0.037  Score=49.49  Aligned_cols=75  Identities=13%  Similarity=0.058  Sum_probs=50.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      ++.+++|+|+|+.+.+++.-+..+|+++|+.+.|+.+|.+.+ ++++... +.....    . +.+.... ..+|+||+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~-~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----D-SGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----h-hhhhhcc-cCCCEEEEC
Confidence            577899999999999999999999998999999998876654 4443211 110100    0 1111111 358999999


Q ss_pred             cCC
Q 019414          234 TGN  236 (341)
Q Consensus       234 ~g~  236 (341)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            865

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.77  E-value=0.046  Score=46.14  Aligned_cols=98  Identities=15%  Similarity=0.247  Sum_probs=61.3

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHH-hc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEM-TN  224 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~-~~  224 (341)
                      ......++.+||-+|+|. |..+..+|+. |. .|++++.+++..+.+++.    +...+ .....+  +    .+. .+
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d--~----~~~~~~   93 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD--L----NNLTFD   93 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC--h----hhCCcC
Confidence            334455678999998865 6677777775 77 999999999877766542    22211 111111  1    111 12


Q ss_pred             CCccEEEeccC----C----hHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRSVECTG----N----IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~vld~~g----~----~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.||+|+....    .    ...+..+.+.|+|+ |.++.+.
T Consensus        94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~  134 (197)
T PRK11207         94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA  134 (197)
T ss_pred             CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence            36999986432    1    24577888899998 9865544

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.76  E-value=0.058  Score=48.16  Aligned_cols=96  Identities=19%  Similarity=0.182  Sum_probs=58.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      ..+.+++|+|+|++|.+++..+...|+.+|+++.++.++.+.+. +++....+.. +.+  ..+.     -..+|+|++|
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~~~~-----~~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--LQEE-----LADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--chhc-----cccCCEEEEC
Confidence            35678999999999999999999999669999999988866543 3432110111 000  1110     1358999999


Q ss_pred             cCChHH-----HHHHHHHhcCCCcEEEEEcc
Q 019414          234 TGNIDN-----MISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       234 ~g~~~~-----~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ++....     .......+.+. ..++.+-.
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~DivY  222 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMIY  222 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence            864211     01123455554 56655543

>PRK01581 speE spermidine synthase; Validated

Probab=95.75  E-value=0.16  Score=46.70  Aligned_cols=98  Identities=16%  Similarity=0.152  Sum_probs=63.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC-C----------ceecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-V----------TDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g-~----------~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ...+|||+|+| .|.++..+++..+..+|++++.+++-.+.++++. .          .++ ...-.|  ..+.+.. ..
T Consensus       150 ~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi~D--a~~fL~~-~~  224 (374)
T PRK01581        150 DPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHVCD--AKEFLSS-PS  224 (374)
T ss_pred             CCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEECc--HHHHHHh-cC
Confidence            34689999975 4667777777766679999999999999998631 0          111 000011  3333333 34


Q ss_pred             CCccEEE-eccCC----------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          225 GGVDRSV-ECTGN----------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       225 ~~~d~vl-d~~g~----------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +.||+|| |....          .+.++.+.+.|+|+ |.++....
T Consensus       225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~  269 (374)
T PRK01581        225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN  269 (374)
T ss_pred             CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            4799987 53211          23577889999998 99877643

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.73  E-value=0.054  Score=47.11  Aligned_cols=79  Identities=23%  Similarity=0.291  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC--Cc---eecCCCCCChhHHHHHHHHh--cCC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG--VT---DFVNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g--~~---~vv~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+ ..+.  ..   ...|..+.+ .+...+.+..  .++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEA-DVEAAVAAALERFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence            3568999987 9999999888888899 799999988775543 2222  11   122333222 1222222221  136


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK05867 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.071  Score=46.63  Aligned_cols=79  Identities=23%  Similarity=0.320  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+.++.++.+.+.    +.+...   ..|..+.+ .+.+.+.+...  +
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ-QVTSMLDQVTAELG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            3678999987 9999999999888999 8888888877655432    223221   23433322 12222222221  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998763

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.71  E-value=0.11  Score=43.85  Aligned_cols=81  Identities=30%  Similarity=0.322  Sum_probs=55.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .|.+++|+|.|.+|..+++.+...|+ +|++++++.++.+.+.+ +++. .++..+    +       .....|+++-|.
T Consensus        27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~----l-------~~~~~Dv~vp~A   93 (200)
T cd01075          27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE----I-------YSVDADVFAPCA   93 (200)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh----h-------ccccCCEEEecc
Confidence            56789999999999999999999999 88899998887766544 4653 222211    1       112588888665


Q ss_pred             CChHHHHHHHHHhcC
Q 019414          235 GNIDNMISAFECVHD  249 (341)
Q Consensus       235 g~~~~~~~~~~~l~~  249 (341)
                      .....-...++.++.
T Consensus        94 ~~~~I~~~~~~~l~~  108 (200)
T cd01075          94 LGGVINDDTIPQLKA  108 (200)
T ss_pred             cccccCHHHHHHcCC
Confidence            443333444455543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.67  E-value=0.11  Score=45.09  Aligned_cols=105  Identities=15%  Similarity=0.185  Sum_probs=66.9

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh-
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-  223 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~-  223 (341)
                      ...+..+..+||=+|+| .|..++.+++..+ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+.++. 
T Consensus        62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~  138 (234)
T PLN02781         62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN  138 (234)
T ss_pred             HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence            34566677889988864 3666667777653 4499999999988777654    4543222222222  444444332 


Q ss_pred             ---cCCccEEE-ecc--CChHHHHHHHHHhcCCCcEEEEEc
Q 019414          224 ---NGGVDRSV-ECT--GNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 ---~~~~d~vl-d~~--g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                         .+.||.|| |+-  .....++.++++++++ |.++.-+
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn  178 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN  178 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence               23799997 432  2245688899999997 8877644

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.097  Score=46.05  Aligned_cols=79  Identities=24%  Similarity=0.395  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c--CCc-ee--cCCCCCChhHHHHHHHHh-cCCc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DF--VNTSEHDRPIQEVIAEMT-NGGV  227 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~--g~~-~v--v~~~~~~~~~~~~i~~~~-~~~~  227 (341)
                      ++.++||+|+ |++|...+..+...|+ .|+++++++++.+.+.+ +  +.. ..  .|..+.+ .+.+...... .+++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~i   81 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEA-GREAVLARAREMGGI   81 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHhcCCC
Confidence            3568999986 9999999988888899 88999888877655432 2  211 11  2333221 1221111111 2478


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |.++++.|.
T Consensus        82 d~lv~~ag~   90 (263)
T PRK09072         82 NVLINNAGV   90 (263)
T ss_pred             CEEEECCCC
Confidence            999998774

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.65  E-value=0.096  Score=47.09  Aligned_cols=78  Identities=26%  Similarity=0.420  Sum_probs=50.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce-e--cCCCCCChhHHHHHHHHh--cCC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-v--v~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+    .+... .  .|..+.+ .+.+.+....  -++
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~~g~  117 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLD-AVDALVADVEKRIGG  117 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcCC
Confidence            468999987 9999999998888898 89999898877554322    23321 1  2333221 1222222221  137


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus       118 id~li~~AG~  127 (293)
T PRK05866        118 VDILINNAGR  127 (293)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.11  Score=45.01  Aligned_cols=80  Identities=28%  Similarity=0.375  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCC-c---eecCCCCCC----hhHHHHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV-T---DFVNTSEHD----RPIQEVIAEM  222 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~-~---~vv~~~~~~----~~~~~~i~~~  222 (341)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+. .   ..+|..+.+    ..+.+.+.+.
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            3568999987 9999999988888899 8999989887655432    2221 1   112332211    1133344444


Q ss_pred             hcCCccEEEeccCC
Q 019414          223 TNGGVDRSVECTGN  236 (341)
Q Consensus       223 ~~~~~d~vld~~g~  236 (341)
                      ..+.+|++|++.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            43478999998873

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.09  Score=45.74  Aligned_cols=79  Identities=25%  Similarity=0.303  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H---cCCc---eecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVT---DFVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~~---~vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +   .+..   ...|..+.+ .+.+.+.....  +
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPD-SAKAMADATVSAFG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence            3568999987 9999999988888898 8888988876543332 2   2221   123333322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>PLN02476 O-methyltransferase

Probab=95.63  E-value=0.095  Score=46.52  Aligned_cols=105  Identities=20%  Similarity=0.209  Sum_probs=67.4

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHh-
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT-  223 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~-  223 (341)
                      ...+..+..+||=+|++ +|..++.+|+.++ -.+|++++.+++..+.++    +.|...-+.....+  ..+.+.++. 
T Consensus       112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~  188 (278)
T PLN02476        112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ  188 (278)
T ss_pred             HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence            34566677899999863 3666667777663 237999999999877765    45654322222222  444443331 


Q ss_pred             ---cCCccEEE-eccC--ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          224 ---NGGVDRSV-ECTG--NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 ---~~~~d~vl-d~~g--~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                         .+.||.|| |+--  ..+.++.++++++++ |.++.=+
T Consensus       189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN  228 (278)
T PLN02476        189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN  228 (278)
T ss_pred             cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence               24799997 4431  235688899999997 8877654

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.082  Score=46.30  Aligned_cols=79  Identities=20%  Similarity=0.217  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      ++.++||+|+ |++|...++.+...|+ +|+.+.+++++.+..++   .+...   ..|..+.+ .+...+.+...  ++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDA-QCRDAVEQTVAKFGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcCC
Confidence            3568999987 9999999888888899 77778787776544433   33321   23333321 12222322222  37


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999873

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.59  E-value=0.13  Score=43.14  Aligned_cols=76  Identities=29%  Similarity=0.288  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCce-ecCCCCCChhHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-FVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~~-vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      ++.+++|+|+ |.+|.+++..+...|. +|+.+.++.++.+.+.+ +    +... .++..+    .. .+.+.. .+.|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~-~~~~~~-~~~d   99 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD----DA-ARAAAI-KGAD   99 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC----HH-HHHHHH-hcCC
Confidence            5678999986 9999998888888887 88888888877654432 3    2221 112221    11 111211 2589


Q ss_pred             EEEeccCChH
Q 019414          229 RSVECTGNID  238 (341)
Q Consensus       229 ~vld~~g~~~  238 (341)
                      +||.+.+.+.
T Consensus       100 iVi~at~~g~  109 (194)
T cd01078         100 VVFAAGAAGV  109 (194)
T ss_pred             EEEECCCCCc
Confidence            9999876644

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.58  E-value=0.18  Score=43.46  Aligned_cols=91  Identities=21%  Similarity=0.204  Sum_probs=58.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEEcCC----hhh--------HHHHHHcCCceecCCCCCChhHHHHHH
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS----SKR--------FEEAKKFGVTDFVNTSEHDRPIQEVIA  220 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~--~vv~v~~~----~~~--------~~~~~~~g~~~vv~~~~~~~~~~~~i~  220 (341)
                      -.+.+++|+|+|+.|.+.+..+...|.+  +++.++++    .++        .+++++++... .+   .+  +.+.++
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~--l~~~l~   96 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GT--LKEALK   96 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CC--HHHHHh
Confidence            3567999999999999999888888997  89999988    343        33445443211 10   11  333332


Q ss_pred             HHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          221 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       221 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                           ++|++|++++..-.-+..++.+.+. ..+..+
T Consensus        97 -----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~l  127 (226)
T cd05311          97 -----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFAL  127 (226)
T ss_pred             -----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEe
Confidence                 3899999986322223555666665 555444

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.58  E-value=0.096  Score=45.83  Aligned_cols=78  Identities=22%  Similarity=0.271  Sum_probs=47.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      +.+++|+|+ |++|.+.++.+...|+ +|+.+.+ +++..+.+++.+... ..|..+.+ ...+.+.+...  +++|++|
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNRD-QVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            578999987 9999999988888899 6666544 444444454444322 23443322 12233333222  3699999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      ++.|.
T Consensus        85 ~~ag~   89 (255)
T PRK06463         85 NNAGI   89 (255)
T ss_pred             ECCCc
Confidence            98864

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.58  E-value=0.089  Score=49.34  Aligned_cols=91  Identities=26%  Similarity=0.367  Sum_probs=55.4

Q ss_pred             EEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH--cCC--c-eecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          160 VAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK--FGV--T-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~--~g~--~-~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      |+|+|+|.+|..+++.+...+- .+|++++++.++.+.+.+  .+.  . ..+|..+.     +.+.++.. +.|+|++|
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~l~~~~~-~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP-----ESLAELLR-GCDVVINC   74 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH-----HHHHHHHT-TSSEEEE-
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH-----HHHHHHHh-cCCEEEEC
Confidence            6889999999999999887764 389999999999776543  222  1 23344332     22444433 36999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEE
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      +|.......+-.|+..+ -.++..
T Consensus        75 ~gp~~~~~v~~~~i~~g-~~yvD~   97 (386)
T PF03435_consen   75 AGPFFGEPVARACIEAG-VHYVDT   97 (386)
T ss_dssp             SSGGGHHHHHHHHHHHT--EEEES
T ss_pred             CccchhHHHHHHHHHhC-CCeecc
Confidence            98754444555555554 566663

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.58  E-value=0.32  Score=39.60  Aligned_cols=88  Identities=20%  Similarity=0.284  Sum_probs=58.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|.++|.|.+|...+.-+...|+ .|.+.+++.++.+.+.+.|+... +.      ..+.+.+     .|+||-|+.+.+
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~s------~~e~~~~-----~dvvi~~v~~~~   69 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-DS------PAEAAEQ-----ADVVILCVPDDD   69 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-SS------HHHHHHH-----BSEEEE-SSSHH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-hh------hhhHhhc-----ccceEeecccch
Confidence            68899999999999999888999 89999999999998888875432 11      3333322     588888887755


Q ss_pred             HHHHHHH------HhcCCCcEEEEEccC
Q 019414          239 NMISAFE------CVHDGWGVAVLVGVP  260 (341)
Q Consensus       239 ~~~~~~~------~l~~~~g~~v~~g~~  260 (341)
                      ..+..+.      .+.++ ..++.++..
T Consensus        70 ~v~~v~~~~~i~~~l~~g-~iiid~sT~   96 (163)
T PF03446_consen   70 AVEAVLFGENILAGLRPG-KIIIDMSTI   96 (163)
T ss_dssp             HHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred             hhhhhhhhhHHhhccccc-eEEEecCCc
Confidence            5555443      34454 566666543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08339 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.11  Score=45.95  Aligned_cols=79  Identities=19%  Similarity=0.286  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCc---eecCCCCCChhHHHHHHHHh-cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT---DFVNTSEHDRPIQEVIAEMT-NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~---~vv~~~~~~~~~~~~i~~~~-~~  225 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ +    +..   ...|..+.+ ...+.+.+.. .+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~g   84 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE-DLERTVKELKNIG   84 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHHHHhhC
Confidence            3678999987 8999999999999999 88888888777554332 2    322   123433322 1222222221 14


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        85 ~iD~lv~nag~   95 (263)
T PRK08339         85 EPDIFFFSTGG   95 (263)
T ss_pred             CCcEEEECCCC
Confidence            79999998874

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.11  Score=44.50  Aligned_cols=74  Identities=23%  Similarity=0.290  Sum_probs=48.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +++|+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++... ..|..+.+ .+.+.+.+. .+.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~-~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDPA-SLEEARGLF-PHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCHH-HHHHHHHHH-hhcCcEEEECCC
Confidence            4889987 9999999998888898 888888888776544 4444432 23443322 133223222 236899998764

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.57  E-value=0.1  Score=48.85  Aligned_cols=95  Identities=24%  Similarity=0.271  Sum_probs=63.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .+.++||+|+|-+|..++..+...|...|+.+-|+.+|.. +++++|+.. +..++    ..+.+     ..+|+||-++
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l~e----l~~~l-----~~~DvVissT  246 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VALEE----LLEAL-----AEADVVISST  246 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecHHH----HHHhh-----hhCCEEEEec
Confidence            6788999999999999999999999889999989888854 678898542 22221    22222     1489999998


Q ss_pred             CChHH---HHHHHHHhcCCCc-EEEEEccC
Q 019414          235 GNIDN---MISAFECVHDGWG-VAVLVGVP  260 (341)
Q Consensus       235 g~~~~---~~~~~~~l~~~~g-~~v~~g~~  260 (341)
                      +++..   -......+..... .+++++.+
T Consensus       247 sa~~~ii~~~~ve~a~~~r~~~livDiavP  276 (414)
T COG0373         247 SAPHPIITREMVERALKIRKRLLIVDIAVP  276 (414)
T ss_pred             CCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence            87542   2233334443212 35566544

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.56  E-value=0.31  Score=43.12  Aligned_cols=104  Identities=16%  Similarity=0.198  Sum_probs=59.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------h----HHHHHHcCCce-ecCCCCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-------------------R----FEEAKKFGVTD-FVNTSEH  211 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-------------------~----~~~~~~~g~~~-vv~~~~~  211 (341)
                      .+.+|+|+|.|++|..++..+-..|..+++.++.+.-                   |    .+.++++.... +....+.
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            4578999999999999999999999888888886521                   1    11222333321 1111110


Q ss_pred             ChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          212 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       212 ~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      -  -.+.+.++....+|+||||..+...-..+.+.+...+-.++..+...
T Consensus       109 i--~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag  156 (268)
T PRK15116        109 I--TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG  156 (268)
T ss_pred             c--ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence            0  01123333334699999999875443334444443324455555443

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.52  E-value=0.14  Score=45.66  Aligned_cols=95  Identities=21%  Similarity=0.262  Sum_probs=64.7

Q ss_pred             hccccchhhhhhhhhhcCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh
Q 019414          136 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  213 (341)
Q Consensus       136 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G~g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~  213 (341)
                      .+||+....+.. ++..++ -.|.+++|+|.| .+|.-+++++...|+ .|+.+.+...                   + 
T Consensus       137 ~~PcTp~ai~~l-l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~-------------------~-  194 (286)
T PRK14175        137 FVPCTPLGIMEI-LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK-------------------D-  194 (286)
T ss_pred             CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch-------------------h-
Confidence            355554433333 344443 478999999985 499999999999999 7877754321                   1 


Q ss_pred             hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          214 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       214 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                       +.+.++     ..|+||-++|.+..+..  ..++++ ..++.+|...
T Consensus       195 -l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~  233 (286)
T PRK14175        195 -MASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP  233 (286)
T ss_pred             -HHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence             222222     38999999998766665  357887 8888988643

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.1  Score=45.66  Aligned_cols=80  Identities=24%  Similarity=0.318  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~----~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.+++|+|+ |++|...++.+...|++.|+.++++.++..    .+++.+...   .+|..+.+ .+.+.+.....  +
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            4578999987 999999999999999944888888766544    233344332   23443322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|.+|++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.50  E-value=0.18  Score=45.28  Aligned_cols=94  Identities=17%  Similarity=0.167  Sum_probs=56.4

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHcCCCEEEEEcCChh--hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          158 SSVAVFGLGAVGLA-AAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       158 ~~vlI~G~g~~G~~-a~~la~~~g~~~vv~v~~~~~--~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -+|.|+|+|.+|.. +..+.+.-+.+.+.+++.+++  .++.++++|.....    .+  +...+.......+|+||+++
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~----~~--ie~LL~~~~~~dIDiVf~AT   78 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA----EG--IDGLLAMPEFDDIDIVFDAT   78 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc----CC--HHHHHhCcCCCCCCEEEECC
Confidence            46899999999987 445555446644445555554  34667778864322    11  32222211113699999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +...+.+.+..++..  |+.++...
T Consensus        79 ~a~~H~e~a~~a~ea--Gk~VID~s  101 (302)
T PRK08300         79 SAGAHVRHAAKLREA--GIRAIDLT  101 (302)
T ss_pred             CHHHHHHHHHHHHHc--CCeEEECC
Confidence            886666666666665  55555543

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.50  E-value=0.56  Score=41.96  Aligned_cols=60  Identities=22%  Similarity=0.205  Sum_probs=45.8

Q ss_pred             hhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHHcCCceecCCC
Q 019414          149 LNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~--~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      .....++||++| |=+ +|+.|.+.+++|+.+|++-+++..  .+.+|+++++.+|+..+..+.
T Consensus        54 e~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          54 EKRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             HHcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            355679999944 445 499999999999999995444443  377999999999998765554

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.48  E-value=0.1  Score=47.43  Aligned_cols=70  Identities=19%  Similarity=0.239  Sum_probs=48.4

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceec-CCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|+|+|+ |-+|...+..+...|+ +|.++.++.++...+...+++.+. |..+.+     .+.+.. .++|+||++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~-----~l~~al-~g~d~Vi~~~~   73 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSLPE-----TLPPSF-KGVTAIIDAST   73 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCCHH-----HHHHHH-CCCCEEEECCC
Confidence            5899987 9999999998888898 888888887766555555654432 333221     222222 25899999865

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.46  E-value=0.13  Score=44.67  Aligned_cols=79  Identities=25%  Similarity=0.362  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCce---ecCCCCCChhHHHHHHHHhc--CCc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGV  227 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~  227 (341)
                      .+.++||+|+ |++|.+.+..+...|+ +|+.+++++..  .+.+++.+...   ..|..+.+ .+...+.+...  +++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIE-AIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHcCCC
Confidence            4678999987 9999999988888999 88888776522  23344444321   23433322 13323333222  369


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+++++.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.45  E-value=0.5  Score=35.75  Aligned_cols=92  Identities=22%  Similarity=0.279  Sum_probs=60.3

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |+|.|.|.+|...++.++..+. +|+.++.++++.+.+++.|... +..+..+   .+.+++..-..++.++-+.+..+.
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~-i~gd~~~---~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEV-IYGDATD---PEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEE-EES-TTS---HHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccc-ccccchh---hhHHhhcCccccCEEEEccCCHHH
Confidence            5788999999999999999665 8999999999999999988653 3233222   223444333478888888766442


Q ss_pred             ---HHHHHHHhcCCCcEEEEE
Q 019414          240 ---MISAFECVHDGWGVAVLV  257 (341)
Q Consensus       240 ---~~~~~~~l~~~~g~~v~~  257 (341)
                         +....+.+.+. .+++..
T Consensus        76 n~~~~~~~r~~~~~-~~ii~~   95 (116)
T PF02254_consen   76 NLLIALLARELNPD-IRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHTTT-SEEEEE
T ss_pred             HHHHHHHHHHHCCC-CeEEEE
Confidence               22333444554 455443

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.44  E-value=0.2  Score=42.98  Aligned_cols=105  Identities=19%  Similarity=0.292  Sum_probs=61.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh------hhHHHH--HHcCCcee---------cCCCCC----Chh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS------KRFEEA--KKFGVTDF---------VNTSEH----DRP  214 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~------~~~~~~--~~~g~~~v---------v~~~~~----~~~  214 (341)
                      +.++|+|+|.|++|..++..+-+.|..++..++.++      .|+-.+  ...|-..+         +|+.-.    +..
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            457899999999999999999999998888887654      222111  12221110         122111    001


Q ss_pred             -HHHHHHHHhcCCccEEEeccCChHHHHHHHH-HhcCCCcEEEEEccCC
Q 019414          215 -IQEVIAEMTNGGVDRSVECTGNIDNMISAFE-CVHDGWGVAVLVGVPS  261 (341)
Q Consensus       215 -~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~-~l~~~~g~~v~~g~~~  261 (341)
                       -.+.+.++...++|+|+||.-+-..--.++. |.+.+ -.++..+...
T Consensus       109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag  156 (263)
T COG1179         109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG  156 (263)
T ss_pred             hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence             1233455555689999999865443333333 44444 5556555433

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.43  E-value=0.54  Score=39.80  Aligned_cols=99  Identities=13%  Similarity=0.018  Sum_probs=56.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .|.+|||+|+|.+|...+..+...|+ .|+++.....+  .+++.+ +.- ......    +...    .-.++|+||-+
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~----~~~~----~l~~adlViaa   77 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKI-RWKQKE----FEPS----DIVDAFLVIAA   77 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE-EEEecC----CChh----hcCCceEEEEc
Confidence            46789999999999998888888898 77777554221  122222 211 111111    1100    01268999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccc
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM  267 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~  267 (341)
                      ++.++.-....... .. +.++...+......+.
T Consensus        78 T~d~elN~~i~~~a-~~-~~lvn~~d~~~~~~f~  109 (202)
T PRK06718         78 TNDPRVNEQVKEDL-PE-NALFNVITDAESGNVV  109 (202)
T ss_pred             CCCHHHHHHHHHHH-Hh-CCcEEECCCCccCeEE
Confidence            98865544444444 43 5566554433333333

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.12  Score=45.26  Aligned_cols=78  Identities=19%  Similarity=0.290  Sum_probs=50.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-e--cCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+    ++.+... .  .|..+.+ ...+.+.+...  ++
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   83 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEA-YAKALVALAVERFGG   83 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHhcCC
Confidence            568999987 9999999988888999 888888887775543    2234322 1  2333322 12222332222  37


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus        84 id~li~~ag~   93 (254)
T PRK07478         84 LDIAFNNAGT   93 (254)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK06196 oxidoreductase; Provisional

Probab=95.40  E-value=0.13  Score=46.70  Aligned_cols=78  Identities=19%  Similarity=0.302  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC-Cce-ecCCCCCChhHHHHHHHHhc--CCccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g-~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      .+.++||+|+ |++|.+++..+...|+ +|+.+.++.++.+.+ .++. +.. ..|..+.+ .+.+.+.+...  +++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~-~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLE-SVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHH-HHHHHHHHHHhcCCCCCE
Confidence            3568999987 9999999988888899 888888887765443 2332 211 23333321 13233333222  37999


Q ss_pred             EEeccC
Q 019414          230 SVECTG  235 (341)
Q Consensus       230 vld~~g  235 (341)
                      +|++.|
T Consensus       103 li~nAg  108 (315)
T PRK06196        103 LINNAG  108 (315)
T ss_pred             EEECCC
Confidence            999887

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.38  E-value=0.15  Score=43.95  Aligned_cols=78  Identities=18%  Similarity=0.228  Sum_probs=49.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      +.++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+.+++.++.. ..|..+.+ ...+.+.+...  +++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTNA-GIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCHH-HHHHHHHHHHhhCCCccEEE
Confidence            357899987 9999999998888999 88888777643 33445555432 23433322 13333333222  3699999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      ++.|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            98773

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.37  E-value=0.13  Score=44.72  Aligned_cols=79  Identities=20%  Similarity=0.315  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCCh--hHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDR--PIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~~~d  228 (341)
                      ++.+++|+|+ |++|.+.++.+...|+ +|+.+++++++.+. .++++...   ..|..+.+.  .+.+.+.+. .+++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            3578999987 9999999999999999 88889888766544 34455432   123322210  122222222 13689


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998873

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.37  E-value=0.074  Score=47.29  Aligned_cols=98  Identities=21%  Similarity=0.185  Sum_probs=69.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc-
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT-  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~-  234 (341)
                      +..+|.|+|+|.+|.-++.+|.-+|+ .|...+.+.+|++.+..+-..++.-..+....+.+.+.     +.|++|.++ 
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVL  240 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVL  240 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEE
Confidence            34568889999999999999999999 99999999999999888655443222222112333332     478888753 


Q ss_pred             --CC--hH-HHHHHHHHhcCCCcEEEEEccC
Q 019414          235 --GN--ID-NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       235 --g~--~~-~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                        |.  |. ..++.++.+.|+ +.++.+...
T Consensus       241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiD  270 (371)
T COG0686         241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAID  270 (371)
T ss_pred             ecCCCCceehhHHHHHhcCCC-cEEEEEEEc
Confidence              21  22 456778999997 999988653

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.13  Score=44.98  Aligned_cols=77  Identities=18%  Similarity=0.198  Sum_probs=49.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCC----c-eecCCCCCChhHHHHHHHHhc--CCc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV----T-DFVNTSEHDRPIQEVIAEMTN--GGV  227 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~----~-~vv~~~~~~~~~~~~i~~~~~--~~~  227 (341)
                      +.++||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ +..    . ..+|..+.+ .+.+.+.+...  +.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDAD-ALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHH-HHHHHHHHHHHhCCCC
Confidence            357999986 9999999888888899 88888888877654432 321    1 123443322 23333333222  258


Q ss_pred             cEEEeccC
Q 019414          228 DRSVECTG  235 (341)
Q Consensus       228 d~vld~~g  235 (341)
                      |+++++.|
T Consensus        80 d~lv~~ag   87 (257)
T PRK07024         80 DVVIANAG   87 (257)
T ss_pred             CEEEECCC
Confidence            99999876

>PRK08317 hypothetical protein; Provisional

Probab=95.35  E-value=0.099  Score=45.07  Aligned_cols=105  Identities=24%  Similarity=0.332  Sum_probs=68.1

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHc--CCceecCCCCCChhHHHHHHHHhcC
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF--GVTDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~--g~~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      .+..++.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.  .....+.....+  ...  .....+
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~--~~~~~~   86 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADG--LPFPDG   86 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--ccc--CCCCCC
Confidence            4567888999999999875 888888888773 34899999999988887764  111001011011  000  011224


Q ss_pred             CccEEEecc-----CC-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          226 GVDRSVECT-----GN-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       226 ~~d~vld~~-----g~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .+|+|+-..     .. ...+..+.++|+++ |.+++...
T Consensus        87 ~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  125 (241)
T PRK08317         87 SFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT  125 (241)
T ss_pred             CceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence            788887421     12 34688999999998 99987753

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.35  E-value=0.084  Score=53.17  Aligned_cols=75  Identities=24%  Similarity=0.304  Sum_probs=52.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHHcCCceecCCCC-CCh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSE-HDR  213 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~---------------------~~~~~~~~g~~~vv~~~~-~~~  213 (341)
                      .+.+|+|+|+|+.|+.++..++..|+ .|+++++.+.                     ..+.++++|++...+..- .+.
T Consensus       326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i  404 (654)
T PRK12769        326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI  404 (654)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence            57899999999999999999999999 7888876543                     345667788765443321 110


Q ss_pred             hHHHHHHHHhcCCccEEEeccCC
Q 019414          214 PIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       214 ~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      .+.+ +   . ..+|.||.++|.
T Consensus       405 ~~~~-~---~-~~~DavilAtGa  422 (654)
T PRK12769        405 SLES-L---L-EDYDAVFVGVGT  422 (654)
T ss_pred             CHHH-H---H-hcCCEEEEeCCC
Confidence            1211 1   1 259999998885

>PRK08265 short chain dehydrogenase; Provisional

Probab=95.33  E-value=0.13  Score=45.32  Aligned_cols=79  Identities=25%  Similarity=0.292  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+. .++++...   ..|..+.+ .+.+.+.+...  +.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDA-AIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence            3578999987 9999999998888999 89998888776544 34444321   23443322 12222332221  3689


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99998763

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.31  E-value=0.13  Score=45.58  Aligned_cols=77  Identities=17%  Similarity=0.252  Sum_probs=50.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CCc-e--ecCCCCCChhHHHHHHHHhc--CCccEE
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT-D--FVNTSEHDRPIQEVIAEMTN--GGVDRS  230 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~-~--vv~~~~~~~~~~~~i~~~~~--~~~d~v  230 (341)
                      .++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+++. +.. .  ..|..+.+ .+.+.+.+...  +++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA-AVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            46899986 9999999888888898 888888988877665542 221 1  23333322 13333332221  368999


Q ss_pred             EeccCC
Q 019414          231 VECTGN  236 (341)
Q Consensus       231 ld~~g~  236 (341)
                      |++.|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            998763

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.31  E-value=0.16  Score=43.79  Aligned_cols=78  Identities=22%  Similarity=0.303  Sum_probs=50.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCcee---cCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF---VNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~v---v~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +.++||+|+ |.+|...++.+...|+ .|+.+.+++++.+.    +++.+....   .|..+.+ .+.+.+.+...  ++
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   82 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEA-AVRALIEAAVEAFGA   82 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHhCC
Confidence            468999987 9999999988888899 68999888776443    233343221   3443322 13333332221  36


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|.++++.|.
T Consensus        83 id~vi~~ag~   92 (246)
T PRK05653         83 LDILVNNAGI   92 (246)
T ss_pred             CCEEEECCCc
Confidence            8999998764

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.30  E-value=0.18  Score=43.66  Aligned_cols=79  Identities=25%  Similarity=0.263  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |.+|...+..+...|. +|+.+++++++.+.+.    +.+...   ..|..+.+ .+...+.....  +
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPE-AIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            3467999986 9999999999988999 8999988877654432    223221   23333322 12222332222  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        83 ~id~lv~~ag~   93 (241)
T PRK07454         83 CPDVLINNAGM   93 (241)
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.11  Score=45.72  Aligned_cols=79  Identities=25%  Similarity=0.300  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----c-CCce----ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F-GVTD----FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~-g~~~----vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+    . +...    ..|..+.+ .+.+.+.+... 
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence            4678999987 8999999999988999 88888888876553321    1 1111    22443322 12222222221 


Q ss_pred             -CCccEEEeccCC
Q 019414          225 -GGVDRSVECTGN  236 (341)
Q Consensus       225 -~~~d~vld~~g~  236 (341)
                       +++|+++++.|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence             369999999873

>PRK08267 short chain dehydrogenase; Provisional

Probab=95.28  E-value=0.16  Score=44.49  Aligned_cols=77  Identities=17%  Similarity=0.234  Sum_probs=51.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cC-Cc---eecCCCCCChhHHHHHHHHh---cCCcc
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VT---DFVNTSEHDRPIQEVIAEMT---NGGVD  228 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g-~~---~vv~~~~~~~~~~~~i~~~~---~~~~d  228 (341)
                      .++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ .+ ..   ..+|..+.+ .+.+.+....   .+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence            36899987 9999999998888898 88888888887665533 32 11   123444322 1333333321   34799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99998874

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.27  E-value=0.31  Score=42.18  Aligned_cols=35  Identities=37%  Similarity=0.478  Sum_probs=30.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ..+|+|+|.|++|..++..+-+.|..+++.++.+.
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            46799999999999999999999998999888654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.27  E-value=0.24  Score=45.34  Aligned_cols=94  Identities=17%  Similarity=0.181  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCChhhHHHH-HH----cCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVDRSSKRFEEA-KK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la-~~~g~~~vv~v~~~~~~~~~~-~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      +...+++|+|+|..|.+.+..+ ...+.++|....+++++.+.+ ++    ++.... .+.+    ..+.+     ...|
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~----~~~~~-----~~aD  194 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS----ADEAI-----EEAD  194 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC----HHHHH-----hcCC
Confidence            3457899999999998776544 467888999999998886543 32    343211 1221    33333     2489


Q ss_pred             EEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          229 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       229 ~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +|+.|+++.+.+ .. ..++++ -++..+|...
T Consensus       195 iVi~aT~s~~p~-i~-~~l~~G-~hV~~iGs~~  224 (325)
T PRK08618        195 IIVTVTNAKTPV-FS-EKLKKG-VHINAVGSFM  224 (325)
T ss_pred             EEEEccCCCCcc-hH-HhcCCC-cEEEecCCCC
Confidence            999998875443 33 788997 8888888643

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.27  E-value=0.15  Score=46.87  Aligned_cols=35  Identities=34%  Similarity=0.441  Sum_probs=31.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      +.+|+|+|+|++|..++..+-..|...++.++.+.
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            46799999999999999999999998899888764

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.25  E-value=0.08  Score=46.76  Aligned_cols=76  Identities=26%  Similarity=0.366  Sum_probs=48.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEEe
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vld  232 (341)
                      +.+++|+|+ |++|...++.+...|+ +|++++++.++.+..  .+... ..|..+.+ .+.+.+.....  +++|++|+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~-~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTDDA-SVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCCHH-HHHHHHHHHHHhCCCCCEEEE
Confidence            457999987 9999999988888899 889888887654322  12222 23333322 13333333222  36999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9874

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.25  E-value=0.13  Score=44.86  Aligned_cols=77  Identities=22%  Similarity=0.337  Sum_probs=48.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-eec--CCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFV--NTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vv--~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      |.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    .+.. ..+  |..+.+ .+.+.+.+...  ++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPE-DVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHhCC
Confidence            457899987 9999999999999999 88888888776544322    2221 122  333221 12222222221  36


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|+++++.|
T Consensus        79 id~lI~~ag   87 (252)
T PRK07677         79 IDALINNAA   87 (252)
T ss_pred             ccEEEECCC
Confidence            899999876

>PRK12939 short chain dehydrogenase; Provisional

Probab=95.25  E-value=0.19  Score=43.58  Aligned_cols=79  Identities=24%  Similarity=0.265  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      ++.++||+|+ |++|...+..+...|+ +|+.+++++++.+..    ++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA-SVQRFFDAAAAALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999999888999 788888887765433    2233221   22433322 12222222111  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.25  E-value=0.11  Score=43.71  Aligned_cols=99  Identities=16%  Similarity=0.161  Sum_probs=59.4

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .......++.+||-+|+|. |..+..+++ .|. .|++++.+++..+.+++.    +..  +.....+  ...  .. .+
T Consensus        23 ~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~d--~~~--~~-~~   92 (195)
T TIGR00477        23 REAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDAYD--INA--AA-LN   92 (195)
T ss_pred             HHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEecc--chh--cc-cc
Confidence            3444555567899998753 666666666 477 999999999877766542    322  1111111  100  01 12


Q ss_pred             CCccEEEecc-----CC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRSVECT-----GN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~vld~~-----g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.+|+|+...     ..   ...++.+.+.|+|+ |.++.+.
T Consensus        93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~  133 (195)
T TIGR00477        93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA  133 (195)
T ss_pred             CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence            3699987542     11   24677888999998 9865554

Part of a tellurite-reducing operon tehA and tehB

>PLN02823 spermine synthase

Probab=95.25  E-value=0.19  Score=46.03  Aligned_cols=99  Identities=13%  Similarity=0.119  Sum_probs=61.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eec-CCCCC--ChhHHHHHHHHhcCCccEEE
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFV-NTSEH--DRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~vv-~~~~~--~~~~~~~i~~~~~~~~d~vl  231 (341)
                      ..+|||+|+|. |.++..+++..+..+|++++.+++-.+.+++.-..  ..+ |.+-.  ..+..+.++ ...+.+|+||
T Consensus       104 pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~-~~~~~yDvIi  181 (336)
T PLN02823        104 PKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELE-KRDEKFDVII  181 (336)
T ss_pred             CCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHh-hCCCCccEEE
Confidence            46899998763 55566777777777999999999999999874321  011 00000  001333332 2345899986


Q ss_pred             -eccC-----------ChHHHH-HHHHHhcCCCcEEEEEc
Q 019414          232 -ECTG-----------NIDNMI-SAFECVHDGWGVAVLVG  258 (341)
Q Consensus       232 -d~~g-----------~~~~~~-~~~~~l~~~~g~~v~~g  258 (341)
                       |...           +.+-++ .+.+.|+++ |.++.-.
T Consensus       182 ~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~  220 (336)
T PLN02823        182 GDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA  220 (336)
T ss_pred             ecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence             5321           112455 678899998 9887653

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.24  E-value=0.26  Score=39.96  Aligned_cols=82  Identities=16%  Similarity=0.180  Sum_probs=48.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|+|+|+|.+|.--++.+...|+ .|++++  ++..+.+++++.-.. +.+.    +.    +..-.++|+|+-+++
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~----~~----~~dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKT----FS----NDDIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eecc----cC----hhcCCCceEEEECCC
Confidence            46789999999999998888888898 777773  333333444542111 1111    11    001136899999988


Q ss_pred             ChHHHHHHHHHhcC
Q 019414          236 NIDNMISAFECVHD  249 (341)
Q Consensus       236 ~~~~~~~~~~~l~~  249 (341)
                      .++.-..+....+.
T Consensus        80 d~e~N~~i~~~a~~   93 (157)
T PRK06719         80 QHAVNMMVKQAAHD   93 (157)
T ss_pred             CHHHHHHHHHHHHH
Confidence            75443334333334

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.24  Score=42.65  Aligned_cols=79  Identities=14%  Similarity=0.137  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCC--hhHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHD--RPIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~--~~~~~~i~~~~~~  225 (341)
                      +|.+++|+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+    ++.+.+.   ..|..+.+  ..+.+.+.+..++
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3678999987 8999999888888999 788888888775543    2334332   12332221  0122333333332


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      .+|++|++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            6999999886

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.14  Score=44.73  Aligned_cols=79  Identities=25%  Similarity=0.336  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c---CCc---eecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GVT---DFVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~---g~~---~vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      ++.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ +   +..   ...|..+.+ .+...+.+...  +
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDED-QCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHH-HHHHHHHHHHHHcC
Confidence            4578999987 9999999998889999 88888888876544322 2   321   123433322 12222322221  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      .+|++|++.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            68999998763

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.23  E-value=0.27  Score=42.01  Aligned_cols=102  Identities=22%  Similarity=0.175  Sum_probs=62.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceecC-------CCCCChh-HHHHHHHHh-
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEMT-  223 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vv~-------~~~~~~~-~~~~i~~~~-  223 (341)
                      ..++.+||+.|+|. |.-++.+|. .|. .|++++.++...+.+ ++.+......       +...+.. ....+.++. 
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            35778999999874 788888875 698 999999999988874 3333321000       0000000 000000111 


Q ss_pred             --cCCccEEEeccCC--------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 --NGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 --~~~~d~vld~~g~--------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                        .+.||.|+|+..-        ...++.+.++|+|+ |++.+...
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence              1358999996431        23577899999998 98776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.20  E-value=0.18  Score=44.24  Aligned_cols=81  Identities=20%  Similarity=0.261  Sum_probs=48.9

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhh-HH----HHHHcCCc--ee--cCCCCCChhHHHHHHHH
Q 019414          154 PERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKR-FE----EAKKFGVT--DF--VNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       154 ~~~g~~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~-~~----~~~~~g~~--~v--v~~~~~~~~~~~~i~~~  222 (341)
                      +..+.++||+|+ |++|.+.++-+... |+ +|+.+++++++ .+    .+++.+..  .+  .|..+.+ .+.+.+.+.
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-~~~~~~~~~   82 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD-SHPKVIDAA   82 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH-HHHHHHHHH
Confidence            456778999987 99999988776666 47 88888887764 33    23333431  12  3333322 122223332


Q ss_pred             hc-CCccEEEeccCC
Q 019414          223 TN-GGVDRSVECTGN  236 (341)
Q Consensus       223 ~~-~~~d~vld~~g~  236 (341)
                      .. +++|+++.+.|.
T Consensus        83 ~~~g~id~li~~ag~   97 (253)
T PRK07904         83 FAGGDVDVAIVAFGL   97 (253)
T ss_pred             HhcCCCCEEEEeeec
Confidence            22 479999887764

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.15  Score=44.52  Aligned_cols=79  Identities=20%  Similarity=0.293  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.    +++.+...   ..|..+.+ .+.+.+.+..  .+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDA-EVKALVEQTIAAYG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence            3678999987 9999999888888898 78889888766433    23334321   13333221 1222222221  13


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            68999998773

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.17  E-value=0.17  Score=44.04  Aligned_cols=35  Identities=31%  Similarity=0.443  Sum_probs=30.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      +.+|+|.|+|++|..+++.+...|..+++.++.+.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            46799999999999999999999998888887654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08589 short chain dehydrogenase; Validated

Probab=95.16  E-value=0.14  Score=45.40  Aligned_cols=79  Identities=23%  Similarity=0.312  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCCc---eecCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVT---DFVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~---~g~~---~vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      ++.++||+|+ +++|.+.++.+...|+ +|+.++++++..+.+++   .+..   ..+|..+.+ .....+.+...  ++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQ-QVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHHHcCC
Confidence            4678999987 9999999888888899 88888888433333333   2322   123433322 12222322221  36


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            8999998763

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.16  E-value=0.29  Score=38.78  Aligned_cols=32  Identities=28%  Similarity=0.396  Sum_probs=28.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      +|+|+|+|++|...++.+...|.+++..++.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            48899999999999999999999888888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.16  E-value=0.16  Score=45.12  Aligned_cols=78  Identities=15%  Similarity=0.243  Sum_probs=47.9

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHHcCCcee--cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTDF--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~----~~~~~g~~~v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ +  ++|.+.++.+...|+ +|+.+.++++..+    ..+++|....  .|..+.+ ...+.+.+...  
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~-~v~~~~~~~~~~~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIA-SVDAVFEALEKKW   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHH-HHHHHHHHHHHHh
Confidence            3578899987 4  899999988888999 7888877653322    2233453222  3443322 12222332222  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +.+|+++++.|
T Consensus        84 g~iD~lVnnAG   94 (271)
T PRK06505         84 GKLDFVVHAIG   94 (271)
T ss_pred             CCCCEEEECCc
Confidence            47999999887

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.15  E-value=0.12  Score=45.16  Aligned_cols=79  Identities=28%  Similarity=0.416  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .+.++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.    +++.|...   ..|..+.+ .+.+.+.+..  -+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD-AVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence            4678999987 9999999988888899 88888888766443    22233221   12443322 1222232222  13


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            69999998874

>PRK08264 short chain dehydrogenase; Validated

Probab=95.14  E-value=0.1  Score=44.97  Aligned_cols=75  Identities=19%  Similarity=0.298  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--e-ecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--D-FVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~-vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      .+.++||+|+ |.+|...++.+...|+++|+.++++.++.+.   .+..  . ..|..+.+ .+.+.+.. . +.+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~-~~~~~~~~-~-~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPA-SVAAAAEA-A-SDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHH-HHHHHHHh-c-CCCCEEE
Confidence            4568999986 9999999999988898678888888766543   2221  1 12333322 12222222 1 2589999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      .+.|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            98875

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.14  E-value=0.16  Score=44.47  Aligned_cols=79  Identities=23%  Similarity=0.280  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCcee---cCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF---VNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~v---v~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .+.++||+|+ |.+|...++.+...|+ .|+.+.+++++.+.    +++.+....   .|..+.+ .+.+.+.+..  .+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNED-AVNAGIDKVAERFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            3678999987 9999999999989999 78888888765443    233444321   2333322 1222222211  13


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++.+.|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999998874

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.13  E-value=0.19  Score=44.13  Aligned_cols=78  Identities=19%  Similarity=0.281  Sum_probs=46.8

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHHcCCcee--cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTDF--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~g---~~G~~a~~la~~~g~~~vv~v~~~~~~~~----~~~~~g~~~v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|.++||+|++   ++|.+.++.+...|+ +|+.++++++..+    ..++++....  .|..+.+ +..+.+.+...  
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPG-QLEAVFARIAEEW   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHH-HHHHHHHHHHHHc
Confidence            46789999863   899999988888999 7877777754322    2233333222  2333221 12222222221  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|+++++.|
T Consensus        87 g~ld~lv~nAg   97 (258)
T PRK07533         87 GRLDFLLHSIA   97 (258)
T ss_pred             CCCCEEEEcCc
Confidence            47999998876

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.14  Score=46.92  Aligned_cols=79  Identities=19%  Similarity=0.273  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+.+ .+.+.+.....  +
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence            4568999987 9999999998888999 888888888775533    3345432   23443322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999998874

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=95.13  E-value=0.19  Score=45.09  Aligned_cols=57  Identities=18%  Similarity=0.108  Sum_probs=47.2

Q ss_pred             hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHHcCCceec
Q 019414          149 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKFGVTDFV  206 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~---~~~~~~~~~~~g~~~vv  206 (341)
                      .....+.||.+.||=.+ |++|...+-++...|+ +++.+..   +.||+..++++|+..+.
T Consensus        95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence            34567899999999986 9999999999999999 6666654   56888899999997653

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.16  Score=44.64  Aligned_cols=77  Identities=23%  Similarity=0.327  Sum_probs=48.7

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--CCc
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGV  227 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~  227 (341)
                      .++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+    +..+...   ..|..+.+ .+.+.+.+...  +++
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAE-ACERLIEAAVARFGGI   79 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence            47899987 9999999998888898 889998887664432    2233321   12333221 13333333322  368


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |++|++.|.
T Consensus        80 d~vi~~ag~   88 (263)
T PRK06181         80 DILVNNAGI   88 (263)
T ss_pred             CEEEECCCc
Confidence            999999863

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.11  E-value=0.16  Score=46.71  Aligned_cols=34  Identities=38%  Similarity=0.485  Sum_probs=30.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      ..+|+|+|+|++|..+++.+...|...+..++.+
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4679999999999999999999999899999876

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.17  Score=45.93  Aligned_cols=78  Identities=19%  Similarity=0.218  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc-----CCce---ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVTD---FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~~---vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .|.+++|+|+ +++|.+++..+...|+ +|+.+.+++++.+.+ +++     +...   .+|..+.+ ...+.+.+... 
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~-sv~~~~~~~~~~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLA-SVAALGEQLRAE   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHH-HHHHHHHHHHHh
Confidence            3678999987 9999999988888998 888888887765432 222     1111   23443322 12222222221 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|++|++.|
T Consensus        91 ~~~iD~li~nAG  102 (313)
T PRK05854         91 GRPIHLLINNAG  102 (313)
T ss_pred             CCCccEEEECCc
Confidence             36999998876

>PRK06194 hypothetical protein; Provisional

Probab=95.09  E-value=0.15  Score=45.46  Aligned_cols=78  Identities=18%  Similarity=0.263  Sum_probs=48.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc---CCce---ecCCCCCChhHHHHHHHHh--cCC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTD---FVNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~---vv~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      +.++||+|+ |++|...+..+...|+ +|+.++++.++.+.. +++   +...   ..|..+.+ .+.+.+....  .++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~g~   83 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAA-QVEALADAALERFGA   83 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            568999987 9999999988888899 888888876654432 222   3321   12333221 1222222221  136


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|++.|.
T Consensus        84 id~vi~~Ag~   93 (287)
T PRK06194         84 VHLLFNNAGV   93 (287)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.08  E-value=0.14  Score=45.32  Aligned_cols=76  Identities=22%  Similarity=0.336  Sum_probs=48.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce----ecCCCCCChhHHHHHHHHhc--CCc
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQEVIAEMTN--GGV  227 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~----vv~~~~~~~~~~~~i~~~~~--~~~  227 (341)
                      +++|+|+ |++|..+++.+...|+ .|+.+++++++.+.+    +..+...    ..|..+.+ .+.+.+.+...  +++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAHGSM   79 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhcCCC
Confidence            5899987 9999999998888998 788888887664432    2233321    23443322 12222222211  369


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |++|++.|.
T Consensus        80 d~lv~~ag~   88 (272)
T PRK07832         80 DVVMNIAGI   88 (272)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.07  E-value=0.2  Score=42.79  Aligned_cols=35  Identities=23%  Similarity=0.308  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      ...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            34679999999999999999999999889999877

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.06  E-value=0.16  Score=44.22  Aligned_cols=76  Identities=22%  Similarity=0.330  Sum_probs=49.4

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce---ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      +++|+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ ++...   ..|..+.+ .+.+.+.+...  +++|.++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRA-AIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            5889986 9999999999888999 88999898877665433 34321   12333321 12232332222  3699999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      .+.|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            88763

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.04  E-value=0.16  Score=44.23  Aligned_cols=78  Identities=22%  Similarity=0.288  Sum_probs=48.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc--CCc-ee--cCCCCCChhHHHHHHHHhc--CCc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF--GVT-DF--VNTSEHDRPIQEVIAEMTN--GGV  227 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~--g~~-~v--v~~~~~~~~~~~~i~~~~~--~~~  227 (341)
                      +.++||+|+ |.+|...++.+...|+ +|+.+.++.++.+... ++  +.. ..  .|..+.+ ...+.+.+...  +++
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAE-AVEALVDFVAARWGRL   82 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCCC
Confidence            568999987 9999999888777898 8888888876544322 22  221 11  2333221 12222222221  379


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+++.+.|.
T Consensus        83 d~vi~~ag~   91 (252)
T PRK06138         83 DVLVNNAGF   91 (252)
T ss_pred             CEEEECCCC
Confidence            999998874

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.04  E-value=0.9  Score=33.02  Aligned_cols=76  Identities=22%  Similarity=0.367  Sum_probs=48.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC---CCEEE-EEcCChhhHHHH-HHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          159 SVAVFGLGAVGLAAAEGARIAG---ASRII-GVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g---~~~vv-~v~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      +|.|+|+|.+|.+.+.-....|   . +|+ +..+++++.+.+ +++++......      ..+.+.+     .|+||-|
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~-----advvila   68 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATADD------NEEAAQE-----ADVVILA   68 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEESEE------HHHHHHH-----TSEEEE-
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccccCC------hHHhhcc-----CCEEEEE
Confidence            4778899999999988888888   5 666 548999887765 55664322201      3333332     7999999


Q ss_pred             cCChHHHHHHHHHh
Q 019414          234 TGNIDNMISAFECV  247 (341)
Q Consensus       234 ~g~~~~~~~~~~~l  247 (341)
                      +-. ..+...++.+
T Consensus        69 v~p-~~~~~v~~~i   81 (96)
T PF03807_consen   69 VKP-QQLPEVLSEI   81 (96)
T ss_dssp             S-G-GGHHHHHHHH
T ss_pred             ECH-HHHHHHHHHH
Confidence            854 4444444433

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.02  E-value=0.19  Score=44.07  Aligned_cols=79  Identities=29%  Similarity=0.409  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc---eecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT---DFVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~---~vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      ++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.    ..+..   ...|..+.+ .+.+.+.+...  +
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~-~i~~~~~~~~~~~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEA-DIERLAEETLERFG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            4678999986 9999999988888999 8888888877655433    22322   123443322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|.++.+.|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            68999998763

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.01  E-value=0.18  Score=44.20  Aligned_cols=78  Identities=21%  Similarity=0.242  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCCce---ecCCCCCChhHHHHHHHHh--cCC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      ++.++||+|+ |++|...+..+...|+ +|+.++++++..+..++   .+...   ..|..+.+ ...+.+.+..  .++
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPA-SVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            3578999986 9999999988888899 78888887754443333   23221   23333321 1222222221  136


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|++|.+.|
T Consensus        83 id~vi~~ag   91 (263)
T PRK08226         83 IDILVNNAG   91 (263)
T ss_pred             CCEEEECCC
Confidence            899999887

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.01  E-value=0.36  Score=43.05  Aligned_cols=97  Identities=16%  Similarity=0.119  Sum_probs=64.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-e-ec-CCCCC--ChhHHHHHHHHhcCCccEEE-
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-D-FV-NTSEH--DRPIQEVIAEMTNGGVDRSV-  231 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~-vv-~~~~~--~~~~~~~i~~~~~~~~d~vl-  231 (341)
                      .+|||+|+|. |-.+-.++|....+++++++-+++=.++++++-.. . .. |++-.  -.+..+-+++.. .+||+|| 
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~-~~fDvIi~  155 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCE-EKFDVIIV  155 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCC-CcCCEEEE
Confidence            4899997653 55566788888888999999999999999884321 1 11 11111  001333343332 3799986 


Q ss_pred             eccCC---------hHHHHHHHHHhcCCCcEEEEE
Q 019414          232 ECTGN---------IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       232 d~~g~---------~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      |+...         .+-.+.+.++|+++ |.++..
T Consensus       156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q  189 (282)
T COG0421         156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ  189 (282)
T ss_pred             cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence            55433         45678899999998 998887

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.00  E-value=0.17  Score=44.94  Aligned_cols=80  Identities=29%  Similarity=0.323  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc------eecCCCCCC--hhHHHHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT------DFVNTSEHD--RPIQEVIAEM  222 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~------~vv~~~~~~--~~~~~~i~~~  222 (341)
                      .|..+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+....    .+.+      .+.|....+  ....+...+.
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            4677899986 8999999999999999 89999899888654332    2222      233433221  1233333344


Q ss_pred             hcCCccEEEeccCC
Q 019414          223 TNGGVDRSVECTGN  236 (341)
Q Consensus       223 ~~~~~d~vld~~g~  236 (341)
                      ..+++|++++..|.
T Consensus        86 ~~GkidiLvnnag~   99 (270)
T KOG0725|consen   86 FFGKIDILVNNAGA   99 (270)
T ss_pred             hCCCCCEEEEcCCc
Confidence            45679999987764

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.00  E-value=0.14  Score=43.56  Aligned_cols=101  Identities=22%  Similarity=0.256  Sum_probs=62.1

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ....+++++++||-+|+|. |..+..+++.. . .|++++.+++..+.+++    .+.+.+ +....+  ..+.+.  ..
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~~~~~--~~  142 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGD--GWKGWP--AY  142 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECC--cccCCC--cC
Confidence            4567788999999998753 44455566554 3 89999999887665543    344321 111111  110000  11


Q ss_pred             CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.||+|+-........+.+.+.|+++ |+++..-
T Consensus       143 ~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~  175 (212)
T PRK00312        143 APFDRILVTAAAPEIPRALLEQLKEG-GILVAPV  175 (212)
T ss_pred             CCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence            47999875544445667888999998 9887654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=94.99  E-value=0.19  Score=43.92  Aligned_cols=77  Identities=25%  Similarity=0.379  Sum_probs=49.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce---ecCCCCCChhHHHHHHHHhc--CCccE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      +.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. +++...   ..|..+.+ ...+.+.+...  +++|+
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQD-SIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            568999987 9999999999988999 8888988888765543 333211   22332221 12222222221  36899


Q ss_pred             EEeccC
Q 019414          230 SVECTG  235 (341)
Q Consensus       230 vld~~g  235 (341)
                      ++++.|
T Consensus        84 li~~ag   89 (257)
T PRK07067         84 LFNNAA   89 (257)
T ss_pred             EEECCC
Confidence            999876

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.99  E-value=0.24  Score=38.47  Aligned_cols=95  Identities=19%  Similarity=0.310  Sum_probs=55.8

Q ss_pred             EEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCh--hh-HHHHHHcCCceecCCCCCChh-H----------------H
Q 019414          160 VAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSS--KR-FEEAKKFGVTDFVNTSEHDRP-I----------------Q  216 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g--~~~vv~v~~~~--~~-~~~~~~~g~~~vv~~~~~~~~-~----------------~  216 (341)
                      |.|+|+ |.+|.-++.+.+...  + +|++.....  ++ .+.++++.+..++..++...+ +                .
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~   79 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP   79 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence            568897 999999999999886  5 666654432  22 334667888776654432100 1                1


Q ss_pred             HHHHHHhc-CCccEEEeccCChHHHHHHHHHhcCCCcEEEE
Q 019414          217 EVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVL  256 (341)
Q Consensus       217 ~~i~~~~~-~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~  256 (341)
                      +.+.++.. ..+|+++.++.+...+.-.+..+..+ -++.+
T Consensus        80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~iaL  119 (129)
T PF02670_consen   80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIAL  119 (129)
T ss_dssp             HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEEE
T ss_pred             HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEEE
Confidence            11223333 36888888766667777777788764 44433

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK07856 short chain dehydrogenase; Provisional

Probab=94.95  E-value=0.13  Score=44.90  Aligned_cols=74  Identities=22%  Similarity=0.315  Sum_probs=47.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--c-eecCCCCCChhHHHHHHHHh--cCCccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T-DFVNTSEHDRPIQEVIAEMT--NGGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~~i~~~~--~~~~d~  229 (341)
                      .+.++||+|+ |++|.+.++.+...|+ .|+.++++.++    +..+.  . ...|..+.+ .+.+.+....  .+++|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPD-QVAALVDAIVERHGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            4678999987 9999999988888999 88888887665    11222  1 123433321 1222222221  136899


Q ss_pred             EEeccC
Q 019414          230 SVECTG  235 (341)
Q Consensus       230 vld~~g  235 (341)
                      +|++.|
T Consensus        79 vi~~ag   84 (252)
T PRK07856         79 LVNNAG   84 (252)
T ss_pred             EEECCC
Confidence            999876

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=94.94  E-value=0.38  Score=42.94  Aligned_cols=90  Identities=18%  Similarity=0.187  Sum_probs=57.5

Q ss_pred             EEEEECCCHHHHHH-HHHHHHcCCCEEEEEcCChhh--HHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~a-~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|+|.+|... ..+.+..+.+.+..++.++++  ++..+++|.....+.      +...+ +  ...+|+||++++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~~------~e~ll-~--~~dIDaV~iaTp   73 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAEG------VDGLL-A--NPDIDIVFDATS   73 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEECC------HHHHh-c--CCCCCEEEECCC
Confidence            58899999999855 556555567344445555543  456778886543311      22222 1  136999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ...+.+.+..++..  |+.++...
T Consensus        74 ~~~H~e~a~~al~a--Gk~VIdek   95 (285)
T TIGR03215        74 AKAHARHARLLAEL--GKIVIDLT   95 (285)
T ss_pred             cHHHHHHHHHHHHc--CCEEEECC
Confidence            87777777777776  56665543

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=94.94  E-value=0.15  Score=44.71  Aligned_cols=78  Identities=28%  Similarity=0.319  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~---~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++...+..++   .+.+.   ..|..+.+ ...+.+.+...  ++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence            3578999987 9999999998888999 88888887543333333   34322   23443321 12223333222  36


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|+++++.|
T Consensus        85 id~lv~nAg   93 (260)
T PRK12823         85 IDVLINNVG   93 (260)
T ss_pred             CeEEEECCc
Confidence            999999886

>PRK07576 short chain dehydrogenase; Provisional

Probab=94.93  E-value=0.23  Score=43.83  Aligned_cols=78  Identities=22%  Similarity=0.357  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      ++.++||+|+ |++|...++.+...|+ +|+.+++++++.+..    .+.+...   .+|..+.+ ++...+.+...  +
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYA-AVEAAFAQIADEFG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999998888999 899988887664332    2223221   23443321 13333333322  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            6899998775

>PRK08643 acetoin reductase; Validated

Probab=94.92  E-value=0.19  Score=43.93  Aligned_cols=78  Identities=21%  Similarity=0.273  Sum_probs=49.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.    +.+...   ..|..+.+ ...+.+.+...  ++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            457899987 9999999998888999 8888888876654332    223221   23333322 12222222221  36


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|++.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999998864

>PRK07574 formate dehydrogenase; Provisional

Probab=94.90  E-value=0.18  Score=47.06  Aligned_cols=89  Identities=17%  Similarity=0.208  Sum_probs=55.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|+..++.++.+|. +|++.+++....+..+++|+...   .+    +.+.+     ...|+|+-++.
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~---~~----l~ell-----~~aDvV~l~lP  257 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH---VS----FDSLV-----SVCDVVTIHCP  257 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec---CC----HHHHh-----hcCCEEEEcCC
Confidence            46789999999999999999999999 99999887644444444554211   11    22222     12577766554


Q ss_pred             ChH-H---H-HHHHHHhcCCCcEEEEEc
Q 019414          236 NID-N---M-ISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~~-~---~-~~~~~~l~~~~g~~v~~g  258 (341)
                      ..+ +   + +..+..++++ ..++.++
T Consensus       258 lt~~T~~li~~~~l~~mk~g-a~lIN~a  284 (385)
T PRK07574        258 LHPETEHLFDADVLSRMKRG-SYLVNTA  284 (385)
T ss_pred             CCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence            222 1   1 2345566665 6555554

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.90  E-value=0.19  Score=45.75  Aligned_cols=78  Identities=22%  Similarity=0.345  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCC---c-e--ecCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---T-D--FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~---~-~--vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .+.++||+|+ |++|..+++.+...|+ +|+.+.+++++.+.+ +++..   . .  ..|..+.+ .+.+.+.+..  .+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD-SVRRFVDDFRALGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence            3568999987 9999999988888898 888888888775433 33321   1 1  12333321 1222222221  23


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6999999877

>PRK07063 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.19  Score=44.08  Aligned_cols=79  Identities=22%  Similarity=0.250  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc-----CCc---eecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVT---DFVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~-----g~~---~vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++     +..   ...|..+.+ .+...+.+... 
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAA-SVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHH-HHHHHHHHHHHH
Confidence            3678999987 9999999998888999 7888888877654332 22     221   122333321 12222322221 


Q ss_pred             -CCccEEEeccCC
Q 019414          225 -GGVDRSVECTGN  236 (341)
Q Consensus       225 -~~~d~vld~~g~  236 (341)
                       +++|++|++.|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence             369999998873

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.31  Score=42.67  Aligned_cols=77  Identities=27%  Similarity=0.406  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCc-ee--cCCCCCChhHHHHHHHHhcCC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT-DF--VNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~-~v--v~~~~~~~~~~~~i~~~~~~~  226 (341)
                      .+.++||+|+ +++|...++.+...|+ .|+.+++++++.+.+.+ +    +.. ..  .|..+.+ .+.+.+.. . ++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~~-~-g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPE-AREQLAAE-A-GD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHH-h-CC
Confidence            3678999987 8999999988888999 89999888776554322 1    221 11  2333221 12222222 1 47


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus        82 id~lv~~ag~   91 (259)
T PRK06125         82 IDILVNNAGA   91 (259)
T ss_pred             CCEEEECCCC
Confidence            9999998773

>PLN02253 xanthoxin dehydrogenase

Probab=94.89  E-value=0.17  Score=44.87  Aligned_cols=78  Identities=18%  Similarity=0.201  Sum_probs=48.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC--c-e--ecCCCCCChhHHHHHHHHhc--CCc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV--T-D--FVNTSEHDRPIQEVIAEMTN--GGV  227 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~--~-~--vv~~~~~~~~~~~~i~~~~~--~~~  227 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. .++++.  . .  ..|..+.+ .+.+.+.....  +++
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKFGTL   95 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHhCCC
Confidence            578999986 9999999888888899 88888877665443 333322  1 1  23333322 12222222222  369


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+++++.|.
T Consensus        96 d~li~~Ag~  104 (280)
T PLN02253         96 DIMVNNAGL  104 (280)
T ss_pred             CEEEECCCc
Confidence            999998763

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.87  E-value=0.23  Score=43.45  Aligned_cols=78  Identities=22%  Similarity=0.339  Sum_probs=48.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC---Cce-ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG---VTD-FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g---~~~-vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      +.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ +++.   +.. ..|..+.+ .+...+.+...  +++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAA-SLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            457999987 9999999888888898 788888887775543 3332   111 12333221 12222322221  3689


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=94.86  E-value=0.27  Score=44.16  Aligned_cols=36  Identities=22%  Similarity=0.352  Sum_probs=31.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .+.+++|+|+|++|.+++..+...|+++|+.+.++.
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            467899999999999988888889997798888885

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=94.86  E-value=0.48  Score=42.17  Aligned_cols=131  Identities=19%  Similarity=0.160  Sum_probs=84.9

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC---------ChhHHHHHHHH
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH---------DRPIQEVIAEM  222 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~---------~~~~~~~i~~~  222 (341)
                      +.-.++..+++.|.|..|++++..++.+|+ .|..-+-...+.+..+++|+..+-...+.         +.+|..+-.++
T Consensus       159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~  237 (356)
T COG3288         159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL  237 (356)
T ss_pred             cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence            344567889999999999999999999999 88888778888888888887543211111         12344333333


Q ss_pred             hc---CCccEEEeccC--C---hH-HHHHHHHHhcCCCcEEEEEccCCC-Ccccccc-cceeeecceEEEeee
Q 019414          223 TN---GGVDRSVECTG--N---ID-NMISAFECVHDGWGVAVLVGVPSK-DAVFMTK-PINVLNERTLKGTFF  284 (341)
Q Consensus       223 ~~---~~~d~vld~~g--~---~~-~~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~-~~~~~~~~~~~g~~~  284 (341)
                      ..   .++|+||-+.=  +   |. .........+|+ +.+|.+....+ +....-. .....+++++.|...
T Consensus       238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~n  309 (356)
T COG3288         238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTN  309 (356)
T ss_pred             HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeecC
Confidence            32   27999997532  2   22 245677889997 99999865322 2222211 223457888887653

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.86  E-value=0.12  Score=45.87  Aligned_cols=78  Identities=22%  Similarity=0.285  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH----HHHHHcC-C-ceecCCCCCCh--hHHHHHHHHhcCC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF----EEAKKFG-V-TDFVNTSEHDR--PIQEVIAEMTNGG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~----~~~~~~g-~-~~vv~~~~~~~--~~~~~i~~~~~~~  226 (341)
                      .|+.|||+|+ +++|++.++=...+|+ +++..+.+.+..    +.+++.| + ..++|-++.++  ...+++++.. |.
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~-G~  114 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEV-GD  114 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence            6899999986 8999998777777888 888887776543    3344444 2 24566655431  1333333332 27


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|++++.+|
T Consensus       115 V~ILVNNAG  123 (300)
T KOG1201|consen  115 VDILVNNAG  123 (300)
T ss_pred             ceEEEeccc
Confidence            999999877

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.21  Score=44.17  Aligned_cols=77  Identities=22%  Similarity=0.423  Sum_probs=49.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc---C--Cc-ee--cCCCCCChhHHHHHHHHhc--
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---G--VT-DF--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~---g--~~-~v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      +.++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.. +++   +  .. .+  .|..+.+ .+.+.+.+...  
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~   84 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDED-QVARAVDAATAWH   84 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            578999987 9999999999998999 888888887664432 222   1  11 11  2333322 13333333322  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        85 ~~~d~li~~ag   95 (276)
T PRK05875         85 GRLHGVVHCAG   95 (276)
T ss_pred             CCCCEEEECCC
Confidence            36899999886

>PRK06128 oxidoreductase; Provisional

Probab=94.85  E-value=0.47  Score=42.73  Aligned_cols=78  Identities=18%  Similarity=0.206  Sum_probs=46.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh------HHHHHHcCCce---ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR------FEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~------~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ |++|.+.+..+...|+ +|+.+.++.+.      .+.+++.+...   ..|..+.+ .+.+.+.+... 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEA-FCRQLVERAVKE  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHHHHHH
Confidence            4678999987 9999999988888999 67766544321      22334444322   12333321 12222222221 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|++|++.|
T Consensus       132 ~g~iD~lV~nAg  143 (300)
T PRK06128        132 LGGLDILVNIAG  143 (300)
T ss_pred             hCCCCEEEECCc
Confidence             36999999877

>PRK12367 short chain dehydrogenase; Provisional

Probab=94.84  E-value=0.21  Score=43.65  Aligned_cols=72  Identities=22%  Similarity=0.337  Sum_probs=45.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++ ++.+... .+...  ..|..+.     +.+.+.. +++|++|+
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~-----~~~~~~~-~~iDilVn   85 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGKE-----ESLDKQL-ASLDVLIL   85 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCCH-----HHHHHhc-CCCCEEEE
Confidence            578999987 9999999998888999 888887775 2222211 11111  2233221     1223322 36999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus        86 nAG~   89 (245)
T PRK12367         86 NHGI   89 (245)
T ss_pred             CCcc
Confidence            8874

>PRK07035 short chain dehydrogenase; Provisional

Probab=94.83  E-value=0.21  Score=43.50  Aligned_cols=77  Identities=22%  Similarity=0.254  Sum_probs=48.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.    +.+...   .+|..+.+ ...+.+.+...  ++
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   85 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEME-QIDALFAHIRERHGR   85 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence            467999986 9999999999988999 8999988876654332    223221   12333321 12222322222  36


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|+++++.|
T Consensus        86 id~li~~ag   94 (252)
T PRK07035         86 LDILVNNAA   94 (252)
T ss_pred             CCEEEECCC
Confidence            899998876

>PRK09186 flagellin modification protein A; Provisional

Probab=94.82  E-value=0.2  Score=43.71  Aligned_cols=78  Identities=19%  Similarity=0.418  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc----CCc---e-ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVT---D-FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~----g~~---~-vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      ++.++||+|+ |++|...+..+...|+ +|+.+.+++++.+.+ +++    +..   . ..|..+.+ .+.+.+.+... 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence            4678999987 9999999999988999 788888887765433 222    221   1 22443322 13233333222 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|+++++.+
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence             36899999875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.82  E-value=0.2  Score=43.76  Aligned_cols=79  Identities=20%  Similarity=0.315  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCce---ecCCCCCChhHHHHHHHHh--cCCc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD---FVNTSEHDRPIQEVIAEMT--NGGV  227 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~~~  227 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+.+++..  .+.+++.+...   .+|..+.+ .+.+.+.+..  .+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence            4678999987 9999999998888999 78777665422  23344455322   23443322 1222233221  1369


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999998773

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.82  E-value=0.055  Score=45.92  Aligned_cols=101  Identities=24%  Similarity=0.286  Sum_probs=65.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc----
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN----  224 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~----  224 (341)
                      .....+||-+|++ +|..++.+|+.+. -.+|++++.++++.+.+++    .|...-+.....+  ..+.+.++..    
T Consensus        43 ~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~~~~  119 (205)
T PF01596_consen   43 LTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELANDGEE  119 (205)
T ss_dssp             HHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHTTTT
T ss_pred             hcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhccCC
Confidence            3445689999874 4778888888763 1399999999999877754    5553322222232  4444444432    


Q ss_pred             CCccEEE-eccC--ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRSV-ECTG--NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~vl-d~~g--~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.||.|| |+-=  ....++.++++++++ |.++.=+
T Consensus       120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN  155 (205)
T PF01596_consen  120 GQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN  155 (205)
T ss_dssp             TSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred             CceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence            3699997 6531  234577889999997 8777654

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.80  E-value=0.28  Score=42.90  Aligned_cols=36  Identities=33%  Similarity=0.458  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ...+|+|+|+|++|..+++.+...|..++..++.+.
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            347899999999999999999999998888887643

>PRK05717 oxidoreductase; Validated

Probab=94.80  E-value=0.23  Score=43.38  Aligned_cols=79  Identities=22%  Similarity=0.265  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .|.++||+|+ |.+|..++..+...|+ +|+.++++.++.+. .++++...   ..|..+.+ ...+.+.+...  +++|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEA-QVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence            4678999986 9999999888888898 88888777665443 34444321   23333322 12222333222  3689


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99998773

>PRK06914 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.25  Score=43.77  Aligned_cols=77  Identities=17%  Similarity=0.257  Sum_probs=49.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc---e--ecCCCCCChhHHHHHHHHhc--
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---D--FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~---~--vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      +.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+    .+..   .  ..|..+.+ .+.+ +.+...  
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~-~~~~~~~~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQN-SIHN-FQLVLKEI   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHH-HHHH-HHHHHHhc
Confidence            457899987 9999999988888899 88888888776544322    2221   1  22443322 1332 333322  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            368999998763

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=94.79  E-value=0.14  Score=40.18  Aligned_cols=35  Identities=29%  Similarity=0.414  Sum_probs=29.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ..+|+|.|+|++|...+..+-..|..+++.++.+.
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~   36 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI   36 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence            46899999999999999999899998899887654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08219 short chain dehydrogenase; Provisional

Probab=94.78  E-value=0.32  Score=41.46  Aligned_cols=72  Identities=22%  Similarity=0.289  Sum_probs=45.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c-CCce-ecCCCCCChhHHHHHHHHhcC--CccEEE
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-GVTD-FVNTSEHDRPIQEVIAEMTNG--GVDRSV  231 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~-g~~~-vv~~~~~~~~~~~~i~~~~~~--~~d~vl  231 (341)
                      .++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ . +... ..|..+.     +.+.+...+  ++|.+|
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~~~id~vi   76 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDP-----EAIAAAVEQLGRLDVLV   76 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCH-----HHHHHHHHhcCCCCEEE
Confidence            47899987 99999988777666 6 78999888776554442 2 2211 1223221     223332222  699999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      .+.|.
T Consensus        77 ~~ag~   81 (227)
T PRK08219         77 HNAGV   81 (227)
T ss_pred             ECCCc
Confidence            98874

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.78  E-value=0.28  Score=43.80  Aligned_cols=77  Identities=21%  Similarity=0.248  Sum_probs=55.6

Q ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g~-~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.|.+++|+|.|+ +|...++++...|+ .|+.+.+..+.                     +.+.+     ..+|+++.+
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~---------------------L~~~~-----~~aDIvI~A  209 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN---------------------LPELV-----KQADIIVGA  209 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh---------------------HHHHh-----ccCCEEEEc
Confidence            4788999999976 99999999999999 88877542111                     11111     248999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +|.+..+..  +.++++ ..++.++...
T Consensus       210 tG~~~~v~~--~~lk~g-avViDvg~n~  234 (283)
T PRK14192        210 VGKPELIKK--DWIKQG-AVVVDAGFHP  234 (283)
T ss_pred             cCCCCcCCH--HHcCCC-CEEEEEEEee
Confidence            987664443  458887 8888888643

>PRK06101 short chain dehydrogenase; Provisional

Probab=94.77  E-value=0.21  Score=43.27  Aligned_cols=75  Identities=13%  Similarity=0.158  Sum_probs=46.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--c-eecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~-~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+.+.+.  . ...|..+.+ ++.+.+.+. ....|.++.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~-~~~~d~~i~~   78 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTDHP-GTKAALSQL-PFIPELWIFN   78 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHH-HHHHHHHhc-ccCCCEEEEc
Confidence            46899986 9999998888888899 89999999888776655332  1 123443322 233333332 2245666655


Q ss_pred             cC
Q 019414          234 TG  235 (341)
Q Consensus       234 ~g  235 (341)
                      .|
T Consensus        79 ag   80 (240)
T PRK06101         79 AG   80 (240)
T ss_pred             Cc
Confidence            54

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.77  E-value=0.26  Score=43.20  Aligned_cols=76  Identities=26%  Similarity=0.405  Sum_probs=47.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCcee--cCCCCCChhHHHHHHHHhc--CCccE
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF--VNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~v--v~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      ++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+....  .|..+.+ .+.+.+.+...  +++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~-~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKD-DLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHH-HHHHHHHHHHHhcCCCCE
Confidence            5899987 9999999988888899 8888888877654332    2231112  2333321 12222332222  37999


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      +|++.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9998773

>PLN03075 nicotianamine synthase; Provisional

Probab=94.76  E-value=0.24  Score=44.34  Aligned_cols=97  Identities=13%  Similarity=0.109  Sum_probs=66.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcC-----CceecCCCCCChhHHHHHHHHh-cCCcc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMT-NGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g-----~~~vv~~~~~~~~~~~~i~~~~-~~~~d  228 (341)
                      +.++|+-+|+|+.++.++.+++.+ ...+++.++.+++..+.+++.-     ...-+.+...|  ..+.   .. .++||
T Consensus       123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~~---~~~l~~FD  197 (296)
T PLN03075        123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMDV---TESLKEYD  197 (296)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhhc---ccccCCcC
Confidence            778999999999999888888654 3348999999999988877643     22222222222  2211   11 24799


Q ss_pred             EEEecc-------CChHHHHHHHHHhcCCCcEEEEEc
Q 019414          229 RSVECT-------GNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       229 ~vld~~-------g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +||-.+       .-.+.++...+.++|+ |.++.-.
T Consensus       198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             EEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            998543       1234688999999997 8887665

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.76  E-value=0.23  Score=43.44  Aligned_cols=78  Identities=17%  Similarity=0.263  Sum_probs=48.4

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce----ecCCCCCCh--hHHHHHHHHhcCC
Q 019414          156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD----FVNTSEHDR--PIQEVIAEMTNGG  226 (341)
Q Consensus       156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~----vv~~~~~~~--~~~~~i~~~~~~~  226 (341)
                      .+.++||+|+   +++|.+.++-+...|+ +|+.+.++++..+.++++....    .+|..+.+.  .+.+.+.+.. +.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV-GK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence            4678999986   3899999888888999 7888877754444444442211    234433220  1222232222 46


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|+++++.|
T Consensus        84 iD~lv~nAg   92 (252)
T PRK06079         84 IDGIVHAIA   92 (252)
T ss_pred             CCEEEEccc
Confidence            999999876

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.74  E-value=0.24  Score=43.95  Aligned_cols=93  Identities=22%  Similarity=0.199  Sum_probs=57.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC---ceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~---~~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      ..+.+++|+|+|++|.+++..+...|. +|+.+.++.++.+. ++++..   ...+.       ..+    ......|+|
T Consensus       115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~~----~~~~~~Div  182 (270)
T TIGR00507       115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MDE----LPLHRVDLI  182 (270)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hhh----hcccCccEE
Confidence            457789999999999999888888898 88888888777544 333321   11111       111    111358999


Q ss_pred             EeccCChH--HH---HHHHHHhcCCCcEEEEEccC
Q 019414          231 VECTGNID--NM---ISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       231 ld~~g~~~--~~---~~~~~~l~~~~g~~v~~g~~  260 (341)
                      |+|++...  ..   ......+.++ ..++.+...
T Consensus       183 Inatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y~  216 (270)
T TIGR00507       183 INATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVYN  216 (270)
T ss_pred             EECCCCCCCCCCCCCCCCHHHcCCC-CEEEEeccC
Confidence            99987521  11   1113445665 666666543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.74  E-value=0.31  Score=41.91  Aligned_cols=97  Identities=25%  Similarity=0.309  Sum_probs=62.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      -+|-+||=+|+|+ |+++..+|+ .|+ .|++++.+++..+.++.-....  -+++...   ..+.+... ++.||+|+.
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~---~~edl~~~-~~~FDvV~c  130 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQA---TVEDLASA-GGQFDVVTC  130 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchhh---hHHHHHhc-CCCccEEEE
Confidence            4788899999754 566666665 457 9999999999999887432221  2445432   22222221 148999974


Q ss_pred             -----ccCChH-HHHHHHHHhcCCCcEEEEEcc
Q 019414          233 -----CTGNID-NMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       233 -----~~g~~~-~~~~~~~~l~~~~g~~v~~g~  259 (341)
                           -+..++ .+..+.+.++|+ |.+.+.-.
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~STi  162 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPG-GILFLSTI  162 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCC-cEEEEecc
Confidence                 233333 466789999997 88776643

>PRK08251 short chain dehydrogenase; Provisional

Probab=94.71  E-value=0.23  Score=43.06  Aligned_cols=77  Identities=27%  Similarity=0.459  Sum_probs=48.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----c--CCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~--g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      +.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .  +...   ..|..+.+ .+.+.+.+...  
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHD-QVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            457999987 9999998888878898 88888888877654322    1  2211   23444322 23333333222  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            36999999876

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.70  E-value=0.22  Score=43.74  Aligned_cols=100  Identities=22%  Similarity=0.211  Sum_probs=65.4

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcCCc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      .....+.++++||=+|+|. |..+..+++..+..+|++++.+++..+.+++.-.. .++.   .+  .. .+  ...+.+
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~---~d--~~-~~--~~~~~f   94 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE---AD--IA-SW--QPPQAL   94 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE---Cc--hh-cc--CCCCCc
Confidence            3445677889999998753 66677888776444999999999988887764321 1111   11  11 01  112379


Q ss_pred             cEEEeccC-----C-hHHHHHHHHHhcCCCcEEEEEc
Q 019414          228 DRSVECTG-----N-IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       228 d~vld~~g-----~-~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      |+|+-...     . ...+..+.+.|+++ |+++...
T Consensus        95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~  130 (258)
T PRK01683         95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM  130 (258)
T ss_pred             cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence            99874322     1 34688899999998 9988753

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.68  E-value=0.2  Score=43.61  Aligned_cols=77  Identities=25%  Similarity=0.326  Sum_probs=48.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H---cCCc---eecCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVT---DFVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~~---~vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +   .+..   ...|..+.+ .+.+.+.....  ++
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   81 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEE-AINAGIDYAVETFGG   81 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence            568999986 9999999888888899 8888888877654332 2   2322   122333222 12222222211  36


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|++|.+.+
T Consensus        82 ~d~vi~~a~   90 (258)
T PRK12429         82 VDILVNNAG   90 (258)
T ss_pred             CCEEEECCC
Confidence            999999876

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.68  E-value=0.49  Score=41.55  Aligned_cols=96  Identities=23%  Similarity=0.241  Sum_probs=66.9

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHh-cCC
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-NGG  226 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~-~~~  226 (341)
                      .......++++||=+|+|. |..+..+++.. +. +|++++.++...+.+++.+.+.+.    .+  ..    ++. .+.
T Consensus        22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~~----~~~~~~~   89 (255)
T PRK14103         22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--VR----DWKPKPD   89 (255)
T ss_pred             HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--hh----hCCCCCC
Confidence            4455667889999998764 66777777775 45 899999999998888876654322    11  21    112 237


Q ss_pred             ccEEEeccC-----C-hHHHHHHHHHhcCCCcEEEEE
Q 019414          227 VDRSVECTG-----N-IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       227 ~d~vld~~g-----~-~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ||+|+-...     . ...+..+.+.|+|+ |++++.
T Consensus        90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            999985321     2 34678899999998 998875

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.67  E-value=0.3  Score=42.69  Aligned_cols=101  Identities=20%  Similarity=0.235  Sum_probs=65.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHh---
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT---  223 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~---  223 (341)
                      .+.....+||-+|+ .+|..++.+|+.++ -.++++++.++++.+.++    +.|...-+.....+  ..+.+.++.   
T Consensus        75 ~~~~~ak~iLEiGT-~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~~~  151 (247)
T PLN02589         75 LKLINAKNTMEIGV-YTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIEDG  151 (247)
T ss_pred             HHHhCCCEEEEEeC-hhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHhcc
Confidence            34445568888887 35777788888763 138999999998877664    45643322222233  445554443   


Q ss_pred             --cCCccEEE-ecc--CChHHHHHHHHHhcCCCcEEEE
Q 019414          224 --NGGVDRSV-ECT--GNIDNMISAFECVHDGWGVAVL  256 (341)
Q Consensus       224 --~~~~d~vl-d~~--g~~~~~~~~~~~l~~~~g~~v~  256 (341)
                        .+.||.|| |+-  .....++.++++++++ |.++.
T Consensus       152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~  188 (247)
T PLN02589        152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY  188 (247)
T ss_pred             ccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence              24799997 442  1234677889999997 87665

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.67  E-value=0.27  Score=42.95  Aligned_cols=79  Identities=20%  Similarity=0.271  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHH---HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEE---AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~---~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ +++|.+.++-+...|+ +|+.+++++++  .+.   ++..+...   ..|..+.+ ...+.+.+...  
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKA-DLRAAVARTEAEL   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            3568999986 9999999999888999 78888776432  222   23334321   22333322 12222332221  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            368999998874

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.67  E-value=0.23  Score=44.11  Aligned_cols=78  Identities=21%  Similarity=0.305  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+    +..+...   ..|..+.+ .+.+.+.+...  +
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE-EVTHLADEAFRLLG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHHHHHHHcC
Confidence            3568999986 9999999998888999 788888887665432    2234322   23333322 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        83 ~id~li~nAg   92 (275)
T PRK05876         83 HVDVVFSNAG   92 (275)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PRK06197 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.23  Score=44.85  Aligned_cols=78  Identities=15%  Similarity=0.241  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc-----CCce---ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF-----GVTD---FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~~---vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ |++|.++++.+...|+ +|+.+.++.++.+.+ +++     +...   .+|..+.+ ...+.+.+... 
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLA-SVRAAADALRAA   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHH-HHHHHHHHHHhh
Confidence            4678999987 9999999888888898 788888887664432 111     1111   23333322 12222333222 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|++|++.|
T Consensus        93 ~~~iD~li~nAg  104 (306)
T PRK06197         93 YPRIDLLINNAG  104 (306)
T ss_pred             CCCCCEEEECCc
Confidence             36999999886

>PRK07577 short chain dehydrogenase; Provisional

Probab=94.65  E-value=0.17  Score=43.43  Aligned_cols=73  Identities=23%  Similarity=0.263  Sum_probs=47.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  233 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~  233 (341)
                      +.++||+|+ |.+|...++.+...|+ +|+.+.++.++.     .... ...|..+.+ .+.+.+.+.... +.|++|.+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLADIE-QTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCCHH-HHHHHHHHHHHhCCCcEEEEC
Confidence            567999987 9999999998888998 888888876541     1111 122333322 133333333333 68999998


Q ss_pred             cCC
Q 019414          234 TGN  236 (341)
Q Consensus       234 ~g~  236 (341)
                      .|.
T Consensus        76 ag~   78 (234)
T PRK07577         76 VGI   78 (234)
T ss_pred             CCC
Confidence            774

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.65  E-value=0.25  Score=43.85  Aligned_cols=78  Identities=21%  Similarity=0.331  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      ++.+++|+|+ |++|++.+..+...|+ +|+.+++++++.+.+ +   +.+...   ..|..+.+ .+...+.+...  +
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKE-SLEQARQQILEDFG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999998888999 888888877654432 2   223321   23333321 12222222222  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999877

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=94.64  E-value=0.31  Score=42.64  Aligned_cols=77  Identities=18%  Similarity=0.239  Sum_probs=47.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H----cCCc--ee--cCCCCCChhHHHHHHHHhc--
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K----FGVT--DF--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~----~g~~--~v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      +.++||+|+ |.+|.+.+..+...|+ +|+.++++.++.+.+. +    .+..  ..  .|..+.+ .....+.+...  
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQ-SVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHH-HHHHHHHHHHHHc
Confidence            457999987 9999999988888899 8888888876554332 1    2211  11  2333221 12222222221  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|+++++.|
T Consensus        80 ~~id~vv~~ag   90 (259)
T PRK12384         80 GRVDLLVYNAG   90 (259)
T ss_pred             CCCCEEEECCC
Confidence            37899999886

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=94.62  E-value=0.3  Score=42.66  Aligned_cols=79  Identities=22%  Similarity=0.331  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ .+...+.+...  +
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEE-AVAAAFARIDAEHG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence            4778999987 9999999888888899 889998887664432    2334211   22333321 12222332222  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|.++.+.|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999998774

>PRK09242 tropinone reductase; Provisional

Probab=94.62  E-value=0.24  Score=43.31  Aligned_cols=79  Identities=19%  Similarity=0.250  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----c--CCce---ecCCCCCChhHHHHHHHHh--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTD---FVNTSEHDRPIQEVIAEMT--  223 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~--g~~~---vv~~~~~~~~~~~~i~~~~--  223 (341)
                      .+.++||+|+ |++|...++.+...|+ +|+.+.++.++.+.+.+    .  +...   ..|..+.+ ...+.+.+..  
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDE-DRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH-HHHHHHHHHHHH
Confidence            3678999987 9999999999988999 88888888776544322    1  2211   23433322 1222222221  


Q ss_pred             cCCccEEEeccCC
Q 019414          224 NGGVDRSVECTGN  236 (341)
Q Consensus       224 ~~~~d~vld~~g~  236 (341)
                      -+++|+++.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence            1379999999874

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.62  E-value=0.43  Score=41.24  Aligned_cols=34  Identities=35%  Similarity=0.416  Sum_probs=29.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      ..+|+|+|+|++|...+..+-..|..+++.++.+
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4689999999999999999999999888888654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.61  E-value=0.2  Score=46.77  Aligned_cols=35  Identities=29%  Similarity=0.284  Sum_probs=31.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      .+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56789999999999999999999999899999887

>PRK08328 hypothetical protein; Provisional

Probab=94.60  E-value=0.3  Score=42.34  Aligned_cols=34  Identities=35%  Similarity=0.488  Sum_probs=30.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      +.+|+|+|+|++|..++..+-..|.++++.++.+
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4679999999999999999999999888888754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.60  E-value=0.29  Score=42.30  Aligned_cols=79  Identities=23%  Similarity=0.269  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-e--cCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      ++.++||+|+ |.+|...+..+...|+ .|+...++.++.+.+ .+++... +  .|..+.+ .+.+.+.+...  +++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRD-EVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence            3568999987 9999999888888898 788887777665543 3343321 1  2332221 12222222211  3699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      .+|++.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99998873

>PRK07102 short chain dehydrogenase; Provisional

Probab=94.59  E-value=0.34  Score=41.96  Aligned_cols=38  Identities=26%  Similarity=0.386  Sum_probs=32.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE  196 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~  196 (341)
                      .+++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~   40 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER   40 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence            46899986 9999999998888898 89999888876543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.58  E-value=0.25  Score=40.71  Aligned_cols=33  Identities=24%  Similarity=0.240  Sum_probs=29.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      +|+|+|+|++|...++.+-..|..+++.++.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999988889998899988765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.57  E-value=0.33  Score=46.19  Aligned_cols=104  Identities=13%  Similarity=0.227  Sum_probs=63.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce-e--cCCCCCChhHHHHHHHH
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-v--v~~~~~~~~~~~~i~~~  222 (341)
                      ....+++|++||=+|+|+ |-.++.+++..+..+|++++.++++.+.++    .+|.+. +  .+.+..+  .. ..  .
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~--~~-~~--~  305 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRG--PS-QW--A  305 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccc--cc-cc--c
Confidence            445788999999887643 334445555444339999999999977654    456642 2  2211111  00 00  0


Q ss_pred             hcCCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          223 TNGGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       223 ~~~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ..+.||.|| |  |+|.                         .+.+..+++.++|+ |+++.....
T Consensus       306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs  370 (426)
T TIGR00563       306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCS  370 (426)
T ss_pred             cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence            123699987 5  4442                         13677789999998 999877543

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PRK06398 aldose dehydrogenase; Validated

Probab=94.56  E-value=0.15  Score=44.81  Aligned_cols=73  Identities=21%  Similarity=0.296  Sum_probs=46.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      .|.++||+|+ +++|.+.+..+...|+ +|+.+++++++..     ... ...|..+.+ .+.+.+.+...  +++|++|
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            3678999987 9999999999989999 8888877765432     111 123443322 13333333222  3699999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      ++.|
T Consensus        78 ~~Ag   81 (258)
T PRK06398         78 NNAG   81 (258)
T ss_pred             ECCC
Confidence            9876

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.54  E-value=1.6  Score=37.42  Aligned_cols=115  Identities=10%  Similarity=0.036  Sum_probs=64.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .+.+|||+|+|.++.-=+..+...|+ .|.+++..-. ....+.+.|.-..+ ..+.+    ..-  +  .++++||-|+
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~----~~d--l--~g~~LViaAT   93 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYD----KEF--I--KDKHLIVIAT   93 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCC----hHH--h--CCCcEEEECC
Confidence            46689999999999887888888898 7777754321 22222222321122 11111    110  1  3689999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeee-cceEEEe
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLN-ERTLKGT  282 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~  282 (341)
                      +.++.-+++....... +.++..........+.++ ..+.+ .+++.-+
T Consensus        94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~P-Aiv~rg~l~IaIS  140 (223)
T PRK05562         94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCIIP-YQRSTKNFVFALN  140 (223)
T ss_pred             CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEee-eEEecCCEEEEEE
Confidence            8866666666666664 666665543333333332 22333 4555433

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.53  E-value=1.2  Score=33.72  Aligned_cols=88  Identities=23%  Similarity=0.342  Sum_probs=60.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~--g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|.|..|.....-++..  +...+.++++++++.+. .+++|.. .+  .+    +.+.+..   ..+|+|+.++.
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~~----~~~ll~~---~~~D~V~I~tp   71 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--TD----LEELLAD---EDVDAVIIATP   71 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--SS----HHHHHHH---TTESEEEEESS
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--hH----HHHHHHh---hcCCEEEEecC
Confidence            588999999998887666655  45344466667766665 5667776 32  22    3333222   26999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          236 NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .....+.+..++..  |+-+++.
T Consensus        72 ~~~h~~~~~~~l~~--g~~v~~E   92 (120)
T PF01408_consen   72 PSSHAEIAKKALEA--GKHVLVE   92 (120)
T ss_dssp             GGGHHHHHHHHHHT--TSEEEEE
T ss_pred             CcchHHHHHHHHHc--CCEEEEE
Confidence            87888888888887  5566665

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.53  E-value=0.28  Score=43.16  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=46.6

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce--ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~--vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|..+||+|+ +  ++|.+.++.+...|+ +|+.+.++++..+.+    ++.|...  .+|..+.+ ...+.+.+...  
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence            4577899987 4  799999888888899 777777764322222    2334322  23444432 12222333222  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|+++++.|
T Consensus        85 g~iDilVnnag   95 (260)
T PRK06603         85 GSFDFLLHGMA   95 (260)
T ss_pred             CCccEEEEccc
Confidence            36999998776

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.52  E-value=0.28  Score=42.35  Aligned_cols=78  Identities=19%  Similarity=0.356  Sum_probs=48.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +.+++|+|+ |++|...+..+...|+ .|+.++++.++.+..    +..+...   ..|..+.+ .+.+.+++...  ++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   84 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYE-EVTAAIEQLKNELGS   84 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            567999987 9999999988888999 888888887664432    2223221   12332221 13333333222  37


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|.+|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998764

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.52  E-value=0.35  Score=39.01  Aligned_cols=77  Identities=27%  Similarity=0.330  Sum_probs=47.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC--hhhHH-H---HHHcCCce-e--cCCCCCChhHHHHHHHHh--cCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS--SKRFE-E---AKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~--~~~~~-~---~~~~g~~~-v--v~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      ++||+|+ +++|...++.+...|..+|+.+.++  .++.+ +   ++..+... +  .|..+.+ .+...+.+..  .+.
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPE-SIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHH-HHHHHHHHHHHHHSS
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccc-ccccccccccccccc
Confidence            6899987 9999998888877777688888888  34333 2   23345322 1  2222221 1333333332  237


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999998874

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=94.51  E-value=0.83  Score=39.96  Aligned_cols=99  Identities=14%  Similarity=0.226  Sum_probs=63.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      ....++.+||-+|+|. |..+..+++ .|. .|++++.+++..+.+++.... ..+..+     +.. + ...++.||+|
T Consensus        38 l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d-----~~~-~-~~~~~~fD~V  107 (251)
T PRK10258         38 LPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGD-----IES-L-PLATATFDLA  107 (251)
T ss_pred             cCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcC-----ccc-C-cCCCCcEEEE
Confidence            3445678899998764 555555554 466 999999999999888875432 111111     100 0 1122369999


Q ss_pred             EeccC------ChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          231 VECTG------NIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       231 ld~~g------~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +....      -...+.++.+.|+|+ |.++......
T Consensus       108 ~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~~  143 (251)
T PRK10258        108 WSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLVQ  143 (251)
T ss_pred             EECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCCC
Confidence            85321      124688899999998 9998875443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.51  E-value=0.12  Score=47.68  Aligned_cols=74  Identities=14%  Similarity=0.112  Sum_probs=46.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcC----Cc-eecCCCCCChhHHHHHHHHhcC-Cc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFG----VT-DFVNTSEHDRPIQEVIAEMTNG-GV  227 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g----~~-~vv~~~~~~~~~~~~i~~~~~~-~~  227 (341)
                      +|.+|||+|+ |.+|...++.+...|. +|++++++...... .+.++    .. ...|..+.     +.+.+...+ ++
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-----~~~~~~~~~~~~   76 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA-----AKLRKAIAEFKP   76 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH-----HHHHHHHhhcCC
Confidence            3678999986 9999999999999998 78888776654322 12222    11 11222221     223333333 68


Q ss_pred             cEEEeccC
Q 019414          228 DRSVECTG  235 (341)
Q Consensus       228 d~vld~~g  235 (341)
                      |+||++.+
T Consensus        77 d~vih~A~   84 (349)
T TIGR02622        77 EIVFHLAA   84 (349)
T ss_pred             CEEEECCc
Confidence            99999887

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR00417 speE spermidine synthase

Probab=94.49  E-value=0.35  Score=42.98  Aligned_cols=97  Identities=22%  Similarity=0.191  Sum_probs=59.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eec-----CCCCCChhHHHHHHHHhcCCccE
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFV-----NTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~vv-----~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      ..+||++|+|. |..+..+++.....++++++.+++-.+.+++.-..  ..+     +....+  ..+.+++ ..+.+|+
T Consensus        73 p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D--~~~~l~~-~~~~yDv  148 (270)
T TIGR00417        73 PKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDD--GFKFLAD-TENTFDV  148 (270)
T ss_pred             CCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECc--hHHHHHh-CCCCccE
Confidence            45999998754 44555666666566899999998887777763110  000     000111  2233332 2458999


Q ss_pred             EE-ecc---C------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          230 SV-ECT---G------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       230 vl-d~~---g------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      |+ |..   +      ..+.++.+.+.|+++ |.++...
T Consensus       149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            87 432   1      124567888999998 9998763

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.47  E-value=0.36  Score=46.66  Aligned_cols=69  Identities=29%  Similarity=0.316  Sum_probs=47.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-----hHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-----RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-----~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      .+.+|+|+|+|.+|+.++..++..|+ .|++++.++.     ..+.+++.|+.........           ....+|.|
T Consensus        15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----------~~~~~D~V   82 (480)
T PRK01438         15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----------LPEDTDLV   82 (480)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----------ccCCCCEE
Confidence            46789999999999999999999999 7888875542     2344666777544322110           01257888


Q ss_pred             EeccCC
Q 019414          231 VECTGN  236 (341)
Q Consensus       231 ld~~g~  236 (341)
                      +-+.|-
T Consensus        83 v~s~Gi   88 (480)
T PRK01438         83 VTSPGW   88 (480)
T ss_pred             EECCCc
Confidence            877764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.47  E-value=0.33  Score=42.08  Aligned_cols=78  Identities=22%  Similarity=0.309  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc-ee--cCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT-DF--VNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~v--v~~~~~~~~~~~~i~~~~~--~  225 (341)
                      ++.++||+|+ |.+|...+..+...|+ .|+.++++.++.+.+.    +.+.. .+  .|..+.+ .+.+.+.+...  +
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRD-SVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            3678999987 9999999998888999 8888888876654332    22321 12  2322221 12222332221  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|.+.|
T Consensus        80 ~~d~vi~~ag   89 (250)
T TIGR03206        80 PVDVLVNNAG   89 (250)
T ss_pred             CCCEEEECCC
Confidence            6899999886

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.47  E-value=0.29  Score=43.32  Aligned_cols=78  Identities=17%  Similarity=0.268  Sum_probs=49.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc-ee--cCCCCCChhHHHHHHHHhc--CCccE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DF--VNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~v--v~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      +.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++.. ..  .|..+.+ .+.+.+.....  +++|+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRA-AVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            357899987 9999999888888898 88888888877665444 2221 11  2332221 12222222211  37899


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      ++.+.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999874

>PRK07340 ornithine cyclodeaminase; Validated

Probab=94.46  E-value=0.22  Score=45.13  Aligned_cols=93  Identities=17%  Similarity=0.105  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHH-HHHcC---CceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEE-AKKFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~-~~g~~~vv~v~~~~~~~~~-~~~~g---~~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      ....+++|+|+|..|.+.++.+. ..+.++|.+..++.++.+. ++++.   ....  .  .+  ..+.+     ...|+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~--~~--~~~av-----~~aDi  191 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--P--LD--GEAIP-----EAVDL  191 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--E--CC--HHHHh-----hcCCE
Confidence            45578999999999999888776 4687899999999888654 44443   2211  1  11  33333     25899


Q ss_pred             EEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      |+.|+.+++.+-..|  ++|+ -++..+|...
T Consensus       192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~  220 (304)
T PRK07340        192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFT  220 (304)
T ss_pred             EEEccCCCCceeCcc--CCCC-CEEEecCCCC
Confidence            999988765443333  6886 8888888654

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.46  E-value=0.29  Score=48.33  Aligned_cols=75  Identities=17%  Similarity=0.242  Sum_probs=55.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      ++++|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++- +..+   .+.+++..-+.+|.++-+++++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~a~i~~a~~viv~~~~~  492 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQLAHLDCARWLLLTIPNG  492 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHhcCccccCEEEEEcCCh
Confidence            689999999999999999999998 8999999999999999988765442 2222   1223332223688887776653

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=94.43  E-value=0.34  Score=42.29  Aligned_cols=79  Identities=24%  Similarity=0.367  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---HcCCce-e--cCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ .   ..+... .  .|..+.+ .+.+.+.....  +
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQ-EVEAAIEHIEKDIG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHH-HHHHHHHHHHHhcC
Confidence            3568999987 9999999988888898 888888887664432 2   223221 1  2333322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            69999998873

>PLN02244 tocopherol O-methyltransferase

Probab=94.42  E-value=0.23  Score=45.78  Aligned_cols=98  Identities=20%  Similarity=0.233  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      +++++||=+|+|. |..+..+++..|+ .|++++.++...+.+++.    +...-+.....+  ..+  ....++.||+|
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~--~~~~~~~FD~V  190 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALN--QPFEDGQFDLV  190 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--ccc--CCCCCCCccEE
Confidence            6889999898753 5567788887788 999999999877766542    331101111111  100  01123479999


Q ss_pred             EeccC-----C-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          231 VECTG-----N-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       231 ld~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +-...     . ...++++.+.|+|+ |++++...
T Consensus       191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            75322     1 24678899999998 99988754

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=94.40  E-value=0.34  Score=43.21  Aligned_cols=79  Identities=27%  Similarity=0.360  Sum_probs=58.4

Q ss_pred             CCCCEEEEECC-CHHHHH-HHHHHHHcCCCEEEEEcCChhhHHHHH-----HcCCc---eecCCCCCChhHHHHHHHHhc
Q 019414          155 ERGSSVAVFGL-GAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVT---DFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~-a~~la~~~g~~~vv~v~~~~~~~~~~~-----~~g~~---~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      +-|++.+|.|+ .++|.+ +-++|| .|. .|+-+.|+++|++.++     +.++.   .++|+.+.+. .-+.+++...
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~  123 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA  123 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence            34678888997 799977 566666 999 7999999999987654     34542   3578877764 4566666666


Q ss_pred             C-CccEEEeccCC
Q 019414          225 G-GVDRSVECTGN  236 (341)
Q Consensus       225 ~-~~d~vld~~g~  236 (341)
                      + .+-+.++++|-
T Consensus       124 ~~~VgILVNNvG~  136 (312)
T KOG1014|consen  124 GLDVGILVNNVGM  136 (312)
T ss_pred             CCceEEEEecccc
Confidence            6 78888999884

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.40  E-value=0.3  Score=37.79  Aligned_cols=92  Identities=24%  Similarity=0.339  Sum_probs=51.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHH-cCCCEEEEEcCChh---hHHHHHHcCCc--eecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          159 SVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSK---RFEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~-~g~~~vv~v~~~~~---~~~~~~~~g~~--~vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      +|+|+|+ |-+|.+.++.+.. .+.+-+-+++++++   ..+.-.-.|..  .+..+        ..+.+.... .|+++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~--------~~l~~~~~~-~DVvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT--------DDLEELLEE-ADVVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB--------S-HHHHTTH--SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc--------hhHHHhccc-CCEEE
Confidence            5889998 9999999999987 57755556655551   11111112211  11101        112223222 89999


Q ss_pred             eccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          232 ECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       232 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      |++ .++.....++.+... |.-+.+|...
T Consensus        73 DfT-~p~~~~~~~~~~~~~-g~~~ViGTTG  100 (124)
T PF01113_consen   73 DFT-NPDAVYDNLEYALKH-GVPLVIGTTG  100 (124)
T ss_dssp             EES--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred             EcC-ChHHhHHHHHHHHhC-CCCEEEECCC
Confidence            998 556665555555555 7777776644

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=94.39  E-value=0.22  Score=41.53  Aligned_cols=101  Identities=18%  Similarity=0.182  Sum_probs=63.4

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      +....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++    .+...+- ....+  ...    ...
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~-~~~~d--~~~----~~~   95 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNID-IIPGE--API----ELP   95 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeE-EEecC--chh----hcC
Confidence            3455677889998888754 6666677776543499999999988776654    3332211 11111  111    112


Q ss_pred             CCccEEEeccC---ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~vld~~g---~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.+|+|+....   -...++.+.+.|+++ |+++...
T Consensus        96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~  131 (187)
T PRK08287         96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF  131 (187)
T ss_pred             cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence            36999985321   124677889999998 9987753

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.38  E-value=0.028  Score=45.08  Aligned_cols=94  Identities=21%  Similarity=0.204  Sum_probs=55.3

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC----ChhHHHHHHHHhcCCccEEEeccC
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~----~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      |+|+|+|++|...+..++..|. .|..+.+++ +.+.+++.|........+.    .......  ....+.+|++|-|+=
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6899999999998888877898 888888888 7777777665322111000    0000000  112247999999985


Q ss_pred             ChH---HHHHHHHHhcCCCcEEEEEc
Q 019414          236 NID---NMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~~---~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +..   .++.+...+.++ ..++.+.
T Consensus        77 a~~~~~~l~~l~~~~~~~-t~iv~~q  101 (151)
T PF02558_consen   77 AYQLEQALQSLKPYLDPN-TTIVSLQ  101 (151)
T ss_dssp             GGGHHHHHHHHCTGEETT-EEEEEES
T ss_pred             ccchHHHHHHHhhccCCC-cEEEEEe
Confidence            422   333344444454 5666554

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PLN03139 formate dehydrogenase; Provisional

Probab=94.37  E-value=0.25  Score=46.12  Aligned_cols=46  Identities=22%  Similarity=0.274  Sum_probs=37.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  202 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~  202 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~  243 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA  243 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence            57799999999999999999999999 88888877544444455554

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=94.37  E-value=0.3  Score=42.33  Aligned_cols=78  Identities=23%  Similarity=0.268  Sum_probs=47.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce-e--cCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +.++||+|+ |.+|...+..+...|+ .|++++++.++...    ++..+... +  .|..+.+ .+.+.+.+...  ++
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   83 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRA-ALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence            568999987 9999999888888898 88889888655432    23333221 1  2333221 12222222221  26


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++.+.|.
T Consensus        84 ~d~vi~~ag~   93 (251)
T PRK12826         84 LDILVANAGI   93 (251)
T ss_pred             CCEEEECCCC
Confidence            8999998754

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.34  E-value=0.68  Score=40.68  Aligned_cols=97  Identities=25%  Similarity=0.243  Sum_probs=61.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      .++.+||=+|+|. |..+..+++. |. .|++++.+++..+.+++.    |...-+.....+  .. .+....++.||+|
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d--~~-~l~~~~~~~fD~V  116 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA--AQ-DIAQHLETPVDLI  116 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC--HH-HHhhhcCCCCCEE
Confidence            4567888888754 6677777775 76 999999999988877653    321101111111  21 1222234479999


Q ss_pred             Eecc-----CC-hHHHHHHHHHhcCCCcEEEEEc
Q 019414          231 VECT-----GN-IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       231 ld~~-----g~-~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +-..     .. ...++.+.+.|+|+ |+++.+-
T Consensus       117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  149 (255)
T PRK11036        117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF  149 (255)
T ss_pred             EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            8421     12 24688999999998 9997764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.34  E-value=0.31  Score=42.65  Aligned_cols=79  Identities=25%  Similarity=0.255  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH---HHHHcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~---~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+.++++..+   .+.+.+...   .+|..+.+ .....+.+...  ++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPE-SAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence            4678999987 9999999999888999 7877777632222   223334321   23333322 12222222221  36


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998773

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.33  E-value=0.55  Score=39.96  Aligned_cols=115  Identities=16%  Similarity=0.086  Sum_probs=69.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .|.+|||+|+|.+|.-=+.+....|+ .|+++..+. +....+.+ .+.. .+. ..    +....  +  .++++||-+
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~-~~~-~~----~~~~~--~--~~~~lviaA   79 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIK-WIE-RE----FDAED--L--DDAFLVIAA   79 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcc-hhh-cc----cChhh--h--cCceEEEEe
Confidence            45689999999999998999999999 777775544 33322222 2211 111 11    11110  1  148899999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEe
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT  282 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~  282 (341)
                      ++.++.-+...+...+. +.++..-+......+.++...-...+.+.-+
T Consensus        80 t~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIs  127 (210)
T COG1648          80 TDDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQIAIS  127 (210)
T ss_pred             CCCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEEEEE
Confidence            98877777777788876 8888777655433344333222334444433

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.31  E-value=0.52  Score=41.67  Aligned_cols=106  Identities=17%  Similarity=0.175  Sum_probs=67.5

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcCC
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      +....++.++.+||=+|+|. |..+..+++..+. +|++++.+++..+.+++.... ..+.....+  +.+  ....++.
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~  117 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT  117 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence            35567889999999998753 5556677777777 999999999888887764221 111111111  110  0112236


Q ss_pred             ccEEEe--cc---C---ChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          227 VDRSVE--CT---G---NIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       227 ~d~vld--~~---g---~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ||+|+-  +.   +   -...++++.+.|+|+ |++++....
T Consensus       118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~  158 (263)
T PTZ00098        118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC  158 (263)
T ss_pred             eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            999885  21   1   124678889999998 999987643

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.30  E-value=0.33  Score=43.61  Aligned_cols=70  Identities=16%  Similarity=0.141  Sum_probs=49.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+...   .  +  ..+.+     ...|+||.|+....
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~~~~-----~~aDivi~~vp~~~   67 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA---E--T--ARQVT-----EQADVIFTMVPDSP   67 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc---C--C--HHHHH-----hcCCEEEEecCCHH
Confidence            37789999999988888888898 89999999999888887776321   1  1  22222     13678888776543


Q ss_pred             HHH
Q 019414          239 NMI  241 (341)
Q Consensus       239 ~~~  241 (341)
                      .+.
T Consensus        68 ~~~   70 (291)
T TIGR01505        68 QVE   70 (291)
T ss_pred             HHH
Confidence            333

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.29  E-value=0.36  Score=42.94  Aligned_cols=78  Identities=17%  Similarity=0.244  Sum_probs=48.5

Q ss_pred             CCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHH-HHHcCCce--ecCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEE-AKKFGVTD--FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~~---~~~~-~~~~g~~~--vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+   +++|++.++.+...|+ +|+.+.++++   +.+. .++++...  ..|..+.+ ...+.+.+...  +
T Consensus         5 ~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~i~~~~g   82 (274)
T PRK08415          5 GKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE-HFKSLAESLKKDLG   82 (274)
T ss_pred             CcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH-HHHHHHHHHHHHcC
Confidence            678999986   4899999988888999 7888877743   2222 23445322  23444332 13233333222  4


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        83 ~iDilVnnAG~   93 (274)
T PRK08415         83 KIDFIVHSVAF   93 (274)
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.28  E-value=0.4  Score=45.03  Aligned_cols=81  Identities=21%  Similarity=0.346  Sum_probs=49.6

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-------HHHHc-CCcee-cCCCCCChhHHHHHHHH
Q 019414          153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-------EAKKF-GVTDF-VNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-------~~~~~-g~~~v-v~~~~~~~~~~~~i~~~  222 (341)
                      ....+.+|||+|+ |.+|...+..+...|+ .|+++.++..+.+       ..+.. ++..+ .|..+.+ .+.+.+...
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~-~l~~~~~~~  133 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDAD-SLRKVLFSE  133 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHH-HHHHHHHHh
Confidence            3456778999987 9999999998888898 8888888765421       11112 23222 2333322 122222221


Q ss_pred             hcCCccEEEeccCC
Q 019414          223 TNGGVDRSVECTGN  236 (341)
Q Consensus       223 ~~~~~d~vld~~g~  236 (341)
                       ..++|+||+|.+.
T Consensus       134 -~~~~D~Vi~~aa~  146 (390)
T PLN02657        134 -GDPVDVVVSCLAS  146 (390)
T ss_pred             -CCCCcEEEECCcc
Confidence             1169999998764

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.25  E-value=0.49  Score=39.96  Aligned_cols=34  Identities=35%  Similarity=0.476  Sum_probs=30.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      ..+|+|.|+|++|...++.+.+.|...++.++.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            4679999999999999999999999889999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.22  E-value=0.37  Score=42.42  Aligned_cols=79  Identities=22%  Similarity=0.320  Sum_probs=46.9

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce--ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      ++.++||+|+   +++|.+.++.+...|+ +|+.+.++++..+.+++    .+...  ..|..+.+ +..+.+.+...  
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDD-EINQVFADLGKHW   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHH-HHHHHHHHHHHHh
Confidence            4678999983   5899999888888999 77777655433333333    23222  23443322 12222322222  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++++.|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            379999998763

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=94.20  E-value=0.34  Score=42.15  Aligned_cols=77  Identities=30%  Similarity=0.365  Sum_probs=48.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce---ecCCCCCChhHHHHHHHHh--cCCc
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMT--NGGV  227 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~i~~~~--~~~~  227 (341)
                      .++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+    .+...   ..|..+.+ .+...+.+..  .+++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKED-EIADMIAAAAAEFGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHhcCCC
Confidence            47899987 9999999988888899 89999888876654433    22211   12333321 1322222222  1368


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |++|.+.+.
T Consensus        80 d~vi~~a~~   88 (255)
T TIGR01963        80 DILVNNAGI   88 (255)
T ss_pred             CEEEECCCC
Confidence            999987753

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.18  E-value=0.4  Score=43.11  Aligned_cols=70  Identities=21%  Similarity=0.254  Sum_probs=48.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+...   .  +  +.+.+     ...|+||.|+....
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~---~--~--~~e~~-----~~~d~vi~~vp~~~   70 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA---S--T--AKAVA-----EQCDVIITMLPNSP   70 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---C--C--HHHHH-----hcCCEEEEeCCCHH
Confidence            58899999999988887778888 88899999988887777765321   1  1  22222     13678887776544


Q ss_pred             HHH
Q 019414          239 NMI  241 (341)
Q Consensus       239 ~~~  241 (341)
                      ...
T Consensus        71 ~~~   73 (296)
T PRK11559         71 HVK   73 (296)
T ss_pred             HHH
Confidence            333

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=94.17  E-value=0.75  Score=40.63  Aligned_cols=104  Identities=15%  Similarity=0.239  Sum_probs=66.4

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcC-------Cce--ecCCCCCChhHHHHH
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFG-------VTD--FVNTSEHDRPIQEVI  219 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g-------~~~--vv~~~~~~~~~~~~i  219 (341)
                      +...++++++||-+|+|. |..+..+++..+. ..|++++.+++..+.+++..       .+.  ++..+..+      +
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~------l  139 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD------L  139 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc------C
Confidence            345678899999998753 4566777777652 38999999999888876421       111  11111100      0


Q ss_pred             HHHhcCCccEEEeccC-----C-hHHHHHHHHHhcCCCcEEEEEccCCC
Q 019414          220 AEMTNGGVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVGVPSK  262 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~~~~  262 (341)
                       ...++.||.|+-..+     . ...++++.+.|+|+ |+++.......
T Consensus       140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~~  186 (261)
T PLN02233        140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNKS  186 (261)
T ss_pred             -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCCC
Confidence             111236898874322     1 34688999999998 99988876543

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=94.14  E-value=0.57  Score=37.85  Aligned_cols=84  Identities=17%  Similarity=0.148  Sum_probs=54.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC------CC-CCChhHHHHHHHHhcCCccEEE
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN------TS-EHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~------~~-~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      +|.|+|+|..|.+++..+...|. .|....++++..+.+++-+.....-      .. .-..++.+.+     .+.|+++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII   74 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence            47899999999999999999997 9999999998888777643311100      00 0001144333     3479999


Q ss_pred             eccCChHHHHHHHHHhcC
Q 019414          232 ECTGNIDNMISAFECVHD  249 (341)
Q Consensus       232 d~~g~~~~~~~~~~~l~~  249 (341)
                      -++.+ ..++..++.+.+
T Consensus        75 iavPs-~~~~~~~~~l~~   91 (157)
T PF01210_consen   75 IAVPS-QAHREVLEQLAP   91 (157)
T ss_dssp             E-S-G-GGHHHHHHHHTT
T ss_pred             ecccH-HHHHHHHHHHhh
Confidence            98876 556666666665

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=94.13  E-value=0.94  Score=36.62  Aligned_cols=87  Identities=24%  Similarity=0.339  Sum_probs=52.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      ++.+|.|+|-|..|++.++-+|-.|...+++.....+..+.+++-|....      +  ..+.++     ..|+|+-.+.
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~------~--~~eAv~-----~aDvV~~L~P   69 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM------S--VAEAVK-----KADVVMLLLP   69 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC------E--HHHHHH-----C-SEEEE-S-
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec------c--HHHHHh-----hCCEEEEeCC
Confidence            46889999999999999999999999444455444447888999887522      1  444443     3789988875


Q ss_pred             Ch---HHH-HHHHHHhcCCCcEEEE
Q 019414          236 NI---DNM-ISAFECVHDGWGVAVL  256 (341)
Q Consensus       236 ~~---~~~-~~~~~~l~~~~g~~v~  256 (341)
                      ..   +.+ ++....|+++ ..+++
T Consensus        70 D~~q~~vy~~~I~p~l~~G-~~L~f   93 (165)
T PF07991_consen   70 DEVQPEVYEEEIAPNLKPG-ATLVF   93 (165)
T ss_dssp             HHHHHHHHHHHHHHHS-TT--EEEE
T ss_pred             hHHHHHHHHHHHHhhCCCC-CEEEe
Confidence            41   122 3444577775 44433

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=94.13  E-value=0.78  Score=38.77  Aligned_cols=98  Identities=20%  Similarity=0.202  Sum_probs=63.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh-cCCccEE
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRS  230 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~-~~~~d~v  230 (341)
                      ++.+||-+|+|. |..+..+++......|++++.+++..+.+++    .+...+ .....+  +.+.+.... ++.+|.|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v-~~~~~d--~~~~l~~~~~~~~~D~V  115 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNL-RLLCGD--AVEVLLDMFPDGSLDRI  115 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCE-EEEecC--HHHHHHHHcCccccceE
Confidence            567888888764 7777778877654489999999998887764    233221 111122  322333222 3478988


Q ss_pred             EeccC--------------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          231 VECTG--------------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       231 ld~~g--------------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +-...              ....++.+.+.|+|+ |.+++..
T Consensus       116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            74322              134688899999998 9998764

>PRK06484 short chain dehydrogenase; Validated

Probab=94.12  E-value=0.29  Score=47.82  Aligned_cols=79  Identities=28%  Similarity=0.421  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      ++.++||+|+ +++|.+.++.+...|+ +|+.++++.++.+. .++++...   .+|..+.+ .+.+.+.+...  +++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEA-QIREGFEQLHREFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence            5678999987 8999999999999999 88888888877654 44455432   23443322 13233333221  3699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99998763

>PRK07985 oxidoreductase; Provisional

Probab=94.11  E-value=0.84  Score=40.98  Aligned_cols=78  Identities=19%  Similarity=0.202  Sum_probs=46.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~--~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+.++.  ++.+.+    ++.+...   ..|..+.+ ...+.+.+... 
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEK-FARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHH-HHHHHHHHHHHH
Confidence            4568999987 9999999988888999 777775432  222222    2334321   23443322 12223333222 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|+++++.|
T Consensus       126 ~g~id~lv~~Ag  137 (294)
T PRK07985        126 LGGLDIMALVAG  137 (294)
T ss_pred             hCCCCEEEECCC
Confidence             36899998776

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.10  E-value=0.46  Score=42.64  Aligned_cols=94  Identities=19%  Similarity=0.244  Sum_probs=64.7

Q ss_pred             hccccchhhhhhhhhhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHHcCCceecCCCCCC
Q 019414          136 ILSCGVSTGLGATLNVAKP-ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKKFGVTDFVNTSEHD  212 (341)
Q Consensus       136 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~-~~~~~~~~~~~~g~~~vv~~~~~~  212 (341)
                      .+||+....+. +++.-.+ -.|.+|+|+| .+.+|.-++.++...|+ .|++.. ++..                    
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~--------------------  194 (296)
T PRK14188        137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD--------------------  194 (296)
T ss_pred             CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC--------------------
Confidence            35555333333 3344343 4799999999 59999999999999999 888873 3321                    


Q ss_pred             hhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          213 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       213 ~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                        +.+.++     ..|+|+-++|.+..+...|  ++++ ..++.+|...
T Consensus       195 --l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~  233 (296)
T PRK14188        195 --LPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR  233 (296)
T ss_pred             --HHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence              211121     3799999999987777665  8887 8999998643

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=94.10  E-value=0.38  Score=39.98  Aligned_cols=94  Identities=13%  Similarity=0.154  Sum_probs=57.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      ++++||=+|+|. |..++.+++.....+|++++.+++..+.++    +.+.+.+ .....+  ..+ +  ...+.+|+|+
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~d--~~~-~--~~~~~fD~I~  114 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNGR--AED-F--QHEEQFDVIT  114 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEecc--hhh-c--cccCCccEEE
Confidence            378888888753 555666666554448999999998766554    3454321 111111  211 1  1124799987


Q ss_pred             ec-cCC-hHHHHHHHHHhcCCCcEEEEE
Q 019414          232 EC-TGN-IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       232 d~-~g~-~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      -. ... +..++.+.+.|+++ |+++..
T Consensus       115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       115 SRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            43 222 34567788899998 998866

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK06720 hypothetical protein; Provisional

Probab=94.09  E-value=0.5  Score=38.77  Aligned_cols=38  Identities=24%  Similarity=0.151  Sum_probs=31.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF  194 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~  194 (341)
                      ++..++|.|+ +++|...+..+...|+ +|+.+++++++.
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~   53 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESG   53 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHH
Confidence            4678899987 8999999888888898 888888877654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.08  E-value=0.43  Score=41.66  Aligned_cols=78  Identities=23%  Similarity=0.325  Sum_probs=47.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      |.++||+|+ |++|.+.++.+...|+ +|+.+++++..  .+.+++.+...   ..|..+.+ +..+.+.+...  +++|
T Consensus        10 ~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993         10 GKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKID-GIPALLERAVAEFGHID   87 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhCCCC
Confidence            578999987 9999999999988999 78777654322  23344444321   12332211 12222322221  3699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK04266 fibrillarin; Provisional

Probab=94.07  E-value=0.77  Score=39.62  Aligned_cols=102  Identities=17%  Similarity=0.155  Sum_probs=60.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--c--eecCCCCCChhHHHHHHHHhcC
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T--DFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~--~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      +...+++|++||=.|+|. |..+..+++..+..+|++++.+++..+.+.+...  +  ..+..+..+  . .....+ .+
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~--~-~~~~~l-~~  140 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARK--P-ERYAHV-VE  140 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCC--c-chhhhc-cc
Confidence            346889999998888642 4445556666543489999999987764433211  1  111111111  0 000111 13


Q ss_pred             CccEEEeccCChH----HHHHHHHHhcCCCcEEEEE
Q 019414          226 GVDRSVECTGNID----NMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       226 ~~d~vld~~g~~~----~~~~~~~~l~~~~g~~v~~  257 (341)
                      .+|+++.-...+.    .++.+.+.|+|+ |++++.
T Consensus       141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            5999985443322    367888899998 998884

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=94.04  E-value=0.7  Score=37.20  Aligned_cols=96  Identities=22%  Similarity=0.301  Sum_probs=61.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC----ChhHHHHHHHHhcC-CccEEE
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNG-GVDRSV  231 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~----~~~~~~~i~~~~~~-~~d~vl  231 (341)
                      .+|+|+|+ |.+|.+.++.-|..++ -|..++-++..+     .....+++.+..    .....+++.+...+ ++|.||
T Consensus         4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            47899988 9999999999999999 888887665432     223344544332    11233333344445 899999


Q ss_pred             eccCCh------------------------H--HHHHHHHHhcCCCcEEEEEccC
Q 019414          232 ECTGNI------------------------D--NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       232 d~~g~~------------------------~--~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      -..|+.                        .  ....+-.+|+++ |-+.+.|..
T Consensus        78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGAk  131 (236)
T KOG4022|consen   78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGAK  131 (236)
T ss_pred             EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeecccc
Confidence            766531                        0  112345678897 888888753

>PLN00203 glutamyl-tRNA reductase

Probab=93.99  E-value=0.2  Score=48.65  Aligned_cols=73  Identities=21%  Similarity=0.302  Sum_probs=51.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcC-Cce-ecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG-VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g-~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      +.+|+|+|+|.+|.+++..+...|+..|+++.++.++.+.+. +++ ... +....+    ..+.+     ...|+||.|
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~d----l~~al-----~~aDVVIsA  336 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDE----MLACA-----AEADVVFTS  336 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhh----HHHHH-----hcCCEEEEc
Confidence            678999999999999999999999878999999988866554 453 221 111111    21111     258999999


Q ss_pred             cCChH
Q 019414          234 TGNID  238 (341)
Q Consensus       234 ~g~~~  238 (341)
                      ++++.
T Consensus       337 T~s~~  341 (519)
T PLN00203        337 TSSET  341 (519)
T ss_pred             cCCCC
Confidence            87644

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=93.98  E-value=0.37  Score=43.51  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=37.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  203 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~  203 (341)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~   45 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTT   45 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCc
Confidence            58889999999988888777888 888999999998888876653

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.98  E-value=0.49  Score=42.25  Aligned_cols=66  Identities=23%  Similarity=0.345  Sum_probs=47.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|.|+|.|.+|...+..++..|. .|++.++++++.+.+.+.|.....   ..+  . +.+     ...|+||.|+..
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~~~--~-~~~-----~~aDlVilavp~   67 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---STD--L-SLL-----KDCDLVILALPI   67 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---cCC--H-hHh-----cCCCEEEEcCCH
Confidence            58899999999988888888898 899999999998888877752111   111  1 111     247888888864

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.97  E-value=0.73  Score=42.29  Aligned_cols=87  Identities=20%  Similarity=0.278  Sum_probs=54.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.+.. ..+..+...    .  +  +.+.+.     ..|+|+-++.
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~----~--~--l~ell~-----~aDiV~l~lP  213 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY----R--P--LEELLR-----ESDFVSLHVP  213 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe----c--C--HHHHHh-----hCCEEEEeCC
Confidence            57899999999999999999999998 899998765433 233344321    1  1  322222     2577766654


Q ss_pred             ChH-H---H-HHHHHHhcCCCcEEEEEc
Q 019414          236 NID-N---M-ISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~~-~---~-~~~~~~l~~~~g~~v~~g  258 (341)
                      ..+ +   + ...+..++++ ..++.++
T Consensus       214 ~t~~T~~~i~~~~~~~mk~g-a~lIN~a  240 (333)
T PRK13243        214 LTKETYHMINEERLKLMKPT-AILVNTA  240 (333)
T ss_pred             CChHHhhccCHHHHhcCCCC-eEEEECc
Confidence            321 1   1 2455666665 6666554

>PLN02256 arogenate dehydrogenase

Probab=93.97  E-value=0.58  Score=42.32  Aligned_cols=49  Identities=22%  Similarity=0.364  Sum_probs=37.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  203 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~  203 (341)
                      .-..+.+|.|+|.|.+|...+..++..|. .|++++++.. .+.++++|+.
T Consensus        32 ~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~   80 (304)
T PLN02256         32 EKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVS   80 (304)
T ss_pred             ccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCe
Confidence            33455689999999999998888888887 8888888764 3556667653

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=93.96  E-value=0.43  Score=41.69  Aligned_cols=79  Identities=18%  Similarity=0.247  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ +++|...+..+...|+ +++.+++++++.+.+    ++.+...   ..|..+.+ ...+.+.....  +
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFALSKLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            3678999987 9999999988888899 777787777665432    2233321   23443322 12222322222  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            68999998773

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=93.95  E-value=0.68  Score=39.01  Aligned_cols=34  Identities=18%  Similarity=0.362  Sum_probs=30.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      ..+|+|+|+|++|.-.+..+-..|.+++..++.+
T Consensus        21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            5679999999999999999999999888888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=93.93  E-value=0.48  Score=43.03  Aligned_cols=88  Identities=17%  Similarity=0.274  Sum_probs=54.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++..     +.......  .+  +.+.+.     ..|+|+.+..
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~--~~--l~e~l~-----~aDvvv~~lP  199 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR--EE--LSAFLS-----QTRVLINLLP  199 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc--cc--HHHHHh-----cCCEEEECCC
Confidence            57899999999999999999999999 8888876554321     11111101  01  222221     3678777665


Q ss_pred             ChHH-----HHHHHHHhcCCCcEEEEEcc
Q 019414          236 NIDN-----MISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~~-----~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+.     -...+..++++ ..++.++-
T Consensus       200 lt~~T~~li~~~~l~~mk~g-a~lIN~aR  227 (312)
T PRK15469        200 NTPETVGIINQQLLEQLPDG-AYLLNLAR  227 (312)
T ss_pred             CCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence            3221     12456677776 77766663

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=93.92  E-value=0.65  Score=42.53  Aligned_cols=134  Identities=19%  Similarity=0.242  Sum_probs=79.9

Q ss_pred             EEEEECCCHHH-HHHHHHHHHcC--CCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414          159 SVAVFGLGAVG-LAAAEGARIAG--ASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  233 (341)
Q Consensus       159 ~vlI~G~g~~G-~~a~~la~~~g--~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~  233 (341)
                      +|.|+|+|.++ ...+..++..+  ...+..+++++++.+ ..+++|....  +.+    +.    ++... .+|+|+.+
T Consensus         5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~~~----~~----~ll~~~~iD~V~Ia   74 (342)
T COG0673           5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--YTD----LE----ELLADPDIDAVYIA   74 (342)
T ss_pred             EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--cCC----HH----HHhcCCCCCEEEEc
Confidence            57899987555 44565666554  445666678887744 5677887622  222    22    22233 59999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccc-ee--eecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NV--LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      +....+.+.+.+.|..  |+-|++.-+-....-+.... ..  .+++.+.-..  ..+....++.+-+++.+|++-
T Consensus        75 tp~~~H~e~~~~AL~a--GkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~--~~Rf~p~~~~~k~li~~g~lG  146 (342)
T COG0673          75 TPNALHAELALAALEA--GKHVLCEKPLALTLEEAEELVELARKAGVKLMVGF--NRRFDPAVQALKELIDSGALG  146 (342)
T ss_pred             CCChhhHHHHHHHHhc--CCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeeh--hhhcCHHHHHHHHHHhcCCcC
Confidence            9888889999999987  78888874322211111100 11  1233333222  222334688888999998663

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=93.87  E-value=0.48  Score=41.67  Aligned_cols=79  Identities=22%  Similarity=0.401  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ ...+.+.+...  +
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDED-GVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhCC
Confidence            4568999987 9999998888888899 788888887665432    2334321   23333321 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.86  E-value=1.3  Score=38.30  Aligned_cols=77  Identities=18%  Similarity=0.199  Sum_probs=44.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhH----HHHHHcCCce-e--cCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRF----EEAKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~----~~~~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |.+|...++-+...|+ .++.+.+ +.++.    ..+++.+... .  .|..+.+ .+...+.+...  +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE-GCETLAKATIDRYG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH-HHHHHHHHHHHHcC
Confidence            568999987 9999998888888999 5655443 32222    2233344321 1  2333322 12222222221  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|.+.|
T Consensus        84 ~~d~vi~~ag   93 (252)
T PRK06077         84 VADILVNNAG   93 (252)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=93.85  E-value=0.15  Score=39.57  Aligned_cols=79  Identities=24%  Similarity=0.333  Sum_probs=48.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~-~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .-+|-|+|+|.+|......++..|+ .|..+. ++.++.+.+.. ++...+.+..+           .. ...|++|-++
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iav   76 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAV   76 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEe
Confidence            3478999999999999999999998 777775 44445555544 34333322211           11 2589999999


Q ss_pred             CChHHHHHHHHHhcC
Q 019414          235 GNIDNMISAFECVHD  249 (341)
Q Consensus       235 g~~~~~~~~~~~l~~  249 (341)
                      .+ +.++..++.|..
T Consensus        77 pD-daI~~va~~La~   90 (127)
T PF10727_consen   77 PD-DAIAEVAEQLAQ   90 (127)
T ss_dssp             -C-CHHHHHHHHHHC
T ss_pred             ch-HHHHHHHHHHHH
Confidence            77 577777777764

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=93.85  E-value=0.33  Score=41.85  Aligned_cols=104  Identities=16%  Similarity=0.232  Sum_probs=64.4

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      .....++++++||=+|+|. |..+..+++..+. ..|++++.+++..+.+++    .+.+.+- ....+  ..+ + ...
T Consensus        38 l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~-~-~~~  111 (231)
T TIGR02752        38 MKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVE-LVHGN--AME-L-PFD  111 (231)
T ss_pred             HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceE-EEEec--hhc-C-CCC
Confidence            3456778899999998753 5566777777642 389999999988776654    2222210 00011  110 0 112


Q ss_pred             cCCccEEEeccC------ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 NGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~~~~d~vld~~g------~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .+.+|+|+-...      ....++++.+.|+++ |+++....
T Consensus       112 ~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  152 (231)
T TIGR02752       112 DNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET  152 (231)
T ss_pred             CCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence            247999874321      124577889999998 99987754

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.85  E-value=0.69  Score=42.31  Aligned_cols=90  Identities=20%  Similarity=0.093  Sum_probs=60.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee------cC--C-CCCChhHHHHHHHHhcCCccE
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF------VN--T-SEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v------v~--~-~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      +|.|+|+|.+|.+.+..+...|. .|...++++++.+.+++.+....      +.  . ...+  ..+.+     +..|+
T Consensus         6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~--~~e~~-----~~aD~   77 (328)
T PRK14618          6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD--PEEAL-----AGADF   77 (328)
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC--HHHHH-----cCCCE
Confidence            68999999999999998888898 89999998888777665421100      00  0 0011  22211     35899


Q ss_pred             EEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          230 SVECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ||-++.+. .++.+++.++++ -.++.+.
T Consensus        78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~  104 (328)
T PRK14618         78 AVVAVPSK-ALRETLAGLPRA-LGYVSCA  104 (328)
T ss_pred             EEEECchH-HHHHHHHhcCcC-CEEEEEe
Confidence            99999774 567777888875 5555553

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=93.85  E-value=0.53  Score=40.57  Aligned_cols=74  Identities=27%  Similarity=0.391  Sum_probs=53.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH--cCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK--FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~--~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +++|+|+|.+|...++.+...|. .|+.++.++++.+...+  +... ++..+..+   .+.+++.--..+|+++-++|.
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~---~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDATD---EDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecCCC---HHHHHhcCCCcCCEEEEeeCC
Confidence            57889999999999999999998 99999999999777333  5543 33233322   223444433379999988887


Q ss_pred             h
Q 019414          237 I  237 (341)
Q Consensus       237 ~  237 (341)
                      .
T Consensus        77 d   77 (225)
T COG0569          77 D   77 (225)
T ss_pred             C
Confidence            3

>PRK06523 short chain dehydrogenase; Provisional

Probab=93.84  E-value=0.29  Score=42.86  Aligned_cols=75  Identities=27%  Similarity=0.278  Sum_probs=46.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      +|.++||+|+ |++|...++.+...|+ +|+.+.+++++..   .-... ...|..+.+ .+.+.+.+...  +++|+++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTTAE-GCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            4678999987 9999999988888899 8888887755321   11111 123333322 12222222211  3699999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      ++.|
T Consensus        83 ~~ag   86 (260)
T PRK06523         83 HVLG   86 (260)
T ss_pred             ECCc
Confidence            9887

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.84  E-value=0.42  Score=41.48  Aligned_cols=78  Identities=27%  Similarity=0.305  Sum_probs=46.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHH----HHHcCCce-e--cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~-v~~~~~~~~~----~~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      ++.++||+|+ |.+|+..+..+...|+ +|+. ..++.++.+.    +++.+... .  .|..+.+ .....+.+...  
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVE-KIKEMFAQIDEEF   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            3568999987 9999999999988998 5554 4566655432    23334322 1  2333221 12222322221  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        81 ~~id~vi~~ag   91 (250)
T PRK08063         81 GRLDVFVNNAA   91 (250)
T ss_pred             CCCCEEEECCC
Confidence            36899999876

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.84  E-value=0.42  Score=47.77  Aligned_cols=77  Identities=14%  Similarity=0.280  Sum_probs=57.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      .++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+..+   .+.+++..-+.+|.++-++++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vvv~~~d  474 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATR---MDLLESAGAAKAEVLINAIDD  474 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCC---HHHHHhcCCCcCCEEEEEeCC
Confidence            3679999999999999999999998 899999999999999998875433 22222   112333222378999988877


Q ss_pred             hH
Q 019414          237 ID  238 (341)
Q Consensus       237 ~~  238 (341)
                      ++
T Consensus       475 ~~  476 (621)
T PRK03562        475 PQ  476 (621)
T ss_pred             HH
Confidence            54

>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed

Probab=93.83  E-value=0.9  Score=43.67  Aligned_cols=102  Identities=20%  Similarity=0.287  Sum_probs=63.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHH----HHcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~----~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      .+++|++||=..+++ |--++++|..++ -..|++.+.+..|.+.+    +++|+..+........    .+.....+.|
T Consensus       110 ~~~pg~~VLD~CAAP-GgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~----~~~~~~~~~f  184 (470)
T PRK11933        110 DDNAPQRVLDMAAAP-GSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGR----VFGAALPETF  184 (470)
T ss_pred             CCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchh----hhhhhchhhc
Confidence            678999988886543 223455565553 34899999999996654    5578865432222110    1112223468


Q ss_pred             cEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          228 DRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       228 d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      |.|+ |  |+|.                         .+.+..+++.|+++ |++|..-..
T Consensus       185 D~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpG-G~LVYSTCT  244 (470)
T PRK11933        185 DAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPG-GTLVYSTCT  244 (470)
T ss_pred             CeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEECCC
Confidence            8886 6  4543                         24567788999998 999776543

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=93.82  E-value=0.58  Score=42.70  Aligned_cols=100  Identities=19%  Similarity=0.288  Sum_probs=60.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC----CCEEEEEcC--ChhhHHHHHHcCCce--------------ecCCCCCChhHHHH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAG----ASRIIGVDR--SSKRFEEAKKFGVTD--------------FVNTSEHDRPIQEV  218 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g----~~~vv~v~~--~~~~~~~~~~~g~~~--------------vv~~~~~~~~~~~~  218 (341)
                      +|.|.|.|.+|...++.+...+    . .|+++-.  +.+.+.++.++.-.+              .++-..-.-.-.+.
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789999999999999887653    5 5666533  233344454433210              11100000000001


Q ss_pred             HHHHhc--CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          219 IAEMTN--GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       219 i~~~~~--~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ..+...  .++|+||+|+|.....+.+..++..| ++.|+++..
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP  122 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHP  122 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCC
Confidence            122222  38999999999877888899999987 888888855

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=93.82  E-value=0.43  Score=41.33  Aligned_cols=78  Identities=19%  Similarity=0.265  Sum_probs=45.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhh-HHHH---HHcCCcee---cCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKR-FEEA---KKFGVTDF---VNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~-~~~~---~~~g~~~v---v~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |++|...++.+...|+ +|+.. .++..+ .+.+   ++.+....   .|..+.+ .+.+.+.+...  +
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   80 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWD-STKAAFDKVKAEVG   80 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence            567899986 9999999999988998 56654 333332 2233   33444322   3333321 12222222221  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        81 ~id~li~~ag~   91 (246)
T PRK12938         81 EIDVLVNNAGI   91 (246)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=93.82  E-value=0.45  Score=43.64  Aligned_cols=99  Identities=21%  Similarity=0.295  Sum_probs=62.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .++.+||=+|+|. |..+..+++..+...+++++.+++..+.+++.....-+.....+  ..+ + ...++.||+|+-+.
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD--~e~-l-p~~~~sFDvVIs~~  186 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGD--AED-L-PFPTDYADRYVSAG  186 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEecc--HHh-C-CCCCCceeEEEEcC
Confidence            4678999898765 66777778776545899999998887777764221111111111  111 0 11123699887532


Q ss_pred             C-----C-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          235 G-----N-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       235 g-----~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .     . ...++++.+.|+++ |++++.+.
T Consensus       187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~  216 (340)
T PLN02490        187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP  216 (340)
T ss_pred             hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            1     1 24678999999998 99988753

>PRK08278 short chain dehydrogenase; Provisional

Probab=93.79  E-value=0.39  Score=42.56  Aligned_cols=36  Identities=28%  Similarity=0.413  Sum_probs=29.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      .+.++||+|+ |++|...+..+...|+ +|+.++++.+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~   41 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE   41 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence            4568999987 9999999988888899 8888887654

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=93.78  E-value=0.81  Score=42.50  Aligned_cols=97  Identities=16%  Similarity=0.313  Sum_probs=62.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEc--CChhh-HHHHHHcCCceecCCCCCC-hhH--------------H
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVD--RSSKR-FEEAKKFGVTDFVNTSEHD-RPI--------------Q  216 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~--g~~~vv~v~--~~~~~-~~~~~~~g~~~vv~~~~~~-~~~--------------~  216 (341)
                      .+|.|+|+ |++|..++.+.+..  .+ +|+++.  ++.++ .+.++++++..++..++.. ..+              .
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~   80 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE   80 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence            36889995 99999999998765  45 666664  34444 3456778887765443321 001              1


Q ss_pred             HHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEE
Q 019414          217 EVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL  256 (341)
Q Consensus       217 ~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~  256 (341)
                      +.+.++... .+|+|+.++++...+.-.+..+..+ -++.+
T Consensus        81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL  120 (385)
T PRK05447         81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL  120 (385)
T ss_pred             hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence            122223333 5899999988767778888888875 55444

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.77  E-value=0.42  Score=44.27  Aligned_cols=35  Identities=31%  Similarity=0.356  Sum_probs=31.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ..+|+|+|+|++|..+++.+-..|.+++..++.+.
T Consensus        28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            47899999999999999999999999999988764

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=93.76  E-value=0.61  Score=41.58  Aligned_cols=88  Identities=19%  Similarity=0.228  Sum_probs=61.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|.++|-|.+|.-+++=+...|+ .|.+.++++++ .+.+++.|+...-+       ..+...     ..|+||-+++++
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s-------~~eaa~-----~aDvVitmv~~~   68 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS-------PAEAAA-----EADVVITMLPDD   68 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC-------HHHHHH-----hCCEEEEecCCH
Confidence            57788999999999999999999 99999999999 88898888864321       111221     367888777776


Q ss_pred             HHHHHHH-------HHhcCCCcEEEEEccC
Q 019414          238 DNMISAF-------ECVHDGWGVAVLVGVP  260 (341)
Q Consensus       238 ~~~~~~~-------~~l~~~~g~~v~~g~~  260 (341)
                      +.....+       ..++++ ..++.+...
T Consensus        69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTi   97 (286)
T COG2084          69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTI   97 (286)
T ss_pred             HHHHHHHhCccchhhcCCCC-CEEEECCCC
Confidence            6555544       223354 666666543

>PRK05650 short chain dehydrogenase; Provisional

Probab=93.75  E-value=0.41  Score=42.24  Aligned_cols=76  Identities=21%  Similarity=0.240  Sum_probs=47.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      ++||+|+ |++|...+..+...|+ +|+.++++.++.+.+    +..+...   ..|..+.+ .+.+.+.....  +++|
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYS-QLTALAQACEEKWGGID   79 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence            6899987 9999999888888899 788888887765432    2233322   12332221 12222222221  3699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus        80 ~lI~~ag~   87 (270)
T PRK05650         80 VIVNNAGV   87 (270)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK06484 short chain dehydrogenase; Validated

Probab=93.75  E-value=0.5  Score=46.10  Aligned_cols=79  Identities=22%  Similarity=0.344  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++...   ..|..+.+ ...+.+.+...  +.+|
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id  345 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRLD  345 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence            5678999987 9999999998888999 89999888877665543 44332   23443332 12222322221  3699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus       346 ~li~nAg~  353 (520)
T PRK06484        346 VLVNNAGI  353 (520)
T ss_pred             EEEECCCC
Confidence            99998773

>PLN03013 cysteine synthase

Probab=93.74  E-value=1.3  Score=41.96  Aligned_cols=57  Identities=26%  Similarity=0.160  Sum_probs=43.4

Q ss_pred             hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHHcCCceec
Q 019414          150 NVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFV  206 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~--~~~~~~~~~~~~g~~~vv  206 (341)
                      +...+.+|.+.+|.. +|+.|++.+.+++.+|++-++++.  .+++|.+.++.+|++.++
T Consensus       167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~  226 (429)
T PLN03013        167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL  226 (429)
T ss_pred             HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence            445677886666665 599999999999999995444443  366888999999997653

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=93.73  E-value=1  Score=42.92  Aligned_cols=105  Identities=18%  Similarity=0.267  Sum_probs=64.5

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ...++++|++||=.|+|+ |--++.++...+ ...|++++.++++.+.+++    +|.+.+. ....+  .. .+.....
T Consensus       231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~-~~~~D--a~-~l~~~~~  305 (431)
T PRK14903        231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIE-IKIAD--AE-RLTEYVQ  305 (431)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEE-EEECc--hh-hhhhhhh
Confidence            345788999988887643 444555666552 2399999999999887654    5664321 11111  11 1111223


Q ss_pred             CCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          225 GGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       225 ~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +.||.|+ |  |+|.                         .+.+..+++.++++ |.++.....
T Consensus       306 ~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs  368 (431)
T PRK14903        306 DTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT  368 (431)
T ss_pred             ccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence            4699987 4  4332                         12366788999998 998777654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=93.73  E-value=0.67  Score=40.20  Aligned_cols=42  Identities=24%  Similarity=0.295  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH
Q 019414          153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE  195 (341)
Q Consensus       153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~  195 (341)
                      +..++.++||+|+ |.+|...++.+...|+ .|+.++++.++.+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~   50 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLE   50 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHH
Confidence            3457889999987 9999999888888899 8888888876643

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.71  E-value=0.61  Score=41.87  Aligned_cols=94  Identities=22%  Similarity=0.234  Sum_probs=65.8

Q ss_pred             hccccchhhhhhhhhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh
Q 019414          136 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  213 (341)
Q Consensus       136 ~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~  213 (341)
                      .+||+....+. +++.-++ -.|.+|.|+|. +.+|.-++.++...|+ .|++..+..+                   + 
T Consensus       138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------~-  195 (301)
T PRK14194        138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------D-  195 (301)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC-------------------C-
Confidence            45655333333 3444444 36899999997 6999999999999999 8888854422                   1 


Q ss_pred             hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          214 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       214 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                       ..+..+     ..|+|+-++|.+..+...|  ++++ ..++.+|..
T Consensus       196 -l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin  233 (301)
T PRK14194        196 -AKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN  233 (301)
T ss_pred             -HHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence             222222     3799999999887777665  8887 899998854

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.69  E-value=0.58  Score=41.53  Aligned_cols=78  Identities=23%  Similarity=0.385  Sum_probs=46.9

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHH-HHHcCCce--ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEE-AKKFGVTD--FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~---~~~~~-~~~~g~~~--vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+   +++|++.++.+...|+ +|+.+.+++   ++.+. .++++...  ..|..+.+ ...+.+.+...  
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   86 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEA-SIDAVFETLEKKW   86 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHH-HHHHHHHHHHHhc
Confidence            4678999986   5899999988888999 777776654   22222 23345322  23333321 12222222222  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|+++++.|
T Consensus        87 g~iD~lv~nAG   97 (272)
T PRK08159         87 GKLDFVVHAIG   97 (272)
T ss_pred             CCCcEEEECCc
Confidence            36999999876

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=93.69  E-value=0.76  Score=39.42  Aligned_cols=101  Identities=19%  Similarity=0.111  Sum_probs=60.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceecC-------CCCCChh-HHHHHHHH-
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEM-  222 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vv~-------~~~~~~~-~~~~i~~~-  222 (341)
                      .+.++.+||+.|+|. |.-++.||. .|+ .|++++.++...+.+ ++.+......       +...+.. +...+.++ 
T Consensus        34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~  110 (218)
T PRK13255         34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT  110 (218)
T ss_pred             CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence            456778999998864 777777775 698 999999999988865 3333321100       0000000 00001111 


Q ss_pred             --hcCCccEEEeccC----C----hHHHHHHHHHhcCCCcEEEEE
Q 019414          223 --TNGGVDRSVECTG----N----IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       223 --~~~~~d~vld~~g----~----~~~~~~~~~~l~~~~g~~v~~  257 (341)
                        ..+.||.|+|...    .    ...++.+.++|+|+ |++.++
T Consensus       111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~  154 (218)
T PRK13255        111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV  154 (218)
T ss_pred             cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence              1126899998542    1    24578889999998 875543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=93.68  E-value=0.43  Score=41.70  Aligned_cols=76  Identities=17%  Similarity=0.174  Sum_probs=47.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc--CCcee-cCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~--g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      .+.+|||+|+ |.+|...+..+...|+ .|+++.++.++.......  ++..+ .|..+.    .+.+.+....++|+||
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG----SDKLVEAIGDDSDAVI   90 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCC----HHHHHHHhhcCCCEEE
Confidence            3568999997 9999999888888898 888887887765432211  22222 233331    1122222222689999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      .+.|.
T Consensus        91 ~~~g~   95 (251)
T PLN00141         91 CATGF   95 (251)
T ss_pred             ECCCC
Confidence            88763

>PRK11579 putative oxidoreductase; Provisional

Probab=93.67  E-value=0.94  Score=41.78  Aligned_cols=131  Identities=17%  Similarity=0.161  Sum_probs=72.6

Q ss_pred             EEEEECCCHHHH-HHHHHH-HHcCCCEEEE-EcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGL-AAAEGA-RIAGASRIIG-VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~-~a~~la-~~~g~~~vv~-v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|.|.+|. ..+... +.-++ ++++ +++++++..  ++++...+  +.+    +.+.+.   ...+|+|+.|+.
T Consensus         6 rvgiiG~G~i~~~~~~~~~~~~~~~-~l~av~d~~~~~~~--~~~~~~~~--~~~----~~ell~---~~~vD~V~I~tp   73 (346)
T PRK11579          6 RVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDATKVK--ADWPTVTV--VSE----PQHLFN---DPNIDLIVIPTP   73 (346)
T ss_pred             eEEEECCCHHHHHHHHHHHhhCCCC-EEEEEECCCHHHHH--hhCCCCce--eCC----HHHHhc---CCCCCEEEEcCC
Confidence            689999999986 344433 44467 5554 444544432  33432222  111    332221   237999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  305 (341)
                      .....+.+.+++..  |+-|++.-+-....-...   ...-.+++.+.-..  +.+....++.+-+++++|.|
T Consensus        74 ~~~H~~~~~~al~a--GkhVl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~--~~R~~p~~~~~k~~i~~g~i  142 (346)
T PRK11579         74 NDTHFPLAKAALEA--GKHVVVDKPFTVTLSQARELDALAKSAGRVLSVFH--NRRWDSDFLTLKALLAEGVL  142 (346)
T ss_pred             cHHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe--eccCCHHHHHHHHHHhcCCC
Confidence            87888899999876  677778633211110000   00012344443222  22223468888899999866

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=93.61  E-value=0.41  Score=41.22  Aligned_cols=105  Identities=16%  Similarity=0.204  Sum_probs=65.8

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHcCCc----eecCCCCCChhHHHHHHHHhc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ......++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-..    ..+.....+  +.+.  ....
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~--~~~~  119 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGD--AEAL--PFPD  119 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecc--cccC--CCCC
Confidence            334566788999999876 778888888775 23999999999888877764211    111111111  1110  0122


Q ss_pred             CCccEEEeccC------ChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          225 GGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       225 ~~~d~vld~~g------~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +.+|+|+-...      ....+..+.+.|+++ |+++.....
T Consensus       120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~  160 (239)
T PRK00216        120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS  160 (239)
T ss_pred             CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence            36898874211      234678889999998 999887643

>PRK12743 oxidoreductase; Provisional

Probab=93.58  E-value=0.53  Score=41.17  Aligned_cols=78  Identities=18%  Similarity=0.151  Sum_probs=46.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHH----HHHHcCCce-e--cCCCCCCh--hHHHHHHHHhcC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFE----EAKKFGVTD-F--VNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~-~~~~~~~----~~~~~g~~~-v--v~~~~~~~--~~~~~i~~~~~~  225 (341)
                      +.++||+|+ |++|...++.+...|+ +|+.+. ++.++.+    .++..+... .  .|..+.+.  .+.+.+.+.. +
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            457999987 9999999999999999 666654 4444432    233345322 1  34333220  1222232222 3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999998773

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.56  E-value=0.32  Score=43.50  Aligned_cols=43  Identities=26%  Similarity=0.274  Sum_probs=36.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  198 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~  198 (341)
                      .+.+++|+|+|+.+.+++.-+...|+++++.+.++.+|.+.+.
T Consensus       126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            4678999999999999988888899889999999988866543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=93.55  E-value=0.45  Score=42.48  Aligned_cols=75  Identities=16%  Similarity=0.181  Sum_probs=45.1

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCcee-----cCCCCCChhHHHHHHHHhcC-Cc
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF-----VNTSEHDRPIQEVIAEMTNG-GV  227 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~~v-----v~~~~~~~~~~~~i~~~~~~-~~  227 (341)
                      |||+|+ |.+|...++-+...+.++++.+++++.++..++. +    ....+     ....+-.  -.+.+.+.... ++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvr--d~~~l~~~~~~~~p   78 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVR--DKERLNRIFEEYKP   78 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCC--HHHHHHHHTT--T-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeeccc--CHHHHHHHHhhcCC
Confidence            789986 9999998888888887799999999988766543 4    11111     0111111  34456666665 89


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+||++..-
T Consensus        79 diVfHaAA~   87 (293)
T PF02719_consen   79 DIVFHAAAL   87 (293)
T ss_dssp             SEEEE----
T ss_pred             CEEEEChhc
Confidence            999998763

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=93.55  E-value=0.61  Score=43.44  Aligned_cols=35  Identities=29%  Similarity=0.427  Sum_probs=31.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      .+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45689999999999999999999999899999876

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=93.53  E-value=0.47  Score=40.90  Aligned_cols=69  Identities=22%  Similarity=0.304  Sum_probs=48.2

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~--~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      |+|+|+ |.+|...++.+...+. +|.++.|+..  ..+.+++.|+..+ .|+.  +   .+.+.+... ++|.||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~--~---~~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVEADYD--D---PESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEeecccC--C---HHHHHHHHc-CCceEEeecC
Confidence            789997 9999999999988888 7777777754  3556778888654 2222  2   223333332 6999998887

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=93.53  E-value=0.63  Score=42.03  Aligned_cols=44  Identities=27%  Similarity=0.447  Sum_probs=37.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  203 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~  203 (341)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus         2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~   45 (301)
T PRK09599          2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT   45 (301)
T ss_pred             EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence            58889999999988888888898 889999999988877776653

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=93.52  E-value=0.56  Score=42.22  Aligned_cols=43  Identities=23%  Similarity=0.383  Sum_probs=35.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  202 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~  202 (341)
                      +|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|.
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~   44 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGL   44 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCC
Confidence            58999999999988888877887 88888888888777776554

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.52  E-value=2.2  Score=38.91  Aligned_cols=38  Identities=18%  Similarity=0.243  Sum_probs=33.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE  196 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~  196 (341)
                      .+|.|+|+|.+|...++.+...|+ .|+..+.+++..+.
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~   45 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA   45 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence            479999999999999998889999 99999998876554

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=93.51  E-value=0.64  Score=41.00  Aligned_cols=78  Identities=21%  Similarity=0.290  Sum_probs=46.1

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCce--ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD--FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~--vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ +  ++|.+.++.+...|+ +|+.+.++++..+.++++    +...  ..|..+.+ .+.+.+.+...  
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDA-SIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHH-HHHHHHHHHHhhc
Confidence            4678999987 3  899998888888899 777777763222223322    2111  23433322 13333333222  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|+++++.|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            36999999886

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=93.49  E-value=0.49  Score=44.63  Aligned_cols=74  Identities=22%  Similarity=0.318  Sum_probs=47.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc-ee--cCCCCCChhHHHHHHHHhcCCccEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~v--v~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      .+.+++|+|+ |++|.+.+..+...|+ +|+++++++++.+.. .+.+.. ..  .|..+.     +.+.+.. +++|++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-----~~v~~~l-~~IDiL  249 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-----AALAELL-EKVDIL  249 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-----HHHHHHh-CCCCEE
Confidence            3678999987 9999999988888899 888888877665332 211111 11  233221     1233322 369999


Q ss_pred             EeccCC
Q 019414          231 VECTGN  236 (341)
Q Consensus       231 ld~~g~  236 (341)
                      |++.|.
T Consensus       250 InnAGi  255 (406)
T PRK07424        250 IINHGI  255 (406)
T ss_pred             EECCCc
Confidence            987763

>PRK13984 putative oxidoreductase; Provisional

Probab=93.48  E-value=0.46  Score=47.43  Aligned_cols=77  Identities=27%  Similarity=0.294  Sum_probs=53.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHHcCCceecCCCCC-
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEH-  211 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~---------------------~~~~~~~~~g~~~vv~~~~~-  211 (341)
                      .+++.+|+|+|+|..|+.++..++..|. .|+++++.+                     ...+.++++|++..++..-. 
T Consensus       280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~  358 (604)
T PRK13984        280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK  358 (604)
T ss_pred             ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence            4568889999999999999999999998 787776543                     12456677888765543321 


Q ss_pred             ChhHHHHHHHHhcCCccEEEeccCC
Q 019414          212 DRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       212 ~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +... +.++    ..+|.+|-++|+
T Consensus       359 ~~~~-~~~~----~~yD~vilAtGa  378 (604)
T PRK13984        359 DIPL-EELR----EKHDAVFLSTGF  378 (604)
T ss_pred             cCCH-HHHH----hcCCEEEEEcCc
Confidence            1012 1221    269999999985

>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2

Probab=93.48  E-value=0.2  Score=43.82  Aligned_cols=95  Identities=21%  Similarity=0.181  Sum_probs=61.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc----------eecCCCCCChhHHHHHHHHhcC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----------DFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~----------~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ...+|||+|+|. |..+-.+++....+.|.+++-+++=.+.++++-..          .++ .  .|  ..+-+++ +.+
T Consensus        76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~-~--~D--g~~~l~~-~~~  148 (246)
T PF01564_consen   76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRII-I--GD--GRKFLKE-TQE  148 (246)
T ss_dssp             ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEE-E--ST--HHHHHHT-SSS
T ss_pred             CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEE-E--hh--hHHHHHh-ccC
Confidence            568899998654 45566777777667999999999998988874221          111 1  11  3334444 334


Q ss_pred             -CccEEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          226 -GVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       226 -~~d~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                       .+|+|+ |...         +.+-++.+.++|+++ |.++.-.
T Consensus       149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~  191 (246)
T PF01564_consen  149 EKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA  191 (246)
T ss_dssp             T-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence             799987 6543         235688899999998 9888765

5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....

>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]

Probab=93.46  E-value=0.42  Score=40.40  Aligned_cols=96  Identities=18%  Similarity=0.102  Sum_probs=69.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEE
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  230 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~v  230 (341)
                      ..+.+-.+|.=+|+|+ |..+-+|+++.....+.++++|.+..+.+++...+.-+        ....++.+.++ ..|++
T Consensus        26 Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f--------~~aDl~~w~p~~~~dll   96 (257)
T COG4106          26 VPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATF--------EEADLRTWKPEQPTDLL   96 (257)
T ss_pred             CCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCce--------ecccHhhcCCCCccchh
Confidence            3445566777778876 88899999999655999999999999998877665332        12235666666 77887


Q ss_pred             EeccC------ChHHHHHHHHHhcCCCcEEEEE
Q 019414          231 VECTG------NIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       231 ld~~g------~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      |-..-      -++.+++.+..|.|+ |.+..-
T Consensus        97 faNAvlqWlpdH~~ll~rL~~~L~Pg-g~LAVQ  128 (257)
T COG4106          97 FANAVLQWLPDHPELLPRLVSQLAPG-GVLAVQ  128 (257)
T ss_pred             hhhhhhhhccccHHHHHHHHHhhCCC-ceEEEE
Confidence            74321      246789999999997 776543

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.42  E-value=0.44  Score=42.59  Aligned_cols=83  Identities=29%  Similarity=0.421  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecC---CCCCC----hhHHHHHHHHh
Q 019414          153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVN---TSEHD----RPIQEVIAEMT  223 (341)
Q Consensus       153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~---~~~~~----~~~~~~i~~~~  223 (341)
                      +.+|.-.|+|+|+ .++|++.+..++..|+ .|..+.++.+|+..+++ ++....+.   +.+.|    +.....++++-
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga-~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~  107 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGA-DVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELR  107 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccC-ceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhh
Confidence            4455578999975 8999999999999999 88888899988776543 44322111   21111    11333344432


Q ss_pred             --cCCccEEEeccCC
Q 019414          224 --NGGVDRSVECTGN  236 (341)
Q Consensus       224 --~~~~d~vld~~g~  236 (341)
                        .+.+|.+|.|.|.
T Consensus       108 ~~~~~~d~l~~cAG~  122 (331)
T KOG1210|consen  108 DLEGPIDNLFCCAGV  122 (331)
T ss_pred             hccCCcceEEEecCc
Confidence              2379999999985

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.42  E-value=0.56  Score=40.69  Aligned_cols=78  Identities=18%  Similarity=0.196  Sum_probs=45.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH-HHcCCce---ecCCCCCCh--hHHHHHHHHhcCCcc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA-KKFGVTD---FVNTSEHDR--PIQEVIAEMTNGGVD  228 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~~-~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~~~d  228 (341)
                      +.++||+|+ |++|...+..+...|+ +|+.+ .+++++.+.+ .+++...   ..|..+.+.  .+.+.+.+..+.++|
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            457999986 9999999998888899 66554 3444444333 3343221   124333220  122223333333499


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9998765

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=93.41  E-value=0.5  Score=40.44  Aligned_cols=71  Identities=17%  Similarity=0.220  Sum_probs=46.3

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce-ecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~-vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      |||+|+ |-+|..++..+...|. .|+.+.++......... ..... ..|..+.  +.   +.+...+ .+|.||++.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~--~~---~~~~~~~~~~d~vi~~a~   74 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLTDK--EQ---LEKLLEKANIDVVIHLAA   74 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETTSH--HH---HHHHHHHHTESEEEEEBS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeecccc--cc---ccccccccCceEEEEeec
Confidence            789987 9999999999999999 67777676665544333 23322 2233322  12   2222223 6899999987


Q ss_pred             C
Q 019414          236 N  236 (341)
Q Consensus       236 ~  236 (341)
                      .
T Consensus        75 ~   75 (236)
T PF01370_consen   75 F   75 (236)
T ss_dssp             S
T ss_pred             c
Confidence            5

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.40  E-value=0.59  Score=40.33  Aligned_cols=78  Identities=23%  Similarity=0.340  Sum_probs=46.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHHH----HcCCce-e--cCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~~~----~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |.+|...+..+...|+ +|+.+ .++.++.+.+.    ..+... +  .|..+.+ .+.+.+.....  +
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEE-DVENLVEQIVEKFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhC
Confidence            458999987 9999998888777898 77777 78776654332    222211 1  2333322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            69999998764

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=93.35  E-value=0.6  Score=46.55  Aligned_cols=94  Identities=12%  Similarity=0.129  Sum_probs=64.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      ++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++ -+..+   .+.+++.--+..|.++-+.+++
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vv~~~~d~  475 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDATQ---LELLRAAGAEKAEAIVITCNEP  475 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeCCC---HHHHHhcCCccCCEEEEEeCCH
Confidence            579999999999999999999998 899999999999999998875443 22222   1223332223789999888875


Q ss_pred             HHHH---HHHHHhcCCCcEEEEE
Q 019414          238 DNMI---SAFECVHDGWGVAVLV  257 (341)
Q Consensus       238 ~~~~---~~~~~l~~~~g~~v~~  257 (341)
                      +.-.   +..+...|. -+++.-
T Consensus       476 ~~n~~i~~~~r~~~p~-~~IiaR  497 (601)
T PRK03659        476 EDTMKIVELCQQHFPH-LHILAR  497 (601)
T ss_pred             HHHHHHHHHHHHHCCC-CeEEEE
Confidence            4322   233444555 455443

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=93.31  E-value=1.5  Score=41.58  Aligned_cols=73  Identities=23%  Similarity=0.367  Sum_probs=50.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHH---------hc-CCc
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM---------TN-GGV  227 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~---------~~-~~~  227 (341)
                      .+|.|+|.|.+|+.++..+...|. .|+++++++++.+.++. |...+   .+..  +.+.+++.         +. ...
T Consensus         4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~---~e~~--l~~~l~~~~~~g~l~~~~~~~~a   76 (415)
T PRK11064          4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI---VEPD--LDMVVKTAVEGGYLRATTTPEPA   76 (415)
T ss_pred             cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc---CCCC--HHHHHHHHhhcCceeeecccccC
Confidence            468999999999999888888898 99999999999887643 33211   2222  33332211         11 157


Q ss_pred             cEEEeccCCh
Q 019414          228 DRSVECTGNI  237 (341)
Q Consensus       228 d~vld~~g~~  237 (341)
                      |++|-|++.+
T Consensus        77 Dvvii~vptp   86 (415)
T PRK11064         77 DAFLIAVPTP   86 (415)
T ss_pred             CEEEEEcCCC
Confidence            9999998875

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=93.30  E-value=0.61  Score=42.09  Aligned_cols=44  Identities=32%  Similarity=0.548  Sum_probs=37.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  203 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~  203 (341)
                      +|.++|.|.+|...+.-+...|. .|++.++++++.+.+++.|+.
T Consensus         2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~   45 (299)
T PRK12490          2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGIT   45 (299)
T ss_pred             EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCe
Confidence            47889999999988888888888 888899999988888777753

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=93.28  E-value=1.2  Score=40.29  Aligned_cols=87  Identities=24%  Similarity=0.325  Sum_probs=58.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -.|.+|.|+|-|.+|++.++.++.+|. +|++..+.....+.++..|+. +.     +  +.+.+.     ..|+|+-++
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-----s--l~Eaak-----~ADVV~llL   79 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-----S--VSEAVR-----TAQVVQMLL   79 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-----C--HHHHHh-----cCCEEEEeC
Confidence            367899999999999999999999999 777765655555666666763 21     1  333332     379998877


Q ss_pred             CChHH---H-HHHHHHhcCCCcEEEE
Q 019414          235 GNIDN---M-ISAFECVHDGWGVAVL  256 (341)
Q Consensus       235 g~~~~---~-~~~~~~l~~~~g~~v~  256 (341)
                      ..+..   + ...+..++++ ..+++
T Consensus        80 Pd~~t~~V~~~eil~~MK~G-aiL~f  104 (335)
T PRK13403         80 PDEQQAHVYKAEVEENLREG-QMLLF  104 (335)
T ss_pred             CChHHHHHHHHHHHhcCCCC-CEEEE
Confidence            65332   2 2355666674 44433

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=93.27  E-value=1.6  Score=36.32  Aligned_cols=40  Identities=38%  Similarity=0.596  Sum_probs=32.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  199 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~  199 (341)
                      +|-|+|.|-+|+-++......|. +|++++.++++.+.+.+
T Consensus         2 ~I~ViGlGyvGl~~A~~lA~~G~-~V~g~D~~~~~v~~l~~   41 (185)
T PF03721_consen    2 KIAVIGLGYVGLPLAAALAEKGH-QVIGVDIDEEKVEALNN   41 (185)
T ss_dssp             EEEEE--STTHHHHHHHHHHTTS-EEEEE-S-HHHHHHHHT
T ss_pred             EEEEECCCcchHHHHHHHHhCCC-EEEEEeCChHHHHHHhh
Confidence            57899999999999999999998 99999999999988765

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=93.25  E-value=0.35  Score=42.53  Aligned_cols=75  Identities=21%  Similarity=0.302  Sum_probs=46.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.   ..+.. ..|..+.+ .+.+.+.....  +++|+++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSAE-EVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            3568999986 9999999999888999 88888777654321   11111 23433321 12222322221  3689999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      ++.|
T Consensus        83 ~~Ag   86 (266)
T PRK06171         83 NNAG   86 (266)
T ss_pred             ECCc
Confidence            9877

>PRK09135 pteridine reductase; Provisional

Probab=93.24  E-value=0.7  Score=39.91  Aligned_cols=35  Identities=23%  Similarity=0.167  Sum_probs=29.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .+.++||+|+ |.+|..+++.+...|+ +|+.++++.
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~   40 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS   40 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence            3568999987 9999999888888899 888887753

>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]

Probab=93.21  E-value=0.66  Score=42.97  Aligned_cols=104  Identities=28%  Similarity=0.440  Sum_probs=66.1

Q ss_pred             hhcCCCCCCEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce--ecCCCCCChhHHHHHHH
Q 019414          150 NVAKPERGSSVAVFG-L-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--FVNTSEHDRPIQEVIAE  221 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G-~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~--vv~~~~~~~~~~~~i~~  221 (341)
                      ....++||++||=.- + |+=-...+|+....|. .|++.+.++.|.+.+    +.+|...  ++...+..  +.   ..
T Consensus       150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~--~~---~~  223 (355)
T COG0144         150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARR--LA---EL  223 (355)
T ss_pred             HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccccc--cc---cc
Confidence            457899999998873 3 5443434444444455 789999999997765    4588874  33332211  11   11


Q ss_pred             HhcC-CccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          222 MTNG-GVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       222 ~~~~-~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ...+ .||.|+ |  |+|.                         .+.+..+++.++++ |+++.....
T Consensus       224 ~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~G-G~LVYSTCS  290 (355)
T COG0144         224 LPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPG-GVLVYSTCS  290 (355)
T ss_pred             ccccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEccC
Confidence            1222 489875 6  4543                         25677899999997 999887653

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=93.19  E-value=1.2  Score=40.91  Aligned_cols=86  Identities=22%  Similarity=0.216  Sum_probs=55.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.+.....    ..    +. .+  +.+.+     ...|+|+-++.
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~-~~--l~ell-----~~aDiVil~lP  207 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YK-DS--VKEAI-----KDADIISLHVP  207 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----cc-CC--HHHHH-----hcCCEEEEeCC
Confidence            56789999999999999999999998 899998876543211    00    10 01  22222     13788887776


Q ss_pred             ChH-----HHHHHHHHhcCCCcEEEEEcc
Q 019414          236 NID-----NMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~-----~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+     .....+..++++ ..++.++-
T Consensus       208 ~t~~t~~li~~~~l~~mk~g-avlIN~aR  235 (330)
T PRK12480        208 ANKESYHLFDKAMFDHVKKG-AILVNAAR  235 (330)
T ss_pred             CcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence            432     123455667776 66666653

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=93.16  E-value=0.61  Score=42.34  Aligned_cols=38  Identities=18%  Similarity=0.123  Sum_probs=30.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF  194 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~  194 (341)
                      .|.+|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~   42 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR   42 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence            4678999986 9999999988888898 787776766543

>PRK07791 short chain dehydrogenase; Provisional

Probab=93.16  E-value=0.76  Score=41.07  Aligned_cols=35  Identities=34%  Similarity=0.411  Sum_probs=28.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.++++.
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~   40 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV   40 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            4678999987 9999999888888899 777776553

>PRK12937 short chain dehydrogenase; Provisional

Probab=93.14  E-value=0.76  Score=39.65  Aligned_cols=79  Identities=16%  Similarity=0.165  Sum_probs=45.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHH----HHHHcCCce---ecCCCCCChhHHHHHHHHh--c
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMT--N  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~----~~~~~g~~~---vv~~~~~~~~~~~~i~~~~--~  224 (341)
                      ++.++||+|+ |++|...++.+...|+ +++.+.++. ++.+    .++..+...   .+|..+.+ .+.+.+.+..  .
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAA-AVTRLFDAAETAF   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHc
Confidence            4578999986 9999999999999999 666655543 2222    223334321   12333221 1222222221  1


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|.+.|.
T Consensus        82 ~~id~vi~~ag~   93 (245)
T PRK12937         82 GRIDVLVNNAGV   93 (245)
T ss_pred             CCCCEEEECCCC
Confidence            369999998873

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=93.12  E-value=0.49  Score=42.87  Aligned_cols=95  Identities=16%  Similarity=0.155  Sum_probs=53.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CCceecCCCCCChhHHH-HHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEHDRPIQE-VIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~~vv~~~~~~~~~~~-~i~~~~~~~~d~vld~~g~  236 (341)
                      +|+|+|+|++|....-.+...|. .|..+++++++.+.+++- |.. +.+..... .+.- .......+.+|++|-|+=+
T Consensus         4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~~-~~~~~~~~~~~~~~~D~viv~vK~   80 (305)
T PRK05708          4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQAS-LYAIPAETADAAEPIHRLLLACKA   80 (305)
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCcce-eeccCCCCcccccccCEEEEECCH
Confidence            58999999999887766667787 788888887777776653 432 21111100 0000 0000011368999988643


Q ss_pred             h---HHHHHHHHHhcCCCcEEEEE
Q 019414          237 I---DNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       237 ~---~~~~~~~~~l~~~~g~~v~~  257 (341)
                      .   +.++++...+.++ ..++.+
T Consensus        81 ~~~~~al~~l~~~l~~~-t~vv~l  103 (305)
T PRK05708         81 YDAEPAVASLAHRLAPG-AELLLL  103 (305)
T ss_pred             HhHHHHHHHHHhhCCCC-CEEEEE
Confidence            2   2334444555665 555544

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=93.11  E-value=0.93  Score=43.42  Aligned_cols=104  Identities=17%  Similarity=0.356  Sum_probs=61.9

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHhc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ...+++++++||=.|+|. |..++.+++.. +...|++++.++++.+.++    .+|.+.+ .....|  ..+....+ .
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v-~~~~~D--~~~~~~~~-~  318 (444)
T PRK14902        244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNI-ETKALD--ARKVHEKF-A  318 (444)
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeE-EEEeCC--cccccchh-c
Confidence            345678899988887643 44455556554 2349999999999877664    3565432 111111  11111111 1


Q ss_pred             CCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          225 GGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       225 ~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +.||.|+ |  |+|.                         .+.+..+++.|+++ |+++....
T Consensus       319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvystc  380 (444)
T PRK14902        319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYSTC  380 (444)
T ss_pred             ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEcC
Confidence            4699986 5  3332                         13477788999998 99986543

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=93.10  E-value=0.92  Score=38.85  Aligned_cols=46  Identities=30%  Similarity=0.372  Sum_probs=37.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh----------hhHHHHHHcC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS----------KRFEEAKKFG  201 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~----------~~~~~~~~~g  201 (341)
                      .|.+|+|.|.|.+|+.+++++...|.+.|.+++.+.          +..+..++.+
T Consensus        22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~   77 (217)
T cd05211          22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG   77 (217)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence            578999999999999999999999986666677666          5666665554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.10  E-value=0.79  Score=40.82  Aligned_cols=94  Identities=19%  Similarity=0.270  Sum_probs=64.5

Q ss_pred             hccccchhhhhhhhhhcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh
Q 019414          136 ILSCGVSTGLGATLNVAKPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  213 (341)
Q Consensus       136 ~l~~~~~ta~~~l~~~~~~~-~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~  213 (341)
                      ..||+....+. +++..++. .|.+++|+|- ..+|.-.++++...|+ .|+.+.+...                   + 
T Consensus       138 ~~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T~-------------------~-  195 (285)
T PRK10792        138 LRPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFTK-------------------N-  195 (285)
T ss_pred             CCCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCCC-------------------C-
Confidence            34555443333 34444443 6999999997 5699999999999998 7777754311                   1 


Q ss_pred             hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          214 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       214 ~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                       +.+.++     ..|+++.++|.+..+..  ..++++ ..++.+|..
T Consensus       196 -l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin  233 (285)
T PRK10792        196 -LRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN  233 (285)
T ss_pred             -HHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence             322232     38999999998776554  678897 899999854

>PRK06940 short chain dehydrogenase; Provisional

Probab=93.08  E-value=0.83  Score=40.55  Aligned_cols=76  Identities=28%  Similarity=0.388  Sum_probs=46.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---HcCCce---ecCCCCCChhHHHHHHHHh-cCCccE
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K---KFGVTD---FVNTSEHDRPIQEVIAEMT-NGGVDR  229 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~---vv~~~~~~~~~~~~i~~~~-~~~~d~  229 (341)
                      ..++|.|+|++|.+.+..+. .|+ +|+.+++++++.+.+ +   ..+...   ..|..+.+ .+.+.+.+.. .+++|+
T Consensus         3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVTG   79 (275)
T ss_pred             CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCCE
Confidence            46788898999999888774 788 888888887665432 2   223321   23443322 1222232221 147999


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      ++++.|.
T Consensus        80 li~nAG~   86 (275)
T PRK06940         80 LVHTAGV   86 (275)
T ss_pred             EEECCCc
Confidence            9998874

>PLN02928 oxidoreductase family protein

Probab=93.07  E-value=1.1  Score=41.49  Aligned_cols=96  Identities=23%  Similarity=0.312  Sum_probs=57.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC-----CceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g-----~~~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      .|.++.|+|.|.+|..+++.++.+|. +|++.+++..+... ..++     ....++......++.+.+.     ..|+|
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~-----~aDiV  230 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAG-----EADIV  230 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHh-----hCCEE
Confidence            47899999999999999999999999 99999876332111 1110     0001100000001333332     26888


Q ss_pred             EeccCC-hHH----HHHHHHHhcCCCcEEEEEcc
Q 019414          231 VECTGN-IDN----MISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       231 ld~~g~-~~~----~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +.++.. +++    -...+..++++ ..++.++-
T Consensus       231 vl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR  263 (347)
T PLN02928        231 VLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR  263 (347)
T ss_pred             EECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence            877652 221    13567778886 77777763

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=93.03  E-value=1.3  Score=40.31  Aligned_cols=88  Identities=24%  Similarity=0.377  Sum_probs=59.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEE-ecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV-ECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vl-d~~  234 (341)
                      .|.++.|+|.|.+|++.+++++.+|. +|+.-+++.. .+..++.++.++-        +.+.+.     ..|++. .|-
T Consensus       145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~~--------l~ell~-----~sDii~l~~P  209 (324)
T COG1052         145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYVD--------LDELLA-----ESDIISLHCP  209 (324)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceecc--------HHHHHH-----hCCEEEEeCC
Confidence            48899999999999999999998898 8888887765 4444445554321        222222     267764 555


Q ss_pred             CChHHH----HHHHHHhcCCCcEEEEEcc
Q 019414          235 GNIDNM----ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       235 g~~~~~----~~~~~~l~~~~g~~v~~g~  259 (341)
                      .++++.    ...++.++++ +.+|-++-
T Consensus       210 lt~~T~hLin~~~l~~mk~g-a~lVNtaR  237 (324)
T COG1052         210 LTPETRHLINAEELAKMKPG-AILVNTAR  237 (324)
T ss_pred             CChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence            454432    2567778886 77777764

>PRK05855 short chain dehydrogenase; Validated

Probab=93.03  E-value=0.55  Score=46.30  Aligned_cols=79  Identities=23%  Similarity=0.278  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++-+...|+ +|+.++++.++.+.+    ++.|...   ..|..+.+ ...+.+.+...  +
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g  391 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDAD-AMEAFAEWVRAEHG  391 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence            4578999987 9999999888888999 788888888775543    2334321   23443322 12222322221  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus       392 ~id~lv~~Ag~  402 (582)
T PRK05855        392 VPDIVVNNAGI  402 (582)
T ss_pred             CCcEEEECCcc
Confidence            69999998874

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.02  E-value=0.75  Score=39.62  Aligned_cols=78  Identities=28%  Similarity=0.348  Sum_probs=45.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hHHH----HHHcCCce-ec--CCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~~----~~~~g~~~-vv--~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |.+|...+..+...|+ +|+++.++.. +.+.    ++..+... .+  |..+.+ .+.+.+.+...  +
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   82 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE-SVERAVDEAKAEFG   82 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            468999987 9999999999988899 6655555443 2221    22233322 22  333322 12222333222  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|.++.+.|.
T Consensus        83 ~id~vi~~ag~   93 (248)
T PRK05557         83 GVDILVNNAGI   93 (248)
T ss_pred             CCCEEEECCCc
Confidence            68999998763

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=93.01  E-value=0.33  Score=42.71  Aligned_cols=73  Identities=19%  Similarity=0.114  Sum_probs=49.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|||+|+.+-|...+..+...|. +|+++.+++.+.+.+.+.|...++.-. -+  -. .+.++..+ ++|+|+|++..
T Consensus         2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~-l~--~~-~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGA-LD--PQ-ELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECC-CC--HH-HHHHHHHhcCCCEEEEcCCH
Confidence            68999874459888877777897 888888888887777777654443221 11  22 24444444 89999998763

This enzyme was found to be a monomer by gel filtration.

>PRK03612 spermidine synthase; Provisional

Probab=93.00  E-value=0.85  Score=44.59  Aligned_cols=99  Identities=17%  Similarity=0.149  Sum_probs=61.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC-Cce----ecC-----CCCCChhHHHHHHHHhc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VTD----FVN-----TSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g-~~~----vv~-----~~~~~~~~~~~i~~~~~  224 (341)
                      ++.++||++|+| .|..+..+++.-+.++|++++.+++-.+.+++.. ...    ..+     ....|  ..+.+++ .+
T Consensus       296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~D--a~~~l~~-~~  371 (521)
T PRK03612        296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDD--AFNWLRK-LA  371 (521)
T ss_pred             CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEECh--HHHHHHh-CC
Confidence            456789999875 3556667777544469999999999999988721 100    010     01112  3333332 34


Q ss_pred             CCccEEE-eccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRSV-ECTGN----------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~vl-d~~g~----------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +++|+|+ |....          .+.++.+.+.|+|+ |.++...
T Consensus       372 ~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~  415 (521)
T PRK03612        372 EKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS  415 (521)
T ss_pred             CCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence            5899987 43211          13467888999998 9988754

>PRK08303 short chain dehydrogenase; Provisional

Probab=93.00  E-value=0.82  Score=41.35  Aligned_cols=34  Identities=32%  Similarity=0.330  Sum_probs=29.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      .+.++||+|+ +++|++.++.+...|+ +|+.++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            3678999987 8999999999988999 78888776

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=92.96  E-value=2.9  Score=36.92  Aligned_cols=102  Identities=20%  Similarity=0.298  Sum_probs=62.2

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHHhcC
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ...+++|++||=.|+|+ |..++.++...+ ...|++++.++++.+.++    .+|...+. ....+  .. .+.. ..+
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~-~~~~D--~~-~~~~-~~~  139 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVA-VTNFD--GR-VFGA-AVP  139 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEE-EecCC--HH-Hhhh-hcc
Confidence            34678999988887654 444555555543 238999999999977654    45654321 11112  11 1111 123


Q ss_pred             CccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          226 GVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       226 ~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .||.|| |  |+|.                         .+.+..+++.++++ |+++....
T Consensus       140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstc  200 (264)
T TIGR00446       140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTC  200 (264)
T ss_pred             CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence            599986 5  3432                         13667788899997 99986654

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=92.94  E-value=1  Score=32.16  Aligned_cols=35  Identities=31%  Similarity=0.490  Sum_probs=29.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  189 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~  189 (341)
                      -++.+++|+|.|.+|..+++.+...+..++...++
T Consensus        21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            35678999999999999999999886557777765

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>TIGR02415 23BDH acetoin reductases

Probab=92.94  E-value=0.68  Score=40.25  Aligned_cols=76  Identities=22%  Similarity=0.269  Sum_probs=47.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      +++|+|+ |++|...++.+...|+ +|+.+.+++++.+.    +++.+...   ..|..+.+ .+.+.+.+...  +++|
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKD-QVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCCCC
Confidence            5889987 9999999988888999 88888887665432    22334321   22333322 12222322221  2689


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus        80 ~vi~~ag~   87 (254)
T TIGR02415        80 VMVNNAGV   87 (254)
T ss_pred             EEEECCCc
Confidence            99998864

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.92  E-value=0.82  Score=40.11  Aligned_cols=78  Identities=17%  Similarity=0.315  Sum_probs=46.4

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHH-HHc-CCc---eecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKF-GVT---DFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~---~~~~~~-~~~-g~~---~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .+.++||+|+   +++|.+.++-+...|+ +|+.+.++.   ++.+.+ +++ +..   ...|..+.+ ...+.+.+...
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDE-EITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHH-HHHHHHHHHHH
Confidence            3678999986   5999998888888999 777776543   333332 333 211   123443332 13333333322


Q ss_pred             --CCccEEEeccC
Q 019414          225 --GGVDRSVECTG  235 (341)
Q Consensus       225 --~~~d~vld~~g  235 (341)
                        +++|+++++.|
T Consensus        84 ~~g~ld~lv~nag   96 (257)
T PRK08594         84 EVGVIHGVAHCIA   96 (257)
T ss_pred             hCCCccEEEECcc
Confidence              47999998876

>PRK07775 short chain dehydrogenase; Provisional

Probab=92.92  E-value=1.2  Score=39.47  Aligned_cols=78  Identities=21%  Similarity=0.273  Sum_probs=47.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-e--cCCCCCChhHHHHHHHHh--cCC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v--v~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      ..++||+|+ |.+|...++-+...|+ +|+++.++.++.+..    +..+... .  .|..+.+ .+.+.+....  -++
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   87 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD-SVKSFVAQAEEALGE   87 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHhcCC
Confidence            357899987 9999999988888899 788877776654332    2234322 1  2333221 1222222221  136


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|.+.|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>PRK14982 acyl-ACP reductase; Provisional

Probab=92.91  E-value=0.64  Score=42.60  Aligned_cols=93  Identities=20%  Similarity=0.265  Sum_probs=59.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~-~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .+.+|+|+|+ |.+|..+++.+. ..|..+++.+.+++++.+.+. +++...+.     +  +.    +.. ...|+|+.
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~-----~--l~----~~l-~~aDiVv~  221 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL-----S--LE----EAL-PEADIVVW  221 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH-----h--HH----HHH-ccCCEEEE
Confidence            5689999998 999999877775 457668999988887766543 33311111     0  22    211 24899999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +.+.++.+..--..+.+. -.++.++.+.
T Consensus       222 ~ts~~~~~~I~~~~l~~~-~~viDiAvPR  249 (340)
T PRK14982        222 VASMPKGVEIDPETLKKP-CLMIDGGYPK  249 (340)
T ss_pred             CCcCCcCCcCCHHHhCCC-eEEEEecCCC
Confidence            987654431112345665 7778887654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=92.91  E-value=0.83  Score=41.28  Aligned_cols=78  Identities=24%  Similarity=0.289  Sum_probs=46.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhH-H---HHHHcCCcee---cCCCCCC--hhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRF-E---EAKKFGVTDF---VNTSEHD--RPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-~~~-~---~~~~~g~~~v---v~~~~~~--~~~~~~i~~~~~  224 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.++++. ++. +   .+++.|....   .|..+.+  ..+.+.+.+  .
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~   87 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L   87 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence            3578999987 9999999888888899 777776542 222 2   2333343221   2332221  012222223  2


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus        88 g~iD~li~nAG~   99 (306)
T PRK07792         88 GGLDIVVNNAGI   99 (306)
T ss_pred             CCCCEEEECCCC
Confidence            479999998774

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	341
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		2e-79
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		4e-78
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		2e-63
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		2e-63
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		3e-63
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		3e-63
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		1e-62
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		3e-60
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		7e-60
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		1e-59
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		1e-59
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		2e-59
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		3e-59
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		3e-59
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		4e-59
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		7e-59
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-58
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-58
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-58
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		4e-58
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		6e-58
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		7e-58
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		2e-57
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		9e-57
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		4e-55
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		1e-51
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		2e-50
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		3e-50
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		1e-49
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		1e-49
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		1e-49
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		2e-15
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		4e-08
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		1e-07
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		1e-06
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		7e-06
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		7e-06
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		2e-05
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		7e-05
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		7e-05
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		8e-05
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		3e-04

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  292 bits (747), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 140/324 (43%), Positives = 195/324 (60%), Gaps = 2/324 (0%)
Query: 16  FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
           + + G+ P  LFP I GH                    HV+P +  EC +C+ C+S  +N
Sbjct: 51  YTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTN 110
Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           +C  +R     G+M+ D +SRFS+NG+P+ HF+GTSTFS+YTVVH   VAKI+P APLDK
Sbjct: 111 LCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDK 170
Query: 134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
           VC+L CGV TGLGA  N AK E                               +D  SK+
Sbjct: 171 VCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKK 230
Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           +E AKKFGV +FVN  +HD+PIQEVI ++T+GGVD S EC GN+  M +A EC H GWG 
Sbjct: 231 YETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGT 290
Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           +V+VGV +      T+P  ++  R  KGT FG +K RT +P +V+ YMNK+++++++ITH
Sbjct: 291 SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITH 350
Query: 314 RIPFSEINKAFEYMVKGEGLRCII 337
            +   EINKAF+ + +G  LRC++
Sbjct: 351 NLTLGEINKAFDLLHEGTCLRCVL 374

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  288 bits (736), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 197/326 (60%), Gaps = 2/326 (0%)
Query: 16  FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
           + + G+ P  LFP + GH                    HV+P +  EC +C+ C+S  +N
Sbjct: 69  YTWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTN 128
Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           +C  +R     GVM+ D +SRFSING+P+ HF+GTSTFS+YTVVH   VAKI+P+APL+K
Sbjct: 129 LCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEK 188
Query: 134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
           VC+L CGV TGLGA  N AK E                               +D  SK+
Sbjct: 189 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKK 248
Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           F+ AK FGVT+F+N  EH++PIQ+VI ++T+GGVD S EC GN+  M SA EC H GWG 
Sbjct: 249 FDRAKNFGVTEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 308
Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           +V+VGV +      T+P  ++  R  KGT FG +K R+ +PS+VD Y+ K+++++++ITH
Sbjct: 309 SVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITH 368
Query: 314 RIPFSEINKAFEYMVKGEGLRCIISM 339
            +  ++INKAF+ M  G+ LR ++ M
Sbjct: 369 NMTLADINKAFDLMHDGDCLRVVLDM 394

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  239 bits (609), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 185/326 (56%), Gaps = 3/326 (0%)
Query: 16  FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
           +   G  P   FP I GH                     V+P++  +CG+C+ C +  +N
Sbjct: 49  YTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTN 108
Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           +C  +R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDK
Sbjct: 109 LCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDK 167
Query: 134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
           VC+L CG+STG GA +N AK E                               VD +  +
Sbjct: 168 VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 227
Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           F  AK+FG T+ +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV
Sbjct: 228 FARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGV 287
Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           +V+VGV +      T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH
Sbjct: 288 SVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTH 347
Query: 314 RIPFSEINKAFEYMVKGEGLRCIISM 339
            + F EINKAFE M  G+ +R ++ +
Sbjct: 348 NLSFDEINKAFELMHSGKSIRTVVKI 373

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 185/326 (56%), Gaps = 3/326 (0%)
Query: 16  FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
           +   G  P   FP I GH                     V+P++  +CG+C+ C +  +N
Sbjct: 50  YTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTN 109
Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           +C  +R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDK
Sbjct: 110 LCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDK 168
Query: 134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
           VC+L CG+STG GA +N AK E                               VD +  +
Sbjct: 169 VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 228
Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           F  AK+FG T+ +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV
Sbjct: 229 FARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGV 288
Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           +V+VGV +      T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH
Sbjct: 289 SVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTH 348
Query: 314 RIPFSEINKAFEYMVKGEGLRCIISM 339
            + F EINKAFE M  G+ +R ++ +
Sbjct: 349 NLSFDEINKAFELMHSGKSIRTVVKI 374

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 185/326 (56%), Gaps = 3/326 (0%)
Query: 16  FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
           +   G  P   FP I GH                     V+P++  +CG+C+ C +  +N
Sbjct: 49  YTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTN 108
Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           +C  +R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDK
Sbjct: 109 LCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDK 167
Query: 134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
           VC+L CG+STG GA +N AK E                               VD +  +
Sbjct: 168 VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 227
Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           F  AK+FG T+ +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV
Sbjct: 228 FARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGV 287
Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           +V+VGV +      T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH
Sbjct: 288 SVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTH 347
Query: 314 RIPFSEINKAFEYMVKGEGLRCIISM 339
            + F EINKAFE M  G+ +R ++ +
Sbjct: 348 NLSFDEINKAFELMHSGKSIRTVVKI 373

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 185/326 (56%), Gaps = 3/326 (0%)
Query: 16  FGFQGQTP--LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSN 73
           +   G  P   FP I GH                     V+P++  +CG+C+ C +  +N
Sbjct: 50  YTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTN 109
Query: 74  MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 133
           +C  +R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDK
Sbjct: 110 LCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDK 168
Query: 134 VCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKR 193
           VC+L CG+STG GA +N AK E                               VD +  +
Sbjct: 169 VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 228
Query: 194 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 253
           F  AK+FG T+ +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV
Sbjct: 229 FARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGV 288
Query: 254 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           +V+VGV +      T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH
Sbjct: 289 SVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTH 348
Query: 314 RIPFSEINKAFEYMVKGEGLRCIISM 339
            + F EINKAFE M  G+ +R ++ +
Sbjct: 349 NLSFDEINKAFELMHSGKSIRTVVKI 374

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  236 bits (602), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 178/315 (56%), Gaps = 2/315 (0%)
Query: 25  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           FP + GH                     V+P+F  +CG+CR C+S  +N C     N   
Sbjct: 62  FPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESP 121
Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
            VM +  ++RF+  G  V  FLGTSTFS+YTVV+   VAKI+P APLD VC+L CGVSTG
Sbjct: 122 DVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTG 180
Query: 145 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 204
            GA +N AK E                               VD +  +FE+AK FG TD
Sbjct: 181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240
Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
           FVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E    GWGV+VLVG      
Sbjct: 241 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHD 300
Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
           V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K+++L++FITHR+P   +N A 
Sbjct: 301 V-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAI 359
Query: 325 EYMVKGEGLRCIISM 339
           + M  G+ +R ++S+
Sbjct: 360 DLMKHGKCIRTVLSL 374

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 121/317 (38%), Positives = 174/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  RF +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  227 bits (579), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 120/317 (37%), Positives = 174/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 120/317 (37%), Positives = 174/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 120/317 (37%), Positives = 174/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  226 bits (575), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/317 (37%), Positives = 174/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P++T +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  225 bits (574), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 119/317 (37%), Positives = 174/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P++T +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  225 bits (573), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 119/317 (37%), Positives = 173/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+ GVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  224 bits (572), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 119/317 (37%), Positives = 173/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+ GVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  224 bits (570), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 119/317 (37%), Positives = 173/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+ T +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP 
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  223 bits (567), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 116/317 (36%), Positives = 172/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C++  SN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLG 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 NPRGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ +NVAK                                 VD +  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 ASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  G+ +R +++
Sbjct: 357 EGFDLLHSGKSIRTVLT 373

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 116/317 (36%), Positives = 172/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C++  SN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLG 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 NPRGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ +NVAK                                 VD +  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 ASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  G+ +R +++
Sbjct: 357 EGFDLLHSGKSIRTVLT 373

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  223 bits (567), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 116/317 (36%), Positives = 172/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C++  SN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLG 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 NPRGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ +NVAK                                 VD +  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 ASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  G+ +R +++
Sbjct: 357 EGFDLLHSGKSIRTVLT 373

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  221 bits (563), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 118/317 (37%), Positives = 172/317 (54%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C+    N C    ++
Sbjct: 59  TPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 MPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK  +                              VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+V V  
Sbjct: 237 ATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  GE +R I++
Sbjct: 357 EGFDLLRSGESIRTILT 373

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  221 bits (562), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 115/314 (36%), Positives = 171/314 (54%), Gaps = 2/314 (0%)
Query: 25  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P I GH                     V+P+F  +CG C  C+    N+C L  ++  R
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC-LKNLSMPR 119
Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           G M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 GTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTG 178
Query: 145 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 204
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 179 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 238
Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 239 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQ 298
Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 299 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 358
Query: 325 EYMVKGEGLRCIIS 338
           + +  G+ +R I++
Sbjct: 359 DLLRSGKSIRTILT 372

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  220 bits (561), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 115/314 (36%), Positives = 171/314 (54%), Gaps = 2/314 (0%)
Query: 25  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P I GH                     V+P+F  +CG C  C+    N+C L  ++  R
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC-LKNLSMPR 119
Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           G M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 GTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTG 178
Query: 145 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 204
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 179 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 238
Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 239 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQ 298
Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 299 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 358
Query: 325 EYMVKGEGLRCIIS 338
           + +  G+ +R I++
Sbjct: 359 DLLRSGKSIRTILT 372

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  219 bits (558), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 115/317 (36%), Positives = 171/317 (53%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C++  SN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLG 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 NPRGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ +NVAK                                 VD +  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L  RT KG  +G +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 ASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  G+ +  +++
Sbjct: 357 EGFDLLHSGKSICTVLT 373

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  217 bits (552), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 113/317 (35%), Positives = 171/317 (53%), Gaps = 2/317 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+FT +CG CR C++  SN C    + 
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLG 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             RG  L DG  RF+ +G+P++HF+G STFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 NPRGT-LQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ + VAK                                 VD +  +F +AK+ G
Sbjct: 177 STGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L  RT KG  FG +K +  +P +V  +M K+  L+  IT+ +PF +IN
Sbjct: 297 DSQNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCIIS 338
           + F+ +  G+ +R +++
Sbjct: 357 EGFDLLRSGKSIRTVLT 373

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  211 bits (537), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 113/316 (35%), Positives = 168/316 (53%), Gaps = 2/316 (0%)
Query: 22  TPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 81
           TPL P I GH                     V+P+   +CG CR C++  SN C    ++
Sbjct: 59  TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVS 117
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
             +G  L DG SRF+   +P++HFLG STFS+YTVV    VAKI+  +PL+KVC++ CG 
Sbjct: 118 NPQGT-LQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGF 176
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG G+ +NVAK                                 VD +  +F +AK+ G
Sbjct: 177 STGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELG 236
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            T+ +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP 
Sbjct: 237 ATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPP 296
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P+ +L  RT KG   G +K +  +P +V  +M K+  L+  ITH +PF +IN
Sbjct: 297 DSQNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPFEKIN 356
Query: 322 KAFEYMVKGEGLRCII 337
           + F+ +  G+ +R I+
Sbjct: 357 EGFDLLHSGKSIRTIL 372

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  199 bits (507), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/316 (34%), Positives = 162/316 (51%), Gaps = 3/316 (0%)
Query: 25  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDL---LRIN 81
           FP I GH                     V+P++   C  C+ C S ++N+C     L+  
Sbjct: 64  FPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSP 123
Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 141
                ++ D  SRF+  G+PV HF GTSTFS+YTVV    +AKI+  A L++VC+L CG 
Sbjct: 124 ASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGF 183
Query: 142 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 201
           STG GA +N AK                                 +D +S++F +AK  G
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
            TD +N  +  +PIQEVI E+T GGVD +++C G  + M +A +C   GWG    +GV +
Sbjct: 244 ATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAA 303
Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                   P  ++  RT+ GTFFG +K    +P +V  Y NK+  L+  +TH +PF +I+
Sbjct: 304 GSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKIS 363
Query: 322 KAFEYMVKGEGLRCII 337
           +AF+ M +G+ +R I+
Sbjct: 364 EAFDLMNQGKSIRTIL 379

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 162/314 (51%), Gaps = 2/314 (0%)
Query: 25  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           FP I GH                     V+P+F  +C +C  CR+   N+C    I   R
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG-R 119
Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           GV LADG +RF+  G+PV+HFL TSTF+EYTVV    VAKI+  AP +KVC++ CG STG
Sbjct: 120 GV-LADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 145 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 204
            GA +   K +                               +D +  +FE+A   G T+
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
            ++  +  +PI EV++EMT   V  + E  G+++ MI A    H  +G +V+VGVP    
Sbjct: 239 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 298
Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
           +    P+ +   RT KG  FG  K R D+P +V  ++ K+ +L++ ITH +PF +I++ F
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGF 358
Query: 325 EYMVKGEGLRCIIS 338
           E +  G+ +R +++
Sbjct: 359 ELLNSGQSIRTVLT 372

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 162/314 (51%), Gaps = 2/314 (0%)
Query: 25  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           FP I GH                     V+P+F  +C +C  CR+   N+C    I   R
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG-R 119
Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           GV LADG +RF+  G+PV+HF+ TSTF+EYTVV    VAKI+  AP +KVC++ CG STG
Sbjct: 120 GV-LADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 145 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 204
            GA +   K +                               +D +  +FE+A   G T+
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
            ++  +  +PI EV++EMT   V  + E  G+++ MI A    H  +G +V+VGVP    
Sbjct: 239 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 298
Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
           +    P+ +   RT KG  FG  K R D+P +V  ++ K+ +L++ ITH +PF +I++ F
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPFKKISEGF 358
Query: 325 EYMVKGEGLRCIIS 338
           E +  G+ +R +++
Sbjct: 359 ELLNSGQSIRTVLT 372

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  193 bits (490), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/313 (35%), Positives = 167/313 (53%), Gaps = 3/313 (0%)
Query: 25  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           FP I GH                     V+P+F  +CG CR C+S  SN C+   +    
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121
Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           G+M AD  SRF+  G+P+ + +GTSTF+EYTVV    VAKI+P APL+  C++ CG +TG
Sbjct: 122 GLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATG 179
Query: 145 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 204
            GA +N AK                                 V     +F +A + G T+
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239
Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
            +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  + G GV V++G+ S + 
Sbjct: 240 CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE 299
Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
                P+ +L  R+LKG+ FG +K   ++  +VD YM K++ +   ++ ++   +INKAF
Sbjct: 300 RLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAF 358
Query: 325 EYMVKGEGLRCII 337
           E +  G+G+R I+
Sbjct: 359 ELLSSGQGVRSIM 371

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  193 bits (490), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 166/322 (51%), Gaps = 7/322 (2%)
Query: 21  QTPLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLR- 79
           +  LFP + GH                     V+P F  +C  C+ C S ++N+C  LR 
Sbjct: 57  KKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRN 116
Query: 80  --INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 137
                +   ++ D  SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++
Sbjct: 117 FKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLI 176
Query: 138 SCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEA 197
            CG S+G GA +N AK                                 +D + ++F +A
Sbjct: 177 GCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA 236
Query: 198 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257
           K  G TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +V
Sbjct: 237 KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296
Query: 258 GVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316
           G    +   MT P ++V+  R++ GTFFG +K    +P++V  Y NK+ +L+  +TH +P
Sbjct: 297 GAKVDE---MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALP 353
Query: 317 FSEINKAFEYMVKGEGLRCIIS 338
           F  IN A + M +G+ +R I++
Sbjct: 354 FESINDAIDLMKEGKSIRTILT 375

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  193 bits (490), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 165/319 (51%), Gaps = 7/319 (2%)
Query: 24  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLR---I 80
           LFP + GH                     V+P F  +C  C+ C S ++N+C  LR    
Sbjct: 60  LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKY 119
Query: 81  NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCG 140
             +   ++ D  SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG
Sbjct: 120 PTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCG 179
Query: 141 VSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKF 200
            S+G GA +N AK                                 +D + ++F +AK  
Sbjct: 180 FSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 239
Query: 201 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
           G TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG  
Sbjct: 240 GATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK 299
Query: 261 SKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319
             +   MT P ++V+  R++ GTFFG +K    +P++V  Y NK+ +L+  +TH +PF  
Sbjct: 300 VDE---MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFES 356
Query: 320 INKAFEYMVKGEGLRCIIS 338
           IN A + M +G+ +R I++
Sbjct: 357 INDAIDLMKEGKSIRTILT 375

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 124/321 (38%), Gaps = 15/321 (4%)
Query: 25  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P + GH                    HV+  + G CG C  C +     C         
Sbjct: 59  LPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFS 117
Query: 85  GVMLADGQSRFSI----NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCG 140
           G   AD +   ++     G   +HF   S+F+ Y +       K+    P++ +  L CG
Sbjct: 118 G---ADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCG 174
Query: 141 VSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKF 200
           + TG GA +N  K                                 VD    R E AK+ 
Sbjct: 175 IQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234
Query: 201 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
           G T  +N+   D P+   I E+T+GGV+ ++E TG+ + +    + +     +AV VG P
Sbjct: 235 GATHVINSKTQD-PV-AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAV-VGAP 291
Query: 261 S--KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318
                A F    + +L  +T+ G   G+  P+  +P +V +Y   +   ++ +     F 
Sbjct: 292 QLGTTAQFDVNDL-LLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKFY-AFD 349
Query: 319 EINKAFEYMVKGEGLRCIISM 339
           EIN+A     KG  L+ II +
Sbjct: 350 EINQAAIDSRKGITLKPIIKI 370

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 188 DRSSKRFEEAKKFGVTDFVNTSEHDRP--IQEVIAEMTNGGVDRSVECTGNIDNMISAFE 245
           D S+ R  +AK+ G  DF+    ++ P  I + +  +     + ++ECTG   ++ +   
Sbjct: 202 DLSASRLSKAKEVG-ADFILEISNESPEEIAKKVEGLLGSKPEVTIECTGVETSIQAGIY 260
Query: 246 CVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 305
             H G G  VLVG+ S+    MT  + +++  T +    G ++     P  + M  +K +
Sbjct: 261 ATHSG-GTLVLVGLGSE----MTS-VPLVHAATREVDIKGVFRYCNTWPMAISMLASKSV 314
Query: 306 ELEKFITHRIPFSEINKAFEYMVKGEGLRCII 337
            ++  +THR P  +  +AFE   KG GL+ +I
Sbjct: 315 NVKPLVTHRFPLEKALEAFETSKKGLGLKVMI 346

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 190 SSKRFEEAKKFGVTDFVN---TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 245
           S  R + A++ G    +N   TS  +R  ++ I ++T+G G D  +E TG+   ++   E
Sbjct: 229 SPNRLKLAEEIGADLTLNRRETSVEER--RKAIMDITHGRGADFILEATGDSRALLEGSE 286
Query: 246 CVHDGWGVAVL-VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 304
            +  G   +V  V VP     F      VL   T KG +  +        S+     N Q
Sbjct: 287 LLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR--NYQ 344
Query: 305 LELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 340
           L L K ITHR+P  E NKA E M   E L+ I+  E
Sbjct: 345 L-LSKLITHRLPLKEANKALELMESREALKVILYPE 379

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 188 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV----DRSVECTGNIDNMISA 243
           D S+ R  +AK+ G  D V     + P QE IA    G +    + ++ECTG   ++ + 
Sbjct: 203 DLSATRLSKAKEIG-ADLVLQISKESP-QE-IARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 244 FECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYM 301
                 G G  VLVG+ S+     T P+    + E  +KG F    +     P  + M  
Sbjct: 260 IYATRSG-GTLVLVGLGSE---MTTVPLLHAAIREVDIKGVF----RYCNTWPVAISMLA 311
Query: 302 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 337
           +K + ++  +THR P  +  +AFE   KG GL+ ++
Sbjct: 312 SKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIML 347

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 48/295 (16%)
Query: 54  LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSE 113
           +P     CG C +C S    +C+  +             + +S++G           ++E
Sbjct: 85  IPWLYSACGHCDYCLSGQETLCEHQK------------NAGYSVDG----------GYAE 122
Query: 114 YTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXX 172
           Y    +  V KI + L+  +   I   GV+T     +  AKP                  
Sbjct: 123 YCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQ 182
Query: 173 XXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN---GGVDR 229
                         VD   ++ E AK+ G    VN      P++E  A+      GGV  
Sbjct: 183 YAKAMGLNVVA---VDIGDEKLELAKELGADLVVN------PLKEDAAKFMKEKVGGVHA 233
Query: 230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNY 287
           +V    +     SA+  +  G G  VLVG+P ++   M  PI   VLN   + G+  G  
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE---MPIPIFDTVLNGIKIIGSIVGT- 288
Query: 288 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISMED 341
             R DL   +      ++   K I    P  +IN+ F+ M+KG+   R ++++ED
Sbjct: 289 --RKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDRMLKGQINGRVVLTLED 338

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 113/295 (38%), Gaps = 48/295 (16%)
Query: 54  LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSE 113
           +P     CG C +C S    +C+  +             + +S++G           ++E
Sbjct: 85  IPWLYSACGHCDYCLSGQETLCEHQK------------NAGYSVDG----------GYAE 122
Query: 114 YTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXXXXXXXXXXX 172
           Y    +  V KI + L+  +   I   GV+T     +  AKP                  
Sbjct: 123 YCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGFGHVAVQ 182
Query: 173 XXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN---GGVDR 229
                         VD   ++ E AK+ G    VN      P++E  A+      GGV  
Sbjct: 183 YAKAMGLNVVA---VDIGDEKLELAKELGADLVVN------PLKEDAAKFMKEKVGGVHA 233
Query: 230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNY 287
           +V    +     SA+  +  G G  VLVG+P ++   M  PI   VLN   + G+  G  
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE---MPIPIFDTVLNGIKIIGSIVGT- 288
Query: 288 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISMED 341
             R DL   +      ++   K I    P  +IN+ F+ M+KG+   R ++++ED
Sbjct: 289 --RKDLQEALQFAAEGKV---KTIIEVQPLEKINEVFDRMLKGQINGRVVLTLED 338

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 188 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV----DRSVECTGNIDNMISA 243
           D S+ R  +AK+ G  D V     + P QE IA    G +    + ++ECTG   ++ + 
Sbjct: 203 DLSATRLSKAKEIG-ADLVLQISKESP-QE-IARKVEGQLGCKPEVTIECTGAEASIQAG 259
Query: 244 FECVHDGWGVAVLVGVPSKDAVFMTKPI--NVLNERTLKGTFFGNYKPRTDLPSVVDMYM 301
                 G G  VLVG+ S+     T P+    + E  +KG F    +     P  +    
Sbjct: 260 IYATRSG-GTLVLVGLGSEX---TTVPLLHAAIREVDIKGVF----RYCNTWPVAISXLA 311
Query: 302 NKQLELEKFITHRIPFSEINKAFEYMVKGEGLR 334
           +K + ++  +THR P  +  +AFE   KG GL+
Sbjct: 312 SKSVNVKPLVTHRFPLEKALEAFETFKKGLGLK 344

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 195 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 253
           + AK +G TD VN    D PI+  I  +T G GVD ++   GN D M +A + V  G G 
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 254 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 310
              V    +  V     +     +  +T+KG      + R +   ++D+   K+++  K 
Sbjct: 262 IANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKL 319
Query: 311 ITHRI-PFSEINKAFEYM 327
           +TH    F  I KAF  M
Sbjct: 320 VTHVFRGFDNIEKAFMLM 337

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 188 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV 247
           D +  R   A+ +     VN  E D  + EV+  +T  GV+  +E +GN   +      +
Sbjct: 196 DPNPYRLAFARPY-ADRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMAL 252
Query: 248 HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG-TFFGNYKPR---TDLPSVVDMYMNK 303
             G G A ++G+PS    F     ++  E  ++G T FG    R   T +     +Y + 
Sbjct: 253 IPG-GEARILGIPSDPIRF-----DLAGELVMRGITAFGIAGRRLWQTWMQGTALVY-SG 305
Query: 304 QLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 337
           +++L   +THR+P S   +AF  +  G+ ++ I+
Sbjct: 306 RVDLSPLLTHRLPLSRYREAFGLLASGQAVKVIL 339

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 195 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 253
           + AK +G TD VN    D PI+  I  +T G GVD ++   GN D M +A + V  G G 
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 254 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 310
              V    +  V     +     +  +T+KG      + R +   ++D+   K+++  K 
Sbjct: 262 IANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPGGRLRME--RLIDLVFYKRVDPSKL 319
Query: 311 ITHRI-PFSEINKAFEYM 327
           +TH    F  I KAF  M
Sbjct: 320 VTHVFRGFDNIEKAFMLM 337

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 195 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 253
           + AK +G TD VN    D PI+  I  +T G GVD ++   GN D M +A + V  G G 
Sbjct: 205 DAAKYYGATDIVNYK--DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPG-GT 261
Query: 254 AVLVGVPSKDAVFMTKPINV---LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 310
              V    +  V     +     +  +T+KG      + R ++  + DM +  +++L K 
Sbjct: 262 IANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLRAEM--LRDMVVYNRVDLSKL 319
Query: 311 ITHRI-PFSEINKAFEYM 327
           +TH    F  I +A   M
Sbjct: 320 VTHVYHGFDHIEEALLLM 337

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	341
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	0.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	0.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	0.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	0.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	0.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-157
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-129
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	4e-69
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	2e-64
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-63
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-63
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	3e-63
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	4e-59
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	2e-58
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-58
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	2e-57
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	5e-54
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	2e-52
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	1e-51
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	9e-51
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	4e-50
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	6e-48
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	6e-45
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	5e-44
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-38
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	7e-38
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	9e-38
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	2e-26
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	5e-26
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-24
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	1e-23
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	2e-23
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	3e-23
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	3e-23
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	2e-22
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-22
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	6e-19
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	6e-18
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	2e-16
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-14
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	3e-12
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-10
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	6e-10
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-09
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-09
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	9e-09
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	9e-09
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	3e-08
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	3e-08
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	9e-08
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-07
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	3e-07
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	4e-07
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	4e-07
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-06
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-06
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	3e-04
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	6e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  541 bits (1395), Expect = 0.0
 Identities = 160/321 (49%), Positives = 221/321 (68%), Gaps = 1/321 (0%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
                 FP I GH  AG+VESVGEGV+ L+ GD V+P++  +CG+C+ C +  +N+C  +
Sbjct: 54  ADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKI 113

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
           R+   +G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L 
Sbjct: 114 RVTQGKGLMP-DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLG 172

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
           CG+STG GA +N AK E GS  AVFGLG VGLA   G ++AGASRIIGVD +  +F  AK
Sbjct: 173 CGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 258
           +FG T+ +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VG
Sbjct: 233 EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG 292

Query: 259 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS 318
           V +      T+P  ++  RT KGT FG +K    +P +V  YM+K++++++F+TH + F 
Sbjct: 293 VAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD 352

Query: 319 EINKAFEYMVKGEGLRCIISM 339
           EINKAFE M  G+ +R ++ +
Sbjct: 353 EINKAFELMHSGKSIRTVVKI 373

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  539 bits (1390), Expect = 0.0
 Identities = 149/313 (47%), Positives = 210/313 (67%), Gaps = 1/313 (0%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P I GHEAAG+VES+GEGV+ +  GD V+P+FT +CG CR C+    N C    ++  R
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           G M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 121 GTMQ-DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTG 179

Query: 145 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 204
            G+ + VAK  +GS+ AVFGLG VGL+   G + AGA+RIIGVD +  +F +AK+ G T+
Sbjct: 180 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 239

Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQ 299

Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
                P+ +L+ RT KG  FG +K +  +P +V  +M K+  L+  ITH +PF +IN+ F
Sbjct: 300 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGF 359

Query: 325 EYMVKGEGLRCII 337
           + +  GE +R I+
Sbjct: 360 DLLRSGESIRTIL 372

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  531 bits (1369), Expect = 0.0
 Identities = 158/320 (49%), Positives = 215/320 (67%), Gaps = 2/320 (0%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79
                FP + GHE AG+VESVG GV++ + G+ V+P+F  +CG+CR C+S  +N C    
Sbjct: 57  KHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGW 116

Query: 80  INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC 139
            N    VM    ++RF+  G  V  FLGTSTFS+YTVV+   VAKI+P APLD VC+L C
Sbjct: 117 ANESPDVMS-PKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGC 175

Query: 140 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 199
           GVSTG GA +N AK E GS+ AVFGLGAVGLAA  G   AGA RII VD +  +FE+AK 
Sbjct: 176 GVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235

Query: 200 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 259
           FG TDFVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E    GWGV+VLVG 
Sbjct: 236 FGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW 295

Query: 260 PSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE 319
                V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K+++L++FITHR+P   
Sbjct: 296 TDLHDV-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLES 354

Query: 320 INKAFEYMVKGEGLRCIISM 339
           +N A + M  G+ +R ++S+
Sbjct: 355 VNDAIDLMKHGKCIRTVLSL 374

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  531 bits (1369), Expect = 0.0
 Identities = 133/320 (41%), Positives = 202/320 (63%), Gaps = 5/320 (1%)

Query: 21  QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR- 79
           +  LFP + GHE AG+VESVG GV++ + GD V+P F  +C  C+ C S ++N+C  LR 
Sbjct: 57  KKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRN 116

Query: 80  --INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 137
                +   ++ D  SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++
Sbjct: 117 FKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLI 176

Query: 138 SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197
            CG S+G GA +N AK   GS+ AVFGLG VGL+A  G +IAGASRII +D + ++F +A
Sbjct: 177 GCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA 236

Query: 198 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257
           K  G TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +V
Sbjct: 237 KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVV 296

Query: 258 GVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317
           G    +       ++V+  R++ GTFFG +K    +P++V  Y NK+ +L+  +TH +PF
Sbjct: 297 GAKVDE--MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354

Query: 318 SEINKAFEYMVKGEGLRCII 337
             IN A + M +G+ +R I+
Sbjct: 355 ESINDAIDLMKEGKSIRTIL 374

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  523 bits (1350), Expect = 0.0
 Identities = 141/313 (45%), Positives = 205/313 (65%), Gaps = 3/313 (0%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
           FP I GHEA GVVES+G GV+ ++ GD V+P+F  +CG CR C+S  SN C+   +    
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 144
           G+M  D  SRF+  G+P+ + +GTSTF+EYTVV    VAKI+P APL+  C++ CG +TG
Sbjct: 122 GLMA-DMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATG 179

Query: 145 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 204
            GA +N AK   GS+ AVFGLG VG +A  G + AGASRIIGV     +F +A + G T+
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239

Query: 205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 264
            +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  + G GV V++G+ S + 
Sbjct: 240 CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE 299

Query: 265 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAF 324
                P+ +L  R+LKG+ FG +K   ++  +VD YM K++ +   ++ ++   +INKAF
Sbjct: 300 RLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAF 358

Query: 325 EYMVKGEGLRCII 337
           E +  G+G+R I+
Sbjct: 359 ELLSSGQGVRSIM 371

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  445 bits (1146), Expect = e-157
 Identities = 94/318 (29%), Positives = 153/318 (48%), Gaps = 9/318 (2%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P + GHE +G++E++G  V++L+VGDHV+  +   CG C  C +     C         
Sbjct: 59  LPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFS 117

Query: 85  GVMLADGQSRFSINGEPV--NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
           G    +G      + + V  +HF   S+F+ Y +       K+    P++ +  L CG+ 
Sbjct: 118 GADS-EGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQ 176

Query: 143 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 202
           TG GA +N  K    SS   +G GAVGL+A   A++ GAS II VD    R E AK+ G 
Sbjct: 177 TGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA 236

Query: 203 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 262
           T  +N+   D      I E+T+GGV+ ++E TG+ + +    + +    G   +VG P  
Sbjct: 237 THVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQL 293

Query: 263 DAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
                    ++L   +T+ G   G+  P+  +P +V +Y   +   ++ +     F EIN
Sbjct: 294 GTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEIN 352

Query: 322 KAFEYMVKGEGLRCIISM 339
           +A     KG  L+ II +
Sbjct: 353 QAAIDSRKGITLKPIIKI 370

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  373 bits (959), Expect = e-129
 Identities = 86/331 (25%), Positives = 130/331 (39%), Gaps = 29/331 (8%)

Query: 21  QTPLFPRIFGHEAAGVVESVGEGVSD-----LEVGDHVLPVFTGECGDCRHCRS-DVSNM 74
                P I GHE AG V  V     D     L+ GD ++      CG+C  C+      +
Sbjct: 67  PRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYL 126

Query: 75  CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDK 133
           C        +   +  G S +        H  G   +S + V+     V K++    LD 
Sbjct: 127 CP-----NRKVYGINRGCSEYP-------HLRGC--YSSHIVLDPETDVLKVSEKDDLDV 172

Query: 134 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 193
           + +  C  +T   A     +   G +V + G G +GL     AR  GA  +I +  S  R
Sbjct: 173 LAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNR 232

Query: 194 FEEAKKFGVTDFVNTSEHDR-PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGW 251
            + A++ G    +N  E      ++ I ++T+G G D  +E TG+   ++   E +  G 
Sbjct: 233 LKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG- 291

Query: 252 GVAVLVGVPSKDAVFMTKPINVLNERTLKG-TFFGNY-KPRTDLPSVVDMYMNKQLELEK 309
           G   + GV          P  V     LK  TF G +    +     V +       L K
Sbjct: 292 GFYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSK 348

Query: 310 FITHRIPFSEINKAFEYMVKGEGLRCIISME 340
            ITHR+P  E NKA E M   E L+ I+  E
Sbjct: 349 LITHRLPLKEANKALELMESREALKVILYPE 379

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  218 bits (558), Expect = 4e-69
 Identities = 68/311 (21%), Positives = 111/311 (35%), Gaps = 34/311 (10%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P   GHE  G V  +GEGV+   VGD V       CG C  C     N C        R
Sbjct: 56  LPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCT-------R 108

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVST 143
              L          G          + +EY +V S         L P+    +   G++ 
Sbjct: 109 AADLGITPPGLGSPG----------SMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTP 158

Query: 144 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 203
               +  +     GS+  V G+G +G    +  R   A+R+I VD    R   A++ G  
Sbjct: 159 YHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD 218

Query: 204 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 262
             V +        + I E+T G G     +  G    + +A + V    G   +VG+ + 
Sbjct: 219 AAVKSGAG---AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAG 274

Query: 263 DAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI 320
                 K     +    ++   ++G    R++L  VV +    +L++    T      E 
Sbjct: 275 A---HAKVGFFMIPFGASVVTPYWGT---RSELMEVVALARAGRLDI---HTETFTLDEG 325

Query: 321 NKAFEYMVKGE 331
             A+  + +G 
Sbjct: 326 PAAYRRLREGS 336

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  206 bits (527), Expect = 2e-64
 Identities = 69/325 (21%), Positives = 119/325 (36%), Gaps = 48/325 (14%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDL 77
                +P   GHE +G +++VG GV DL  GD V   P+    C  C  C     + C  
Sbjct: 48  NGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLP--CFTCPECLKGFYSQCAK 105

Query: 78  LRINPVRGVMLADGQSRFSINGEPVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLDKV 134
                                      F+G+     F+EY VV    V  +    P++  
Sbjct: 106 YD-------------------------FIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDG 140

Query: 135 CI---LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191
                ++ G+        ++A+     +V + G G +GL A + A   GA  +  +D SS
Sbjct: 141 AFIEPITVGL-----HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISS 195

Query: 192 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDG 250
           ++   AK FG     N+SE      ++ + +         +E  G    +  A E     
Sbjct: 196 EKLALAKSFGAMQTFNSSEMS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH 253

Query: 251 WGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTF--FGNYKPRTDLPSVVDMYMNKQLE 306
                LVG   +D    +      +  E T+ G++  + +  P  +  +   +   ++L 
Sbjct: 254 -AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLS 312

Query: 307 LEKFITHRIPFSEINKAFEYMVKGE 331
           LE  I HR  F    +A   + +  
Sbjct: 313 LEPLIAHRGSFESFAQAVRDIARNA 337

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  204 bits (521), Expect = 2e-63
 Identities = 82/327 (25%), Positives = 131/327 (40%), Gaps = 52/327 (15%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRIN 81
           P+I GHE AG V  +G GV  +EVGD+V    + E    CG C  CR    ++C   +  
Sbjct: 62  PQIMGHEVAGEVVEIGPGVEGIEVGDYV----SVETHIVCGKCYACRRGQYHVCQNTK-- 115

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCI-- 136
                                    G  T   F+EY VV +  + K     P +   +  
Sbjct: 116 -----------------------IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE 152

Query: 137 -LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 195
            L   V T L   +       G SV + G G +GL     A+ +GA  +I  + S  R E
Sbjct: 153 PLGNAVDTVLAGPI------SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRE 206

Query: 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVA 254
            AKK G    +N  E D  + + + ++T+G GVD  +E +G    +    + V    G  
Sbjct: 207 LAKKVGADYVINPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRV 263

Query: 255 VLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 314
            L+G+           + +    T+ G             +V  +  + +L L+  ITH+
Sbjct: 264 SLLGLYPGKVTIDFNNLIIFKALTIYGIT--GRHLWETWYTVSRLLQSGKLNLDPIITHK 321

Query: 315 IP-FSEINKAFEYMVKGEGLRCIISME 340
              F +  +AFE M  G+  + +  ++
Sbjct: 322 YKGFDKYEEAFELMRAGKTGKVVFMLK 348

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  204 bits (521), Expect = 2e-63
 Identities = 75/333 (22%), Positives = 130/333 (39%), Gaps = 52/333 (15%)

Query: 18  FQGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNM 74
             G+ P   P   GHE  G+V   G  V D+  G  +   P  +  CG C  C++   N+
Sbjct: 67  LHGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNIS--CGRCPQCQAGRVNL 124

Query: 75  CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPL 131
           C  LR                          +G      F+EY +V      +I      
Sbjct: 125 CRNLR-------------------------AIGIHRDGGFAEYVLVPRKQAFEIPLTLDP 159

Query: 132 DKVCI---LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 188
                   L+C +       ++++  + GS+VA+ G G +GL   + AR+AGA+ +I   
Sbjct: 160 VHGAFCEPLACCL-----HGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILST 214

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG---GVDRSVECTGNIDNMISAFE 245
           R + +   A++ G T  V+ S  D  + E IA        GVD  +EC G  + +  +  
Sbjct: 215 RQATKRRLAEEVGATATVDPSAGD--VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTR 272

Query: 246 CVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 304
               G G  V++GV  +      +P ++L  E  + G+F   +          D+     
Sbjct: 273 LAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPF----VHRRAADLVATGA 327

Query: 305 LELEKFITHRIPFSEINKAFEYMVKGEGLRCII 337
           +E+++ I+ RI   E             ++ ++
Sbjct: 328 IEIDRMISRRISLDEAPDVISNPAAAGEVKVLV 360

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  203 bits (519), Expect = 3e-63
 Identities = 82/322 (25%), Positives = 128/322 (39%), Gaps = 50/322 (15%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRIN 81
           P + GHE +GVVE+VG GV   +VGDHV    + E    C  C  CR+   ++C   +  
Sbjct: 58  PLVTGHEFSGVVEAVGPGVRRPQVGDHV----SLESHIVCHACPACRTGNYHVCLNTQ-- 111

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLDKVCI-- 136
                                   LG      F+EY VV +          P +   I  
Sbjct: 112 -----------------------ILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILE 148

Query: 137 -LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 195
                V      T+       G SV + G G +GL AA   R +GA  I+  D +  R  
Sbjct: 149 PFGNAV-----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLA 203

Query: 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV 255
            A+ +     VN  E D  + EV+  +T  GV+  +E +GN   +      +  G G A 
Sbjct: 204 FARPYA-DRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEAR 259

Query: 256 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI 315
           ++G+PS    F      V+   T  G      +          +  + +++L   +THR+
Sbjct: 260 ILGIPSDPIRFDLAGELVMRGITAFGIA--GRRLWQTWMQGTALVYSGRVDLSPLLTHRL 317

Query: 316 PFSEINKAFEYMVKGEGLRCII 337
           P S   +AF  +  G+ ++ I+
Sbjct: 318 PLSRYREAFGLLASGQAVKVIL 339

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  194 bits (495), Expect = 4e-59
 Identities = 67/338 (19%), Positives = 119/338 (35%), Gaps = 60/338 (17%)

Query: 25  FPRIFGHEAAGVVESVGEGVSD------LEVGDHVL--PVFTGECGDCRHCRSDVSNMCD 76
           FP   GHE +GVV   G    +       E+G+ V    +    CG CR C     N C+
Sbjct: 91  FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLW--CGHCRPCAEGFPNHCE 148

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLDK 133
            L                           LG +    F+EY  V +     +  L  + +
Sbjct: 149 NLN-------------------------ELGFNVDGAFAEYVKVDAKYAWSLRELEGVYE 183

Query: 134 VCI----------LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR 183
                         S   +      +       G +V + G G +GLAA    + AGAS+
Sbjct: 184 GDRLFLAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASK 240

Query: 184 IIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMIS 242
           +I  + S  R   AK+ G    ++ ++ +    E + + TNG G    +E TG    +  
Sbjct: 241 VILSEPSEVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWP 298

Query: 243 AFECV-HDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDM 299
             E V     G+   V + ++    +        +    + G+    +      P V+ +
Sbjct: 299 QIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQ--GHSGHGTFPRVISL 356

Query: 300 YMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 337
            M   +++ K I+  +   EI +  + +   + L  + 
Sbjct: 357 -MASGMDMTKIISKTVSMEEIPEYIKRLQTDKSLVKVT 393

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  191 bits (487), Expect = 2e-58
 Identities = 73/328 (22%), Positives = 127/328 (38%), Gaps = 54/328 (16%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRIN 81
           P + GHEA+G VE VG  V  L+ GD V      E      +   C+    N+   +   
Sbjct: 64  PMVLGHEASGTVEKVGSSVKHLKPGDRV----AIEPGAPRENDEFCKMGRYNLSPSIF-- 117

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LS 138
                   DG                      +   ++    K+      ++  +   LS
Sbjct: 118 -FCATPPDDG------------------NLCRFYKHNAAFCYKLPDNVTFEEGALIEPLS 158

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 198
            G+               G  V V G G +G+     A+  GA++++  D S+ R  +AK
Sbjct: 159 VGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK 213

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAV 255
           + G    +  S+     QE+  ++        + ++ECTG   ++ +       G G  V
Sbjct: 214 EIGADLVLQISKES--PQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLV 270

Query: 256 LVGVPSKDAVFMTKPIN--VLNERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKFIT 312
           LVG+ S+       P+    + E  +KG F + N       P  + M  +K + ++  +T
Sbjct: 271 LVGLGSEMTTV---PLLHAAIREVDIKGVFRYCN-----TWPVAISMLASKSVNVKPLVT 322

Query: 313 HRIPFSEINKAFEYMVKGEGLRCIISME 340
           HR P  +  +AFE   KG GL+ ++  +
Sbjct: 323 HRFPLEKALEAFETFKKGLGLKIMLKCD 350

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  190 bits (486), Expect = 4e-58
 Identities = 70/315 (22%), Positives = 127/315 (40%), Gaps = 41/315 (13%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
           P  P   GHE  G +E V EGV  LE GD V+       G C  CR+     C+ L    
Sbjct: 71  PKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF-- 128

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN---PLAPLDKVCILSC 139
                        +I+G           F+E+       V K+        L ++  L+ 
Sbjct: 129 ----------PGLNIDG----------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLAD 168

Query: 140 GVSTGLGATLNVAKP--ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197
              T   A +  A      G+ VA+ G+G +G  A +  ++   + +I +D   ++ + A
Sbjct: 169 AGITAYRA-VKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLA 227

Query: 198 KKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 256
           ++ G    V+      P+++V+ E+T G GV+ +++  G+   +      +    G  ++
Sbjct: 228 ERLGADHVVDARRD--PVKQVM-ELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLII 283

Query: 257 VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP 316
           VG   +          + +E + +G+  GN     +L  +V + +  ++ +E        
Sbjct: 284 VGYGGELRFPT--IRVISSEVSFEGSLVGN---YVELHELVTLALQGKVRVE---VDIHK 335

Query: 317 FSEINKAFEYMVKGE 331
             EIN   E + KGE
Sbjct: 336 LDEINDVLERLEKGE 350

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  188 bits (481), Expect = 2e-57
 Identities = 70/319 (21%), Positives = 113/319 (35%), Gaps = 51/319 (15%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRIN 81
             + GHE+AG V +V   V  ++VGD V      E    C  C  C +   N C+ +   
Sbjct: 73  DHVLGHESAGEVIAVHPSVKSIKVGDRV----AIEPQVICNACEPCLTGRYNGCERVD-- 126

Query: 82  PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSC 139
                    G                      Y    +    KI  ++  +   +  LS 
Sbjct: 127 -FLSTPPVPG------------------LLRRYVNHPAVWCHKIGNMSYENGAMLEPLSV 167

Query: 140 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 199
            +     A L  A    G  V + G G +GL     A+ AGA  ++  D    R + AK+
Sbjct: 168 AL-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE 222

Query: 200 FGVTDFVNTSEHDRP--IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 256
                  +  E        + I E   G     ++ECTG   ++ +A   V  G G   +
Sbjct: 223 ICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFV 281

Query: 257 VGVPSKDAVFMTKPIN--VLNERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           +GV   +      P     + E  L+  + + N       P  + +  N  ++L + +TH
Sbjct: 282 IGVGKNEIQI---PFMRASVREVDLQFQYRYCN-----TWPRAIRLVENGLVDLTRLVTH 333

Query: 314 RIPFSEINKAFEYMVKGEG 332
           R P  +  KAFE     + 
Sbjct: 334 RFPLEDALKAFETASDPKT 352

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  180 bits (458), Expect = 5e-54
 Identities = 75/317 (23%), Positives = 116/317 (36%), Gaps = 48/317 (15%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
             I GHEA G V  VG  V D + GD V+             +         +       
Sbjct: 54  NMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGM------- 106

Query: 86  VMLADGQSRFS--INGEPVNHFLGTSTFSEYTVVH---SGCVAKINPLAPLDKVCILSCG 140
                   +FS   +G           F E+  V+         +    PL+   ++   
Sbjct: 107 ----LAGWKFSNVKDG----------VFGEFFHVNDADMNLA-HLPKEIPLEAAVMIPDM 151

Query: 141 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 200
           ++TG       A  + G +V V G+G VGL +  GA   GA RI  V       + A ++
Sbjct: 152 MTTGFHGAEL-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210

Query: 201 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 259
           G TD +N    D  I E I + T+G GVD+ V   G++     A + +  G      V  
Sbjct: 211 GATDIINYKNGD--IVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNY 267

Query: 260 PSKDAVFMTKPINVLNERTLKGTFFGNYK--------PRTDLPSVVDMYMNKQLELEKFI 311
                    +  N+   R+  G   G+           R  +  ++D+   K+++  K +
Sbjct: 268 LG-------EGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLV 320

Query: 312 THRIP-FSEINKAFEYM 327
           TH    F  I KAF  M
Sbjct: 321 THVFRGFDNIEKAFMLM 337

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  175 bits (447), Expect = 2e-52
 Identities = 73/322 (22%), Positives = 120/322 (37%), Gaps = 57/322 (17%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           P + GHEA+G V  VG+ V  L+ GD V   P     C  C+ C+    N+C  L     
Sbjct: 61  PMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVP--CRRCQFCKEGKYNLCPDLT---- 114

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTS----TFSEYTVVHSGCVAKINPLAPLDK-VCI-- 136
                                F  T       + Y V  +    K+     L++   +  
Sbjct: 115 ---------------------FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEP 153

Query: 137 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 196
           LS GV          A  + G++V V G G +GL +   A+  GA  ++   RS +R E 
Sbjct: 154 LSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEV 207

Query: 197 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG---GVDRSVECTGNIDNMISAFECVHDGWGV 253
           AK  G    +           +I  + +      + +++C+GN   +         G G 
Sbjct: 208 AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GT 266

Query: 254 AVLVGVPSKDAVFMTKPIN--VLNERTLKGTF-FGNYKPRTDLPSVVDMYMNKQLELEKF 310
            +LVG+ S+       P+      E  +K  F + N     D P  ++M  + +  +++ 
Sbjct: 267 LMLVGMGSQMVTV---PLVNACAREIDIKSVFRYCN-----DYPIALEMVASGRCNVKQL 318

Query: 311 ITHRIPFSEINKAFEYMVKGEG 332
           +TH     +   AFE   K   
Sbjct: 319 VTHSFKLEQTVDAFEAARKKAD 340

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  173 bits (441), Expect = 1e-51
 Identities = 69/310 (22%), Positives = 121/310 (39%), Gaps = 32/310 (10%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
              P   GHE AG +E VG+ V     GD V        G+C +CR    ++CD  R   
Sbjct: 60  VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
                        + +G           ++EY +V               +   L+C   
Sbjct: 120 ------------INFDG----------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGI 157

Query: 143 TGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
           T   A +  A  +   ++ V G  G +G  A + A+    + IIGVD   +  E AK+ G
Sbjct: 158 TTYRA-VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAG 216

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 261
               +N S  D P+ E+     + GVD  ++   +   +    + +    G  V+VG+  
Sbjct: 217 ADYVINASMQD-PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFG 274

Query: 262 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEIN 321
            D  +    I  L+E    G+  GN   ++D   ++ +   +  +++  IT  +   E N
Sbjct: 275 ADLHYHAPLI-TLSEIQFVGSLVGN---QSDFLGIMRLA--EAGKVKPMITKTMKLEEAN 328

Query: 322 KAFEYMVKGE 331
           +A + +   +
Sbjct: 329 EAIDNLENFK 338

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  171 bits (436), Expect = 9e-51
 Identities = 57/334 (17%), Positives = 100/334 (29%), Gaps = 49/334 (14%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
                + GHEA GVVE    G S    GD V+PV    CG CR+C     + C+      
Sbjct: 58  GKDFLVLGHEAIGVVEESYHGFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFG- 113

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCG 140
             G+   DG                     E+       + KI        +    L+  
Sbjct: 114 EAGIHKMDG------------------FMREWWYDDPKYLVKIPKSIEDIGILAQPLADI 155

Query: 141 V---------STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 191
                        +              V V G G +G+      R  G    +   R  
Sbjct: 156 EKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREP 215

Query: 192 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG-NIDNMISAFECVHDG 250
              E+            S +     + + +   G  D  ++ TG +++ + +    +   
Sbjct: 216 TEVEQTVIEETKTNYYNSSNG---YDKLKDSV-GKFDVIIDATGADVNILGNVIPLLGRN 271

Query: 251 WGVAVLVGVPSKDAV-FMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE- 306
            GV  L G  +  +V    K +   V   +T+ G   G    +      V    + +   
Sbjct: 272 -GVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLY 327

Query: 307 ---LEKFITHRIPFSEINKAFEYMVKGEGLRCII 337
               +  IT  +  ++  +  + + + E     I
Sbjct: 328 PKAAKMLITKTVSINDEKELLKVLREKEHGEIKI 361

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  169 bits (431), Expect = 4e-50
 Identities = 64/314 (20%), Positives = 105/314 (33%), Gaps = 43/314 (13%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPV 83
             + GHEA GVV  V    ++LE GD V+         G   +   D  +M         
Sbjct: 58  HLVLGHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFER 115

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGV 141
             V    G                    SE+       + +I          I  +S   
Sbjct: 116 GIVGA-HG------------------YMSEFFTSPEKYLVRIPRSQAELGFLIEPISITE 156

Query: 142 -STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARI--AGASRIIGV---DRSSKRFE 195
            +         A     SS  V G G++GL      ++   G   +  +   DR     +
Sbjct: 157 KALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID 216

Query: 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV 255
             ++   T +V++ +      E + ++    +D   E TG   + I + + +    GV  
Sbjct: 217 IIEELDAT-YVDSRQTP---VEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPN-GVGA 270

Query: 256 LVGVPSKDAVFMTKPIN----VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 311
           L+GVPS  A  +         VL+ + L G+   N        + V      +  LE  +
Sbjct: 271 LLGVPSDWAFEVDAGAFHREMVLHNKALVGSV--NSHVEHFEAATVTFTKLPKWFLEDLV 328

Query: 312 THRIPFSEINKAFE 325
           T   P SE   AF+
Sbjct: 329 TGVHPLSEFEAAFD 342

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  163 bits (416), Expect = 6e-48
 Identities = 70/314 (22%), Positives = 125/314 (39%), Gaps = 40/314 (12%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
              P I GHE AG +  VGE ++ ++ GD+V+   T     CR+CR    N+C    I  
Sbjct: 57  FRLPIILGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIP- 114

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
             G          + NG           FSEY +V S             +   L+   +
Sbjct: 115 --G---------QTTNG----------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGT 153

Query: 143 TGLGA---TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAK 198
           T +GA    L          V V G+G + +   +  +    +  I+G+ RS K  + A 
Sbjct: 154 TSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFAL 213

Query: 199 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257
           + G        +     + +I ++T+G G   +++  G  +   +  + +    G  +LV
Sbjct: 214 ELGADYVSEMKD----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILV 268

Query: 258 GVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF 317
           G+  K           +  + L G+ +G+     DL  VV +  + +++       ++P 
Sbjct: 269 GMEGKRVSLEAFDT-AVWNKKLLGSNYGS---LNDLEDVVRLSESGKIKP---YIIKVPL 321

Query: 318 SEINKAFEYMVKGE 331
            +INKAF  + +G 
Sbjct: 322 DDINKAFTNLDEGR 335

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  157 bits (399), Expect = 6e-45
 Identities = 68/353 (19%), Positives = 128/353 (36%), Gaps = 48/353 (13%)

Query: 18  FQGQTPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
           ++G+  +    + GHE  G V   G  V  +++GD V   F   CG CR+C+   S++C+
Sbjct: 52  YRGRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCE 111

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV---HSGCVA---KINPLAP 130
              +NP   +            G  +  + G    +EY +V       +    K   +  
Sbjct: 112 NNLVNPDADL---------GAFGFDLKGWSGGQ--AEYVLVPYADYMLLKFGDKEQAMEK 160

Query: 131 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190
           +  + ++S  + TG    ++ A  + GS V + G G VG  AA GAR+ GA+ +I  D++
Sbjct: 161 IKDLTLISDILPTGFHGCVS-AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQN 219

Query: 191 SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG-------------- 235
            +R +     G    ++      P+++ I ++     VD  V+  G              
Sbjct: 220 PERLKLLSDAGFET-IDLRNSA-PLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTET 277

Query: 236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLK-GTFF--------GN 286
               + S F+ V  G  + +  G+                   L  G  +        G 
Sbjct: 278 PNGALNSLFDVVRAGGAIGI-PGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGM 336

Query: 287 YKPRTDLPSVVDMYMNKQLEL--EKFITHRIPFSEINKAFEYMVKGEGLRCII 337
                    + +  +  Q+    +      I   +    +    KG   + +I
Sbjct: 337 APVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVI 389

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  154 bits (392), Expect = 5e-44
 Identities = 72/354 (20%), Positives = 124/354 (35%), Gaps = 51/354 (14%)

Query: 18  FQGQTPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
            +G+T      + GHE  G V   G  V +L++GD V   F   CG CR C+   + +C 
Sbjct: 53  VRGRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCL 112

Query: 77  LLRINPVRGVMLADGQSRF-SINGEPVNHFLGTSTFSEYTVV---HSGCVA---KINPLA 129
              +NP R      G        G            +EY +V       +    +   + 
Sbjct: 113 --TVNPARAGGAY-GYVDMGDWTG----------GQAEYVLVPYADFNLLKLPDRDKAME 159

Query: 130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 189
            +  +  LS  + TG    +  A    GS+V V G G VGLAAA  AR+ GA+ +I  D 
Sbjct: 160 KIRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDL 218

Query: 190 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG------------- 235
           +  R   AK  G     + S    P+ E IA +     VD +V+  G             
Sbjct: 219 NPARLAHAKAQGFEI-ADLSLDT-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKH 276

Query: 236 --NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLK-GTFF-------- 284
                 + S  +       + +  G+   +          +   +++ G  +        
Sbjct: 277 EAPATVLNSLMQVTRVAGKIGI-PGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHT 335

Query: 285 GNYKPRTDLPSVVDMYMNKQLELEK-FITHRIPFSEINKAFEYMVKGEGLRCII 337
           G         +++   M  ++ + +      I   +  + +     G   + +I
Sbjct: 336 GQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVI 389

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  138 bits (350), Expect = 2e-38
 Identities = 79/317 (24%), Positives = 121/317 (38%), Gaps = 44/317 (13%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLL 78
              P  P I GHE  G V +VG GVS ++ GD V +P     CG C HC      +C+  
Sbjct: 52  PVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQ 111

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
           +             + +S+NG           + EY V     V  +       ++  + 
Sbjct: 112 QN------------TGYSVNG----------GYGEYVVADPNYVGLLPDKVGFVEIAPIL 149

Query: 139 C-GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197
           C GV T     L V     G  V + G+G +G  A + AR  G  R+  VD    +   A
Sbjct: 150 CAGV-TVYKG-LKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLA 206

Query: 198 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 257
           ++ G    VN  + D P   +  E+  GG    +    +      A   V  G G   L 
Sbjct: 207 RRLGAEVAVNARDTD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALN 262

Query: 258 GVPSKDA---VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR 314
           G+P  D    +F      VL   T++G+  G    R+DL   +D   +  +   K     
Sbjct: 263 GLPPGDFGTPIFDV----VLKGITIRGSIVGT---RSDLQESLDFAAHGDV---KATVST 312

Query: 315 IPFSEINKAFEYMVKGE 331
               ++N  F  + +G+
Sbjct: 313 AKLDDVNDVFGRLREGK 329

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  137 bits (347), Expect = 7e-38
 Identities = 93/333 (27%), Positives = 146/333 (43%), Gaps = 55/333 (16%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLL 78
              P  P I GHE  G+VE VG GV+ L+VGD V +P     CG C +C S    +C+  
Sbjct: 50  PVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQ 109

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
           +             + +S++G           ++EY    +  V KI      ++   + 
Sbjct: 110 KN------------AGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIF 147

Query: 139 C-GVSTGLGATLNVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSK 192
           C GV+T     L V   + G  VA++G+G     AV  A A G        ++ VD   +
Sbjct: 148 CAGVTTYKA--LKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL------NVVAVDIGDE 199

Query: 193 RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG 252
           + E AK+ G    VN  + D    + + E   GGV  +V    +     SA+  +  G G
Sbjct: 200 KLELAKELGADLVVNPLKED--AAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-G 255

Query: 253 VAVLVGVPSKD---AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEK 309
             VLVG+P ++    +F T    VLN   + G+  G    R DL   +      ++   K
Sbjct: 256 ACVLVGLPPEEMPIPIFDT----VLNGIKIIGSIVGT---RKDLQEALQFAAEGKV---K 305

Query: 310 FITHRIPFSEINKAFEYMVKGEGL-RCIISMED 341
            I    P  +IN+ F+ M+KG+   R ++++ED
Sbjct: 306 TIIEVQPLEKINEVFDRMLKGQINGRVVLTLED 338

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  136 bits (346), Expect = 9e-38
 Identities = 69/320 (21%), Positives = 122/320 (38%), Gaps = 46/320 (14%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLL 78
                 P + GHE AGVV  +GE V   ++GD+  +    G C  C +C     + C   
Sbjct: 55  PLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHA 114

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
            +            S ++ +G          +F +Y    +   A I     L +V  + 
Sbjct: 115 DL------------SGYTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPIL 152

Query: 139 C-GVSTGLGATLNVAKPERGSSVAVFGLG------AVGLAAAEGARIAGASRIIGVDRSS 191
           C G++      L  A    G  VA+ G        AV  A A G R+      +G+D   
Sbjct: 153 CAGITVYKA--LKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRV------LGIDGGE 204

Query: 192 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW 251
            + E  +  G   F++ ++    +  V+   T+GG    +  + +   + ++   V    
Sbjct: 205 GKEELFRSIGGEVFIDFTKEKDIVGAVLKA-TDGGAHGVINVSVSEAAIEASTRYVRAN- 262

Query: 252 GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI 311
           G  VLVG+P+           V+   ++ G++ GN   R D    +D +    +   K  
Sbjct: 263 GTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGN---RADTREALDFFARGLV---KSP 316

Query: 312 THRIPFSEINKAFEYMVKGE 331
              +  S + + +E M KG+
Sbjct: 317 IKVVGLSTLPEIYEKMEKGQ 336

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  107 bits (269), Expect = 2e-26
 Identities = 50/334 (14%), Positives = 101/334 (30%), Gaps = 49/334 (14%)

Query: 17  GFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
           G+  +      + G + +GVV   G GV   + GDHV+ V      +          +  
Sbjct: 101 GWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQEPATHGDGMLGT 159

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI 136
             R     G     G                    +EY VV +  +         ++  +
Sbjct: 160 EQRA---WGFETNFG------------------GLAEYGVVRASQLLPKPAHLTWEEAAV 198

Query: 137 LSCGVSTGLGA--TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR 193
                 T      +   A+ ++G  V ++G  G +G  A +  +  G    + V  S+++
Sbjct: 199 SPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQK 257

Query: 194 FEEAKKFGVTDFVNTSEHD----------------RPIQEVIAEMTNGGVDRSVECTGNI 237
               +  G    +N +E                  R + +++ E      D   E TG  
Sbjct: 258 EAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR- 316

Query: 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVV 297
                +      G G  V  G  S            +  + + G+   N     +  +  
Sbjct: 317 VTFGLSVIVARRG-GTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATN 372

Query: 298 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 331
            ++ +  +     ++   P +E  +A   +    
Sbjct: 373 RLFESGAVVPA--MSAVYPLAEAAEACRVVQTSR 404

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  105 bits (264), Expect = 5e-26
 Identities = 70/317 (22%), Positives = 111/317 (35%), Gaps = 40/317 (12%)

Query: 17  GFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
              G    FP +   + +GVVE+VG+ V+    GD V+  F     D     +  +   +
Sbjct: 75  TGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYE 134

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI 136
            L                    G       G    SEY V+  G            +   
Sbjct: 135 TL--------------------GGAHP---G--VLSEYVVLPEGWFVAAPKSLDAAEAST 169

Query: 137 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 196
           L C   T   A +       G  V V G G V L   + A+  GA  +I    S ++ + 
Sbjct: 170 LPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDR 228

Query: 197 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAV 255
           A   G    +N  E D    E +  +T   G D  +E  G    +  + + V    G   
Sbjct: 229 AFALGADHGINRLEED--WVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRIS 284

Query: 256 LVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH 313
           ++GV     V  + P+  L      ++G   G    R  L  +V      +L L+  I  
Sbjct: 285 VIGVLEGFEV--SGPVGPLLLKSPVVQGISVG---HRRALEDLVGAV--DRLGLKPVIDM 337

Query: 314 RIPFSEINKAFEYMVKG 330
           R  F+E+ +A  ++ +G
Sbjct: 338 RYKFTEVPEALAHLDRG 354

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  101 bits (254), Expect = 3e-24
 Identities = 51/336 (15%), Positives = 100/336 (29%), Gaps = 53/336 (15%)

Query: 17  GFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
               +  L   + G + AGVV   G GV+  + GD V+        +     +D     +
Sbjct: 109 DLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPE 168

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI 136
                 + G     G                    +E  +V S  +         ++   
Sbjct: 169 ----QRIWGFETNFG------------------GLAEIALVKSNQLMPKPDHLSWEEAAA 206

Query: 137 LSCGVSTGLGA--TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR 193
                ST      + N A  ++G +V ++G  G +G  A + A   GA   I V  S ++
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQK 265

Query: 194 FEEAKKFGVTDFVNTSEHDRPIQ---------------EVIAEMTNG-GVDRSVECTGNI 237
            E  +  G    ++ +                      + I E+T G  +D   E  G  
Sbjct: 266 AEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR- 324

Query: 238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPS 295
           +   ++      G G        S            L  + + + G+ F N     +   
Sbjct: 325 ETFGASVFVTRKG-GTITTCASTSGYMH--EYDNRYLWMSLKRIIGSHFAN---YREAWE 378

Query: 296 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 331
              +    +  +   ++      +  +A   + +  
Sbjct: 379 ANRLI--AKGRIHPTLSKVYSLEDTGQAAYDVHRNL 412

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 98.8 bits (247), Expect = 1e-23
 Identities = 80/337 (23%), Positives = 125/337 (37%), Gaps = 90/337 (26%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           +P + GHE  G V  VG  VS   VGD V +    G CG C  C  D+   C        
Sbjct: 63  YPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCP------- 115

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCG 140
           + +        +S N   +N   G  T   F++ TVVH   V KI     +++   L C 
Sbjct: 116 KKI--------WSYNDVYIN---GQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCA 164

Query: 141 VSTGLGATL-------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVD 188
                G T+        + +P  G    + GLG      V +A A G  +   S      
Sbjct: 165 -----GVTVYSPLSHFGLKQP--GLRGGILGLGGVGHMGVKIAKAMGHHVTVISS----- 212

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
            + KR E  +  G  D+V  S+          +M+        E   ++D +I      H
Sbjct: 213 SNKKREEALQDLGADDYVIGSDQA--------KMS--------ELADSLDYVIDTVPVHH 256

Query: 249 DGW----------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVD 298
                        G  +L+GV +    F+T  + +L  + + G+F G+      +    +
Sbjct: 257 A-LEPYLSLLKLDGKLILMGVINNPLQFLTPLL-MLGRKVITGSFIGS------MKETEE 308

Query: 299 MYMNKQLEL--EKFITH---RIPFSEINKAFEYMVKG 330
           M     LE   EK ++     +    +N AFE + K 
Sbjct: 309 M-----LEFCKEKGLSSIIEVVKMDYVNTAFERLEKN 340

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score = 98.0 bits (245), Expect = 2e-23
 Identities = 63/321 (19%), Positives = 114/321 (35%), Gaps = 42/321 (13%)

Query: 17  GFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 76
           G        P + G + +GVV++VG GV     GD V+      CG C  C +   N+C 
Sbjct: 49  GVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCP 108

Query: 77  LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI 136
                            R+ I GE  +   G  T++EY V+    +A        ++   
Sbjct: 109 -----------------RYQILGEHRH---G--TYAEYVVLPEANLAPKPKNLSFEEAAA 146

Query: 137 LSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFE 195
           +     T     ++      G  V V      V +AA + A++ GA R+I    S  +  
Sbjct: 147 IPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLR 205

Query: 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVA 254
            AK  G  + VN +  D    + +  +T G G D+ V+ TG         +   +G G  
Sbjct: 206 RAKALGADETVNYTHPD--WPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANG-GRI 261

Query: 255 VLVGVPSKDAVFMTKPINV----LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKF 310
            + G  S         +        + ++ G+       ++ L  ++      +L+    
Sbjct: 262 AIAGASSGYEG----TLPFAHVFYRQLSILGSTMA---SKSRLFPILRFVEEGKLKP--V 312

Query: 311 ITHRIPFSEINKAFEYMVKGE 331
           +   +P     +    + +  
Sbjct: 313 VGQVLPLEAAAEGHRLLEERR 333

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 98.1 bits (245), Expect = 3e-23
 Identities = 77/337 (22%), Positives = 113/337 (33%), Gaps = 89/337 (26%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           +P + GHE  G V +VG+ V     GD V +      C  C  C   + N CD       
Sbjct: 76  YPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCD------- 128

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKI-NPLAPLDKVCILSC 139
                       + N           T   +S+  VVH   V +I +P   L  V  L C
Sbjct: 129 --------HMTGTYNS--PTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLC 178

Query: 140 GVSTGLGATL------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVD 188
                 G T         A P  G  V V G+G      + LA A GA +   +      
Sbjct: 179 A-----GITTYSPLRHWQAGP--GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT------ 225

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
            S  + E AK  G  + VN+   D        EM             + D +++     H
Sbjct: 226 TSEAKREAAKALGADEVVNSRNAD--------EMA--------AHLKSFDFILNTVAAPH 269

Query: 249 DGW----------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVD 298
           +            G   LVG P+           ++  R + G+  G       +P   +
Sbjct: 270 N-LDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG------IPETQE 322

Query: 299 MYMNKQLEL--EKFITH---RIPFSEINKAFEYMVKG 330
           M     L+   E  I      I   +IN+A+E M++G
Sbjct: 323 M-----LDFCAEHGIVADIEMIRADQINEAYERMLRG 354

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 98.0 bits (245), Expect = 3e-23
 Identities = 72/337 (21%), Positives = 115/337 (34%), Gaps = 90/337 (26%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           +P + GHE  G V  VG  V  + VGD V +    G C  C  C +D+ N C        
Sbjct: 70  YPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCP------- 122

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCG 140
                   +   +      +   GT T   +S + V +   + +     PLD    L C 
Sbjct: 123 --------KMILTYASIYHD---GTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCA 171

Query: 141 VSTGLGATL-------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVD 188
                G T+        + +P  G  + + GLG     AV  A A G+++   S      
Sbjct: 172 -----GITVYSPLKYFGLDEP--GKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST----- 219

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
             SK+ E  K FG   F+ + + +        +M            G +D +I     VH
Sbjct: 220 SPSKKEEALKNFGADSFLVSRDQE--------QMQ--------AAAGTLDGIIDTVSAVH 263

Query: 249 DGW----------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVD 298
                        G  +LVG P K        + +   + + G+  G       +    +
Sbjct: 264 P-LLPLFGLLKSHGKLILVGAPEKPLELPAFSL-IAGRKIVAGSGIGG------MKETQE 315

Query: 299 MYMNKQLEL--EKFITH---RIPFSEINKAFEYMVKG 330
           M     ++   +  IT     I    +N A E + K 
Sbjct: 316 M-----IDFAAKHNITADIEVISTDYLNTAMERLAKN 347

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 95.4 bits (238), Expect = 2e-22
 Identities = 60/327 (18%), Positives = 100/327 (30%), Gaps = 72/327 (22%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 79
           G  P  P + G+E    V +VG  V+ L+ GD V+P   G                    
Sbjct: 79  GLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAG-------------------- 118

Query: 80  INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC 139
                                     LGT  +    V     + ++    PL     L  
Sbjct: 119 --------------------------LGT--WRTEAVFSEEALIQVPSDIPLQSAATLGV 150

Query: 140 GVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-- 196
              T     ++  + + G SV        VG A  + A   G  R I V R     ++  
Sbjct: 151 NPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLS 209

Query: 197 --AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 253
              K  G    +   E  RP  E+     +      ++ C G   +       +  G G 
Sbjct: 210 DRLKSLGAEHVITEEELRRP--EMKNFFKDMPQPRLALNCVGG-KSSTELLRQLARG-GT 265

Query: 254 AVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTD-------LPSVVDMYMNKQ 304
            V  G  +K  V     +++L   +  L+G +   +K           + ++ D+    Q
Sbjct: 266 MVTYGGMAKQPV--VASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQ 323

Query: 305 LELEKFITHRIPFSEINKAFEYMVKGE 331
           L        ++P  +   A E  +K  
Sbjct: 324 LTAP--ACSQVPLQDYQSALEASMKPF 348

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 95.0 bits (237), Expect = 2e-22
 Identities = 70/337 (20%), Positives = 116/337 (34%), Gaps = 92/337 (27%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPV 83
           +P I GHE AG+++ VG+GV   ++GD V +  F   C  C+ C+      C        
Sbjct: 58  YPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT------- 110

Query: 84  RGVMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCG 140
                   +  F+ +     H         +S   VV    V  ++  APL+KV  L C 
Sbjct: 111 --------KVVFTYDCLDSFH-DNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA 161

Query: 141 VSTGLGATL------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDR 189
                G T       +      G+ V V G G     AV  A A GA ++  +R      
Sbjct: 162 -----GITTYSPLKFSKVTK--GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFAR-----N 209

Query: 190 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 249
             K+ ++A   GV  F    +                     +C   +D +IS     +D
Sbjct: 210 EHKK-QDALSMGVKHFYTDPK---------------------QCKEELDFIISTIPTHYD 247

Query: 250 ---------GWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRTDLPSVVD 298
                      G   LVG+P  +   +    + +    R + G+  G       +    +
Sbjct: 248 LKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG------IKETQE 301

Query: 299 MYMNKQLEL--EKFIT---HRIPFSEINKAFEYMVKG 330
           M     ++   +  I      I   +I+ A+  +  G
Sbjct: 302 M-----VDFSIKHNIYPEIDLILGKDIDTAYHNLTHG 333

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 85.3 bits (212), Expect = 6e-19
 Identities = 73/340 (21%), Positives = 115/340 (33%), Gaps = 92/340 (27%)

Query: 25  FPRIFGHEAAGVVESVGEGV-SDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINP 82
            P + GHE  G V  +G    S L+VG  V +      C +C  C++D    C       
Sbjct: 62  MPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT------ 115

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSC 139
            + V         + +    +   G  +   ++ Y  VH   V  I    P      L C
Sbjct: 116 -KFV--------TTYSQPYED---GYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLC 163

Query: 140 GVSTGLGATL------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVD 188
           G     G T+      N   P  G  V + GLG        ++ A GA     SR     
Sbjct: 164 G-----GLTVYSPLVRNGCGP--GKKVGIVGLGGIGSMGTLISKAMGAETYVISR----- 211

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
            S KR E+A K G   ++ T E          +          +     D ++     + 
Sbjct: 212 SSRKR-EDAMKMGADHYIATLEE--------GDWGE-------KYFDTFDLIVVCASSLT 255

Query: 249 DGW-----------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVV 297
           D             G  V + +P +  +   KP   L   ++  +  G+      +  + 
Sbjct: 256 DIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGS------IKELN 308

Query: 298 DMYMNKQLEL--EKFITH---RIPFSE--INKAFEYMVKG 330
            +     L+L  EK I      +P  E  +++AFE M KG
Sbjct: 309 QL-----LKLVSEKDIKIWVETLPVGEAGVHEAFERMEKG 343

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 82.8 bits (205), Expect = 6e-18
 Identities = 55/342 (16%), Positives = 93/342 (27%), Gaps = 86/342 (25%)

Query: 16  FGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC 75
                 T       G+E    V  VG  VS LE GD V+P                    
Sbjct: 63  KTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG-------------- 108

Query: 76  DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC 135
                                             T+  + + +     K+ P     K  
Sbjct: 109 ----------------------------------TWRTHALGNDDDFIKL-PNPAQSKAN 133

Query: 136 ILSCGVSTGLGATLNV------------AKPERGSSVAVF--GLGAVGLAAAEGARIAGA 181
               G++   GAT++V             K   G    +   G  AVG  A++  ++   
Sbjct: 134 GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF 193

Query: 182 SRIIGVDRSSKRFEE----AKKFGVTDFVNTSEHD-RPIQEVIAEMTN---GGVDRSVEC 233
              I V R     +E     K+ G T  +   +++ R     I E      G    ++ C
Sbjct: 194 -NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNC 252

Query: 234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKPRT 291
            G   +       +++  G+ +  G  S   V  T P ++      T  G +        
Sbjct: 253 VGG-KSSTGIARKLNNN-GLMLTYGGMSFQPV--TIPTSLYIFKNFTSAGFWVTELLKNN 308

Query: 292 ------DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYM 327
                  L  ++  Y   +L      +    +       E  
Sbjct: 309 KELKTSTLNQIIAWYEEGKLTDA--KSIETLYDGTKPLHELY 348

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 78.2 bits (193), Expect = 2e-16
 Identities = 66/344 (19%), Positives = 104/344 (30%), Gaps = 80/344 (23%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           +GQ        G + AG V +VG  V+ ++VGD V        G                
Sbjct: 56  RGQFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRV-------YGAQNEMCPR-------- 100

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
              P +G                         FS+YTV      AKI      ++   L 
Sbjct: 101 --TPDQG------------------------AFSQYTVTRGRVWAKIPKGLSFEQAAALP 134

Query: 139 CGVST----------GLGATLNVAKPERGSSVAVF---GLGAVGLAAAEGARIAGASRII 185
            G+ST           L +      P     V V    G  A      +  R++G   I 
Sbjct: 135 AGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIA 194

Query: 186 GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFE 245
               S   F+ AK  G  +  +       + + I   T   +  +++C  N+++    F 
Sbjct: 195 TC--SPHNFDLAKSRGAEEVFDY--RAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFA 250

Query: 246 CVHDGWG-VAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG---NYKPRTDLPSVVDM-- 299
            +    G    L   P   A        V  + TL  T FG    +      P   +   
Sbjct: 251 AIGRAGGHYVSLNPFPEHAA----TRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQ 306

Query: 300 -------YMNKQLELEKFITHRIP-----FSEINKAFEYMVKGE 331
                     + +E  + + H +      F  I +  E + KGE
Sbjct: 307 FGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGE 350

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 55/314 (17%), Positives = 97/314 (30%), Gaps = 65/314 (20%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
              P I G+E  G+VE+VG  VS   +G  VLP                           
Sbjct: 60  IPLPNIPGYEGVGIVENVGAFVSRELIGKRVLP--------------------------- 92

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
                                   G  T+ EY    +  V  I           +     
Sbjct: 93  ----------------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPL 130

Query: 143 TGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
           T           +R   + V     A+G   A+ ++I    R+I V R++K  EE  + G
Sbjct: 131 TAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLG 189

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
               ++TS       E + E+TNG G D +++  G   +       +    G  + +G+ 
Sbjct: 190 AAYVIDTSTAPLY--ETVMELTNGIGADAAIDSIGG-PDGNELAFSLRPN-GHFLTIGLL 245

Query: 261 SKDAVFMTKPINVLNERTLKGTFFGNYKPRTD-------LPSVVDMYMNKQLELEKFITH 313
           S         I    +         ++               ++ +  N+QL   K +  
Sbjct: 246 SG-IQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHS 303

Query: 314 RIPFSEINKAFEYM 327
               +++  A + +
Sbjct: 304 TYELADVKAAVDVV 317

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 61/341 (17%), Positives = 102/341 (29%), Gaps = 92/341 (26%)

Query: 8   SFNP-----RNFVFGFQGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC 61
           S NP     RN       +     P   G++ +G V  +G  V+++ +GD V        
Sbjct: 44  SLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKV-------M 96

Query: 62  GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC 121
           G                                                ++EY       
Sbjct: 97  GI--------------------------------------AGFPDHPCCYAEYVCASPDT 118

Query: 122 VAKI--N---------PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVG 169
           + +             P A L           T L A LN A+ ++G  V +    G VG
Sbjct: 119 IIQKLEKLSFLQAASLPTAGL-----------TALQA-LNQAEVKQGDVVLIHAGAGGVG 166

Query: 170 LAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 229
             A + A+  G   +I    S +     K  G    +N  E D           +  VD 
Sbjct: 167 HLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHEED------FLLAISTPVDA 218

Query: 230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 289
            ++  G  D  I + +C+ +  G  V V   +       + I V  ++  +         
Sbjct: 219 VIDLVGG-DVGIQSIDCLKET-GCIVSVPTITAG-----RVIEVAKQKHRRAFGLLKQFN 271

Query: 290 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG 330
             +L  +  +    +L +E  I+     SE   A E +  G
Sbjct: 272 IEELHYLGKLVSEDKLRIE--ISRIFQLSEAVTAHELLETG 310

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 63/315 (20%), Positives = 97/315 (30%), Gaps = 71/315 (22%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
              P + G E AGVV S  EG S ++ GD V                             
Sbjct: 76  MEPPFVPGIETAGVVRSAPEG-SGIKPGDRV-------MA-------------------- 107

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
                                 F     ++E   V    +    P     +   L     
Sbjct: 108 ----------------------FNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYH 145

Query: 143 TGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 201
           T   A     +   G +V V G  G +G AA + A+  GA ++I V   +   E  K  G
Sbjct: 146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVG 204

Query: 202 VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 260
               +   E      + + E T G GVD  V+  G       A   +    G  ++VG  
Sbjct: 205 ADIVLPLEEGWA---KAVREATGGAGVDMVVDPIGG-PAFDDAVRTLASE-GRLLVVGFA 259

Query: 261 SKDAVFMTKPINVLNER--TLKGTFFGNY---KP---RTDLPSVVDMYMNKQLELEKFIT 312
           +      T  +N L  R  +L G  +G +              +  +       +   ++
Sbjct: 260 AGGIP--TIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG---MRPPVS 314

Query: 313 HRIPFSEINKAFEYM 327
            RIP SE  +A +  
Sbjct: 315 ARIPLSEGRQALQDF 329

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 58.8 bits (143), Expect = 6e-10
 Identities = 37/318 (11%), Positives = 88/318 (27%), Gaps = 65/318 (20%)

Query: 20  GQTPLFPRIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
           GQ  +  R  G E  G + + G+   +   VG  V                         
Sbjct: 74  GQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRV------------------------- 108

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 138
                   +   G                  +++EY V  +     +      +    + 
Sbjct: 109 ---AFATGLSNWG------------------SWAEYAVAEAAACIPLLDTVRDEDGAAMI 147

Query: 139 CGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197
               T +    ++ K E   +  +      +       A+  G  R I   R  ++    
Sbjct: 148 VNPLTAIAM-FDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALL 205

Query: 198 KKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 256
           K  G    +N    D   +  + E+         ++         + F  +       ++
Sbjct: 206 KDIGAAHVLNEKAPD--FEATLREVMKAEQPRIFLDAVTG-PLASAIFNAMPKR-ARWII 261

Query: 257 VGVPSKDAVFMTKPINVLNER-TLKGTFFGNYKPRT------DLPSVVDMYMNKQLELEK 309
            G    DA  + +P  ++ +   ++G +   +  +        +      + + +   + 
Sbjct: 262 YGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTD- 320

Query: 310 FITHRIPFSEINKAFEYM 327
            +T  +P +E   A+   
Sbjct: 321 -VTAVVPLAEA-IAWVPA 336

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 40/333 (12%), Positives = 80/333 (24%), Gaps = 108/333 (32%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
              + G + AGV+  VG  V    +G  V                               
Sbjct: 58  NGHVPGVDGAGVIVKVGAKVDSKMLGRRVA------------------------------ 87

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA---------PLDKVC 135
                   +    +G          +F+E+TV+++  V  + P           P     
Sbjct: 88  ------YHTSLKRHG----------SFAEFTVLNTDRVMTL-PDNLSFERAAALPC---- 126

Query: 136 ILSCGVSTGLGA--TLNVAKPERGSSVAVFGLGAVG-----LAAAEGARIAGASRIIGVD 188
                    L A          +   V + G GAV      +    G  +   S      
Sbjct: 127 -------PLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS------ 173

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
            +S     A K GV   +        + +              +   +  N  +    + 
Sbjct: 174 -ASLSQALAAKRGV-RHLY--REPSQVTQ--------KYFAIFDAVNS-QNAAALVPSLK 220

Query: 249 DGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMN-KQL- 305
               +  +            T+ I      +      G      D      +    + L 
Sbjct: 221 ANGHIICIQDRIPAPIDPAFTRTI------SYHEIALGALHDFGDRQDWQILMQQGEALL 274

Query: 306 ------ELEKFITHRIPFSEINKAFEYMVKGEG 332
                 ++E        F ++ +A ++  + + 
Sbjct: 275 TLIAQGKMEIAAPDIFRFEQMIEALDHSEQTKL 307

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 51/284 (17%), Positives = 90/284 (31%), Gaps = 85/284 (29%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
           PL P   G + AGV+E+VG+  S  + GD V                             
Sbjct: 85  PLLPYTPGSDVAGVIEAVGDNASAFKKGDRV--------------------FTSS----- 119

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
                                    +  ++EY +     V K+               + 
Sbjct: 120 -----------------------TISGGYAEYALAADHTVYKLPE------------KLD 144

Query: 143 TGLGATL---------NV---AKPERGSSVAVFGLGA--VGLAAAEGARIAGASRIIGVD 188
              GA +          +   A  + G SV V G  +  VGLAA + AR  G  +I+G  
Sbjct: 145 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHG-ASGGVGLAACQIARAYGL-KILGTA 202

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECV 247
            + +  +   + G  +  N  E +    + I +     G+D  +E   N  N+      +
Sbjct: 203 GTEEGQKIVLQNGAHEVFNHREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLL 259

Query: 248 HDGWGVAVLVGVPSKDAVFMTKPINVLNER-TLKGTFFGNYKPR 290
             G G  ++VG      +    P + + +  ++ G    +    
Sbjct: 260 SHG-GRVIVVGSRGTIEIN---PRDTMAKESSIIGVTLFSSTKE 299

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 55.4 bits (134), Expect = 9e-09
 Identities = 58/345 (16%), Positives = 103/345 (29%), Gaps = 78/345 (22%)

Query: 8   SFNP--RNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVS-DLEVGDHVLPVFTGECGDC 64
             N    N+  G    +   P   G E  G V ++G   S    VG  V           
Sbjct: 64  GVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVA---------- 113

Query: 65  RHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK 124
                                                   ++   +F+EYTVV +     
Sbjct: 114 ----------------------------------------YMAPGSFAEYTVVPASIATP 133

Query: 125 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASR 183
           + P    + + +L  G  T   +   +     G  V V    G  G  A + ++ A    
Sbjct: 134 V-PSVKPEYLTLLVSGT-TAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-H 190

Query: 184 IIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISA 243
           +IG   S ++    K  G    +N       +  V+ +    GVD   E  G       A
Sbjct: 191 VIGTCSSDEKSAFLKSLGCDRPINYKTEP--VGTVLKQEYPEGVDVVYESVGG-AMFDLA 247

Query: 244 FECVHDGWGVAVLVG--------VPSKDAVFMTKPINVLNER-TLKGTFFGNYKPRTD-- 292
            + +    G  +++G                 T P  +L +  +++G F  +Y  +    
Sbjct: 248 VDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAA 306

Query: 293 LPSVVDMYMNKQL------ELEKFITHRIPFSEINKAFEYMVKGE 331
           +  +++M ++  L                    I +A  YM  G+
Sbjct: 307 MSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGK 351

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 55.0 bits (133), Expect = 9e-09
 Identities = 47/290 (16%), Positives = 86/290 (29%), Gaps = 78/290 (26%)

Query: 21  QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 80
                 ++ G++AAG+V +VG  V+    GD V                           
Sbjct: 77  PDGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVF-------------------------- 110

Query: 81  NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-----------NPLA 129
               G ++  G                  T +E+ +V    V +             PL 
Sbjct: 111 --YAGSIIRPG------------------TNAEFHLVDERIVGRKPKTLDWAEAAALPLT 150

Query: 130 PLDKVCILSCGVST---GLGATLNVAKPERGSSVAVFGLGA---VGLAAAEGARIAGASR 183
            +           T        L+V KP  G++ A+  +G    VG  A + AR      
Sbjct: 151 SI-----------TAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLT 199

Query: 184 IIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISA 243
           +I      +  E  K  G    ++   H +P+   +A +  G        T    +    
Sbjct: 200 VIATASRPETQEWVKSLGAHHVID---HSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEI 256

Query: 244 FECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTD 292
            + +       ++    + D  +F  K +++ +E       FG       
Sbjct: 257 ADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQ 306

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 53.8 bits (129), Expect = 3e-08
 Identities = 27/241 (11%), Positives = 58/241 (24%), Gaps = 77/241 (31%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
                  G+E AGVV   G   +   +    +                            
Sbjct: 88  LDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA-------------------------- 121

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
                                  +G + +S+Y  + +     +              G +
Sbjct: 122 -----------------------IGGAMYSQYRCIPADQCLVLPE------------GAT 146

Query: 143 TGLGATLNV-----------AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS 190
              GA+  V            + E  S++        +G    +     G  +++ + R 
Sbjct: 147 PADGASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRK 205

Query: 191 SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHD 249
            ++ +  K  G     N +       + + E     G   + + TG          C+  
Sbjct: 206 QEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEA 263

Query: 250 G 250
            
Sbjct: 264 A 264

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 57/344 (16%), Positives = 94/344 (27%), Gaps = 101/344 (29%)

Query: 19  QGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 78
                  PR+ G +A GVVESVG  V+    GD V                         
Sbjct: 53  LMDVSKAPRVLGFDAIGVVESVGNEVTMFNQGDIVY------------------------ 88

Query: 79  RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI--N---------P 127
                 G    +G                  + +EY +++   VAK   N         P
Sbjct: 89  ----YSGSPDQNG------------------SNAEYQLINERLVAKAPKNISAEQAVSLP 126

Query: 128 LAPLDKVCILSCGVST---GLGATLNVAKPER---GSSVAVFGLGA--VG-----LAAAE 174
           L  +           T    L     +++      G ++ +   GA  VG     +A A 
Sbjct: 127 LTGI-----------TAYETLFDVFGISRNRNENEGKTLLIIN-GAGGVGSIATQIAKAY 174

Query: 175 GAR-IAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 233
           G R I  ASR       ++  E  KK G    +N   H   +           VD     
Sbjct: 175 GLRVITTASR-------NETIEWTKKMGADIVLN---HKESLLNQFKTQGIELVDYVFCT 224

Query: 234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPRT 291
                      + V     +A +V   +   +     K ++  +E               
Sbjct: 225 FNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIK 284

Query: 292 D---LPSVVDMYMNKQLE--LEKFITHRIPFSEINKAFEYMVKG 330
               L  + +       +    K +   +    I +A + +   
Sbjct: 285 HHEYLEDITNKVEQNIYQPTTTK-VIEGLTTENIYQAHQILESN 327

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 52.4 bits (126), Expect = 9e-08
 Identities = 55/351 (15%), Positives = 90/351 (25%), Gaps = 93/351 (26%)

Query: 9   FNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCR 68
            N +      + +   FP   G + +GVV   G  V   + GD V               
Sbjct: 78  LNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVW-------------- 123

Query: 69  SDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI--N 126
                                         G          T SE+ VV    V+    +
Sbjct: 124 ----------------------AAVPPWKQG----------TLSEFVVVSGNEVSHKPKS 151

Query: 127 ---------PLAPLDKVCILSCGVSTGLGATLNVAK----PERGSSVAVFG-LGAVGLAA 172
                    P   L           T   A   V         G  V + G  G VG  A
Sbjct: 152 LTHTQAASLPYVAL-----------TAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFA 200

Query: 173 AEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 232
            +  +   A  +  V  S    E  +K G  D ++       ++E +  +     D  ++
Sbjct: 201 IQVMKAWDA-HVTAVC-SQDASELVRKLGADDVIDYKSGS--VEEQLKSL--KPFDFILD 254

Query: 233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTD 292
             G       A + +    G   +  V           I     +T         K    
Sbjct: 255 NVGG-STETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWK 313

Query: 293 LPSVVDMYMN---KQLE-----LEK-----FITHRIPFSEINKAFEYMVKG 330
                  +       L+     ++       I    PFS++ +AF  + +G
Sbjct: 314 GVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERG 364

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 64/342 (18%), Positives = 101/342 (29%), Gaps = 109/342 (31%)

Query: 19  QGQTPL----FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 74
            G+ P      P I G + AG V +VG  V    VGD V        G            
Sbjct: 53  AGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSFRVGDAV-------FGL----------- 94

Query: 75  CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI--------- 125
                     GV    G                  T +++  V +  +A           
Sbjct: 95  --------TGGVGGLQG------------------THAQFAAVDARLLASKPAALTMRQA 128

Query: 126 --NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGA--VGLAAAEGARIAGA 181
              PL  +           T     ++ A+ + G +V + G G   VG  A + A   GA
Sbjct: 129 SVLPLVFI-----------TAWEGLVDRAQVQDGQTVLIQG-GGGGVGHVAIQIALARGA 176

Query: 182 SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNM 240
            R+    R S   E  +  G T    + E +    +  AE T G G D   +  G    +
Sbjct: 177 -RVFATARGSDL-EYVRDLGATPIDASREPE----DYAAEHTAGQGFDLVYDTLGG-PVL 229

Query: 241 ISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 299
            ++F  V     V   +G  +   A    K        T  G F       T    + + 
Sbjct: 230 DASFSAVKRFGHVVSCLGWGTHKLAPLSFKQA------TYSGVF-------TLHTLLANE 276

Query: 300 YMNKQLELEKFITHRI--------------PFSEINKAFEYM 327
            +    E+ +     +                +EI  A++ +
Sbjct: 277 GLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAV 318

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 16/33 (48%), Positives = 20/33 (60%)

Query: 21 QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 53
            P  P   G E AGVVE+VG+ V+  +VGD V
Sbjct: 53 PAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRV 85

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 39/208 (18%), Positives = 57/208 (27%), Gaps = 63/208 (30%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 85
               G E AGVV   G GV+ L  GD V+ +                             
Sbjct: 265 VASLGSEGAGVVVETGPGVTGLAPGDRVMGMIPK-------------------------- 298

Query: 86  VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 145
                                    F    V     V +I       +   +     T  
Sbjct: 299 ------------------------AFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAY 334

Query: 146 GATLNVAKPERGSSVAV-FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 204
            A +++A    G S+ V    G VG+AA + AR  GA  +       K     +   ++ 
Sbjct: 335 YALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASEDKW----QAVELSR 389

Query: 205 ---FVNTSEHDRPIQEVIAEMTNG-GVD 228
                  S      ++     T G GVD
Sbjct: 390 EHLA---SSRTCDFEQQFLGATGGRGVD 414

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 21 QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 53
            P  P   G EAAG+V  VG GV  ++ GD V
Sbjct: 53 PPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRV 85

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 14/29 (48%), Positives = 20/29 (68%)

Query: 25 FPRIFGHEAAGVVESVGEGVSDLEVGDHV 53
           P + G EA+G V + G+GV++ EVGD V
Sbjct: 63 KPYVLGREASGTVVAKGKGVTNFEVGDQV 91

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 16/29 (55%), Positives = 19/29 (65%)

Query: 25 FPRIFGHEAAGVVESVGEGVSDLEVGDHV 53
           P + G EAA VVE VG GV+D  VG+ V
Sbjct: 60 PPIVVGFEAAAVVEEVGPGVTDFTVGERV 88

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 53/338 (15%), Positives = 92/338 (27%), Gaps = 99/338 (29%)

Query: 23  PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 82
           P  P + G E +G+VE++G+ V                                      
Sbjct: 58  PKTPLVPGFECSGIVEALGDSV-------------------------------------- 79

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 142
                       + I G+ V  F+  + ++E        V KI               +S
Sbjct: 80  ----------KGYEI-GDRVMAFVNYNAWAEVVCTPVEFVYKIPD------------DMS 116

Query: 143 TGLGATL------------NVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDR 189
               A               VA    G SV V    G VG A A+         + G   
Sbjct: 117 FSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS 176

Query: 190 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD------------RSVECTGNI 237
           + K   EA K  VT   + +       + +  ++  GVD            + +     +
Sbjct: 177 TFKH--EAIKDSVTHLFDRNADYV---QEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPL 231

Query: 238 DNMIS-AFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER-TLKGTFFGNYKPRTDLPS 295
              I      +  G   +      S   V    PI +  E   + G    N   +     
Sbjct: 232 GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAG 291

Query: 296 VVDMYMNKQLELEK------FITHRIPFSEINKAFEYM 327
           ++   + K + L         +       E+ +A + +
Sbjct: 292 LIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRI 329

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 5e-05
 Identities = 50/351 (14%), Positives = 98/351 (27%), Gaps = 90/351 (25%)

Query: 26  PRIFGHEAAGVVESV--GEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINP 82
             +      G  ++    +     +V   +   +F     +C    + +  +  LL    
Sbjct: 151 KNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID 210

Query: 83  VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI------ 136
                 +D  S   +    +   L           +         L  L  V        
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAEL-RRLLKSKPYENC--------LLVLLNVQNAKAWNA 261

Query: 137 --LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 194
             LSC +   L  T       R   V  F      L+AA    I+       +D  S   
Sbjct: 262 FNLSCKI---LLTT-------RFKQVTDF------LSAATTTHIS-------LDHHSMTL 298

Query: 195 EEAKKFGV-TDFVNTSEHDRPIQE---------VIAEMTNGGVDRS-----VECTGNIDN 239
              +   +   +++    D P +          +IAE    G+        V C   +  
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD-KLTT 357

Query: 240 MISAF----------ECVHDGWGVAVL---VGVPSKDAVFM--------TKPINVLNERT 278
           +I +           +       ++V      +P+   +          +  + V+N+  
Sbjct: 358 IIESSLNVLEPAEYRKMFDR---LSVFPPSAHIPTI--LLSLIWFDVIKSDVMVVVNKLH 412

Query: 279 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT-HR--IPFSEINKAFEY 326
                    K  T   S+  +Y+  +++LE     HR  +    I K F+ 
Sbjct: 413 KYSLVEKQPKEST--ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDS 461

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 26  PRIFGHEAAGVVESVGEGVSDLEVGDHV 53
             I G E +G +  VG GVS   VGD V
Sbjct: 86  SPILGLELSGEIVGVGPGVSGYAVGDKV 113

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355

 Score = 40.2 bits (95), Expect = 6e-04
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)

Query: 140 GVSTGLGATLNVAKPE--RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 197
           GV   + AT+         G +V V GLGAVG + A  A  AGA +++  D  ++R   A
Sbjct: 156 GVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHA 214

Query: 198 KKFGVT 203
              G T
Sbjct: 215 VALGHT 220

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	341
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.97
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.89
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.27
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	99.0
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.66
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.61
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.52
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.47
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.37
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.34
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.26
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.16
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.08
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.04
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.03
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.93
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.92
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.89
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.87
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.87
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.74
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.7
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.7
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.65
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.65
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.63
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.48
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.47
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.47
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.44
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.25
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.22
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.21
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.16
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.08
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.05
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.05
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.02
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.0
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.99
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.9
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.9
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.88
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.85
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.82
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.81
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.81
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	96.8
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.79
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.77
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.73
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.73
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.72
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.71
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.71
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.69
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.69
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.67
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.66
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.64
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.64
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.64
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.63
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.62
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.61
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.58
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.58
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	96.57
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.57
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.57
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.57
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.55
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.54
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.54
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.53
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.53
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.51
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.51
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.5
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.49
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.49
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.48
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.46
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.45
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.45
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.43
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.43
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.41
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.41
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.39
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.38
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.37
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.36
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.36
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.35
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.35
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.35
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.35
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.34
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.34
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.34
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.34
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.34
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.32
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.31
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.3
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.3
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.28
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.28
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.27
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.27
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.27
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.26
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.25
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	96.25
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.25
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.25
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.24
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.23
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.23
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.23
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.23
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.22
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.22
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.22
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.22
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.21
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.21
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.21
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.21
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.21
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.2
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.19
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.18
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.18
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.17
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.17
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.17
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.17
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.16
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.16
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.15
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.15
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.14
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.14
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	96.14
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.14
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.14
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.13
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.13
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.13
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.13
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.13
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.13
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	96.13
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.12
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.11
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.11
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.11
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.11
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.1
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.09
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.09
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.09
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.09
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.09
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.08
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.08
4had_A	350	Probable oxidoreductase protein; structural genomi	96.08
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.07
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.07
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.06
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.05
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.05
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.04
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.04
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.04
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.03
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.03
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.03
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.03
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.02
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.02
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.02
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.01
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.01
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.01
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.99
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.99
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.99
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.99
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	95.99
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.97
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.96
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.96
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.96
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.95
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	95.95
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.95
1spx_A	278	Short-chain reductase family member (5L265); paral	95.95
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.95
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	95.94
1xq1_A	266	Putative tropinone reducatse; structural genomics,	95.94
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.93
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	95.92
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.92
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.92
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	95.92
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.91
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	95.91
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	95.91
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	95.9
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.9
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.89
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	95.88
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	95.86
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.86
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.86
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	95.85
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.84
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.84
3rih_A	293	Short chain dehydrogenase or reductase; structural	95.83
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	95.82
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.82
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	95.81
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.81
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	95.8
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.8
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.78
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.78
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	95.78
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.78
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.78
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	95.77
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.77
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	95.76
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	95.75
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.74
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.73
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.73
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.72
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	95.72
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.71
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.71
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.71
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	95.7
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.7
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.68
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.68
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	95.66
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.65
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.65
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.64
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.64
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.64
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.64
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.63
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.63
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.63
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.62
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.62
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.61
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.6
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.6
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.6
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	95.6
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.59
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.59
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.59
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.58
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.58
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.57
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.57
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.57
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	95.55
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.55
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.54
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.54
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.53
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.53
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.53
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.5
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.5
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.5
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	95.49
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	95.48
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.48
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.48
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	95.48
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	95.47
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.46
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.46
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.45
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.45
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.44
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	95.42
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.41
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.41
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.4
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.4
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.4
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.38
1xq6_A	253	Unknown protein; structural genomics, protein stru	95.36
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.34
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	95.32
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.31
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	95.31
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.31
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.3
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	95.3
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.3
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.29
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.28
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.28
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.28
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	95.27
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.26
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	95.26
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.26
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.26
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	95.24
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.24
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	95.23
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.23
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.22
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	95.22
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.22
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.22
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.21
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.2
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.2
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.19
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.19
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	95.17
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	95.17
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.16
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.16
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.16
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.16
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	95.14
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.13
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.13
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.13
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.12
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.11
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	95.1
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.1
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.1
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.09
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	95.09
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.09
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.08
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.07
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.07
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.06
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	95.05
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.05
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.04
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.03
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.02
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.02
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.01
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.01
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	94.98
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	94.94
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	94.94
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.94
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	94.93
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	94.92
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	94.92
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	94.91
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	94.91
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	94.91
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	94.91
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	94.91
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	94.91
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.9
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	94.9
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	94.9
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.9
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	94.89
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	94.88
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	94.87
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	94.85
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	94.84
4hc4_A	376	Protein arginine N-methyltransferase 6; HRMT1L6, S	94.82
4h3v_A	390	Oxidoreductase domain protein; structural genomics	94.8
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	94.8
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.8
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	94.8
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	94.78
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	94.77
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	94.77
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	94.75
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	94.74
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	94.74
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	94.73
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	94.73
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	94.72
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	94.72
2o07_A	304	Spermidine synthase; structural genomics, structur	94.72
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	94.69
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	94.67
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	94.67
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	94.63
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.63
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	94.6
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	94.6
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	94.59
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	94.58
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	94.57
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	94.57
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	94.56
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.55
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	94.55
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	94.53
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	94.53
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.53
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	94.52
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	94.51
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	94.51
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	94.5
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	94.49
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	94.49
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	94.48
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	94.47
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	94.47
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	94.47
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	94.46
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	94.45

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=8.8e-59  Score=431.73  Aligned_cols=341  Identities=52%  Similarity=0.936  Sum_probs=297.4

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|+....... ...+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+++++|+|++..
T Consensus        37 lVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  116 (378)
T 3uko_A           37 RIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVR  116 (378)
T ss_dssp             EEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSH
T ss_pred             EEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcc
Confidence            689999999999966544332 3468999999999999999999999999999999999999999999999999999987


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      .....|....+|..+|..+|..+.+..+.|+|+||++++++.++++|+++++++||.+++++.|||+++.+..++++|++
T Consensus       117 ~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~  196 (378)
T 3uko_A          117 SATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSN  196 (378)
T ss_dssp             HHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCC
T ss_pred             cccccccccccCccccccCCcccccccCCcceEeEEEechhheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCE
Confidence            65445555556667788888777777778999999999999999999999999999999999999999888899999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |||+|+|++|++++|+||.+|+.+|++++++++|+++++++|++.++|+.+.+.++.+.+++.+++++|++|||+|++..
T Consensus       197 VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~  276 (378)
T 3uko_A          197 VAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSV  276 (378)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHH
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHH
Confidence            99999999999999999999998899999999999999999999999987433348999999998899999999999889


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCc
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSE  319 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  319 (341)
                      ++.+++++++++|+++.+|.......++.....+.+++++.|+..+.+...+++++++++++++++.+.++++++|+|++
T Consensus       277 ~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~  356 (378)
T 3uko_A          277 MRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGE  356 (378)
T ss_dssp             HHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGG
T ss_pred             HHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHH
Confidence            99999999993299999997654444444333344588888887664433457899999999999999899999999999


Q ss_pred             HHHHHHHHhcCCcceEEEecCC
Q 019414          320 INKAFEYMVKGEGLRCIISMED  341 (341)
Q Consensus       320 i~ea~~~~~~~~~~k~vl~~~~  341 (341)
                      +++|++.+.+++..|+||++++
T Consensus       357 ~~~A~~~~~~g~~~Kvvi~~~~  378 (378)
T 3uko_A          357 INKAFDLLHEGTCLRCVLDTSK  378 (378)
T ss_dssp             HHHHHHHTTCTTCSEEEEETTC
T ss_pred             HHHHHHHHHCCCceEEEEecCC
Confidence            9999999999888899999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.4e-54  Score=402.78  Aligned_cols=334  Identities=42%  Similarity=0.747  Sum_probs=272.3

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|+.|+..........+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+++++|+|++...
T Consensus        38 lVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~  117 (373)
T 1p0f_A           38 RIKILASGICGSDSSVLKEIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDM  117 (373)
T ss_dssp             EEEEEEEECCHHHHHHHTTSSCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCST
T ss_pred             EEEEeEEeecchhHHHhcCCCCCCCCcccCcCceEEEEEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCc
Confidence            68999999999996654333334679999999999999999999999999999999999999999999999999998643


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      .-..|.. .++...+..+|....+....|+|+||+++|++.++++|++++++ ||++++++.|||+++.+.+++++|++|
T Consensus       118 ~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~V  195 (373)
T 1p0f_A          118 GAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTC  195 (373)
T ss_dssp             TTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEE
T ss_pred             ccccccc-cCCccccccCCcccccccCCccceeEEEEchhhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEE
Confidence            1100110 01111122223222222345899999999999999999999999 999999999999998888999999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      ||+|+|++|++++|+||.+|+.+|++++++++|+++++++|++.++|+++.+.++.+.+++.+++++|+|||++|.++.+
T Consensus       196 lV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~  275 (373)
T 1p0f_A          196 AVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETM  275 (373)
T ss_dssp             EEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHH
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHH
Confidence            99999999999999999999978999999999999999999999998875222388889888877999999999988899


Q ss_pred             HHHHHHhcCCC-cEEEEEccCCCCcccccccce-eeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          241 ISAFECVHDGW-GVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       241 ~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      +.+++++++ + |+++.+|.........+.... +.++ ++.|+....+.. +++++++++++++++.+.++++++|+++
T Consensus       276 ~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~-~~~~~~~~l~~~g~i~~~~~i~~~~~l~  352 (373)
T 1p0f_A          276 MNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVFGGFKG-EEVSRLVDDYMKKKINVNFLVSTKLTLD  352 (373)
T ss_dssp             HHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSGGGCCG-GGHHHHHHHHHTTSSCGGGGEEEEECGG
T ss_pred             HHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eEEeeccCCcCH-HHHHHHHHHHHcCCCCchheEEEEeeHH
Confidence            999999999 5 999999975532222222222 3455 888876543322 5799999999999998888889999999


Q ss_pred             cHHHHHHHHhcCCcceEEEec
Q 019414          319 EINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       319 ~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      ++++|++.+++++..|+|++|
T Consensus       353 ~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 1p0f_A          353 QINKAFELLSSGQGVRSIMIY  373 (373)
T ss_dssp             GHHHHHHHTTTSSCSEEEEEC
T ss_pred             HHHHHHHHHHCCCcceEEEeC
Confidence            999999999888878999875

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=2.3e-54  Score=401.53  Aligned_cols=336  Identities=44%  Similarity=0.796  Sum_probs=272.7

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|+.|+..........+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+++++|+|++...
T Consensus        37 lVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~  116 (374)
T 2jhf_A           37 RIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL  116 (374)
T ss_dssp             EEEEEEEECCHHHHHHHHTSSCCCSSBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSS
T ss_pred             EEEEeEEeechhhHHHHcCCCCCCCCcccCcCceEEEEEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCcc
Confidence            68999999999996654332222379999999999999999999999999999999999999999999999999998643


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ....|+. .++...+..+|....+....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|++|
T Consensus       117 ~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~V  195 (374)
T 2jhf_A          117 SMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTC  195 (374)
T ss_dssp             SSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEE
T ss_pred             ccccccc-cCCcccccccccccccccCCccCeeEEEEchHHeEECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEE
Confidence            2111110 011111112222222222358999999999999999999999999999999999999998888999999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  240 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~  240 (341)
                      ||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++|+++.+.++.+.+++.+++++|++||++|.++.+
T Consensus       196 lV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~  275 (374)
T 2jhf_A          196 AVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTM  275 (374)
T ss_dssp             EEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHH
T ss_pred             EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHH
Confidence            99999999999999999999978999999999999999999999998875222388888888877999999999988899


Q ss_pred             HHHHHHhcCCC-cEEEEEccCCCCcccccccc-eeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          241 ISAFECVHDGW-GVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       241 ~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      +.+++++++ + |+++.+|.........+... .+.++ ++.|+....+...+++++++++++++++.+.++++++|+|+
T Consensus       276 ~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~  353 (374)
T 2jhf_A          276 VTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFE  353 (374)
T ss_dssp             HHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGG
T ss_pred             HHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeHH
Confidence            999999999 5 89999997553222222222 23456 88887654332235789999999999998888889999999


Q ss_pred             cHHHHHHHHhcCCcceEEEec
Q 019414          319 EINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       319 ~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      ++++|++.+.+++..|+|++|
T Consensus       354 ~~~~A~~~~~~~~~~Kvvi~~  374 (374)
T 2jhf_A          354 KINEGFDLLRSGESIRTILTF  374 (374)
T ss_dssp             GHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHHHHHHHHHCCCcceEEEeC
Confidence            999999999988888999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-54  Score=402.58  Aligned_cols=335  Identities=46%  Similarity=0.788  Sum_probs=272.2

Q ss_pred             CccccccCCcCccee-eeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFV-FGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~-~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|+. .........+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+++++|+|+...
T Consensus        37 lVkv~a~gi~~~D~~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  116 (374)
T 1cdo_A           37 RIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGW  116 (374)
T ss_dssp             EEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSG
T ss_pred             EEEEeEEeechhhHHHHhCCCCCCCCCcccCccceEEEEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcc
Confidence            689999999999976 3332223467999999999999999999999999999999999999999999999999999764


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      .....|.. .++...+..+|....+....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|++
T Consensus       117 ~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  195 (374)
T 1cdo_A          117 ANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGST  195 (374)
T ss_dssp             GGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCE
T ss_pred             cccccccc-cCCccccccCCcccccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCE
Confidence            32111111 01111122222222222235899999999999999999999999999999999999999888899999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |||+|+|++|++++|+||.+|+.+|++++++++++++++++|++.++|+.+.+.++.+.+++.+++++|++||++|.+..
T Consensus       196 VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~  275 (374)
T 1cdo_A          196 CAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGV  275 (374)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHH
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHH
Confidence            99999999999999999999997899999999999999999999999887522238888888887799999999998788


Q ss_pred             HHHHHHHhcCCC-cEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          240 MISAFECVHDGW-GVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       240 ~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      ++.+++++++ + |+++.+|.... ....... ..+.++ ++.|+....+...+++++++++++++++.+.++++++|+|
T Consensus       276 ~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l  352 (374)
T 1cdo_A          276 MRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-TWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL  352 (374)
T ss_dssp             HHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG
T ss_pred             HHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-eEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecH
Confidence            9999999999 5 99999997653 1222221 123456 8888765433223568999999999999888888999999


Q ss_pred             CcHHHHHHHHhcCCcceEEEec
Q 019414          318 SEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      +++++|++.+++++..|+|++|
T Consensus       353 ~~~~~A~~~~~~~~~~kvvi~~  374 (374)
T 1cdo_A          353 ESVNDAIDLMKHGKCIRTVLSL  374 (374)
T ss_dssp             GGHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHHHHHHHHHHCCCeeEEEEeC
Confidence            9999999999988888999975

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=2e-54  Score=402.22  Aligned_cols=336  Identities=40%  Similarity=0.771  Sum_probs=270.3

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc-
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR-   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~-   79 (341)
                      |||++++|+|+.|+..........+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+++++|+|++.. 
T Consensus        37 lVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~  116 (376)
T 1e3i_A           37 RIQVIATCVCPTDINATDPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRN  116 (376)
T ss_dssp             EEEEEEEECCHHHHHTTCTTSCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCC
T ss_pred             EEEEeEEeEchhhHHHhcCCCCCCCCcccCccccEEEEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCc
Confidence            6899999999999665433222357999999999999999999999999999999999999999999999999998754 


Q ss_pred             ---ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           80 ---INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        80 ---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                         .+...|.. .++...+..+|....+....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++
T Consensus       117 ~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~  195 (376)
T 1e3i_A          117 FKYPTIDQELM-EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTP  195 (376)
T ss_dssp             SSCGGGSSCSC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCT
T ss_pred             ccccccccccc-ccCccccccCCcccccccCCccceeEEEeccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCC
Confidence               10000110 00101111122111122234899999999999999999999999999999999999999888899999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      |++|||+|+|++|++++|+||.+|+.+|++++++++|+++++++|++.++|+++.+.++.+.+++.+++++|+|||++|.
T Consensus       196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~  275 (376)
T 1e3i_A          196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT  275 (376)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCC
Confidence            99999999999999999999999997899999999999999999999999887522238888888887799999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      ++.++++++++++++|+++.+|.......++.. ..+.++ ++.|+....+...+++++++++++++++.+.++++++|+
T Consensus       276 ~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~-~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~  353 (376)
T 1e3i_A          276 AQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTV-DVILGR-SINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALP  353 (376)
T ss_dssp             HHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHH-HHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEE
T ss_pred             HHHHHHHHHHhhcCCCEEEEECCCCCccccCHH-HhhccC-eEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeec
Confidence            888999999999932999999974322222211 123456 888876543322356899999999999988888899999


Q ss_pred             CCcHHHHHHHHhcCCcceEEEec
Q 019414          317 FSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      |+++++|++.+.+++..|+||+|
T Consensus       354 l~~~~~A~~~~~~~~~~Kvvi~~  376 (376)
T 1e3i_A          354 FESINDAIDLMKEGKSIRTILTF  376 (376)
T ss_dssp             GGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             HHHHHHHHHHHhcCCcceEEEeC
Confidence            99999999999988888999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=2.4e-54  Score=401.34  Aligned_cols=336  Identities=47%  Similarity=0.834  Sum_probs=272.5

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|+........ ..+|.++|||++|+|+++|++|++|++||||++.+..+||.|++|++|++|+|++..
T Consensus        35 lVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~  114 (373)
T 2fzw_A           35 RIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIR  114 (373)
T ss_dssp             EEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTH
T ss_pred             EEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcc
Confidence            6899999999999665433222 357999999999999999999999999999999999999999999999999998753


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      .....|+. .++...+..+|....+....|+|+||+++|++.++++|+++++++||++++++.|||+++.+..++++|++
T Consensus       115 ~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  193 (373)
T 2fzw_A          115 VTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSV  193 (373)
T ss_dssp             HHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCE
T ss_pred             cccccccc-cCCcccccccccccccccCCccceeEEEEchhheEECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCE
Confidence            21000110 01111122223222223345899999999999999999999999999999999999999888899999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++++++.+.++.+.+++.+++++|++||++|.+..
T Consensus       194 VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~  273 (373)
T 2fzw_A          194 CAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKV  273 (373)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHH
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHH
Confidence            99999999999999999999997899999999999999999999999887522238888888887799999999998788


Q ss_pred             HHHHHHHhcCCC-cEEEEEccCCCCcccccccc-eeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          240 MISAFECVHDGW-GVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       240 ~~~~~~~l~~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      ++.+++++++ + |+++.+|............. .+.++ ++.|+....+...+++++++++++++++.+.++++++|+|
T Consensus       274 ~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l  351 (373)
T 2fzw_A          274 MRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF  351 (373)
T ss_dssp             HHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEG
T ss_pred             HHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeH
Confidence            9999999999 5 99999997553222222222 23456 8888765433223568999999999999888888999999


Q ss_pred             CcHHHHHHHHhcCCcceEEEec
Q 019414          318 SEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      +++++|++.+.+++..|+|+++
T Consensus       352 ~~~~~A~~~~~~~~~~kvvi~~  373 (373)
T 2fzw_A          352 DEINKAFELMHSGKSIRTVVKI  373 (373)
T ss_dssp             GGHHHHHHHHHHTCCSEEEEEC
T ss_pred             HHHHHHHHHHhCCCcceEEEeC
Confidence            9999999999988888999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-54  Score=402.59  Aligned_cols=334  Identities=29%  Similarity=0.508  Sum_probs=272.8

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|+.|+..........+|.++|||++|+|+++|++|++|++||||++.+ .+|+.|++|++|++|+|++...
T Consensus        35 lVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~  113 (371)
T 1f8f_A           35 LVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFG  113 (371)
T ss_dssp             EEEEEEEECCHHHHHHHTTSSCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHH
T ss_pred             EEEEEEeecCchhHHHHcCCCCCCCCcccCcccceEEEEeCCCCCCCCCCCEEEecC-CCCCCChhhhCcCccccccccc
Confidence            689999999999966544433446899999999999999999999999999999999 9999999999999999997653


Q ss_pred             cCcccccccCCCcccc-cCCCcc-ccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           81 NPVRGVMLADGQSRFS-INGEPV-NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~-~~g~~~-~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      ....|+. .+|..++. .+|... .+....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|+
T Consensus       114 ~~~~g~~-~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~  192 (371)
T 1f8f_A          114 RNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPAS  192 (371)
T ss_dssp             HSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTC
T ss_pred             ccccccc-ccccccccccCCccccccccCCccccCeEEechhheEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCC
Confidence            2110100 01111110 011110 01123589999999999999999999999999999999999999988889999999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|||+|+|++|++++|+||.+|+++|++++++++|+++++++|++.++++++.+  +.+.+++.+++++|+|||++|.++
T Consensus       193 ~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~~~~~~~gg~D~vid~~g~~~  270 (371)
T 1f8f_A          193 SFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPE  270 (371)
T ss_dssp             EEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTSCEEEEEECSCCHH
T ss_pred             EEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccC--HHHHHHHhcCCCCcEEEECCCCHH
Confidence            999999999999999999999997799999999999999999999999987765  888888888779999999999888


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      .+++++++++++ |+++.+|.........+.. ..+.+++++.|+........+++++++++++++++.+.+++++ |+|
T Consensus       271 ~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l  348 (371)
T 1f8f_A          271 ILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF  348 (371)
T ss_dssp             HHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEG
T ss_pred             HHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecH
Confidence            899999999998 9999999764322222221 2345789999876543322356899999999999988888888 999


Q ss_pred             CcHHHHHHHHhcCCcceEEEecC
Q 019414          318 SEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                      +++++|++.+.+++.+|+|+++.
T Consensus       349 ~~~~~A~~~~~~~~~~Kvvv~~~  371 (371)
T 1f8f_A          349 DEINQAAIDSRKGITLKPIIKIA  371 (371)
T ss_dssp             GGHHHHHHHHHHTSCSEEEEECC
T ss_pred             HHHHHHHHHHHCCCceEEEEeeC
Confidence            99999999999888889999874

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2.8e-54  Score=399.91  Aligned_cols=310  Identities=24%  Similarity=0.356  Sum_probs=270.0

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++++|+.|+..........+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|++|+|++...
T Consensus        51 lVkv~a~gi~~~D~~~~~G~~~~~~p~v~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~  130 (370)
T 4ej6_A           51 LVKVEACGICGTDRHLLHGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRA  130 (370)
T ss_dssp             EEEEEEEECCHHHHHHHTTSSCCCSSEECCCSEEEEEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE
T ss_pred             EEEEEEEeecHHHHHHHcCCCCCCCCeecCcceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccc
Confidence            68999999999997765544456789999999999999999999999999999999999999999999999999998755


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ..                      ....|+|+||+++|++.++++|+++++++|| ++.+++|||+++ +.+++++|++|
T Consensus       131 ~g----------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~V  186 (370)
T 4ej6_A          131 IG----------------------IHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTV  186 (370)
T ss_dssp             BT----------------------TTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEE
T ss_pred             cC----------------------CCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEE
Confidence            31                      1234799999999999999999999999987 778999999997 78899999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHH---HhcCCccEEEeccCCh
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE---MTNGGVDRSVECTGNI  237 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~---~~~~~~d~vld~~g~~  237 (341)
                      ||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++|+++.+  +.+.+++   .+++++|+||||+|++
T Consensus       187 lV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~~i~~~~~~~~gg~Dvvid~~G~~  264 (370)
T 4ej6_A          187 AILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGD--VVEAIAGPVGLVPGGVDVVIECAGVA  264 (370)
T ss_dssp             EEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSC--HHHHHHSTTSSSTTCEEEEEECSCCH
T ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcC--HHHHHHhhhhccCCCCCEEEECCCCH
Confidence            9999999999999999999998999999999999999999999999998776  8888888   7777999999999988


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      ..++.++++++++ |+++.+|............ ..+.+++++.|+....    .+++++++++++|++.+.++++++|+
T Consensus       265 ~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~l~~~g~i~~~~~i~~~~~  339 (370)
T 4ej6_A          265 ETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP----FVHRRAADLVATGAIEIDRMISRRIS  339 (370)
T ss_dssp             HHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT----TCHHHHHHHHHTTCSCCGGGEEEEEC
T ss_pred             HHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh----HHHHHHHHHHHcCCCChhHcEEEEEE
Confidence            8999999999998 9999999765532222222 2356899999986543    46999999999999999999999999


Q ss_pred             CCcHHHHHHHHhcCCc--ceEEEecCC
Q 019414          317 FSEINKAFEYMVKGEG--LRCIISMED  341 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~--~k~vl~~~~  341 (341)
                      |+++++|++.+.+++.  .|+++++++
T Consensus       340 l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          340 LDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             GGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             HHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence            9999999999988774  488887753

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=8.4e-53  Score=387.13  Aligned_cols=312  Identities=22%  Similarity=0.320  Sum_probs=269.0

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|+.|+..........+|+++|||++|+|+++|++|+++++||||++.+..+|+.|.+|+.+++|+|.+...
T Consensus        29 lVkv~a~gi~~sD~~~~~g~~~~~~P~i~G~E~~G~V~~vG~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~  108 (346)
T 4a2c_A           29 RVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDF  108 (346)
T ss_dssp             EEEEEEEECCTTHHHHHHSSCSSSSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEE
T ss_pred             EEEEEEEEECHHHHHHHcCCCCCCCCccccEEEEEEEEEECCCcccccCCCeEEeeeccCCCCcccccCCccccCCCccc
Confidence            68999999999996554445556789999999999999999999999999999999999999999999999999998765


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ..                      ...+|+|+||+++|++.++++|+++++++||.+. +++++++ +.+..++++|++|
T Consensus       109 ~g----------------------~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~-~~~~~~~~~g~~V  164 (346)
T 4a2c_A          109 IG----------------------SRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLH-AFHLAQGCENKNV  164 (346)
T ss_dssp             BT----------------------TTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHH-HHHHTTCCTTSEE
T ss_pred             cc----------------------CCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHH-HHHHhccCCCCEE
Confidence            31                      2234799999999999999999999999988764 4444444 4778899999999


Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHH
Q 019414          161 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDN  239 (341)
Q Consensus       161 lI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~  239 (341)
                      ||+|+|++|++++|+||.+|+..+++++++++|+++++++|++.++|+++.+  +.+.++.++++ ++|+++|++|++..
T Consensus       165 lV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~--~~~~~~~~~~~~g~d~v~d~~G~~~~  242 (346)
T 4a2c_A          165 IIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMS--APQMQSVLRELRFNQLILETAGVPQT  242 (346)
T ss_dssp             EEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSC--HHHHHHHHGGGCSSEEEEECSCSHHH
T ss_pred             EEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCC--HHHHHHhhcccCCcccccccccccch
Confidence            9999999999999999999998889999999999999999999999998877  78888888877 99999999999899


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCcccccc--cceeeecceEEEeeecCC--CCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTK--PINVLNERTLKGTFFGNY--KPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      +++++++++++ |+++.+|....+..+...  ...+.+++++.|++....  ...+++++++++++++++.+.++++++|
T Consensus       243 ~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~lI~~~~  321 (346)
T 4a2c_A          243 VELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRG  321 (346)
T ss_dssp             HHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCSCCGGGEEEEE
T ss_pred             hhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCCCCCccEeEEE
Confidence            99999999998 999999987655433221  123568999999865432  1234689999999999999999999999


Q ss_pred             cCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          316 PFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +|+++++|++.+.+++. +|+||.+
T Consensus       322 ~l~~~~~A~~~l~~~~~~GKvVl~P  346 (346)
T 4a2c_A          322 SFESFAQAVRDIARNAMPGKVLLIP  346 (346)
T ss_dssp             CHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEEC
Confidence            99999999999988875 5999875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=2.4e-53  Score=389.73  Aligned_cols=306  Identities=23%  Similarity=0.371  Sum_probs=265.6

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEE-EecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V-~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|+.|+........  +.+|+++|||++|+|+++|++|++|++|||| +.++..+|+.|++|+++++|+|.+
T Consensus        31 lVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~  110 (340)
T 3s2e_A           31 QVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEK  110 (340)
T ss_dssp             EEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTT
T ss_pred             EEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCcc
Confidence            6899999999999766544333  4689999999999999999999999999999 457788999999999999999998


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      .....                      ...+|+|+||+++|++.++++|+++++++||++++++.|||+++ +..++++|
T Consensus       111 ~~~~g----------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g  167 (340)
T 3s2e_A          111 QQNTG----------------------YSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL-KVTDTRPG  167 (340)
T ss_dssp             CEEBT----------------------TTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH-HTTTCCTT
T ss_pred             ccccC----------------------CCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH-HHcCCCCC
Confidence            76531                      22347999999999999999999999999999999999999997 67799999


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      ++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++|+++.+  +.+.+++ +.+++|++||++|++
T Consensus       168 ~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~--~~~~~~~-~~g~~d~vid~~g~~  243 (340)
T 3s2e_A          168 QWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARDTD--PAAWLQK-EIGGAHGVLVTAVSP  243 (340)
T ss_dssp             SEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTTSC--HHHHHHH-HHSSEEEEEESSCCH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCCcC--HHHHHHH-hCCCCCEEEEeCCCH
Confidence            999999999999999999999999 999999999999999999999999998766  8888888 445899999999988


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      +.++.++++++++ |+++.+|.......++. ...+.+++++.|+.....   +++++++++++++++.+.   ++.++|
T Consensus       244 ~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~---~~~~~l  315 (340)
T 3s2e_A          244 KAFSQAIGMVRRG-GTIALNGLPPGDFGTPI-FDVVLKGITIRGSIVGTR---SDLQESLDFAAHGDVKAT---VSTAKL  315 (340)
T ss_dssp             HHHHHHHHHEEEE-EEEEECSCCSSEEEEEH-HHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSCCCC---EEEECG
T ss_pred             HHHHHHHHHhccC-CEEEEeCCCCCCCCCCH-HHHHhCCeEEEEEecCCH---HHHHHHHHHHHhCCCCce---EEEEeH
Confidence            9999999999998 99999997654433332 223468899988775543   579999999999988764   578899


Q ss_pred             CcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          318 SEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      +++++|++.+.+++. +|+|+++++
T Consensus       316 ~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          316 DDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             GGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             HHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999999886 599999875

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=4.2e-53  Score=391.57  Aligned_cols=310  Identities=22%  Similarity=0.296  Sum_probs=264.8

Q ss_pred             CccccccCCcCcceeeecc---C-CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ---G-QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~---~-~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|+.|+.....   + ...++|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|++|.|+
T Consensus        44 lVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~  123 (363)
T 3m6i_A           44 TVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCE  123 (363)
T ss_dssp             EEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCT
T ss_pred             EEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCC
Confidence            6899999999999765432   2 23467999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      +..+...                     ....|+|+||+++|++.++++|+ +++++||.+ .+++|||+++ +.+++++
T Consensus       124 ~~~~~g~---------------------~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~-~~~~ta~~~l-~~~~~~~  179 (363)
T 3m6i_A          124 RVDFLST---------------------PPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML-EPLSVALAGL-QRAGVRL  179 (363)
T ss_dssp             TCEETTS---------------------TTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH-HHHHHHHHHH-HHHTCCT
T ss_pred             CccccCC---------------------CCCCccceeEEEEehhhEEECCC-CCHHHHHhh-hHHHHHHHHH-HHcCCCC
Confidence            8765311                     01247999999999999999999 999999977 5889999997 7889999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC---CCChhHHHHHHHHhcC-CccEEEe
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS---EHDRPIQEVIAEMTNG-GVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~---~~~~~~~~~i~~~~~~-~~d~vld  232 (341)
                      |++|||+|+|++|++++|+||.+|+++|++++++++|+++++++ ++.++++.   ..+.++.+.+++.+++ ++|++||
T Consensus       180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid  258 (363)
T 3m6i_A          180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE  258 (363)
T ss_dssp             TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence            99999999999999999999999996699999999999999999 76665543   1223488889999977 9999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCcee
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT  312 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  312 (341)
                      ++|++..++.++++++++ |+++.+|.......++.. ..+.+++++.++...    .++++++++++++|++.+.++++
T Consensus       259 ~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~  332 (363)
T 3m6i_A          259 CTGVESSIAAAIWAVKFG-GKVFVIGVGKNEIQIPFM-RASVREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVT  332 (363)
T ss_dssp             CSCCHHHHHHHHHHSCTT-CEEEECCCCCSCCCCCHH-HHHHHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEE
T ss_pred             CCCChHHHHHHHHHhcCC-CEEEEEccCCCCccccHH-HHHhcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHcee
Confidence            999977899999999998 999999976554433332 235688888887644    37899999999999999888899


Q ss_pred             eeecCCcHHHHHHHHhcCC--cceEEEecCC
Q 019414          313 HRIPFSEINKAFEYMVKGE--GLRCIISMED  341 (341)
Q Consensus       313 ~~~~~~~i~ea~~~~~~~~--~~k~vl~~~~  341 (341)
                      ++|+++++++|++.+.+++  .+|+|++.+|
T Consensus       333 ~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          333 HRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             EEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             eeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            9999999999999998873  4699998865

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=5.4e-53  Score=388.60  Aligned_cols=310  Identities=25%  Similarity=0.348  Sum_probs=253.3

Q ss_pred             CccccccCCcCcceeeecc-CC---CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ-GQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~-~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|+.|+..... ..   ...+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|++|+|+
T Consensus        33 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~  112 (348)
T 2d8a_A           33 LIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQ  112 (348)
T ss_dssp             EEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCCC-----------
T ss_pred             EEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCC
Confidence            6899999999999665433 21   2467999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      +.....                      ....|+|+||+++|++.++++|+++++++||.+. +++|||+++ +.+++ +
T Consensus       113 ~~~~~g----------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~  167 (348)
T 2d8a_A          113 NTKIFG----------------------VDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVDTV-LAGPI-S  167 (348)
T ss_dssp             -CEETT----------------------TSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHHHHHHHH-TTSCC-T
T ss_pred             CCCeec----------------------CCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHHHHHHHH-HhcCC-C
Confidence            865421                      1124799999999999999999999999998774 789999997 67889 9


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      |++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.++++++.+  +.+.+++.+++ ++|++||++|
T Consensus       168 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~v~~~~~g~g~D~vid~~g  245 (348)
T 2d8a_A          168 GKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEED--VVKEVMDITDGNGVDVFLEFSG  245 (348)
T ss_dssp             TCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSC--HHHHHHHHTTTSCEEEEEECSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcC--HHHHHHHHcCCCCCCEEEECCC
Confidence            99999999999999999999999987899999999999999999999999987765  88889998887 8999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      .++.+++++++++++ |+++.+|.......++.....+.+++++.|+....  ..++++++++++++|++.+.++++++|
T Consensus       246 ~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~  322 (348)
T 2d8a_A          246 APKALEQGLQAVTPA-GRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRH--LWETWYTVSRLLQSGKLNLDPIITHKY  322 (348)
T ss_dssp             CHHHHHHHHHHEEEE-EEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCC--SHHHHHHHHHHHHHTCCCCTTTEEEEE
T ss_pred             CHHHHHHHHHHHhcC-CEEEEEccCCCCcccCchHHHHhCCcEEEEecCCC--cHHHHHHHHHHHHcCCCChHHhheeeC
Confidence            888899999999998 99999997654333322012346788998875432  125689999999999998888899999


Q ss_pred             c-CCcHHHHHHHHhcCCcceEEEecC
Q 019414          316 P-FSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       316 ~-~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                      + ++++++|++.++++..+|+|++++
T Consensus       323 ~gl~~~~~A~~~~~~~~~gKvvi~~~  348 (348)
T 2d8a_A          323 KGFDKYEEAFELMRAGKTGKVVFMLK  348 (348)
T ss_dssp             ESSTTHHHHHHHHHTTCCSEEEEEC-
T ss_pred             CCHHHHHHHHHHHhCCCceEEEEeeC
Confidence            9 999999999998755679999874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=1.4e-52  Score=385.41  Aligned_cols=309  Identities=21%  Similarity=0.295  Sum_probs=264.0

Q ss_pred             CccccccCCcCcceeeeccCC---CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|+.|+.......   ...+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+++++|+|..
T Consensus        29 lVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~  108 (345)
T 3jv7_A           29 LLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTR  108 (345)
T ss_dssp             EEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSS
T ss_pred             EEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCcc
Confidence            689999999999976543322   24689999999999999999999999999999999999999999999999999953


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEee-cCceEECCCCCCchhhhhccccchhhhhhhhh-hcCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKINPLAPLDKVCILSCGVSTGLGATLN-VAKPE  155 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~-~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~  155 (341)
                      ......            ..     .+....|+|+||+++| ++.++++|+ +++++||++++++.|||+++.+ ...++
T Consensus       109 ~~~~~~------------~~-----~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~  170 (345)
T 3jv7_A          109 AADLGI------------TP-----PGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTPYHAISRVLPLLG  170 (345)
T ss_dssp             HHHHTC------------CC-----BTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHHHHHHHTTGGGCC
T ss_pred             cccccc------------cc-----CCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHHHHHHHHhccCCC
Confidence            322100            00     0112347999999999 999999999 9999999999999999999876 45899


Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~  234 (341)
                      +|++|||+|+|++|++++|+||.+|..+|++++++++|+++++++|++.++++++ +  +.+.+++.+++ ++|++||++
T Consensus       171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~--~~~~v~~~t~g~g~d~v~d~~  247 (345)
T 3jv7_A          171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-G--AADAIRELTGGQGATAVFDFV  247 (345)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-T--HHHHHHHHHGGGCEEEEEESS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-c--HHHHHHHHhCCCCCeEEEECC
Confidence            9999999999999999999999995449999999999999999999999998865 4  88899999988 999999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCC-CcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceee
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSK-DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH  313 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  313 (341)
                      |++..+++++++++++ |+++.+|.... ...++  ...+.+++++.++.....   +++++++++++++++.+   +++
T Consensus       248 G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~--~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~---~~~  318 (345)
T 3jv7_A          248 GAQSTIDTAQQVVAVD-GHISVVGIHAGAHAKVG--FFMIPFGASVVTPYWGTR---SELMEVVALARAGRLDI---HTE  318 (345)
T ss_dssp             CCHHHHHHHHHHEEEE-EEEEECSCCTTCCEEES--TTTSCTTCEEECCCSCCH---HHHHHHHHHHHTTCCCC---CEE
T ss_pred             CCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCcC--HHHHhCCCEEEEEecCCH---HHHHHHHHHHHcCCCce---EEE
Confidence            9977999999999998 99999997665 33343  244678899988765443   57999999999998876   368


Q ss_pred             eecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          314 RIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       314 ~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +|+++++++|++.+.+++. +|+|+++
T Consensus       319 ~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          319 TFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             EECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             EEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            9999999999999999886 5999875

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=8.8e-53  Score=388.25  Aligned_cols=311  Identities=22%  Similarity=0.337  Sum_probs=263.9

Q ss_pred             CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|+.|+.....+.    ...+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|++|+|+
T Consensus        35 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~  114 (356)
T 1pl8_A           35 LLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSP  114 (356)
T ss_dssp             EEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCT
T ss_pred             EEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCC
Confidence            689999999999965432221    2357999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      +..+..            .         ....|+|+||+++|++.++++|+++++++||.+ .+++|||+++ +.+++++
T Consensus       115 ~~~~~g------------~---------~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta~~al-~~~~~~~  171 (356)
T 1pl8_A          115 SIFFCA------------T---------PPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVGIHAC-RRGGVTL  171 (356)
T ss_dssp             TCEETT------------B---------TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHHHHHH-HHHTCCT
T ss_pred             CccccC------------c---------CCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHHHHHH-HhcCCCC
Confidence            865421            0         012379999999999999999999999998865 6889999997 7789999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC-hhHHHHHHHHhcCCccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~-~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      |++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.+++++..+ .++.+.+++.+++++|++||++|
T Consensus       172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g  251 (356)
T 1pl8_A          172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTG  251 (356)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECCC
Confidence            99999999999999999999999998899999999999999999999999886311 34777888877678999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      ++..++.++++++++ |+++.+|.......++. ...+.+++++.|+...    ..++++++++++++++.+.++++++|
T Consensus       252 ~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~  325 (356)
T 1pl8_A          252 AEASIQAGIYATRSG-GTLVLVGLGSEMTTVPL-LHAAIREVDIKGVFRY----CNTWPVAISMLASKSVNVKPLVTHRF  325 (356)
T ss_dssp             CHHHHHHHHHHSCTT-CEEEECSCCCSCCCCCH-HHHHHTTCEEEECCSC----SSCHHHHHHHHHTTSCCCGGGEEEEE
T ss_pred             ChHHHHHHHHHhcCC-CEEEEEecCCCCCccCH-HHHHhcceEEEEeccc----HHHHHHHHHHHHcCCCChHHheEEEe
Confidence            977899999999998 99999997543322332 1234678888887543    25799999999999998888889999


Q ss_pred             cCCcHHHHHHHHhcCCcceEEEecC
Q 019414          316 PFSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                      +++++++|++.+.++..+|+|++++
T Consensus       326 ~l~~~~~A~~~~~~~~~gKvvi~~~  350 (356)
T 1pl8_A          326 PLEKALEAFETFKKGLGLKIMLKCD  350 (356)
T ss_dssp             EGGGHHHHHHHHHTTCCSEEEEECC
T ss_pred             cHHHHHHHHHHHhCCCceEEEEeCC
Confidence            9999999999998885569999885

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=7.3e-53  Score=388.28  Aligned_cols=315  Identities=22%  Similarity=0.310  Sum_probs=269.0

Q ss_pred             CccccccCCcCcceeee-ccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFG-FQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~-~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++++|+.|+... .......+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++++++.|....
T Consensus        28 lVkv~a~gi~~~D~~~~~~g~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~  107 (352)
T 3fpc_A           28 IVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGML  107 (352)
T ss_dssp             EEEEEEEECCHHHHHHHHSCTTCCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTT
T ss_pred             EEEeCEEeEcccchHHHhCCCCCCCCCcccCCcceEEEEEECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccc
Confidence            68999999999997623 33334468999999999999999999999999999999999999999999999999987642


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      ....                   .+...+|+|+||+++|+.  .++++|+++++++||.++++++|||+++ +.+++++|
T Consensus       108 ~~~~-------------------~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~al-~~~~~~~g  167 (352)
T 3fpc_A          108 AGWK-------------------FSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGA-ELANIKLG  167 (352)
T ss_dssp             TTBC-------------------BTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHHHHH-HHTTCCTT
T ss_pred             cccc-------------------cccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHHHHH-HhcCCCCC
Confidence            2100                   011234799999999976  8999999999999999999999999996 78899999


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      ++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++|+++.+  +.+.+++.+++ ++|++||++|+
T Consensus       168 ~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~~~~v~~~t~g~g~D~v~d~~g~  245 (352)
T 3fpc_A          168 DTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGD--IVEQILKATDGKGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSC--HHHHHHHHTTTCCEEEEEECSSC
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcC--HHHHHHHHcCCCCCCEEEECCCC
Confidence            9999999999999999999999998899999999999999999999999988776  99999999988 99999999999


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccce---eeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceee
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH  313 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  313 (341)
                      ++.++.++++++++ |+++.+|.......++.....   ..+++++.++.....  ..++++++++++++++.+.+++++
T Consensus       246 ~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~--~~~~~~~~~l~~~g~i~~~~~i~~  322 (352)
T 3fpc_A          246 VHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGG--RLRMERLIDLVFYKRVDPSKLVTH  322 (352)
T ss_dssp             TTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCH--HHHHHHHHHHHHTTSCCGGGGEEE
T ss_pred             hHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeeccCc--hhHHHHHHHHHHcCCCChhHhhee
Confidence            88999999999998 999999976544433333221   236778887654221  246899999999999999889999


Q ss_pred             eec-CCcHHHHHHHHhcCCc--ceEEEecC
Q 019414          314 RIP-FSEINKAFEYMVKGEG--LRCIISME  340 (341)
Q Consensus       314 ~~~-~~~i~ea~~~~~~~~~--~k~vl~~~  340 (341)
                      +|+ |+++++|++.+.+++.  +|+|++++
T Consensus       323 ~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          323 VFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             EEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             eCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            999 9999999999988653  69999874

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=3.4e-53  Score=389.21  Aligned_cols=310  Identities=26%  Similarity=0.348  Sum_probs=265.3

Q ss_pred             CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|+.|+.......    ...+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|++|+|+
T Consensus        29 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~  108 (343)
T 2dq4_A           29 LVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCL  108 (343)
T ss_dssp             EEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCT
T ss_pred             EEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCC
Confidence            689999999999966543322    2457999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      +.....                      ....|+|+||+++|++.++++|+++++++||.+ .++.|||+++.+.+++ +
T Consensus       109 ~~~~~g----------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~l~~~~~~-~  164 (343)
T 2dq4_A          109 NTQILG----------------------VDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHTVYAGSGV-S  164 (343)
T ss_dssp             TCEEBT----------------------TTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHHHHSTTCC-T
T ss_pred             Ccceec----------------------CCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHHHHHhCCC-C
Confidence            865421                      112479999999999999999999999998876 5788999998657889 9


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      |++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++ ++.++++++.+  +.+.+++.+++++|++||++|.
T Consensus       165 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~--~~~~~~~~~~~g~D~vid~~g~  241 (343)
T 2dq4_A          165 GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGN  241 (343)
T ss_dssp             TSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSC--HHHHHHHHHSSCEEEEEECSCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccC--HHHHHHHhcCCCCCEEEECCCC
Confidence            99999999999999999999999987899999999999999999 99999988765  8888888884499999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      ++.+++++++++++ |+++.+|.......++.....+.+++++.|+....  ..+++++++++++++++.+.++++++|+
T Consensus       242 ~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~  318 (343)
T 2dq4_A          242 EAAIHQGLMALIPG-GEARILGIPSDPIRFDLAGELVMRGITAFGIAGRR--LWQTWMQGTALVYSGRVDLSPLLTHRLP  318 (343)
T ss_dssp             HHHHHHHHHHEEEE-EEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCC--TTHHHHHHHHHHHHTSSCCGGGEEEEEE
T ss_pred             HHHHHHHHHHHhcC-CEEEEEecCCCCceeCcHHHHHhCceEEEEeecCC--CHHHHHHHHHHHHcCCCChHHheeEEec
Confidence            88899999999998 99999997554333332012356889998875431  2257899999999999888888899999


Q ss_pred             CCcHHHHHHHHhcCCcceEEEecC
Q 019414          317 FSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                      ++++++|++.+.+++.+|+|++++
T Consensus       319 l~~~~~A~~~~~~~~~gKvv~~~~  342 (343)
T 2dq4_A          319 LSRYREAFGLLASGQAVKVILDPK  342 (343)
T ss_dssp             GGGHHHHHHHHHHSSCSEEEEETT
T ss_pred             HHHHHHHHHHHhcCCceEEEEeeC
Confidence            999999999998887799999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.2e-52  Score=384.03  Aligned_cols=309  Identities=24%  Similarity=0.351  Sum_probs=262.7

Q ss_pred             CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|+.|+.....+.    ...+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|+++++|+|+
T Consensus        32 lVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~  111 (352)
T 1e3j_A           32 LLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCP  111 (352)
T ss_dssp             EEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCT
T ss_pred             EEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCC
Confidence            689999999999965433221    2357999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      +..+...                     ....|+|+||+++|++.++++|+++++++||.+ .+++|||+++ +.+++++
T Consensus       112 ~~~~~g~---------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~al-~~~~~~~  168 (352)
T 1e3j_A          112 DLTFCAT---------------------PPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLSVGVHAC-RRAGVQL  168 (352)
T ss_dssp             TCEETTB---------------------TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHHHHHHHH-HHHTCCT
T ss_pred             CCcccCc---------------------CCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHHHHHHHH-HhcCCCC
Confidence            8654210                     012479999999999999999999999998865 6889999997 7789999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhc----CCccEEE
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTN----GGVDRSV  231 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~----~~~d~vl  231 (341)
                      |++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++++ .+  +.+.+++.++    +++|++|
T Consensus       169 g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~--~~~~i~~~~~~~~g~g~D~vi  245 (352)
T 1e3j_A          169 GTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKE--EESSIIERIRSAIGDLPNVTI  245 (352)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCTTTS--CHHHHHHHHHHHSSSCCSEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCccccc--HHHHHHHHhccccCCCCCEEE
Confidence            9999999999999999999999999 6999999999999999999999998874 44  6777877775    4899999


Q ss_pred             eccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCce
Q 019414          232 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFI  311 (341)
Q Consensus       232 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  311 (341)
                      |++|.+..++.++++++++ |+++.+|.......++. ...+.+++++.++...    ..++++++++++++++.+.+++
T Consensus       246 d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~-~~~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i  319 (352)
T 1e3j_A          246 DCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTVPL-VNACAREIDIKSVFRY----CNDYPIALEMVASGRCNVKQLV  319 (352)
T ss_dssp             ECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCCCCCH-HHHHTTTCEEEECCSC----SSCHHHHHHHHHTTSCCCGGGE
T ss_pred             ECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCccccH-HHHHhcCcEEEEeccc----hHHHHHHHHHHHcCCCChHHhe
Confidence            9999977899999999998 99999997543322332 2234678888887543    3679999999999999888888


Q ss_pred             eeeecCCcHHHHHHHHhcCC--cceEEEecCC
Q 019414          312 THRIPFSEINKAFEYMVKGE--GLRCIISMED  341 (341)
Q Consensus       312 ~~~~~~~~i~ea~~~~~~~~--~~k~vl~~~~  341 (341)
                      +++|+++++++|++.+.+++  .+|+|+++++
T Consensus       320 ~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          320 THSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             EEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             eEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            99999999999999998886  4699998863

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.6e-52  Score=382.73  Aligned_cols=302  Identities=23%  Similarity=0.341  Sum_probs=258.2

Q ss_pred             CccccccCCcCcceeeeccCC----CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|+.|+.......    ...+|.++|||++|+|+++|++|++|++||||++++..+|+.|++|+++++|+|+
T Consensus        45 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~  124 (359)
T 1h2b_A           45 IVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCE  124 (359)
T ss_dssp             EEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCT
T ss_pred             EEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCC
Confidence            689999999999966543332    2368999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhh---hccccchhhhhhhhhh-c
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC---ILSCGVSTGLGATLNV-A  152 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa---~l~~~~~ta~~~l~~~-~  152 (341)
                      +....            |          ....|+|+||+++|++.++++|+++++++||   ++++++.|||+++.+. +
T Consensus       125 ~~~~~------------G----------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~  182 (359)
T 1h2b_A          125 NLEFP------------G----------LNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAAR  182 (359)
T ss_dssp             TCBCB------------T----------TTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHT
T ss_pred             Ccccc------------c----------cCCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhHHHHHHHHHhhcc
Confidence            76432            1          1124799999999999999999999999999   8888999999997665 8


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEE
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  230 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~v  230 (341)
                      ++++|++|||+|+|++|++++|+||.+ |+ +|++++++++|+++++++|+++++|+++.   +.+.+++++++ ++|++
T Consensus       183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~v~~~~~g~g~Dvv  258 (359)
T 1h2b_A          183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGADHVVDARRD---PVKQVMELTRGRGVNVA  258 (359)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEETTSC---HHHHHHHHTTTCCEEEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccch---HHHHHHHHhCCCCCcEE
Confidence            999999999999999999999999999 99 89999999999999999999999988753   77788888877 89999


Q ss_pred             EeccCChH--HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCC
Q 019414          231 VECTGNID--NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELE  308 (341)
Q Consensus       231 ld~~g~~~--~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~  308 (341)
                      ||++|++.  .++.++++  ++ |+++.+|..... .++.. ..+.+++++.|+.....   +++++++++++++++.+ 
T Consensus       259 id~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~~-~~~~~-~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~-  329 (359)
T 1h2b_A          259 MDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGEL-RFPTI-RVISSEVSFEGSLVGNY---VELHELVTLALQGKVRV-  329 (359)
T ss_dssp             EESSCCHHHHHHGGGGEE--EE-EEEEECCCSSCC-CCCHH-HHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSCCC-
T ss_pred             EECCCCchHHHHHHHhhc--CC-CEEEEEeCCCCC-CCCHH-HHHhCCcEEEEecCCCH---HHHHHHHHHHHcCCCcc-
Confidence            99999976  88888887  76 999999976543 33322 23468899988764432   57899999999998764 


Q ss_pred             CceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          309 KFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       309 ~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                       .+ ++|+|+++++|++.+.+++. +|+|+++
T Consensus       330 -~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          330 -EV-DIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             -CE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             -eE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence             46 99999999999999998885 6999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=2.2e-51  Score=376.44  Aligned_cols=306  Identities=27%  Similarity=0.442  Sum_probs=260.0

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|+.|+.......  ...+|.++|||++|+|+++|++|++|++||||++.+.. +|+.|++|+++++|+|++
T Consensus        29 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~  108 (339)
T 1rjw_A           29 LVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH  108 (339)
T ss_dssp             EEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTT
T ss_pred             EEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCC
Confidence            689999999999965433222  24679999999999999999999999999999987755 599999999999999987


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      .....                      ....|+|+||+++|++.++++|+++++++||++++++.|||+++.+ .++++|
T Consensus       109 ~~~~g----------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g  165 (339)
T 1rjw_A          109 QKNAG----------------------YSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKV-TGAKPG  165 (339)
T ss_dssp             CEEBT----------------------TTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHHH-HTCCTT
T ss_pred             cceee----------------------cCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCC
Confidence            64421                      1124799999999999999999999999999999999999999755 489999


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      ++|||+|+|++|++++|+|+..|+ +|+++++++++++.++++|++.++|+.+.+  +.+.+++.+ +++|++||++|.+
T Consensus       166 ~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~--~~~~~~~~~-~~~d~vid~~g~~  241 (339)
T 1rjw_A          166 EWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLKED--AAKFMKEKV-GGVHAAVVTAVSK  241 (339)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTTSC--HHHHHHHHH-SSEEEEEESSCCH
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCCcc--HHHHHHHHh-CCCCEEEECCCCH
Confidence            999999998899999999999999 999999999999999999999999887655  788888877 6899999999988


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF  317 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  317 (341)
                      ..++.++++++++ |+++.+|.......++. ...+.+++++.|+.....   +++++++++++++++.+.   +++|++
T Consensus       242 ~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~---~~~~~l  313 (339)
T 1rjw_A          242 PAFQSAYNSIRRG-GACVLVGLPPEEMPIPI-FDTVLNGIKIIGSIVGTR---KDLQEALQFAAEGKVKTI---IEVQPL  313 (339)
T ss_dssp             HHHHHHHHHEEEE-EEEEECCCCSSEEEEEH-HHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSCCCC---EEEEEG
T ss_pred             HHHHHHHHHhhcC-CEEEEecccCCCCccCH-HHHHhCCcEEEEeccCCH---HHHHHHHHHHHcCCCCcc---EEEEcH
Confidence            8999999999998 99999997654322222 122457889888764432   578999999999988764   589999


Q ss_pred             CcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          318 SEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       318 ~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      +++++|++.+.+++. +|+|+++++
T Consensus       314 ~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          314 EKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             GGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999988874 699999864

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=2.5e-52  Score=390.76  Aligned_cols=321  Identities=20%  Similarity=0.258  Sum_probs=262.6

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|+.|+..........+|.++|||++|+|+++|++|++|++||||++.+..+||.|++|++|++|+|++...
T Consensus        36 lVkv~a~gic~~D~~~~~G~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~  115 (398)
T 2dph_A           36 ILKVVSTNICGSDQHIYRGRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLV  115 (398)
T ss_dssp             EEEEEEEECCHHHHHHHTTSSCCCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTT
T ss_pred             EEEEEEEeecHHHHHHhcCCCCCCCCcccCCceEEEEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccc
Confidence            68999999999997665443345679999999999999999999999999999999999999999999999999987211


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchh----hhhccccchhhhhhhhhhcCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDK----VCILSCGVSTGLGATLNVAKP  154 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~~~  154 (341)
                      .+..    .....|+..       ....|+|+||++++++  .++++|+++++++    ||++++++.|||+++ +.+++
T Consensus       116 ~~~~----~~~~~G~~~-------~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~  183 (398)
T 2dph_A          116 NPDA----DLGAFGFDL-------KGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGV  183 (398)
T ss_dssp             CSSS----SCCBTTTTB-------SSCCCSSBSEEEESSHHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTC
T ss_pred             cccc----ccccccccc-------CCCCceeeeeEEeccccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCC
Confidence            1000    000011100       0124799999999987  8999999999998    899999999999997 77899


Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhH-HHHHHHHhcC-CccEEEe
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI-QEVIAEMTNG-GVDRSVE  232 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~-~~~i~~~~~~-~~d~vld  232 (341)
                      ++|++|||+|+|++|++++|+||.+|+.+|++++++++++++++++|++ ++|+.+.+  + .+.+++.+++ ++|+|||
T Consensus       184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~~~--~~~~~~~~~~~g~g~Dvvid  260 (398)
T 2dph_A          184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TIDLRNSA--PLRDQIDQILGKPEVDCGVD  260 (398)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEETTSSS--CHHHHHHHHHSSSCEEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEcCCCcc--hHHHHHHHHhCCCCCCEEEE
Confidence            9999999999999999999999999998899999999999999999996 78887654  5 7888888887 8999999


Q ss_pred             ccCChH--------------HHHHHHHHhcCCCcEEEEEccCCC-----------Cccccccc-ceeeecceEEEeeecC
Q 019414          233 CTGNID--------------NMISAFECVHDGWGVAVLVGVPSK-----------DAVFMTKP-INVLNERTLKGTFFGN  286 (341)
Q Consensus       233 ~~g~~~--------------~~~~~~~~l~~~~g~~v~~g~~~~-----------~~~~~~~~-~~~~~~~~~~g~~~~~  286 (341)
                      ++|+..              .+++++++++++ |+++.+|....           .....+.. ..+.+++++.++....
T Consensus       261 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~  339 (398)
T 2dph_A          261 AVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIPGIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV  339 (398)
T ss_dssp             CSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECCSCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG
T ss_pred             CCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEeccccccccccccccccCCcccccHHHHhhcCCEEEEeccCc
Confidence            999742              689999999998 99999997521           11111111 2245788887754322


Q ss_pred             CCCCCCHHHHHHHHHCCCCC--CCCceeeeecCCcHHHHHHHHhcCCcceEEEecC
Q 019414          287 YKPRTDLPSVVDMYMNKQLE--LEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                         .++++++++++++|++.  +.++++++|+|+++++|++.+.+++.+|+|++++
T Consensus       340 ---~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvv~~~  392 (398)
T 2dph_A          340 ---TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVIDPH  392 (398)
T ss_dssp             ---GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCSCEEEECTT
T ss_pred             ---HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCceEEEEecC
Confidence               25799999999999998  7667889999999999999998887799999875

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=8.2e-52  Score=387.85  Aligned_cols=308  Identities=21%  Similarity=0.310  Sum_probs=263.2

Q ss_pred             CccccccCCcCcceeeeccC--------CCCCCCccccccceEEEEEecCCC------CCCCCCCEEEecccCCCCCChh
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--------QTPLFPRIFGHEAAGVVESVGEGV------SDLEVGDHVLPVFTGECGDCRH   66 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--------~~~~~p~i~G~e~~G~V~~vG~~v------~~~~~Gd~V~~~~~~~c~~c~~   66 (341)
                      |||++++|+|+.|+......        ....+|.++|||++|+|+++|++|      ++|++||||++.+..+|+.|++
T Consensus        59 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~  138 (404)
T 3ip1_A           59 IIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRP  138 (404)
T ss_dssp             EEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHH
T ss_pred             EEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCCCCCEEEECCccCCCCCHH
Confidence            68999999999997654321        123689999999999999999999      8999999999999999999999


Q ss_pred             hcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCC------chhhhhcccc
Q 019414           67 CRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP------LDKVCILSCG  140 (341)
Q Consensus        67 c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~------~~~aa~l~~~  140 (341)
                      |++|++|+|++.....                      ....|+|+||+++|++.++++|++++      ..++|+++++
T Consensus       139 C~~g~~~~C~~~~~~g----------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~  196 (404)
T 3ip1_A          139 CAEGFPNHCENLNELG----------------------FNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEP  196 (404)
T ss_dssp             HHTTCGGGCTTCEEBT----------------------TTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHH
T ss_pred             HHCcCcccCccccccC----------------------CCCCCCCcceEEechHHeEeccccccccccccchhHHhhhhH
Confidence            9999999999875531                      12247999999999999999999886      3558899999


Q ss_pred             chhhhhhhhhh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHH
Q 019414          141 VSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI  219 (341)
Q Consensus       141 ~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i  219 (341)
                      ++|||+++... +++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++++.+  +.+.+
T Consensus       197 ~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~~~~i  274 (404)
T 3ip1_A          197 TSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKEN--FVEAV  274 (404)
T ss_dssp             HHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSC--HHHHH
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCC--HHHHH
Confidence            99999998655 4899999999999999999999999999998999999999999999999999999998776  99999


Q ss_pred             HHHhcC-CccEEEeccCCh-HHHHHHHHHh----cCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCH
Q 019414          220 AEMTNG-GVDRSVECTGNI-DNMISAFECV----HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDL  293 (341)
Q Consensus       220 ~~~~~~-~~d~vld~~g~~-~~~~~~~~~l----~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  293 (341)
                      ++.+++ ++|++|||+|++ ..++.+++++    +++ |+++.+|.......++.. ..+.+++++.|+....  ...++
T Consensus       275 ~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~--~~~~~  350 (404)
T 3ip1_A          275 LDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVARADAKIPLTGE-VFQVRRAQIVGSQGHS--GHGTF  350 (404)
T ss_dssp             HHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSCCCSCEEECHH-HHHHTTCEEEECCCCC--STTHH
T ss_pred             HHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCCCCCCCcccHH-HHhccceEEEEecCCC--chHHH
Confidence            999988 999999999996 3677777888    998 999999987655444332 2356889998876432  12579


Q ss_pred             HHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCcceEEEecC
Q 019414          294 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       294 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                      +++++++++| +.+.++++++|+|+++++|++.+..   +|+|++++
T Consensus       351 ~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~~---GKvvl~~~  393 (404)
T 3ip1_A          351 PRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQT---DKSLVKVT  393 (404)
T ss_dssp             HHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTTT---CTTCSCEE
T ss_pred             HHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHhC---CcEEEecC
Confidence            9999999999 9988889999999999999999973   46666654

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=1.5e-51  Score=379.02  Aligned_cols=308  Identities=22%  Similarity=0.328  Sum_probs=269.0

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|+.........++|.++|||++|+|+++|++|++|++||||++.+.. .|+.|++|..+.++.|....
T Consensus        30 LVkv~a~gic~~D~~~~~G~~~~~~p~i~GhE~aG~V~~vG~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~  109 (348)
T 4eez_A           30 LLDMEYCGVCHTDLHVAAGDFGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVK  109 (348)
T ss_dssp             EEEEEEEECCHHHHHHHTTTTCCCTTCBCCSEEEEEEEEECTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCE
T ss_pred             EEEEEEEEECHHHHHHhcCCCCCCCCcccceeEEEEEEEECceeeecccCCeEeecccccccCccccccCCccccccccc
Confidence            68999999999997665555556789999999999999999999999999999887665 68999999999999999876


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      ...                      ...+|+|+||+.++++.++++|+++++++||++++++.|||+++ +..++++|++
T Consensus       110 ~~~----------------------~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~  166 (348)
T 4eez_A          110 NAG----------------------YSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAI-KVSGVKPGDW  166 (348)
T ss_dssp             EBT----------------------TTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHH-HHHTCCTTCE
T ss_pred             ccc----------------------cccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeee-cccCCCCCCE
Confidence            531                      22347999999999999999999999999999999999999985 6778999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID  238 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~  238 (341)
                      |||+|+|++|.+++|+|+.++..+|++++++++|+++++++|++.++|+.+.+  +.+++++.+++ ++|.++|+++++.
T Consensus       167 VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~--~~~~v~~~t~g~g~d~~~~~~~~~~  244 (348)
T 4eez_A          167 QVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVN--PVDEIKKITGGLGVQSAIVCAVARI  244 (348)
T ss_dssp             EEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCC--HHHHHHHHTTSSCEEEEEECCSCHH
T ss_pred             EEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCC--HHHHhhhhcCCCCceEEEEeccCcc
Confidence            99999999999999999987555999999999999999999999999998877  89999999998 9999999999989


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCC
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFS  318 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  318 (341)
                      .+++++++++++ |+++.+|.......++.. ..+.+++++.|+..+..   .+++++++++++|++++   ++++|+|+
T Consensus       245 ~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~i~gs~~~~~---~~~~~~~~l~~~g~i~p---~~~~~~l~  316 (348)
T 4eez_A          245 AFEQAVASLKPM-GKMVAVAVPNTEMTLSVP-TVVFDGVEVAGSLVGTR---LDLAEAFQFGAEGKVKP---IVATRKLE  316 (348)
T ss_dssp             HHHHHHHTEEEE-EEEEECCCCSCEEEECHH-HHHHSCCEEEECCSCCH---HHHHHHHHHHHTTSCCC---CEEEECGG
T ss_pred             hhheeheeecCC-ceEEEEeccCCCCccCHH-HHHhCCeEEEEEecCCH---HHHHHHHHHHHcCCCEE---EEEEEeHH
Confidence            999999999998 999999976655444432 33568999998876543   57999999999998864   35899999


Q ss_pred             cHHHHHHHHhcCCc-ceEEEecCC
Q 019414          319 EINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       319 ~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      ++++|++.+++++. +|+||+|++
T Consensus       317 ~~~~A~~~l~~g~~~GKvVl~~sk  340 (348)
T 4eez_A          317 EINDIIDEMKAGKIEGRMVIDFTK  340 (348)
T ss_dssp             GHHHHHHHHHTTCCSSEEEEECC-
T ss_pred             HHHHHHHHHHCCCCccEEEEEccc
Confidence            99999999999986 599999873

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=4.8e-51  Score=374.88  Aligned_cols=306  Identities=20%  Similarity=0.331  Sum_probs=262.1

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+........  ..+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|++|+|++.
T Consensus        31 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~  110 (343)
T 2eih_A           31 RVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRY  110 (343)
T ss_dssp             EEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTC
T ss_pred             EEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccc
Confidence            6899999999999665433222  36799999999999999999999999999999999999999999999999999986


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      ...            |          ....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|+
T Consensus       111 ~~~------------G----------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~  168 (343)
T 2eih_A          111 QIL------------G----------EHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGD  168 (343)
T ss_dssp             EET------------T----------TSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTTTSCCCTTC
T ss_pred             ccc------------C----------cCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHHhcCCCCCC
Confidence            542            1          112379999999999999999999999999999999999999987768999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++|+.+.+  +.+.+++.+++ ++|++||++| 
T Consensus       169 ~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~--~~~~~~~~~~~~~~d~vi~~~g-  244 (343)
T 2eih_A          169 DVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTHPD--WPKEVRRLTGGKGADKVVDHTG-  244 (343)
T ss_dssp             EEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTSTT--HHHHHHHHTTTTCEEEEEESSC-
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCccc--HHHHHHHHhCCCCceEEEECCC-
Confidence            9999997 9999999999999999 899999999999999999999888887655  88888888876 8999999999 


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      .+.++.++++++++ |+++.+|...... .++. ...+.+++++.|+....   .+++++++++++++++.  +.++++|
T Consensus       245 ~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~  317 (343)
T 2eih_A          245 ALYFEGVIKATANG-GRIAIAGASSGYEGTLPF-AHVFYRQLSILGSTMAS---KSRLFPILRFVEEGKLK--PVVGQVL  317 (343)
T ss_dssp             SSSHHHHHHHEEEE-EEEEESSCCCSCCCCCCT-THHHHTTCEEEECCSCC---GGGHHHHHHHHHHTSSC--CCEEEEE
T ss_pred             HHHHHHHHHhhccC-CEEEEEecCCCCcCccCH-HHHHhCCcEEEEecCcc---HHHHHHHHHHHHcCCCC--CceeEEe
Confidence            57899999999998 9999999765432 1222 22346888888875322   25799999999999875  4578999


Q ss_pred             cCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          316 PFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +|+++++|++.+.+++. +|+|+++
T Consensus       318 ~l~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          318 PLEAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             EGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEec
Confidence            99999999999988775 6999876

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.8e-51  Score=382.57  Aligned_cols=317  Identities=26%  Similarity=0.359  Sum_probs=260.1

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCC------CCCCCCEEEecccCCCCCChhhc-CCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCR-SDVS   72 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~c~~c~~c~-~~~~   72 (341)
                      |||++++|+|+.|+........ ..+|.++|||++|+|+++| +|+      +|++||||++.+..+|+.|++|+ ++++
T Consensus        46 lVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~  124 (380)
T 1vj0_A           46 LVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEP  124 (380)
T ss_dssp             EEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCG
T ss_pred             EEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCc
Confidence            6899999999999665433222 3679999999999999999 999      99999999999999999999999 9999


Q ss_pred             CCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEe-ecCceEECCCCCCch-hhhhccccchhhhhhhhh
Q 019414           73 NMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLD-KVCILSCGVSTGLGATLN  150 (341)
Q Consensus        73 ~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v-~~~~~~~lp~~~~~~-~aa~l~~~~~ta~~~l~~  150 (341)
                      |+|++.....   ....        ++.   .....|+|+||+++ |++.++++|++++++ +||.+ ++++|||+++ +
T Consensus       125 ~~C~~~~~~g---~~~~--------~~~---~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~Aa~~-~~~~ta~~al-~  188 (380)
T 1vj0_A          125 YLCPNRKVYG---INRG--------CSE---YPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAM-CSGATAYHAF-D  188 (380)
T ss_dssp             GGCTTCEETT---TTCC--------SSS---TTCCCSSSBSEEEECTTCCEEEECTTSCHHHHHHHT-THHHHHHHHH-H
T ss_pred             ccCCCcceec---cccc--------cCC---CCCCCccccceEEEcccceEEECCCCCChHHhHhhh-cHHHHHHHHH-H
Confidence            9999864421   0000        000   00124799999999 999999999999999 55554 5999999997 5


Q ss_pred             hcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC-ChhHHHHHHHHhcC-Cc
Q 019414          151 VAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH-DRPIQEVIAEMTNG-GV  227 (341)
Q Consensus       151 ~~~-~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~i~~~~~~-~~  227 (341)
                      ..+ +++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++.+++++.. +.++.+.+++.+++ ++
T Consensus       189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~  268 (380)
T 1vj0_A          189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGA  268 (380)
T ss_dssp             TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred             hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCC
Confidence            678 9999999999999999999999999995499999999999999999999999987610 22378889998887 89


Q ss_pred             cEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC-C-CcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHC--C
Q 019414          228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-K-DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMN--K  303 (341)
Q Consensus       228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~-~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~  303 (341)
                      |+|||++|.++.++.++++++++ |+++.+|... . ...++.....+.+++++.|+.....   ++++++++++++  +
T Consensus       269 Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~~~g  344 (380)
T 1vj0_A          269 DFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDT---SHFVKTVSITSRNYQ  344 (380)
T ss_dssp             EEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCH---HHHHHHHHHHHTCHH
T ss_pred             cEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCCH---HHHHHHHHHHHhhcC
Confidence            99999999878899999999998 9999999765 3 3333322213568899998765432   578999999999  9


Q ss_pred             CCCCCCceeeeecCCcHHHHHHHHhcCCcceEEEecC
Q 019414          304 QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       304 ~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                      ++  .++++++|+|+++++|++.+.+++..|+|++++
T Consensus       345 ~l--~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvl~~~  379 (380)
T 1vj0_A          345 LL--SKLITHRLPLKEANKALELMESREALKVILYPE  379 (380)
T ss_dssp             HH--GGGCCEEEEGGGHHHHHHHHHHTSCSCEEEECC
T ss_pred             Ce--eeEEEEEEeHHHHHHHHHHHhcCCCceEEEEeC
Confidence            77  566789999999999999998876449999875

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=3.1e-51  Score=376.84  Aligned_cols=306  Identities=22%  Similarity=0.354  Sum_probs=251.4

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+........ ..+|.++|||++|+|+++|++|++|++||||++.+. .+|+.|++|++|++|+|. .
T Consensus        33 lVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~  111 (348)
T 3two_A           33 LIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-K  111 (348)
T ss_dssp             EEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCT-T
T ss_pred             EEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCc-c
Confidence            6899999999999765443332 468999999999999999999999999999998654 689999999999999998 3


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .......       ......|     ....|+|+||+++|++.++++|+++++++||++++++.|||+++. ..++++|+
T Consensus       112 ~~~~~~~-------~~~~~~~-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~  178 (348)
T 3two_A          112 VVFTYDC-------LDSFHDN-----EPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLK-FSKVTKGT  178 (348)
T ss_dssp             CEESSSS-------EEGGGTT-----EECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHHH-HTTCCTTC
T ss_pred             ccccccc-------ccccccC-----CcCCccccceEEechhhEEECCCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCC
Confidence            2211000       0000011     112379999999999999999999999999999999999999975 56999999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++ . +.+  .   +    ..++|++||++|++.
T Consensus       179 ~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~-~~~--~---~----~~~~D~vid~~g~~~  246 (348)
T 3two_A          179 KVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T-DPK--Q---C----KEELDFIISTIPTHY  246 (348)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S-SGG--G---C----CSCEEEEEECCCSCC
T ss_pred             EEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C-CHH--H---H----hcCCCEEEECCCcHH
Confidence            99999999999999999999999 899999999999999999999988 2 211  1   1    127999999999976


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCC-CCcc-ccccccee-eecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          239 NMISAFECVHDGWGVAVLVGVPS-KDAV-FMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~-~~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      .+++++++++++ |+++.+|... .... ++.. ..+ .+++++.|+.....   +++++++++++++++.+.   +++|
T Consensus       247 ~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~---~~~~  318 (348)
T 3two_A          247 DLKDYLKLLTYN-GDLALVGLPPVEVAPVLSVF-DFIHLGNRKVYGSLIGGI---KETQEMVDFSIKHNIYPE---IDLI  318 (348)
T ss_dssp             CHHHHHTTEEEE-EEEEECCCCCGGGCCEEEHH-HHHHTCSCEEEECCSCCH---HHHHHHHHHHHHTTCCCC---EEEE
T ss_pred             HHHHHHHHHhcC-CEEEEECCCCCCCcccCCHH-HHHhhCCeEEEEEecCCH---HHHHHHHHHHHhCCCCce---EEEE
Confidence            999999999998 9999999765 3322 2222 224 68999998876544   579999999999988763   4899


Q ss_pred             cCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          316 PFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      +++++++|++.+.+++. +|+|++++
T Consensus       319 ~l~~~~~A~~~~~~~~~~gKvVi~~~  344 (348)
T 3two_A          319 LGKDIDTAYHNLTHGKAKFRYVIDMK  344 (348)
T ss_dssp             CGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred             EHHHHHHHHHHHHcCCCceEEEEecC
Confidence            99999999999999886 69999986

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.7e-51  Score=382.29  Aligned_cols=321  Identities=22%  Similarity=0.264  Sum_probs=258.3

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|+.|+..........+|.++|||++|+|+++|++|++|++||||++.+..+|+.|++|++|++|+|+....
T Consensus        37 lVkv~a~gi~~~D~~~~~g~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~  116 (398)
T 1kol_A           37 ILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNP  116 (398)
T ss_dssp             EEEEEEEECCHHHHHHHTTCSCCCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCS
T ss_pred             EEEEEEEeechhhHHHHcCCCCCCCCcccCcccEEEEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCccc
Confidence            68999999999996654433334578999999999999999999999999999999989999999999999999997642


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecC--ceEECCCCCCchh----hhhccccchhhhhhhhhhcCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLAPLDK----VCILSCGVSTGLGATLNVAKP  154 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~--~~~~lp~~~~~~~----aa~l~~~~~ta~~~l~~~~~~  154 (341)
                      ....      +..|+...      ....|+|+||+++|++  .++++|+++++++    +|++++++.|||+++. .+++
T Consensus       117 ~~~~------~~~g~~~~------~~~~G~~aey~~v~~~~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~  183 (398)
T 1kol_A          117 ARAG------GAYGYVDM------GDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGV  183 (398)
T ss_dssp             SSSC------EEBTCTTS------CCBCCCSBSEEEESSHHHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTC
T ss_pred             cccc------ceeeeccC------CCCCceeeeEEEecchhCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCC
Confidence            1100      00111000      0123799999999986  8999999999887    7899999999999975 7899


Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~  233 (341)
                      ++|++|||+|+|++|++++|+||.+|+++|++++++++|+++++++|++ ++++.+.+ .+.+.+++.+++ ++|+|||+
T Consensus       184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~~~~~-~~~~~v~~~t~g~g~Dvvid~  261 (398)
T 1kol_A          184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IADLSLDT-PLHEQIAALLGEPEVDCAVDA  261 (398)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEETTSSS-CHHHHHHHHHSSSCEEEEEEC
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEccCCcc-hHHHHHHHHhCCCCCCEEEEC
Confidence            9999999999999999999999999998899999999999999999997 77776432 277888888887 89999999


Q ss_pred             cCCh---------------HHHHHHHHHhcCCCcEEEEEccCC-CCc----------ccccc-cceeeecceEEEeeecC
Q 019414          234 TGNI---------------DNMISAFECVHDGWGVAVLVGVPS-KDA----------VFMTK-PINVLNERTLKGTFFGN  286 (341)
Q Consensus       234 ~g~~---------------~~~~~~~~~l~~~~g~~v~~g~~~-~~~----------~~~~~-~~~~~~~~~~~g~~~~~  286 (341)
                      +|+.               ..+++++++++++ |+++.+|... ...          .+.+. ...+.+++++.++... 
T Consensus       262 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-  339 (398)
T 1kol_A          262 VGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP-  339 (398)
T ss_dssp             CCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC-
T ss_pred             CCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEeccccCCcccccccccccccccccHHHHhhcccEEEecccC-
Confidence            9975               2789999999998 9999999652 111          01111 1124577787764321 


Q ss_pred             CCCCCCHHHHHHHHHCCCCC-CCCceeeeecCCcHHHHHHHHhcCCcceEEEecC
Q 019414          287 YKPRTDLPSVVDMYMNKQLE-LEKFITHRIPFSEINKAFEYMVKGEGLRCIISME  340 (341)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~~  340 (341)
                        ..+.++++++++.+|++. ..++++++|+|+++++|++.+.+++.+|+|++++
T Consensus       340 --~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~  392 (398)
T 1kol_A          340 --VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVIDPH  392 (398)
T ss_dssp             --HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCSCEEEECTT
T ss_pred             --hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCceEEEEEeC
Confidence              114578899999999887 3456789999999999999998887799999875

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=2.6e-50  Score=370.08  Aligned_cols=301  Identities=24%  Similarity=0.332  Sum_probs=238.3

Q ss_pred             CccccccCCcCcceeeeccCCC---CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT---PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|+.|+........   ..+|.++|||++|+|+++|++ ++|++||||+..+..+|+.|++|+++++|+|.+
T Consensus        32 lVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~  110 (344)
T 2h6e_A           32 LIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKN  110 (344)
T ss_dssp             EEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTT
T ss_pred             EEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCC
Confidence            6899999999999665433322   367999999999999999999 999999999999989999999999999999987


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEee-cCceEECCCCCCchhhhhccccchhhhhhhhhh----c
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKINPLAPLDKVCILSCGVSTGLGATLNV----A  152 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~-~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~----~  152 (341)
                      .....                      ....|+|+||+++| ++.++++ +++++++||++++++.|||+++.+.    .
T Consensus       111 ~~~~G----------------------~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~~~~~~~~  167 (344)
T 2h6e_A          111 QIIPG----------------------QTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIRQALPFIS  167 (344)
T ss_dssp             CBCBT----------------------TTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHHHHHHHHT
T ss_pred             ccccc----------------------cccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHHhhhhccc
Confidence            64321                      11247999999999 9999999 9999999999999999999997654    2


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccE
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR  229 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~--g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~  229 (341)
                      ++ +|++|||+|+|++|++++|+||.+  |+ +|++++++++++++++++|++.++|+++.    .+.+.+++.+ ++|+
T Consensus       168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~----~~~~~~~~~g~g~D~  241 (344)
T 2h6e_A          168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDA----ESLINKLTDGLGASI  241 (344)
T ss_dssp             TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHH----HHHHHHHHTTCCEEE
T ss_pred             CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccc----hHHHHHhhcCCCccE
Confidence            88 999999999999999999999999  99 89999999999999999999999876530    1223445555 8999


Q ss_pred             EEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCC
Q 019414          230 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEK  309 (341)
Q Consensus       230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~  309 (341)
                      |||++|.+..++.++++++++ |+++.+|.......++.. ..+.+++++.|+.....   +++++++++++++++.+. 
T Consensus       242 vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~~~-  315 (344)
T 2h6e_A          242 AIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKRVSLEAF-DTAVWNKKLLGSNYGSL---NDLEDVVRLSESGKIKPY-  315 (344)
T ss_dssp             EEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSCCCCCHH-HHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSCCC-
T ss_pred             EEECCCChHHHHHHHHHhhcC-CEEEEeCCCCCCcccCHH-HHhhCCcEEEEEecCCH---HHHHHHHHHHHcCCCCcc-
Confidence            999999977999999999998 999999976543323221 23468899988764432   578999999999987654 


Q ss_pred             ceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          310 FITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       310 ~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                       + ++|+|+++++|++.+.+++. +|+|+++
T Consensus       316 -i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          316 -I-IKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             -E-EEECC----------------CEEEECC
T ss_pred             -e-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence             6 99999999999999988875 6999864

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-50  Score=375.32  Aligned_cols=309  Identities=22%  Similarity=0.309  Sum_probs=251.3

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+....... ...+|.++|||++|+|+++|++|++|++||||++.+.. +|+.|++|++|++|+|++.
T Consensus        51 lVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~  130 (369)
T 1uuf_A           51 KIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHM  130 (369)
T ss_dssp             EEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTC
T ss_pred             EEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcch
Confidence            689999999999976543322 23579999999999999999999999999999998765 6999999999999999975


Q ss_pred             c--ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCC-CCchhhhhccccchhhhhhhhhhcCCC
Q 019414           79 R--INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL-APLDKVCILSCGVSTGLGATLNVAKPE  155 (341)
Q Consensus        79 ~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~-~~~~~aa~l~~~~~ta~~~l~~~~~~~  155 (341)
                      .  +....           +..|     ....|+|+||+++|++.++++|++ +++++||++++++.|||+++.+ .+++
T Consensus       131 ~~~~~~~~-----------~~~g-----~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~-~~~~  193 (369)
T 1uuf_A          131 TGTYNSPT-----------PDEP-----GHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAG  193 (369)
T ss_dssp             EETTTSBC-----------SSTT-----SBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTHHHHHHHHHHH-TTCC
T ss_pred             hccccccc-----------ccCC-----CCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhhHHHHHHHHHh-cCCC
Confidence            2  11000           0001     112479999999999999999999 9999999999999999999765 6899


Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++|+.+.+  +.+   +.. +++|++||++|
T Consensus       194 ~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~--~~~---~~~-~g~Dvvid~~g  266 (369)
T 1uuf_A          194 PGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRNAD--EMA---AHL-KSFDFILNTVA  266 (369)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTCHH--HHH---TTT-TCEEEEEECCS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEeccccHH--HHH---Hhh-cCCCEEEECCC
Confidence            99999999999999999999999999 799999999999999999999999886532  332   222 58999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      .+..++.++++++++ |+++.+|...... .++. ...+.+++++.|+.....   +++++++++++++++.+.   ++.
T Consensus       267 ~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~i~~~---i~~  338 (369)
T 1uuf_A          267 APHNLDDFTTLLKRD-GTMTLVGAPATPHKSPEV-FNLIMKRRAIAGSMIGGI---PETQEMLDFCAEHGIVAD---IEM  338 (369)
T ss_dssp             SCCCHHHHHTTEEEE-EEEEECCCC-------CH-HHHHTTTCEEEECCSCCH---HHHHHHHHHHHHHTCCCC---EEE
T ss_pred             CHHHHHHHHHHhccC-CEEEEeccCCCCccccCH-HHHHhCCcEEEEeecCCH---HHHHHHHHHHHhCCCCcc---eEE
Confidence            867899999999998 9999999765332 2222 123468889988765432   568999999999988654   367


Q ss_pred             ecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          315 IPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      |+++++++|++.+.+++. +|+|+++++
T Consensus       339 ~~l~~~~~A~~~~~~~~~~gKvvi~~~~  366 (369)
T 1uuf_A          339 IRADQINEAYERMLRGDVKYRFVIDNRT  366 (369)
T ss_dssp             ECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred             EcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999999988875 699998863

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-49  Score=366.43  Aligned_cols=307  Identities=22%  Similarity=0.338  Sum_probs=258.3

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|+.|+.......  ...+|.++|||++|+|+++|++|++|++||||++.+.. +|+.|++|+++++|+|++
T Consensus        34 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~  113 (347)
T 2hcy_A           34 LINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPH  113 (347)
T ss_dssp             EEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTT
T ss_pred             EEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCcc
Confidence            689999999999965433222  24679999999999999999999999999999987655 599999999999999997


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      .....                      ....|+|+||+++|++.++++|+++++++||++++++.|||+++.+ .++++|
T Consensus       114 ~~~~g----------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g  170 (347)
T 2hcy_A          114 ADLSG----------------------YTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKS-ANLMAG  170 (347)
T ss_dssp             CEEBT----------------------TTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHHT-TTCCTT
T ss_pred             ccccc----------------------cCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHHh-cCCCCC
Confidence            64421                      1124799999999999999999999999999999999999999754 589999


Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhcCCccEEEeccC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      ++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++|+.+ .+  +.+.+++.+.+++|++||++|
T Consensus       171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~--~~~~~~~~~~~~~D~vi~~~g  247 (347)
T 2hcy_A          171 HWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTKEKD--IVGAVLKATDGGAHGVINVSV  247 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTTCSC--HHHHHHHHHTSCEEEEEECSS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCccHh--HHHHHHHHhCCCCCEEEECCC
Confidence            99999997 9999999999999999 9999999999999999999998888763 34  777888877668999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeee
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHR  314 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  314 (341)
                      ....++.++++++++ |+++.+|..... ..++. ...+.+++++.|+.....   +++++++++++++++.+.   +++
T Consensus       248 ~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~---~~~  319 (347)
T 2hcy_A          248 SEAAIEASTRYVRAN-GTTVLVGMPAGAKCCSDV-FNQVVKSISIVGSYVGNR---ADTREALDFFARGLVKSP---IKV  319 (347)
T ss_dssp             CHHHHHHHTTSEEEE-EEEEECCCCTTCEEEEEH-HHHHHTTCEEEECCCCCH---HHHHHHHHHHHTTSCCCC---EEE
T ss_pred             cHHHHHHHHHHHhcC-CEEEEEeCCCCCCCCCCH-HHHhhCCcEEEEccCCCH---HHHHHHHHHHHhCCCccc---eEE
Confidence            878999999999998 999999976532 12221 122458899988765432   578999999999988764   579


Q ss_pred             ecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          315 IPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       315 ~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      |+++++++|++.+.+++. +|+|+++++
T Consensus       320 ~~l~~~~~A~~~~~~~~~~gKvvv~~~~  347 (347)
T 2hcy_A          320 VGLSTLPEIYEKMEKGQIVGRYVVDTSK  347 (347)
T ss_dssp             EEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred             EcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence            999999999999988874 699998864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=9.6e-50  Score=366.78  Aligned_cols=304  Identities=23%  Similarity=0.310  Sum_probs=259.3

Q ss_pred             CccccccCCcCcceeeeccCC---------CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ---------TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDV   71 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~---------~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~   71 (341)
                      |||++++|+|+.|+.......         ...+|.++|||++|+|+++|++|++|++||||++++..+|+.|++|++++
T Consensus        29 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~  108 (347)
T 1jvb_A           29 LIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGE  108 (347)
T ss_dssp             EEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTC
T ss_pred             EEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcC
Confidence            689999999999966533221         23679999999999999999999999999999999889999999999999


Q ss_pred             CCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeec-CceEECCCCCCchhhhhccccchhhhhhhhh
Q 019414           72 SNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCVAKINPLAPLDKVCILSCGVSTGLGATLN  150 (341)
Q Consensus        72 ~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~-~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~  150 (341)
                      +|+|++....            |          ....|+|+||+++|+ +.++++ +++++++||++++++.|||+++. 
T Consensus       109 ~~~C~~~~~~------------G----------~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~l~-  164 (347)
T 1jvb_A          109 EHLCDSPRWL------------G----------INFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAVR-  164 (347)
T ss_dssp             GGGCSSCEEB------------T----------TTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHHHH-
T ss_pred             cccCcccccc------------c----------ccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHHHHHHHH-
Confidence            9999976432            1          112479999999999 999999 99999999999999999999974 


Q ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhc-CCc
Q 019414          151 VAKPERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGV  227 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~-~~~  227 (341)
                      .+++++|++|||+|+ |++|++++|+++.. |+ +|+++++++++++.++++|++.++++.+.+  +.+.+.+.+. +++
T Consensus       165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~  241 (347)
T 1jvb_A          165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASMQD--PLAEIRRITESKGV  241 (347)
T ss_dssp             HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTSCE
T ss_pred             hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCCcc--HHHHHHHHhcCCCc
Confidence            589999999999998 59999999999999 99 899999999999999999999998887655  7778888876 589


Q ss_pred             cEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC-CCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      |++||++|.+..++.++++++++ |+++.+|... .. .++.. ..+.+++++.|+.....   +++++++++++++++.
T Consensus       242 d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~-~~~~~-~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~  315 (347)
T 1jvb_A          242 DAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADL-HYHAP-LITLSEIQFVGSLVGNQ---SDFLGIMRLAEAGKVK  315 (347)
T ss_dssp             EEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCC-CCCHH-HHHHHTCEEEECCSCCH---HHHHHHHHHHHTTSSC
T ss_pred             eEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCCC-CCCHH-HHHhCceEEEEEeccCH---HHHHHHHHHHHcCCCC
Confidence            99999999977899999999998 9999999765 33 33321 23467889988765432   5789999999999875


Q ss_pred             CCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          307 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       307 ~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                        +.++++|+|+++++|++.+.+++. +|+|+++
T Consensus       316 --~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          316 --PMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             --CCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             --ceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence              457899999999999999998875 6999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=3e-50  Score=371.92  Aligned_cols=307  Identities=22%  Similarity=0.324  Sum_probs=254.0

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCC-CCCCCCEEEecc-cCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVS-DLEVGDHVLPVF-TGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|+.|+........ ..+|.++|||++|+|+++|++|+ +|++||||++.+ ..+|+.|++|++|++|+|++
T Consensus        37 lVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~  116 (360)
T 1piw_A           37 DIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTK  116 (360)
T ss_dssp             EEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTT
T ss_pred             EEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcc
Confidence            6899999999999765433222 35799999999999999999999 999999996654 46899999999999999987


Q ss_pred             c-cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           78 L-RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        78 ~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      . .....           ....|     ....|+|+||+++|++.++++|+++++++||++++++.|||+++.+ +++++
T Consensus       117 ~~~~~~~-----------~~~~g-----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~  179 (360)
T 1piw_A          117 FVTTYSQ-----------PYEDG-----YVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGP  179 (360)
T ss_dssp             CEESSSC-----------BCTTS-----CBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCST
T ss_pred             hhhcccc-----------ccCCC-----ccCCCcceeEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCC
Confidence            5 11100           00001     1124799999999999999999999999999999999999999765 89999


Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC-ChhHHHHHHHHhcCCccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~-~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      |++|||+|+|++|++++|+||.+|+ +|++++++++++++++++|++.++++.+. +  +.+.+.    +++|++||++|
T Consensus       180 g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~--~~~~~~----~~~D~vid~~g  252 (360)
T 1piw_A          180 GKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEEGD--WGEKYF----DTFDLIVVCAS  252 (360)
T ss_dssp             TCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGTSC--HHHHSC----SCEEEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCchH--HHHHhh----cCCCEEEECCC
Confidence            9999999999999999999999999 79999999999999999999999988765 4  554443    57999999999


Q ss_pred             C--hHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCcee
Q 019414          236 N--IDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT  312 (341)
Q Consensus       236 ~--~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  312 (341)
                      .  +..++.++++++++ |+++.+|.... . .++.. ..+.+++++.|+.....   +++++++++++++++.+.  + 
T Consensus       253 ~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~-~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~--i-  323 (360)
T 1piw_A          253 SLTDIDFNIMPKAMKVG-GRIVSISIPEQ-HEMLSLK-PYGLKAVSISYSALGSI---KELNQLLKLVSEKDIKIW--V-  323 (360)
T ss_dssp             CSTTCCTTTGGGGEEEE-EEEEECCCCCS-SCCEEEC-GGGCBSCEEEECCCCCH---HHHHHHHHHHHHTTCCCC--E-
T ss_pred             CCcHHHHHHHHHHhcCC-CEEEEecCCCC-ccccCHH-HHHhCCeEEEEEecCCH---HHHHHHHHHHHhCCCcce--E-
Confidence            8  77888999999998 99999997654 2 22222 23568889988765432   568999999999988654  5 


Q ss_pred             eeecCCc--HHHHHHHHhcCCc-ceEEEecC
Q 019414          313 HRIPFSE--INKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       313 ~~~~~~~--i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      ++|++++  +++|++.+.+++. +|+|++++
T Consensus       324 ~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~  354 (360)
T 1piw_A          324 ETLPVGEAGVHEAFERMEKGDVRYRFTLVGY  354 (360)
T ss_dssp             EEEESSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             EEEeccHhHHHHHHHHHHCCCCceEEEEecC
Confidence            8999999  9999999988875 69999876

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.2e-49  Score=367.42  Aligned_cols=309  Identities=23%  Similarity=0.346  Sum_probs=252.4

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+........ ..+|.++|||++|+|+++|++|++|++||||++.+. .+||.|++|+++++|+|+..
T Consensus        38 lVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~  117 (357)
T 2cf5_A           38 NIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKK  117 (357)
T ss_dssp             EEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTC
T ss_pred             EEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCc
Confidence            6899999999999665433222 467999999999999999999999999999998654 48999999999999999654


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCC-CC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE-RG  157 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~g  157 (341)
                      ...- .         +....|     ....|+|+||+++|++.++++|+++++++||++++++.|||+++. ..+++ +|
T Consensus       118 ~~~~-~---------~~~~~g-----~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g  181 (357)
T 2cf5_A          118 IWSY-N---------DVYING-----QPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLS-HFGLKQPG  181 (357)
T ss_dssp             EETT-T---------SBCTTS-----CBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGTHHHHHHHHHH-HTSTTSTT
T ss_pred             cccc-c---------ccccCC-----CCCCCccccEEEechhhEEECcCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCC
Confidence            3210 0         000011     123479999999999999999999999999999999999999965 46788 99


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      ++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++.++++.+.     +.+++.+ +++|++||++|.
T Consensus       182 ~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~-----~~~~~~~-~g~D~vid~~g~  254 (357)
T 2cf5_A          182 LRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSDQ-----AKMSELA-DSLDYVIDTVPV  254 (357)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTCH-----HHHHHST-TTEEEEEECCCS
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeeccccH-----HHHHHhc-CCCCEEEECCCC
Confidence            999999999999999999999999 8999999999999888 8999999987642     2344544 379999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcc-cccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      +..++.++++++++ |+++.+|....... ++.  ..+.+++++.|+.....   +++++++++++++++.+.  + ++|
T Consensus       255 ~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~--~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~--~-~~~  325 (357)
T 2cf5_A          255 HHALEPYLSLLKLD-GKLILMGVINNPLQFLTP--LLMLGRKVITGSFIGSM---KETEEMLEFCKEKGLSSI--I-EVV  325 (357)
T ss_dssp             CCCSHHHHTTEEEE-EEEEECSCCSSCCCCCHH--HHHHHTCEEEECCSCCH---HHHHHHHHHHHHTTCCCC--E-EEE
T ss_pred             hHHHHHHHHHhccC-CEEEEeCCCCCCccccCH--HHHhCccEEEEEccCCH---HHHHHHHHHHHcCCCCCc--e-EEE
Confidence            66889999999998 99999997553322 222  14568899988765432   468999999999988654  3 799


Q ss_pred             cCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          316 PFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      +++++++|++.+.+++. +|+|+++++
T Consensus       326 ~l~~~~~A~~~~~~~~~~gKvvi~~~~  352 (357)
T 2cf5_A          326 KMDYVNTAFERLEKNDVRYRFVVDVEG  352 (357)
T ss_dssp             EGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred             eHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence            99999999999988875 599998763

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1e-50  Score=374.61  Aligned_cols=304  Identities=20%  Similarity=0.239  Sum_probs=253.6

Q ss_pred             CccccccCCcCcceeeeccCCC-CCC---CccccccceEEEEEecCCCCCCCCCCEEEecccCC--CCCChhhcCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLF---PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE--CGDCRHCRSDVSNM   74 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~---p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~--c~~c~~c~~~~~~~   74 (341)
                      |||++++|+|+.|+........ ..+   |.++|||++| |+++|++ ++|++||||++.+..+  |+.|++|+++++|+
T Consensus        29 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~  106 (357)
T 2b5w_A           29 LVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDM  106 (357)
T ss_dssp             EEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGG
T ss_pred             EEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCccc
Confidence            6899999999999665433222 356   8999999999 9999999 9999999999998888  99999999999999


Q ss_pred             CccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCC
Q 019414           75 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  154 (341)
Q Consensus        75 c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~  154 (341)
                      |++..... .         |+         ....|+|+||+++|++.++++|++++ + +|+++++++|||+++ +.+++
T Consensus       107 C~~~~~~~-~---------g~---------~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal~~~~~ta~~al-~~~~~  164 (357)
T 2b5w_A          107 APDGMYFE-R---------GI---------VGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFLIEPISITEKAL-EHAYA  164 (357)
T ss_dssp             CCTTSCEE-E---------TT---------BEECCSCBSEEEEEGGGEEECCGGGS-T-TGGGHHHHHHHHHHH-HHHHH
T ss_pred             CCCCcccc-c---------Cc---------cCCCcceeeEEEEchHHeEECCCCcc-h-hhhhhchHHHHHHHH-HhcCC
Confidence            99864420 0         00         01137999999999999999999999 5 466889999999997 67889


Q ss_pred             CCC------CEEEEECCCHHHHHH-HHHH-HHcCCCEEEEEcCChh---hHHHHHHcCCceecCCCCCChhHHHHHHHHh
Q 019414          155 ERG------SSVAVFGLGAVGLAA-AEGA-RIAGASRIIGVDRSSK---RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       155 ~~g------~~vlI~G~g~~G~~a-~~la-~~~g~~~vv~v~~~~~---~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      ++|      ++|||+|+|++|+++ +|+| |.+|+++|++++++++   |+++++++|++.+ |+++.+  +.+ +++. 
T Consensus       165 ~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~~~--~~~-i~~~-  239 (357)
T 2b5w_A          165 SRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQTP--VED-VPDV-  239 (357)
T ss_dssp             TTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTTSC--GGG-HHHH-
T ss_pred             CCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCccC--HHH-HHHh-
Confidence            999      999999999999999 9999 9999955999999999   9999999999999 887655  666 7777 


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC-CCcccccccce----eeecceEEEeeecCCCCCCCHHHHHH
Q 019414          224 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPIN----VLNERTLKGTFFGNYKPRTDLPSVVD  298 (341)
Q Consensus       224 ~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~-~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~  298 (341)
                      .+++|+|||++|++..+++++++++++ |+++.+|... ....++.. ..    +.+++++.|+.....   ++++++++
T Consensus       240 ~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~  314 (357)
T 2b5w_A          240 YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSDWAFEVDAG-AFHREMVLHNKALVGSVNSHV---EHFEAATV  314 (357)
T ss_dssp             SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCCCCCCCCHH-HHHHHHHHTTCEEEECCCCCH---HHHHHHHH
T ss_pred             CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCCCCceecHH-HHhHHHHhCCeEEEEeccCCH---HHHHHHHH
Confidence            558999999999977899999999998 9999999765 32222221 22    468899988765432   57899999


Q ss_pred             HHHCC--CCCCCCceeeeecCCcHHHHHHHHhcCCcceEEEecCC
Q 019414          299 MYMNK--QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED  341 (341)
Q Consensus       299 ~~~~~--~i~~~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~~~  341 (341)
                      +++++  ++ +.++++++|+++++++|++.+  +..+|+|+++++
T Consensus       315 l~~~g~~~~-~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~~~  356 (357)
T 2b5w_A          315 TFTKLPKWF-LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHSCHHH-HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEECCC
T ss_pred             HHHhCchhh-hhhhcceeecHHHHHHHHHHh--CCCceEEEEecC
Confidence            99999  86 667788999999999999988  556799999875

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.6e-48  Score=360.58  Aligned_cols=303  Identities=22%  Similarity=0.253  Sum_probs=255.4

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+.......  ...+|.++|||++|+|+++|++|++|++||||++.+..      +|+++. |.|.+.
T Consensus        57 lVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~  129 (363)
T 3uog_A           57 IVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAP------GWLDGL-RPGTGR  129 (363)
T ss_dssp             EEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSST------TCCSSS-CCSCSS
T ss_pred             EEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCCCCCCCCEEEEeccc------cccccc-cccccc
Confidence            689999999999976543332  24689999999999999999999999999999988643      678888 899753


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      .....        ..          +...+|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|+
T Consensus       130 ~~~~~--------~~----------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~  191 (363)
T 3uog_A          130 TPAYE--------TL----------GGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGD  191 (363)
T ss_dssp             CCCCC--------CT----------TTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTC
T ss_pred             ccccc--------cc----------CcCCCCcceeEEEechHHeEECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCC
Confidence            21100        00          1123479999999999999999999999999999999999999988889999999


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      +|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++|....+  +.+.+++.+++ ++|++|||+|. 
T Consensus       192 ~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~~~~v~~~~~g~g~D~vid~~g~-  267 (363)
T 3uog_A          192 RVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEED--WVERVYALTGDRGADHILEIAGG-  267 (363)
T ss_dssp             EEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHHTTCCEEEEEEETTS-
T ss_pred             EEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEcCCccc--HHHHHHHHhCCCCceEEEECCCh-
Confidence            99999999999999999999999 899999999999999999999999854445  88999999988 99999999995 


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      +.+++++++++++ |+++.+|..... ..++. ...+.+++++.|+.....   +++++++++++++++  .++++++|+
T Consensus       268 ~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l--~~~i~~~~~  340 (363)
T 3uog_A          268 AGLGQSLKAVAPD-GRISVIGVLEGFEVSGPV-GPLLLKSPVVQGISVGHR---RALEDLVGAVDRLGL--KPVIDMRYK  340 (363)
T ss_dssp             SCHHHHHHHEEEE-EEEEEECCCSSCEECCBT-THHHHTCCEEEECCCCCH---HHHHHHHHHHHHHTC--CCCEEEEEE
T ss_pred             HHHHHHHHHhhcC-CEEEEEecCCCcccCcCH-HHHHhCCcEEEEEecCCH---HHHHHHHHHHHcCCC--ccceeeEEc
Confidence            7899999999998 999999976543 22222 223568899998775543   579999999999976  456889999


Q ss_pred             CCcHHHHHHHHhcCCcceEEEec
Q 019414          317 FSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                      ++++++|++.+.+++.+|+|+++
T Consensus       341 l~~~~~A~~~~~~~~~gKvvi~~  363 (363)
T 3uog_A          341 FTEVPEALAHLDRGPFGKVVIEF  363 (363)
T ss_dssp             GGGHHHHHHTGGGCCSBEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCccEEEeC
Confidence            99999999999988866999975

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=8.2e-49  Score=362.86  Aligned_cols=309  Identities=21%  Similarity=0.352  Sum_probs=251.3

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+....... ...+|.++|||++|+|+++|++|++|++||||++.+. .+||.|++|+++++|+|+..
T Consensus        45 lVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~  124 (366)
T 1yqd_A           45 RFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM  124 (366)
T ss_dssp             EEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTC
T ss_pred             EEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcc
Confidence            689999999999966543322 2457999999999999999999999999999998654 58999999999999999654


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCC-CC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE-RG  157 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-~g  157 (341)
                      ...- .+         ....|     ....|+|+||+++|++.++++|+++++++||++++++.|||+++. ..+++ +|
T Consensus       125 ~~~~-~~---------~~~~g-----~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~al~-~~~~~~~g  188 (366)
T 1yqd_A          125 ILTY-AS---------IYHDG-----TITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLK-YFGLDEPG  188 (366)
T ss_dssp             EESS-SS---------BCTTS-----CBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHHHHHHHHH-HTTCCCTT
T ss_pred             cccc-cc---------cccCC-----CcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHHHHHHHHH-hcCcCCCC
Confidence            3210 00         00011     123479999999999999999999999999999999999999965 46787 99


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      ++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++.++|+.+.     +.+++.+ +++|+|||++|.
T Consensus       189 ~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~-----~~~~~~~-~~~D~vid~~g~  261 (366)
T 1yqd_A          189 KHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRDQ-----EQMQAAA-GTLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTCH-----HHHHHTT-TCEEEEEECCSS
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccCH-----HHHHHhh-CCCCEEEECCCc
Confidence            999999999999999999999999 8999999999998877 8999999887642     2344554 379999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeec
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIP  316 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  316 (341)
                      ...++.++++++++ |+++.+|.......++. ...+.+++++.|+.....   +++++++++++++++.+.  + ++|+
T Consensus       262 ~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~~--~-~~~~  333 (366)
T 1yqd_A          262 VHPLLPLFGLLKSH-GKLILVGAPEKPLELPA-FSLIAGRKIVAGSGIGGM---KETQEMIDFAAKHNITAD--I-EVIS  333 (366)
T ss_dssp             CCCSHHHHHHEEEE-EEEEECCCCSSCEEECH-HHHHTTTCEEEECCSCCH---HHHHHHHHHHHHTTCCCC--E-EEEC
T ss_pred             HHHHHHHHHHHhcC-CEEEEEccCCCCCCcCH-HHHHhCCcEEEEecCCCH---HHHHHHHHHHHcCCCCCc--e-EEEc
Confidence            66789999999998 99999997654322222 123467888888765432   468899999999988764  3 7999


Q ss_pred             CCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          317 FSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       317 ~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      |+++++|++.+.+++. +|+|++++
T Consensus       334 l~~~~~A~~~~~~~~~~gKvvl~~~  358 (366)
T 1yqd_A          334 TDYLNTAMERLAKNDVRYRFVIDVG  358 (366)
T ss_dssp             GGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred             HHHHHHHHHHHHcCCcceEEEEEcc
Confidence            9999999999998875 69999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=7.7e-47  Score=359.33  Aligned_cols=309  Identities=17%  Similarity=0.194  Sum_probs=256.6

Q ss_pred             CccccccCCcCcceeeecc------------C------CCCCCC-ccccccceEEEEEecCCCCCCCCCCEEEecccCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQ------------G------QTPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC   61 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~------------~------~~~~~p-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c   61 (341)
                      |||++++|+|++|+.....            +      ....+| .++|||++|+|+++|++|++|++||||++.+. .|
T Consensus        74 lVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c  152 (456)
T 3krt_A           74 LVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SV  152 (456)
T ss_dssp             EEEEEEEEECHHHHHHHTTCSSCSHHHHHHHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-EC
T ss_pred             EEEEEEEEecchhhhhhhcCcccchhhhhhccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cc
Confidence            6899999999998532110            0      012467 69999999999999999999999999998654 68


Q ss_pred             CCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccc
Q 019414           62 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV  141 (341)
Q Consensus        62 ~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~  141 (341)
                      ..|..|..+.++.|.....+.            +         ....|+|+||+++|++.++++|+++++++||++++++
T Consensus       153 ~~~~~~~~~~~~~c~~~~~~G------------~---------~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~  211 (456)
T 3krt_A          153 ELESSDGHNDTMLDPEQRIWG------------F---------ETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVN  211 (456)
T ss_dssp             CCCSGGGTTSGGGCTTCEETT------------T---------TSSSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHH
T ss_pred             cccccccccccccCccccccc------------c---------CCCCCcccceEEechHHeeECCCCCCHHHHHHhhhHH
Confidence            889999999999998876642            1         1123799999999999999999999999999999999


Q ss_pred             hhhhhhhhhh--cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh-----
Q 019414          142 STGLGATLNV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR-----  213 (341)
Q Consensus       142 ~ta~~~l~~~--~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~-----  213 (341)
                      .|||+++...  +++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++++|++.++++.+.+.     
T Consensus       212 ~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~  290 (456)
T 3krt_A          212 STAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKD  290 (456)
T ss_dssp             HHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEE
T ss_pred             HHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCccccccc
Confidence            9999998754  78999999999997 9999999999999999 8888889999999999999999998876541     


Q ss_pred             ----------hHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEE
Q 019414          214 ----------PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKG  281 (341)
Q Consensus       214 ----------~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g  281 (341)
                                .+.+.+++.+++ ++|+|||++|+ +.++.++++++++ |+++.+|...... .++. ...+.+++++.|
T Consensus       291 ~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~i~g  367 (456)
T 3krt_A          291 ENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR-ETFGASVFVTRKG-GTITTCASTSGYMHEYDN-RYLWMSLKRIIG  367 (456)
T ss_dssp             TTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH-HHHHHHHHHEEEE-EEEEESCCTTCSEEEEEH-HHHHHTTCEEEE
T ss_pred             ccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc-hhHHHHHHHhhCC-cEEEEEecCCCcccccCH-HHHHhcCeEEEE
Confidence                      245788888887 99999999988 8999999999998 9999999765432 2221 223457788888


Q ss_pred             eeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          282 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      +.....   .++.++++++++|++.  +.++++|+|+++++|++.+.+++. +|+|+.+.
T Consensus       368 ~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~eA~~~l~~~~~~GKvvv~~~  422 (456)
T 3krt_A          368 SHFANY---REAWEANRLIAKGRIH--PTLSKVYSLEDTGQAAYDVHRNLHQGKVGVLCL  422 (456)
T ss_dssp             CCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEESS
T ss_pred             eccCCH---HHHHHHHHHHHcCCcc--cceeEEEcHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence            876544   4577899999999875  457899999999999999988886 59988764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2e-48  Score=360.38  Aligned_cols=305  Identities=18%  Similarity=0.191  Sum_probs=248.1

Q ss_pred             CccccccCCcCcceeeecc--CCC-CCC---CccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQ--GQT-PLF---PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM   74 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~--~~~-~~~---p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~   74 (341)
                      |||++++|+|+.|+.....  ... ..+   |.++|||++|+|++  ++ ++|++||||++.+..+||.|++|++|++|+
T Consensus        30 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~  106 (366)
T 2cdc_A           30 KIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDF  106 (366)
T ss_dssp             EEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGG
T ss_pred             EEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCccc
Confidence            6899999999999665433  222 356   99999999999999  77 899999999999999999999999999999


Q ss_pred             CccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh--h--
Q 019414           75 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--N--  150 (341)
Q Consensus        75 c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~--  150 (341)
                      |++.....          .|+.         ...|+|+||++++++.++++|++++ ++| ++++++.|||+++.  +  
T Consensus       107 C~~~~~~~----------~g~~---------~~~G~~aey~~v~~~~~~~iP~~l~-~~A-al~~~~~ta~~al~~~~~~  165 (366)
T 2cdc_A          107 CETGEFGE----------AGIH---------KMDGFMREWWYDDPKYLVKIPKSIE-DIG-ILAQPLADIEKSIEEILEV  165 (366)
T ss_dssp             CSSSCCEE----------ETTB---------EECCSCBSEEEECGGGEEEECGGGT-TTG-GGHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccc----------CCcc---------CCCCceeEEEEechHHeEECcCCcc-hhh-hhcCcHHHHHHHHHhhhhc
Confidence            98754320          0000         0137999999999999999999999 776 57889999999986  4  


Q ss_pred             hcCCC--C-------CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHHHHcCCceecCCCCCChhHHHH
Q 019414          151 VAKPE--R-------GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---KRFEEAKKFGVTDFVNTSEHDRPIQEV  218 (341)
Q Consensus       151 ~~~~~--~-------g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~---~~~~~~~~~g~~~vv~~~~~~~~~~~~  218 (341)
                      ..+++  +       |++|||+|+|++|++++|+|+..|+ +|+++++++   ++.++++++|++.+ | .+ +  +.+.
T Consensus       166 ~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-~-~~-~--~~~~  239 (366)
T 2cdc_A          166 QKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-N-SS-N--GYDK  239 (366)
T ss_dssp             GGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-E-CT-T--CSHH
T ss_pred             ccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-c-hH-H--HHHH
Confidence            77888  8       9999999999999999999999999 999999998   89999999999988 7 54 3  6666


Q ss_pred             HHHHhcCCccEEEeccCChHHH-HHHHHHhcCCCcEEEEEccCCCC-cccccccc--eeeecceEEEeeecCCCCCCCHH
Q 019414          219 IAEMTNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPSKD-AVFMTKPI--NVLNERTLKGTFFGNYKPRTDLP  294 (341)
Q Consensus       219 i~~~~~~~~d~vld~~g~~~~~-~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~  294 (341)
                      +++ +++++|++||++|.+..+ +.++++++++ |+++.+|..... ..++....  .+.+++++.|+....   .++++
T Consensus       240 ~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~  314 (366)
T 2cdc_A          240 LKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQ---KPHFQ  314 (366)
T ss_dssp             HHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEECCCCC---HHHHH
T ss_pred             HHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCCCccccChhhhHHHHhcCcEEEEecCCC---HHHHH
Confidence            666 556899999999987688 9999999998 999999976543 22322210  356888998876432   25789


Q ss_pred             HHHHHHHCCCCC----CCCceeeeecCCcHHHHHHH--HhcCCcceEEEecC
Q 019414          295 SVVDMYMNKQLE----LEKFITHRIPFSEINKAFEY--MVKGEGLRCIISME  340 (341)
Q Consensus       295 ~~~~~~~~~~i~----~~~~~~~~~~~~~i~ea~~~--~~~~~~~k~vl~~~  340 (341)
                      +++++++++++.    +.++++++|+|+++++|++.  ++.+..+|+|++++
T Consensus       315 ~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          315 QAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             HHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             HHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence            999999999876    67778899999999999999  55444579999874

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=5.1e-47  Score=360.02  Aligned_cols=309  Identities=17%  Similarity=0.194  Sum_probs=252.7

Q ss_pred             CccccccCCcCcceeee---------------ccCC---CCCCC-ccccccceEEEEEecCCCCCCCCCCEEEecccCCC
Q 019414            1 MLSQKHNSFNPRNFVFG---------------FQGQ---TPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC   61 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~---------------~~~~---~~~~p-~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c   61 (341)
                      |||++++|+|++|+...               ..+.   ...+| .++|||++|+|+++|++|++|++||||++.+..+|
T Consensus        66 lVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~  145 (447)
T 4a0s_A           66 LVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVD  145 (447)
T ss_dssp             EEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECC
T ss_pred             EEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCc
Confidence            68999999999984210               0111   12467 69999999999999999999999999999999999


Q ss_pred             CCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccc
Q 019414           62 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV  141 (341)
Q Consensus        62 ~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~  141 (341)
                      +.|+. .++.++.|.+.....            +.         ...|+|+||+++|++.++++|+++++++||++++++
T Consensus       146 ~~~~~-~~~~~~~c~~~~~~G------------~~---------~~~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~  203 (447)
T 4a0s_A          146 EQEPA-THGDGMLGTEQRAWG------------FE---------TNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCA  203 (447)
T ss_dssp             TTSGG-GGTCTTCSTTCEETT------------TT---------SSSCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHH
T ss_pred             Ccccc-ccccccccccccccc------------cc---------CCCCceeeeeecCHHHcEECCCCCCHHHHHHhHHHH
Confidence            88874 557899998876531            11         013799999999999999999999999999999999


Q ss_pred             hhhhhhhhh--hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC------
Q 019414          142 STGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD------  212 (341)
Q Consensus       142 ~ta~~~l~~--~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~------  212 (341)
                      .|||+++..  .+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++++.+.+      
T Consensus       204 ~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~  282 (447)
T 4a0s_A          204 GTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIA  282 (447)
T ss_dssp             HHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGG
T ss_pred             HHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeccccccccccc
Confidence            999999864  389999999999997 9999999999999999 888888999999999999999888764322      


Q ss_pred             ----------hhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEE
Q 019414          213 ----------RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKG  281 (341)
Q Consensus       213 ----------~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g  281 (341)
                                ..+.+.+++.+++++|++||++|. +.++.++++++++ |+++.+|...... .++. ...+.+++++.|
T Consensus       283 ~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~i~g  359 (447)
T 4a0s_A          283 DDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTFGLSVIVARRG-GTVVTCGSSSGYLHTFDN-RYLWMKLKKIVG  359 (447)
T ss_dssp             GCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH-HHHHHHHHHSCTT-CEEEESCCTTCSEEEEEH-HHHHHTTCEEEE
T ss_pred             ccccccchhhhHHHHHHHHHhCCCceEEEECCCc-hHHHHHHHHHhcC-CEEEEEecCCCcccccCH-HHHHhCCCEEEe
Confidence                      113677888885599999999988 6889999999998 9999999765422 1221 223557888888


Q ss_pred             eeecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          282 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      +.....   .+++++++++++|++.  ++++++|+|+++++|++.+.+++. +|+|+.+.
T Consensus       360 ~~~~~~---~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~  414 (447)
T 4a0s_A          360 SHGANH---EEQQATNRLFESGAVV--PAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCM  414 (447)
T ss_dssp             CCSCCH---HHHHHHHHHHHTTSSC--CCEEEEEEGGGHHHHHHHHHTTCCSSEEEEESS
T ss_pred             cCCCCH---HHHHHHHHHHHcCCcc--cceeEEEcHHHHHHHHHHHhcCCCceEEEEEeC
Confidence            765443   4678899999999875  568899999999999999988876 59988764

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=6.1e-46  Score=344.24  Aligned_cols=293  Identities=19%  Similarity=0.217  Sum_probs=238.7

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++++|+.|+.....  .+.+|.++|||++|+|+++|++|++|++||||+..       |..|+.+.         
T Consensus        40 lVkv~a~gi~~~D~~~~~g--~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~-------~~~~~~~~---------  101 (371)
T 3gqv_A           40 YVRVEAVAINPSDTSMRGQ--FATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGA-------QNEMCPRT---------  101 (371)
T ss_dssp             EEEEEEEECCGGGGC-------CCTTSCCCSEEEEEEEEECTTCCSCCTTCEEEEE-------CCTTCTTC---------
T ss_pred             EEEEEEEEcCHHHHHHhhc--CCCCCccCccccEEEEEEeCCCCCCCCCCCEEEEe-------ccCCCCCC---------
Confidence            6899999999999765432  35569999999999999999999999999999755       45554431         


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhh-cCC-----
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV-AKP-----  154 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~-~~~-----  154 (341)
                                               ...|+|+||+++|++.++++|+++++++||++++++.|||+++.+. .++     
T Consensus       102 -------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~  156 (371)
T 3gqv_A          102 -------------------------PDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSA  156 (371)
T ss_dssp             -------------------------TTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSC
T ss_pred             -------------------------CCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCcc
Confidence                                     1237999999999999999999999999999999999999998777 553     


Q ss_pred             ------CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414          155 ------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       155 ------~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                            ++|++|||+|+ |++|++++|+|+.+|+ +|+++. +++|+++++++|++.++|+++.+  +.+.+++.+++++
T Consensus       157 ~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~--~~~~v~~~t~g~~  232 (371)
T 3gqv_A          157 DQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRAPN--LAQTIRTYTKNNL  232 (371)
T ss_dssp             SSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSTT--HHHHHHHHTTTCC
T ss_pred             ccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCCch--HHHHHHHHccCCc
Confidence                  89999999998 9999999999999999 888885 88999999999999999998776  9999999998899


Q ss_pred             cEEEeccCChHHHHHHHHHh-cCCCcEEEEEccCCCC------ccccc--ccceeeecceEEEeeecCCCCC------CC
Q 019414          228 DRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKD------AVFMT--KPINVLNERTLKGTFFGNYKPR------TD  292 (341)
Q Consensus       228 d~vld~~g~~~~~~~~~~~l-~~~~g~~v~~g~~~~~------~~~~~--~~~~~~~~~~~~g~~~~~~~~~------~~  292 (341)
                      |++|||+|++..++.+++++ +++ |+++.+|.....      .....  ....+.+++++.|+......+.      +.
T Consensus       233 d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~  311 (371)
T 3gqv_A          233 RYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDL  311 (371)
T ss_dssp             CEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHH
T ss_pred             cEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHHHHHHHH
Confidence            99999999988999999999 587 999999964421      11111  1123446777776543322110      12


Q ss_pred             HHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-c-eEEEecCC
Q 019414          293 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-L-RCIISMED  341 (341)
Q Consensus       293 ~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~-k~vl~~~~  341 (341)
                      ++++++++++|++.+.+.+++.|+++++++|++.+.+++. + |+|+++.|
T Consensus       312 ~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~  362 (371)
T 3gqv_A          312 WRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG  362 (371)
T ss_dssp             HHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred             HHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence            4578899999999999888888999999999999998875 3 88887764

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=2.1e-45  Score=336.24  Aligned_cols=283  Identities=24%  Similarity=0.322  Sum_probs=243.9

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|+.|+..........+|.++|||++|+|+++|++|++|++||||++..                       
T Consensus        39 lVkv~a~gi~~~D~~~~~G~~~~~~P~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~-----------------------   95 (334)
T 3qwb_A           39 LIKNKYTGVNYIESYFRKGIYPCEKPYVLGREASGTVVAKGKGVTNFEVGDQVAYIS-----------------------   95 (334)
T ss_dssp             EEEEEEEECCTTHHHHHHTSSCCCSSEECCSEEEEEEEEECTTCCSCCTTCEEEEEC-----------------------
T ss_pred             EEEEEEEecCHHHHHHHCCCCCCCCCCccccceEEEEEEECCCCCCCCCCCEEEEee-----------------------
Confidence            689999999999976554444456899999999999999999999999999999762                       


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEee-cCceEECCCCCCchh---hhhccccchhhhhhhhhhcCCCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKINPLAPLDK---VCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~-~~~~~~lp~~~~~~~---aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                                                 .|+|+||++++ ++.++++|+++++++   ||++++.+.|||+++.+..++++
T Consensus        96 ---------------------------~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  148 (334)
T 3qwb_A           96 ---------------------------NSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKK  148 (334)
T ss_dssp             ---------------------------SSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCT
T ss_pred             ---------------------------CCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCC
Confidence                                       37999999999 999999999999999   88899999999999888889999


Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414          157 GSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  234 (341)
Q Consensus       157 g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~  234 (341)
                      |++|||+| +|++|++++|+|+..|+ +|+++++++++++.++++|++.++++++.+  +.+.+++.+++ ++|++||++
T Consensus       149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~--~~~~~~~~~~~~g~D~vid~~  225 (334)
T 3qwb_A          149 GDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKED--ILRQVLKFTNGKGVDASFDSV  225 (334)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSC--HHHHHHHHTTTSCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCCch--HHHHHHHHhCCCCceEEEECC
Confidence            99999999 59999999999999999 899999999999999999999999988766  88999999877 999999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCCCC-----CCHHHHHHHHHCCCCCCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYKPR-----TDLPSVVDMYMNKQLELE  308 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~i~~~  308 (341)
                      |. +.++.++++++++ |+++.+|...... .++. ...+.+++++.++....+...     +.++++++++++|++.+.
T Consensus       226 g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  302 (334)
T 3qwb_A          226 GK-DTFEISLAALKRK-GVFVSFGNASGLIPPFSI-TRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK  302 (334)
T ss_dssp             GG-GGHHHHHHHEEEE-EEEEECCCTTCCCCCBCG-GGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             Ch-HHHHHHHHHhccC-CEEEEEcCCCCCCCCcch-hhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc
Confidence            87 7899999999998 9999999765432 2222 223467888887665443211     134688999999988765


Q ss_pred             CceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          309 KFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       309 ~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                        ++++|+++++++|++.+.+++. +|+|+++++
T Consensus       303 --i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          303 --IYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             --EEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             --eeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence              7899999999999999998886 599999874

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=6.6e-45  Score=335.16  Aligned_cols=282  Identities=18%  Similarity=0.247  Sum_probs=240.8

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+.......  .+.+|.++|||++|+|+++|++|++|++||||+....                    
T Consensus        59 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--------------------  118 (353)
T 4dup_A           59 LVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCGLAN--------------------  118 (353)
T ss_dssp             EEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTCCSCCTTCEEEEECS--------------------
T ss_pred             EEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCCCCCCCCCEEEEecC--------------------
Confidence            689999999999966543322  2357899999999999999999999999999987621                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+++++|+
T Consensus       119 -----------------------------~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  169 (353)
T 4dup_A          119 -----------------------------GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGE  169 (353)
T ss_dssp             -----------------------------SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTC
T ss_pred             -----------------------------CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCC
Confidence                                         379999999999999999999999999999999999999988889999999


Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|||+| +|++|++++|+|+..|+ +|+++++++++++.++++|++.++++++.+  +.+.+++.+++++|++|||+|+ 
T Consensus       170 ~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~--~~~~~~~~~~~g~Dvvid~~g~-  245 (353)
T 4dup_A          170 SVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRSED--FAAVIKAETGQGVDIILDMIGA-  245 (353)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHHSSCEEEEEESCCG-
T ss_pred             EEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCchH--HHHHHHHHhCCCceEEEECCCH-
Confidence            999996 59999999999999999 899999999999999999999999988776  8888998885599999999988 


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcc--cccccceeeecceEEEeeecCCCCC-------CCHHHHHHHHHCCCCCCC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAV--FMTKPINVLNERTLKGTFFGNYKPR-------TDLPSVVDMYMNKQLELE  308 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~i~~~  308 (341)
                      +.++.++++++++ |+++.+|.......  ++. ...+.+++++.|+........       +.+++++++++++++.  
T Consensus       246 ~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--  321 (353)
T 4dup_A          246 AYFERNIASLAKD-GCLSIIAFLGGAVAEKVNL-SPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVA--  321 (353)
T ss_dssp             GGHHHHHHTEEEE-EEEEECCCTTCSEEEEEEC-HHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSC--
T ss_pred             HHHHHHHHHhccC-CEEEEEEecCCCcccCCCH-HHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCcc--
Confidence            6889999999998 99999997654322  222 223568899998876554210       0167889999999874  


Q ss_pred             CceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          309 KFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       309 ~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++++++|+++++++|++.+.+++. +|+|+++
T Consensus       322 ~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          322 PVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             CCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            568899999999999999998886 5999875

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=6.2e-45  Score=333.93  Aligned_cols=279  Identities=21%  Similarity=0.264  Sum_probs=234.0

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+.......  ...+|.++|||++|+|+++|++++ |++||||++...                    
T Consensus        52 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~-~~vGDrV~~~~~--------------------  110 (342)
T 4eye_A           52 VVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-IKPGDRVMAFNF--------------------  110 (342)
T ss_dssp             EEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSS-CCTTCEEEEECS--------------------
T ss_pred             EEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCC-CCCCCEEEEecC--------------------
Confidence            689999999999966543332  246899999999999999999999 999999997631                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|+||++++++.++++|+++++++||++++++.|||+++.+.+++++|+
T Consensus       111 -----------------------------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  161 (342)
T 4eye_A          111 -----------------------------IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGE  161 (342)
T ss_dssp             -----------------------------SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTC
T ss_pred             -----------------------------CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCC
Confidence                                         379999999999999999999999999999999999999988889999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++++. .+  +.+.+++.+++ ++|++|||+|+
T Consensus       162 ~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~--~~~~v~~~~~~~g~Dvvid~~g~  237 (342)
T 4eye_A          162 TVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE-EG--WAKAVREATGGAGVDMVVDPIGG  237 (342)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS-TT--HHHHHHHHTTTSCEEEEEESCC-
T ss_pred             EEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc-hh--HHHHHHHHhCCCCceEEEECCch
Confidence            9999997 9999999999999999 999999999999999999999999887 44  88999999988 99999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCC---CC---CCCHHHHHHHHHCCCCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNY---KP---RTDLPSVVDMYMNKQLELEK  309 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~---~~---~~~~~~~~~~~~~~~i~~~~  309 (341)
                       +.++.++++++++ |+++.+|...... .++. ...+.+++++.|+....+   .+   .+.+++++++++++ +  .+
T Consensus       238 -~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l--~~  311 (342)
T 4eye_A          238 -PAFDDAVRTLASE-GRLLVVGFAAGGIPTIKV-NRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-M--RP  311 (342)
T ss_dssp             --CHHHHHHTEEEE-EEEEEC----------CC-CCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-C--CC
T ss_pred             -hHHHHHHHhhcCC-CEEEEEEccCCCCCccCH-HHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-C--CC
Confidence             6889999999998 9999999755431 2222 223568999998875332   11   13578899999999 4  55


Q ss_pred             ceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          310 FITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       310 ~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +++++|+++++++|++.+.+++. +|+|+++
T Consensus       312 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P  342 (342)
T 4eye_A          312 PVSARIPLSEGRQALQDFADGKVYGKMVLVP  342 (342)
T ss_dssp             CEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            68899999999999999999886 5999874

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.3e-44  Score=329.61  Aligned_cols=283  Identities=20%  Similarity=0.254  Sum_probs=237.3

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|+........ +.+|.++|||++|+|+++|+++++|++||||++.+.                     
T Consensus        32 lVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~---------------------   90 (325)
T 3jyn_A           32 VVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTG---------------------   90 (325)
T ss_dssp             EEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCTTCEEEESSS---------------------
T ss_pred             EEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCCCCEEEEecC---------------------
Confidence            6899999999999665433333 368999999999999999999999999999997521                     


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                                                 ..|+|+||+++|++.++++|+++++++||++++.+.|+|+++.+.+++++|++
T Consensus        91 ---------------------------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  143 (325)
T 3jyn_A           91 ---------------------------PLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEI  143 (325)
T ss_dssp             ---------------------------SSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCE
T ss_pred             ---------------------------CCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCE
Confidence                                       13799999999999999999999999999999999999999988899999999


Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          160 VAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       160 vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      |||+| +|++|++++|+|+..|+ +|+++++++++++.++++|++.++|+++.+  +.+.+++.+++ ++|++||++|+ 
T Consensus       144 VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~-  219 (325)
T 3jyn_A          144 ILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSHED--VAKRVLELTDGKKCPVVYDGVGQ-  219 (325)
T ss_dssp             EEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTCCEEEEEESSCG-
T ss_pred             EEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHhCCCCceEEEECCCh-
Confidence            99998 49999999999999999 899999999999999999999999988766  88999999987 99999999998 


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeee-cceEEEeeecCCC-CCCC----HHHHHHHHHCCCCCCCCc
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLN-ERTLKGTFFGNYK-PRTD----LPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~-~~~~~g~~~~~~~-~~~~----~~~~~~~~~~~~i~~~~~  310 (341)
                      +.++.++++++++ |+++.+|...... .++... ...+ ++.+.+..+..+. ...+    ++++++++++|++.+.  
T Consensus       220 ~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--  295 (325)
T 3jyn_A          220 DTWLTSLDSVAPR-GLVVSFGNASGPVSGVNLGI-LAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVD--  295 (325)
T ss_dssp             GGHHHHHTTEEEE-EEEEECCCTTCCCCSCCTHH-HHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCC--
T ss_pred             HHHHHHHHHhcCC-CEEEEEecCCCCCCCCCHHH-HhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCc--
Confidence            7899999999998 9999999765432 222221 1233 4555543322221 1123    4588999999988776  


Q ss_pred             eeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          311 ITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++++|+++++++|++.+.+++. +|+|+.+
T Consensus       296 i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p  325 (325)
T 3jyn_A          296 GIEQYALKDAAKAQIELSARRTTGSTILIP  325 (325)
T ss_dssp             CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred             cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            6799999999999999999886 5999864

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=5e-44  Score=328.49  Aligned_cols=284  Identities=18%  Similarity=0.162  Sum_probs=236.4

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++++|+.|+.... +....+|.++|||++|+|+++|++|++|++||||++...                      
T Consensus        36 lVkv~a~gi~~~D~~~~~-g~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~----------------------   92 (346)
T 3fbg_A           36 LVKIQSISVNPVDTKQRL-MDVSKAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGS----------------------   92 (346)
T ss_dssp             EEEEEEEEECHHHHHHTT-SCCSSSCBCCCCCEEEEEEEECTTCCSCCTTCEEEECCC----------------------
T ss_pred             EEEEEEEEcCHHHHHHHh-CCCCCCCcCcCCccEEEEEEeCCCCCcCCCCCEEEEcCC----------------------
Confidence            689999999999965443 335678999999999999999999999999999997521                      


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCC-----
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE-----  155 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~-----  155 (341)
                                              ....|+|+||+++|++.++++|+++++++||++++++.|||+++.+..+++     
T Consensus        93 ------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~  148 (346)
T 3fbg_A           93 ------------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNE  148 (346)
T ss_dssp             ------------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHH
T ss_pred             ------------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCcccccc
Confidence                                    012379999999999999999999999999999999999999998889998     


Q ss_pred             -CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          156 -RGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       156 -~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                       +|++|||+| +|++|++++|+|+..|+ +|++++++++++++++++|++.++++++ +  +.+.+++..++++|++|||
T Consensus       149 ~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~--~~~~~~~~~~~g~Dvv~d~  224 (346)
T 3fbg_A          149 NEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHKE-S--LLNQFKTQGIELVDYVFCT  224 (346)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTTS-C--HHHHHHHHTCCCEEEEEES
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECCc-c--HHHHHHHhCCCCccEEEEC
Confidence             999999995 59999999999999999 9999999999999999999999998875 3  7888888844599999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC---CC------CCCHHHHHHHHHCCC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY---KP------RTDLPSVVDMYMNKQ  304 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~------~~~~~~~~~~~~~~~  304 (341)
                      +|++..++.++++++++ |+++.++....  .++.. ....+++++.++.....   ..      .+.++++++++++|+
T Consensus       225 ~g~~~~~~~~~~~l~~~-G~iv~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  300 (346)
T 3fbg_A          225 FNTDMYYDDMIQLVKPR-GHIATIVAFEN--DQDLN-ALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNI  300 (346)
T ss_dssp             SCHHHHHHHHHHHEEEE-EEEEESSCCSS--CBCGG-GGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTS
T ss_pred             CCchHHHHHHHHHhccC-CEEEEECCCCC--CCccc-cccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCC
Confidence            99877889999999998 99998874322  22222 22457888887654321   00      134788999999998


Q ss_pred             CCCCCceeeee---cCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          305 LELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       305 i~~~~~~~~~~---~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      +.+  .++++|   +++++++|++.+.+++. +|+|+++++
T Consensus       301 l~~--~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~  339 (346)
T 3fbg_A          301 YQP--TTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE  339 (346)
T ss_dssp             SCC--CEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred             EEC--CccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence            754  466777   89999999999999886 599998863

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1.6e-44  Score=331.01  Aligned_cols=285  Identities=21%  Similarity=0.250  Sum_probs=235.5

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+.......  ...+|.++|||++|+|+++|++|++|++||||+...                     
T Consensus        36 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~---------------------   94 (340)
T 3gms_A           36 FVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLR---------------------   94 (340)
T ss_dssp             EEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSCGGGTTCEEEECS---------------------
T ss_pred             EEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEecC---------------------
Confidence            689999999999966543332  246899999999999999999999999999999652                     


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                  ..|+|+||+++|++.++++|+++++++||++++.+.|||+++.+.+++++|+
T Consensus        95 ----------------------------~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~  146 (340)
T 3gms_A           95 ----------------------------GEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRND  146 (340)
T ss_dssp             ----------------------------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTC
T ss_pred             ----------------------------CCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCC
Confidence                                        1379999999999999999999999999999999999999998999999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++|+.+.+  +.+.+++.+++ ++|++|||+|+
T Consensus       147 ~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~  223 (340)
T 3gms_A          147 VLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTSTAP--LYETVMELTNGIGADAAIDSIGG  223 (340)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTSCEEEEEESSCH
T ss_pred             EEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCccc--HHHHHHHHhCCCCCcEEEECCCC
Confidence            9999997 6999999999999999 999999999999999999999999988766  88999999987 99999999988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC-------CCCCCHHHHHHHHHCCCCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY-------KPRTDLPSVVDMYMNKQLELEK  309 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~~~~~~~~~~~~i~~~~  309 (341)
                      + ....++++++++ |+++.+|..... .++........++.+........       ...++++++++++++|++.+..
T Consensus       224 ~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  300 (340)
T 3gms_A          224 P-DGNELAFSLRPN-GHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK  300 (340)
T ss_dssp             H-HHHHHHHTEEEE-EEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             h-hHHHHHHHhcCC-CEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc
Confidence            4 456677999998 999999976432 22211111112333333221110       0114688999999999998765


Q ss_pred             ceeeeecCCcHHHHHHHHhcCC-c-ceEEEecCC
Q 019414          310 FITHRIPFSEINKAFEYMVKGE-G-LRCIISMED  341 (341)
Q Consensus       310 ~~~~~~~~~~i~ea~~~~~~~~-~-~k~vl~~~~  341 (341)
                       ++++|+++++++|++.+.+++ . +|+|+++.|
T Consensus       301 -i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~  333 (340)
T 3gms_A          301 -VHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE  333 (340)
T ss_dssp             -EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred             -ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence             689999999999999999987 4 799998763

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.3e-43  Score=327.49  Aligned_cols=283  Identities=18%  Similarity=0.201  Sum_probs=234.8

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|+........ ..+|.++|||++|+|+++|++|++|++||||++.+.                     
T Consensus        56 lVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~---------------------  114 (363)
T 4dvj_A           56 LVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGS---------------------  114 (363)
T ss_dssp             EEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTTCCSCCTTCEEEECCC---------------------
T ss_pred             EEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccC---------------------
Confidence            6899999999999665433332 468999999999999999999999999999997521                     


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCC----
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE----  155 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~----  155 (341)
                                               ....|+|+||+++|++.++++|+++++++||++++++.|||+++.+..+++    
T Consensus       115 -------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~  169 (363)
T 4dvj_A          115 -------------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVP  169 (363)
T ss_dssp             -------------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCT
T ss_pred             -------------------------CCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcC
Confidence                                     112379999999999999999999999999999999999999988888888    


Q ss_pred             -CCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 -RGSSVAVFG-LGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 -~g~~vlI~G-~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                       +|++|||+| +|++|++++|+||.+ |+ +|++++++++|+++++++|++.++|+++ +  +.+.+++..++++|+|||
T Consensus       170 ~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~--~~~~v~~~~~~g~Dvvid  245 (363)
T 4dvj_A          170 GAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVKSLGAHHVIDHSK-P--LAAEVAALGLGAPAFVFS  245 (363)
T ss_dssp             TSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHTTCSEEECTTS-C--HHHHHHTTCSCCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC-C--HHHHHHHhcCCCceEEEE
Confidence             899999998 599999999999985 77 9999999999999999999999999865 3  888888885559999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC-----CC----CCCHHHHHHHHHCC
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY-----KP----RTDLPSVVDMYMNK  303 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~----~~~~~~~~~~~~~~  303 (341)
                      |+|++..++.++++++++ |+++.++...   .++. .....+++++.++.....     ..    .+.++++++++++|
T Consensus       246 ~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~~~~-~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  320 (363)
T 4dvj_A          246 TTHTDKHAAEIADLIAPQ-GRFCLIDDPS---AFDI-MLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEG  320 (363)
T ss_dssp             CSCHHHHHHHHHHHSCTT-CEEEECSCCS---SCCG-GGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHT
T ss_pred             CCCchhhHHHHHHHhcCC-CEEEEECCCC---ccch-HHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCC
Confidence            999877999999999998 9999996422   2222 223457888887554221     00    13478899999999


Q ss_pred             CCCCCCceeeee---cCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          304 QLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       304 ~i~~~~~~~~~~---~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      ++.+  .+++++   +++++++|++.+.+++. +|+|+++.
T Consensus       321 ~l~~--~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~  359 (363)
T 4dvj_A          321 RLRT--TLTNRLSPINAANLKQAHALVESGTARGKVVIEGF  359 (363)
T ss_dssp             SSCC--CEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred             Ceec--cccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence            8865  355555   99999999999999886 59999875

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=1.3e-43  Score=326.60  Aligned_cols=287  Identities=20%  Similarity=0.283  Sum_probs=235.5

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCC-CCCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|+.|+.......  .+.+|.++|||++|+|+++|++| ++|++||||++...                   
T Consensus        53 lVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~~-------------------  113 (354)
T 2j8z_A           53 LLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLP-------------------  113 (354)
T ss_dssp             EEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC--CCCTTCEEEEECS-------------------
T ss_pred             EEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCcCCCCCCCCEEEEecC-------------------
Confidence            689999999999966533222  23478999999999999999999 99999999997621                   


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                                                    .|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+++++|
T Consensus       114 ------------------------------~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g  163 (354)
T 2j8z_A          114 ------------------------------GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAG  163 (354)
T ss_dssp             ------------------------------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTT
T ss_pred             ------------------------------CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCC
Confidence                                          27999999999999999999999999999999999999998888999999


Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      ++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++|+.+.+  +.+.+.+.+.+ ++|++||++|
T Consensus       164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~G  240 (354)
T 2j8z_A          164 DYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKKED--FSEATLKFTKGAGVNLILDCIG  240 (354)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTSCEEEEEESSC
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCChH--HHHHHHHHhcCCCceEEEECCC
Confidence            99999985 9999999999999999 899999999999999999999999887765  88888888876 8999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCCC-------CCHHHHHHHHHCC-CCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPR-------TDLPSVVDMYMNK-QLE  306 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~-~i~  306 (341)
                      + ..++.++++++++ |+++.+|..... ..++.....+.+++++.|+........       ..++++++++++| ++.
T Consensus       241 ~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~  318 (354)
T 2j8z_A          241 G-SYWEKNVNCLALD-GRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQR  318 (354)
T ss_dssp             G-GGHHHHHHHEEEE-EEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CC
T ss_pred             c-hHHHHHHHhccCC-CEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCcc
Confidence            8 5889999999998 999999975432 122220123457889988765432100       0123577888888 445


Q ss_pred             CCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          307 LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       307 ~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      +.++++++|+++++++|++.+.+++. +|+|+++++
T Consensus       319 l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  354 (354)
T 2j8z_A          319 LLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ  354 (354)
T ss_dssp             CCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             ccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            56678899999999999999988775 699998864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.2e-43  Score=325.45  Aligned_cols=282  Identities=20%  Similarity=0.247  Sum_probs=235.0

Q ss_pred             CccccccCCcCcceeeeccCC---CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++++|+.|+.......   ...+|.++|||++|+|+++|++|++|++||||++.....                 
T Consensus        36 lVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~g~-----------------   98 (343)
T 3gaz_A           36 LVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGV-----------------   98 (343)
T ss_dssp             EEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCSS-----------------
T ss_pred             EEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCCCCCCCEEEEEeCCC-----------------
Confidence            689999999999966543322   256899999999999999999999999999998752110                 


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                                                 ....|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|
T Consensus        99 ---------------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  151 (343)
T 3gaz_A           99 ---------------------------GGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDG  151 (343)
T ss_dssp             ---------------------------TTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTT
T ss_pred             ---------------------------CCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCC
Confidence                                       00237999999999999999999999999999999999999998888999999


Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      ++|||+|+ |++|++++|+|+..|+ +|+++ .++++++.++++|++. ++ .+.+  +.+.+++.+++ ++|++|||+|
T Consensus       152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~-~~~~--~~~~~~~~~~~~g~D~vid~~g  225 (343)
T 3gaz_A          152 QTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID-ASRE--PEDYAAEHTAGQGFDLVYDTLG  225 (343)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE-TTSC--HHHHHHHHHTTSCEEEEEESSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec-cCCC--HHHHHHHHhcCCCceEEEECCC
Confidence            99999995 9999999999999999 89999 8999999999999998 76 4444  88889898887 9999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC-----C---CCCCHHHHHHHHHCCCCCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY-----K---PRTDLPSVVDMYMNKQLEL  307 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~---~~~~~~~~~~~~~~~~i~~  307 (341)
                      + +.++.++++++++ |+++.+|....   .+. ...+.+++++.++.....     .   ..++++++++++++|++.+
T Consensus       226 ~-~~~~~~~~~l~~~-G~iv~~g~~~~---~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  299 (343)
T 3gaz_A          226 G-PVLDASFSAVKRF-GHVVSCLGWGT---HKL-APLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAP  299 (343)
T ss_dssp             T-HHHHHHHHHEEEE-EEEEESCCCSC---CCC-HHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             c-HHHHHHHHHHhcC-CeEEEEcccCc---ccc-chhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHHCCCccc
Confidence            7 7899999999998 99999986541   222 223457888888653211     0   1146889999999998854


Q ss_pred             CCcee-eeecCCcHHHHHHHHhcCCc-----ceEEEecC
Q 019414          308 EKFIT-HRIPFSEINKAFEYMVKGEG-----LRCIISME  340 (341)
Q Consensus       308 ~~~~~-~~~~~~~i~ea~~~~~~~~~-----~k~vl~~~  340 (341)
                        .++ ++|+++++++|++.+.+++.     +|+|+++.
T Consensus       300 --~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~  336 (343)
T 3gaz_A          300 --RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE  336 (343)
T ss_dssp             --CBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC
T ss_pred             --CccCcEecHHHHHHHHHHHHcCCCcccccceEEEEec
Confidence              566 69999999999999988774     59999875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1e-43  Score=324.79  Aligned_cols=286  Identities=22%  Similarity=0.257  Sum_probs=236.9

Q ss_pred             CccccccCCcCcceeeeccCC--C--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--T--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|+.|+.......  .  +.+|.++|||++|+|+++|++|++|++||||+..+.                  
T Consensus        32 lVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~------------------   93 (333)
T 1wly_A           32 RLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGERVCTCLP------------------   93 (333)
T ss_dssp             EEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCSCCTTCEEEECSS------------------
T ss_pred             EEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCCCCCCCEEEEecC------------------
Confidence            689999999999966543322  2  457999999999999999999999999999986521                  


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchh--hhhccccchhhhhhhhhhcCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGVSTGLGATLNVAKP  154 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~--aa~l~~~~~ta~~~l~~~~~~  154 (341)
                                                    ..|+|+||+++|++.++++|+++++++  ||++++++.|||+++.+.+++
T Consensus        94 ------------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~  143 (333)
T 1wly_A           94 ------------------------------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKV  143 (333)
T ss_dssp             ------------------------------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ------------------------------CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCC
Confidence                                          027999999999999999999999999  999999999999998878899


Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEe
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  232 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld  232 (341)
                      ++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++|+++.+  +.+.+.+.+.+ ++|++||
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~--~~~~i~~~~~~~~~d~vi~  220 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYSTQD--FAEVVREITGGKGVDVVYD  220 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHHTTCCEEEEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCHH--HHHHHHHHhCCCCCeEEEE
Confidence            99999999996 9999999999999999 999999999999999999999988887665  88888888766 8999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeec--ceEEEeeecCC-CC---CCCHHHHHHHHHCCCC
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNE--RTLKGTFFGNY-KP---RTDLPSVVDMYMNKQL  305 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~--~~~~g~~~~~~-~~---~~~~~~~~~~~~~~~i  305 (341)
                      ++|+ ..++.++++++++ |+++.+|..... ..++.....+.++  +++.|+..... .+   .+.+++++++++++++
T Consensus       221 ~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l  298 (333)
T 1wly_A          221 SIGK-DTLQKSLDCLRPR-GMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVL  298 (333)
T ss_dssp             CSCT-TTHHHHHHTEEEE-EEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCcH-HHHHHHHHhhccC-CEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCc
Confidence            9998 8899999999998 999999976532 2222211234567  88877643211 11   1258889999999987


Q ss_pred             CCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          306 ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       306 ~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      .  +.++++|+++++++|++.+.+++. +|+|+++++
T Consensus       299 ~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          299 H--SSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             C--CCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             C--CCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            5  457899999999999999988775 699998865

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2e-44  Score=327.13  Aligned_cols=276  Identities=16%  Similarity=0.157  Sum_probs=214.0

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|+....... ...+|.++|||++|+|+++|++|++|++||||++.+..                    
T Consensus        33 lVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~--------------------   92 (315)
T 3goh_A           33 LVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSL--------------------   92 (315)
T ss_dssp             EEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGTTCEEEEECCT--------------------
T ss_pred             EEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCCCCEEEEeCCC--------------------
Confidence            689999999999976644333 34689999999999999999999999999999987421                    


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                                                ...|+|+||+++|++.++++|+++++++||+++++++|||+++ +.+++++|++
T Consensus        93 --------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~  145 (315)
T 3goh_A           93 --------------------------KRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQRE  145 (315)
T ss_dssp             --------------------------TSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCE
T ss_pred             --------------------------CCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCE
Confidence                                      1237999999999999999999999999999999999999998 8899999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |||+|+|++|++++|+||.+|+ +|++++ +++|+++++++|++.+++  +     .+.+    ++++|++|||+|+ +.
T Consensus       146 VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~--d-----~~~v----~~g~Dvv~d~~g~-~~  211 (315)
T 3goh_A          146 VLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR--E-----PSQV----TQKYFAIFDAVNS-QN  211 (315)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES--S-----GGGC----CSCEEEEECC------
T ss_pred             EEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc--C-----HHHh----CCCccEEEECCCc-hh
Confidence            9999999999999999999999 999998 999999999999999884  1     1122    4599999999998 45


Q ss_pred             HHHHHHHhcCCCcEEEEEccCCCCcccccc-cceeeecceEEEeeecCCC-----CCCCHHHHHHHHHCCCCCCCCceee
Q 019414          240 MISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVLNERTLKGTFFGNYK-----PRTDLPSVVDMYMNKQLELEKFITH  313 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~  313 (341)
                      ...++++++++ |+++.++........+.. .....+++++.++......     ..+.++++++++++|++.  +++++
T Consensus       212 ~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~  288 (315)
T 3goh_A          212 AAALVPSLKAN-GHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKME--IAAPD  288 (315)
T ss_dssp             --TTGGGEEEE-EEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSC--CCCCE
T ss_pred             HHHHHHHhcCC-CEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcc--cccce
Confidence            58899999998 999999754322222111 1112233333332211110     012467899999999875  56789


Q ss_pred             eecCCcHHHHHHHHhcCCcceEEEecCC
Q 019414          314 RIPFSEINKAFEYMVKGEGLRCIISMED  341 (341)
Q Consensus       314 ~~~~~~i~ea~~~~~~~~~~k~vl~~~~  341 (341)
                      +|+|+++++|++.+. +..+|+|++++|
T Consensus       289 ~~~l~~~~~A~~~~~-~~~gKvvi~~~~  315 (315)
T 3goh_A          289 IFRFEQMIEALDHSE-QTKLKTVLTLNE  315 (315)
T ss_dssp             EEEGGGHHHHHHHHH-HHCCCEEEESCC
T ss_pred             EecHHHHHHHHHHHH-hcCCcEEEEecC
Confidence            999999999999998 556799999875

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1e-43  Score=326.88  Aligned_cols=283  Identities=20%  Similarity=0.275  Sum_probs=227.2

Q ss_pred             CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++++|+.|+......  ....+|.++|||++|+|+++|++|++|++||||++...                    
T Consensus        34 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~--------------------   93 (349)
T 4a27_A           34 KIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVN--------------------   93 (349)
T ss_dssp             EEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSCCTTCEEEEECS--------------------
T ss_pred             EEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCCCCCCEEEEecC--------------------
Confidence            68999999999996654333  23468999999999999999999999999999997631                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|+||+++|++.++++|+++++++||++++++.|||+++.+.+++++|+
T Consensus        94 -----------------------------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  144 (349)
T 4a27_A           94 -----------------------------YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGM  144 (349)
T ss_dssp             -----------------------------SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTC
T ss_pred             -----------------------------CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence                                         379999999999999999999999999999999999999988889999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|||+|+ |++|++++|+|+.+|..+|+++. ++++++.++ +|++.+++ .+.+  +.+.+++.+++++|++|||+|+ 
T Consensus       145 ~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~~~~--~~~~~~~~~~~g~Dvv~d~~g~-  218 (349)
T 4a27_A          145 SVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-RNAD--YVQEVKRISAEGVDIVLDCLCG-  218 (349)
T ss_dssp             EEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-TTSC--HHHHHHHHCTTCEEEEEEECC--
T ss_pred             EEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-CCcc--HHHHHHHhcCCCceEEEECCCc-
Confidence            9999997 99999999999999655888886 677888888 99999998 5544  8889999887799999999998 


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcc---------------cccc-cceeeecceEEEeeecCCC---C-----CCCH
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAV---------------FMTK-PINVLNERTLKGTFFGNYK---P-----RTDL  293 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~---------------~~~~-~~~~~~~~~~~g~~~~~~~---~-----~~~~  293 (341)
                      +.++.++++++++ |+++.+|.......               .... ...+.++.++.++....+.   .     .+++
T Consensus       219 ~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  297 (349)
T 4a27_A          219 DNTGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVV  297 (349)
T ss_dssp             ------CTTEEEE-EEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHH
T ss_pred             hhHHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHH
Confidence            4568999999998 99999996432100               0011 1124567888887653210   1     2468


Q ss_pred             HHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          294 PSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       294 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      +++++++++|++.  +.++++|+++++++|++.+.+++. +|+|+++++
T Consensus       298 ~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~  344 (349)
T 4a27_A          298 EKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEK  344 (349)
T ss_dssp             HHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTC
T ss_pred             HHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCCCCceEEEecCC
Confidence            8999999999874  568899999999999999988876 599999864

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=2.1e-44  Score=331.47  Aligned_cols=284  Identities=13%  Similarity=0.167  Sum_probs=230.8

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCC-CCCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|+.|+.......  ...+|.++|||++|+|+++|++| ++|++||||++...                   
T Consensus        53 lVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-------------------  113 (349)
T 3pi7_A           53 LIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-------------------  113 (349)
T ss_dssp             EEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECT-------------------
T ss_pred             EEEEEEecCCHHHHHHhcccCCCCCCCCCCccceEEEEEEEECCCccCCCCCCCEEEEecc-------------------
Confidence            689999999999976543322  23689999999999999999999 99999999997731                   


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                                                 ....|+|+||+++|++.++++|+++++++||++++.+.|||++ ++.++ ++|
T Consensus       114 ---------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~-~~~~~-~~g  164 (349)
T 3pi7_A          114 ---------------------------LSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM-FDIVK-QEG  164 (349)
T ss_dssp             ---------------------------TSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHH-HHHHH-HHC
T ss_pred             ---------------------------CCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHH-HHHHh-hCC
Confidence                                       1124799999999999999999999999999999999999965 55566 667


Q ss_pred             -CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414          158 -SSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  234 (341)
Q Consensus       158 -~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~  234 (341)
                       ++|||+| +|++|++++|+|+..|+ +|+++++++++++.++++|++.++|+++.+  +.+.+++.+++ ++|++|||+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~v~~~~~~~g~D~vid~~  241 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKAPD--FEATLREVMKAEQPRIFLDAV  241 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEEETTSTT--HHHHHHHHHHHHCCCEEEESS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCcHH--HHHHHHHHhcCCCCcEEEECC
Confidence             6888885 59999999999999999 999999999999999999999999988766  89999999887 999999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCC------CCCCHHHHHHHHHCCCCCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYK------PRTDLPSVVDMYMNKQLEL  307 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~i~~  307 (341)
                      |+ +.++.++++++++ |+++.+|..... ..++.....+.+++++.|+....+.      ..+.++++++++++|++. 
T Consensus       242 g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~-  318 (349)
T 3pi7_A          242 TG-PLASAIFNAMPKR-ARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWS-  318 (349)
T ss_dssp             CH-HHHHHHHHHSCTT-CEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCC-
T ss_pred             CC-hhHHHHHhhhcCC-CEEEEEeccCCCCCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcc-
Confidence            87 5668999999998 999999965433 2222212335689999987754311      013577888899999874 


Q ss_pred             CCceeeeecCCcHHHHHHHHhcCCcceEEEec
Q 019414          308 EKFITHRIPFSEINKAFEYMVKGEGLRCIISM  339 (341)
Q Consensus       308 ~~~~~~~~~~~~i~ea~~~~~~~~~~k~vl~~  339 (341)
                       ++++++|+++++++|++.+.++..+|+|+++
T Consensus       319 -~~i~~~~~l~~~~~A~~~~~~~~~gKvvl~p  349 (349)
T 3pi7_A          319 -TDVTAVVPLAEAIAWVPAELTKPNGKVFIRP  349 (349)
T ss_dssp             -C-CCEEEEHHHHHHHHHHHHTSSSSCEEEEC
T ss_pred             -cccceEEcHHHHHHHHHHHhCCCCceEEEeC
Confidence             4578999999999999966666667999875

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=7.8e-43  Score=320.94  Aligned_cols=281  Identities=22%  Similarity=0.298  Sum_probs=232.4

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+.......  .+.+|.++|||++|+|+++|++|++|++||||++.+.                    
T Consensus        61 lVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--------------------  120 (351)
T 1yb5_A           61 LIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSST--------------------  120 (351)
T ss_dssp             EEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCC--------------------
T ss_pred             EEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCCCCCCCCCEEEEeCC--------------------
Confidence            689999999999965533222  2467999999999999999999999999999997631                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                  ..|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+++++|+
T Consensus       121 ----------------------------~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~  172 (351)
T 1yb5_A          121 ----------------------------ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGE  172 (351)
T ss_dssp             ----------------------------SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTC
T ss_pred             ----------------------------CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcC
Confidence                                        1279999999999999999999999999999999999999988788999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~  236 (341)
                      +|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++|+.+.+  +.+.+.+.+++ ++|++||++|.
T Consensus       173 ~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~--~~~~~~~~~~~~~~D~vi~~~G~  249 (351)
T 1yb5_A          173 SVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVN--YIDKIKKYVGEKGIDIIIEMLAN  249 (351)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSTT--HHHHHHHHHCTTCEEEEEESCHH
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCCch--HHHHHHHHcCCCCcEEEEECCCh
Confidence            9999997 9999999999999999 899999999999999999999998887655  88888888876 89999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCH----HHHHHHHHCCCCCCCCcee
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDL----PSVVDMYMNKQLELEKFIT  312 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~  312 (341)
                       +.++.++++++++ |+++.+|... ...++. ...+.+++++.|+....... +++    +.+.+++.++++.  ++++
T Consensus       250 -~~~~~~~~~l~~~-G~iv~~g~~~-~~~~~~-~~~~~~~~~i~g~~~~~~~~-~~~~~~~~~l~~~~~~g~l~--~~i~  322 (351)
T 1yb5_A          250 -VNLSKDLSLLSHG-GRVIVVGSRG-TIEINP-RDTMAKESSIIGVTLFSSTK-EEFQQYAAALQAGMEIGWLK--PVIG  322 (351)
T ss_dssp             -HHHHHHHHHEEEE-EEEEECCCCS-CEEECT-HHHHTTTCEEEECCGGGCCH-HHHHHHHHHHHHHHHHTCCC--CCEE
T ss_pred             -HHHHHHHHhccCC-CEEEEEecCC-CCccCH-HHHHhCCcEEEEEEeecCCH-HHHHHHHHHHHHHHHCCCcc--Cccc
Confidence             5788999999998 9999999642 222222 12346788898875433211 223    4455677788664  5578


Q ss_pred             eeecCCcHHHHHHH-HhcCC-cceEEEec
Q 019414          313 HRIPFSEINKAFEY-MVKGE-GLRCIISM  339 (341)
Q Consensus       313 ~~~~~~~i~ea~~~-~~~~~-~~k~vl~~  339 (341)
                      ++|+++++++|++. +++++ .+|+|+++
T Consensus       323 ~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          323 SQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             EEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            99999999999998 55544 46999874

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=1.3e-43  Score=322.59  Aligned_cols=277  Identities=19%  Similarity=0.254  Sum_probs=226.6

Q ss_pred             CccccccCCcCcceeeeccC------CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQG------QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM   74 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~------~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~   74 (341)
                      |||++++|+|+.|+......      ....+|.++|||++|+|+++|++|++|++||||++.+..++             
T Consensus        37 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV~~~~~~~~-------------  103 (321)
T 3tqh_A           37 LIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPD-------------  103 (321)
T ss_dssp             EEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECSTTT-------------
T ss_pred             EEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEccCCCC-------------
Confidence            68999999999996654331      24568999999999999999999999999999998742211             


Q ss_pred             CccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCC
Q 019414           75 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP  154 (341)
Q Consensus        75 c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~  154 (341)
                                                      ..|+|+||++++++.++++|+++++++||++++++.|||+++ +.+++
T Consensus       104 --------------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~  150 (321)
T 3tqh_A          104 --------------------------------HPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEV  150 (321)
T ss_dssp             --------------------------------CCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTC
T ss_pred             --------------------------------CCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCC
Confidence                                            237999999999999999999999999999999999999998 88999


Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      ++|++|||+| +|++|++++|+|+.+|+ +|+++. +++++++++++|++.++|+++.+. +.+.+     .++|++|||
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~-~~~~~-----~g~D~v~d~  222 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHEEDF-LLAIS-----TPVDAVIDL  222 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEETTTSCH-HHHCC-----SCEEEEEES
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEeCCCcch-hhhhc-----cCCCEEEEC
Confidence            9999999997 59999999999999999 888886 566799999999999998876541 22221     479999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCCCCCceee
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITH  313 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  313 (341)
                      +|++ ..++++++++++ |+++.+|.......   ......+++++.++....  ..+++++++++++++++.+  .+++
T Consensus       223 ~g~~-~~~~~~~~l~~~-G~iv~~g~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~g~l~~--~i~~  293 (321)
T 3tqh_A          223 VGGD-VGIQSIDCLKET-GCIVSVPTITAGRV---IEVAKQKHRRAFGLLKQF--NIEELHYLGKLVSEDKLRI--EISR  293 (321)
T ss_dssp             SCHH-HHHHHGGGEEEE-EEEEECCSTTHHHH---HHHHHHTTCEEECCCCCC--CHHHHHHHHHHHHTTSSCC--CEEE
T ss_pred             CCcH-HHHHHHHhccCC-CEEEEeCCCCchhh---hhhhhhcceEEEEEecCC--CHHHHHHHHHHHHCCCccc--cccc
Confidence            9985 459999999998 99999985432211   112235677777643221  2257899999999998865  4789


Q ss_pred             eecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          314 RIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       314 ~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      +|+++++++|++.+.+++. +|+|+++.
T Consensus       294 ~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          294 IFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             EECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             EEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            9999999999999999886 59999863

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=2.2e-43  Score=326.51  Aligned_cols=287  Identities=18%  Similarity=0.198  Sum_probs=229.7

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCC---------ccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFP---------RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS   69 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p---------~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~   69 (341)
                      |||++++|+|+.|+........  +.+|         .++|||++|+|+++|++|++|++||||++.+.           
T Consensus        37 lVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~-----------  105 (364)
T 1gu7_A           37 IVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHV-----------  105 (364)
T ss_dssp             EEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEEEEEECTTCCSCCTTCEEEESSS-----------
T ss_pred             EEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEEEEEEeCCCCCcCCCCCEEEecCC-----------
Confidence            6899999999999765433222  3467         89999999999999999999999999997631           


Q ss_pred             CCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCC-----------CCCchhhhhcc
Q 019414           70 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-----------LAPLDKVCILS  138 (341)
Q Consensus        70 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~-----------~~~~~~aa~l~  138 (341)
                                                           ..|+|+||+++|++.++++|+           ++++++||+++
T Consensus       106 -------------------------------------~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~  148 (364)
T 1gu7_A          106 -------------------------------------NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATIS  148 (364)
T ss_dssp             -------------------------------------CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCT
T ss_pred             -------------------------------------CCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhcc
Confidence                                                 137999999999999999998           89999999999


Q ss_pred             ccchhhhhhhhhhcCCCCC-CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh----HHHHHHcCCceecCCCCC-
Q 019414          139 CGVSTGLGATLNVAKPERG-SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGVTDFVNTSEH-  211 (341)
Q Consensus       139 ~~~~ta~~~l~~~~~~~~g-~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~----~~~~~~~g~~~vv~~~~~-  211 (341)
                      +++.|||+++.+.+++++| ++|||+|+ |++|++++|+||.+|+ +++++.++.++    ++.++++|++.++++++. 
T Consensus       149 ~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~  227 (364)
T 1gu7_A          149 VNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNN  227 (364)
T ss_dssp             THHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHH
T ss_pred             ccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHHhcCCeEEEecCccc
Confidence            9999999998777899999 99999997 9999999999999999 77777665544    677899999999987641 


Q ss_pred             ChhHHHHHHHHh--cC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC-CcccccccceeeecceEEEeeecCC
Q 019414          212 DRPIQEVIAEMT--NG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK-DAVFMTKPINVLNERTLKGTFFGNY  287 (341)
Q Consensus       212 ~~~~~~~i~~~~--~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~  287 (341)
                      ..++.+.+++.+  ++ ++|++|||+|++... +++++++++ |+++.+|.... ...++.. ..+.+++++.|+....+
T Consensus       228 ~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~  304 (364)
T 1gu7_A          228 SREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNN-GLMLTYGGMSFQPVTIPTS-LYIFKNFTSAGFWVTEL  304 (364)
T ss_dssp             CGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTT-CEEEECCCCSSCCEEECHH-HHHHSCCEEEECCHHHH
T ss_pred             hHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccC-CEEEEecCCCCCCcccCHH-HHhhcCcEEEEEchhHh
Confidence            113778888887  44 899999999985554 889999998 99999997543 2222221 22458889988765321


Q ss_pred             C---C---CCCHHHHHHHHHCCCCCCCCceeeee-cCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          288 K---P---RTDLPSVVDMYMNKQLELEKFITHRI-PFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       288 ~---~---~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      .   +   .++++++++++++|++.+.+..+..+ +++++++|++.+.+++. +|+|+++
T Consensus       305 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          305 LKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             cccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            1   0   13588999999999998876554555 45699999999988764 6999875

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=8.4e-43  Score=322.10  Aligned_cols=284  Identities=19%  Similarity=0.238  Sum_probs=235.8

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCC-CCCCCCEEEecccCCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~-~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|+.|+........  ..+|.++|||++|+|+++|++|+ +|++||||++..                    
T Consensus        57 lVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~~V~~~~~vGdrV~~~~--------------------  116 (362)
T 2c0c_A           57 LVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMA--------------------  116 (362)
T ss_dssp             EEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECTTGGGTCCTTCEEEEEC--------------------
T ss_pred             EEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECCCccCCCCCCCEEEEcc--------------------
Confidence            6899999999999665433222  35799999999999999999999 999999999762                    


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                                                    .|+|+||+++|++.++++|+. + .++|+++++++|||+++.+.+++++|
T Consensus       117 ------------------------------~G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g  164 (362)
T 2c0c_A          117 ------------------------------PGSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEG  164 (362)
T ss_dssp             ------------------------------SCCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTT
T ss_pred             ------------------------------CCcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCC
Confidence                                          279999999999999999996 3 56788999999999998888899999


Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      ++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++++++.+  +.+.+++.+++++|++|||+|.
T Consensus       165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~~~~~~~~g~D~vid~~g~  241 (362)
T 2c0c_A          165 KKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKTEP--VGTVLKQEYPEGVDVVYESVGG  241 (362)
T ss_dssp             CEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTTSC--HHHHHHHHCTTCEEEEEECSCT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCChh--HHHHHHHhcCCCCCEEEECCCH
Confidence            99999995 9999999999999999 899999999999999999999999887665  7888888775689999999988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCc------cc---ccccceeeecceEEEeeecCCC--CCCCHHHHHHHHHCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDA------VF---MTKPINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~------~~---~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~i  305 (341)
                       ..++.++++++++ |+++.+|......      .+   .+....+.+++++.|+....+.  ..++++++++++++|++
T Consensus       242 -~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l  319 (362)
T 2c0c_A          242 -AMFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDL  319 (362)
T ss_dssp             -HHHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCS
T ss_pred             -HHHHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCe
Confidence             7889999999998 9999998653211      00   1112235678899887654321  12468899999999988


Q ss_pred             CCCCc------eeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          306 ELEKF------ITHRIPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       306 ~~~~~------~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      .+...      ++..++++++++|++.+.+++. +|+|++++|
T Consensus       320 ~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          320 VCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             CCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             EeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            76533      3466899999999999988775 699999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-42  Score=317.24  Aligned_cols=283  Identities=19%  Similarity=0.226  Sum_probs=232.4

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|+.|+....... .+.+|.++|||++|+|+++|++|++|++|||| +.+    +                 
T Consensus        32 lVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~GdrV-~~~----g-----------------   89 (327)
T 1qor_A           32 QVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRV-VYA----Q-----------------   89 (327)
T ss_dssp             EEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTTCEE-EES----C-----------------
T ss_pred             EEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCCCCEE-EEC----C-----------------
Confidence            689999999999966543322 23579999999999999999999999999999 431    0                 


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                                                ...|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+++++|++
T Consensus        90 --------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~  143 (327)
T 1qor_A           90 --------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQ  143 (327)
T ss_dssp             --------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCE
T ss_pred             --------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCE
Confidence                                      012799999999999999999999999999999999999999887889999999


Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCCh
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI  237 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~  237 (341)
                      |||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++|+.+.+  +.+.+.+.+.+ ++|++||++| .
T Consensus       144 vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~D~vi~~~g-~  219 (327)
T 1qor_A          144 FLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYREED--LVERLKEITGGKKVRVVYDSVG-R  219 (327)
T ss_dssp             EEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTTSC--HHHHHHHHTTTCCEEEEEECSC-G
T ss_pred             EEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCCcc--HHHHHHHHhCCCCceEEEECCc-h
Confidence            999995 9999999999999999 899999999999999999999888887665  88888888766 8999999998 5


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeee-cceEEEeeecCCC-----CCCCHHHHHHHHHCCCCCCCCc
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLN-ERTLKGTFFGNYK-----PRTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~-~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      +.++.++++++++ |+++.+|..... ..++.. ..+.+ ++++.+.....+.     ..+.+++++++++++++.+  .
T Consensus       220 ~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~  295 (327)
T 1qor_A          220 DTWERSLDCLQRR-GLMVSFGNSSGAVTGVNLG-ILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKV--D  295 (327)
T ss_dssp             GGHHHHHHTEEEE-EEEEECCCTTCCCCCBCTH-HHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCC--C
T ss_pred             HHHHHHHHHhcCC-CEEEEEecCCCCCCccCHH-HHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCccc--c
Confidence            8999999999998 999999975432 122222 12334 5666544321111     0134788999999998865  4


Q ss_pred             ee--eeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          311 IT--HRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       311 ~~--~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++  ++|+++++++|++.+.+++. +|+|+++
T Consensus       296 i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          296 VAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             CCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             cccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            67  89999999999999988774 6999864

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=4.3e-43  Score=323.63  Aligned_cols=282  Identities=20%  Similarity=0.291  Sum_probs=223.3

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+.......  .+.+|.++|||++|+|+++|++|++|++||||++.+.                    
T Consensus        58 lVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~--------------------  117 (357)
T 1zsy_A           58 RVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANA--------------------  117 (357)
T ss_dssp             EEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTTCCSCCTTCEEEESSS--------------------
T ss_pred             EEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCCCCCCCCCCEEEEcCC--------------------
Confidence            689999999999966543322  2357999999999999999999999999999997631                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                  +.|+|+||++++++.++++|+++++++||++++++.|||+++.+.+++++|+
T Consensus       118 ----------------------------~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~  169 (357)
T 1zsy_A          118 ----------------------------GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGD  169 (357)
T ss_dssp             ----------------------------CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTC
T ss_pred             ----------------------------CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCC
Confidence                                        1379999999999999999999999999999999999999988888999999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC-h---hhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC--CccEEE
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-S---KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSV  231 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~-~---~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~--~~d~vl  231 (341)
                      +|||+|+ |++|++++|+||.+|+ +++++.++ +   +++++++++|++.++++++.   ..+.+.+.+.+  ++|++|
T Consensus       170 ~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~~~~~~~~~~~~Dvvi  245 (357)
T 1zsy_A          170 SVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEEL---RRPEMKNFFKDMPQPRLAL  245 (357)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHH---HSGGGGGTTSSSCCCSEEE
T ss_pred             EEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHHhcCCcEEEecCcc---hHHHHHHHHhCCCCceEEE
Confidence            9999997 9999999999999999 55555443 2   35788999999999876421   11234455544  599999


Q ss_pred             eccCChHHHHHHHHHhcCCCcEEEEEccCCC-CcccccccceeeecceEEEeeecCC----C---CCCCHHHHHHHHHCC
Q 019414          232 ECTGNIDNMISAFECVHDGWGVAVLVGVPSK-DAVFMTKPINVLNERTLKGTFFGNY----K---PRTDLPSVVDMYMNK  303 (341)
Q Consensus       232 d~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~----~---~~~~~~~~~~~~~~~  303 (341)
                      ||+|++ ...+++++++++ |+++.+|.... ...++.. ..+.+++++.|+....+    .   ..+.++++++++++|
T Consensus       246 d~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  322 (357)
T 1zsy_A          246 NCVGGK-SSTELLRQLARG-GTMVTYGGMAKQPVVASVS-LLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRG  322 (357)
T ss_dssp             ESSCHH-HHHHHHTTSCTT-CEEEECCCCTTCCBCCCHH-HHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred             ECCCcH-HHHHHHHhhCCC-CEEEEEecCCCCCCCCCHH-HHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcC
Confidence            999874 456789999998 99999985432 2222221 22458899988765321    0   013578899999999


Q ss_pred             CCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          304 QLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       304 ~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++.+.  +.++|+|+++++|++.+.+++. +|+|+++
T Consensus       323 ~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          323 QLTAP--ACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             SSCCC--CEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             CCcCc--cceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence            88765  4589999999999999988775 5999875

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=1.3e-43  Score=322.95  Aligned_cols=283  Identities=15%  Similarity=0.130  Sum_probs=228.9

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+........  .++|.++|||++|+|+++|  +++|++||||++.+   |..               
T Consensus        31 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~vGdrV~~~~---~~~---------------   90 (324)
T 3nx4_A           31 TVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFHAGQEVLLTG---WGV---------------   90 (324)
T ss_dssp             EEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCCTTCEEEEEC---TTB---------------
T ss_pred             EEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCCCCCEEEEcc---ccc---------------
Confidence            6899999999999765433322  4689999999999999998  68899999999873   100               


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh--hhcCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--NVAKPER  156 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~~  156 (341)
                                               +....|+|+||+++|++.++++|+++++++||++++.+.|||+++.  ...++++
T Consensus        91 -------------------------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~  145 (324)
T 3nx4_A           91 -------------------------GENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRP  145 (324)
T ss_dssp             -------------------------TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred             -------------------------CCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCC
Confidence                                     0112479999999999999999999999999999999999999876  3455676


Q ss_pred             CC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          157 GS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       157 g~-~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      ++ +|||+|+ |++|++++|+||.+|+ +|++++++++|+++++++|++.++|+++.+  .   +++++++++|++|||+
T Consensus       146 ~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~--~---~~~~~~~~~d~v~d~~  219 (324)
T 3nx4_A          146 QDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEFA--E---SRPLEKQLWAGAIDTV  219 (324)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGSS--C---CCSSCCCCEEEEEESS
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCHH--H---HHhhcCCCccEEEECC
Confidence            43 4999997 9999999999999999 899999999999999999999999887644  2   4455556899999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      |+ +.+++++++++++ |+++.+|...... .++. ...+.+++++.|+.......   .+.++.+++++++|++.+  .
T Consensus       220 g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~  294 (324)
T 3nx4_A          220 GD-KVLAKVLAQMNYG-GCVAACGLAGGFALPTTV-MPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQ--A  294 (324)
T ss_dssp             CH-HHHHHHHHTEEEE-EEEEECCCTTCSEEEEES-HHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHH--H
T ss_pred             Cc-HHHHHHHHHHhcC-CEEEEEecCCCCCCCCCH-HHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCC--C
Confidence            87 5899999999998 9999999765432 2221 22356899999876443211   135778889998887754  3


Q ss_pred             eeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          311 ITHRIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                       +++|+++++++|++.+.+++. +|+|++++
T Consensus       295 -~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          295 -ATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             -EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             -ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence             899999999999999999886 59999874

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1.9e-41  Score=310.23  Aligned_cols=278  Identities=17%  Similarity=0.233  Sum_probs=232.8

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCcccccc----ceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHE----AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e----~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++++|+.|+.+........+|.++|||    ++|+|++.  ++++|++||||++.                    
T Consensus        42 lVkv~a~gi~~~d~~~~~~~~~~~~p~~~G~e~g~~~~G~V~~~--~v~~~~vGdrV~~~--------------------   99 (336)
T 4b7c_A           42 LVKNEYLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVLVS--KHPGFQAGDYVNGA--------------------   99 (336)
T ss_dssp             EEEEEEEECCTHHHHHHSCSCCSSCCCCTTSBCCCEEEEEEEEE--CSTTCCTTCEEEEE--------------------
T ss_pred             EEEEEEEEeCHHHHhhhhcccccCCCCCCCcccCCceEEEEEec--CCCCCCCCCEEecc--------------------
Confidence            68999999999996554333333457788888    79999994  58999999999976                    


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhh--hhccccchhhhhhhhhhcCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV--CILSCGVSTGLGATLNVAKP  154 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~a--a~l~~~~~ta~~~l~~~~~~  154 (341)
                                                      |+|+||+++|++.++++|+++++.++  |++++++.|||+++.+.+++
T Consensus       100 --------------------------------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~  147 (336)
T 4b7c_A          100 --------------------------------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQP  147 (336)
T ss_dssp             --------------------------------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCC
T ss_pred             --------------------------------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCC
Confidence                                            69999999999999999999987776  78999999999998889999


Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      ++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.+ +++|++.++|+.+.+  +.+.+++.+++++|++||
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vi~  224 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKNED--LAAGLKRECPKGIDVFFD  224 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTTSC--HHHHHHHHCTTCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCCHH--HHHHHHHhcCCCceEEEE
Confidence            99999999997 9999999999999999 999999999999999 899999999988766  888999988669999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCCC----Cc-ccccc-cceeeecceEEEeeecCCCC--CCCHHHHHHHHHCCC
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPSK----DA-VFMTK-PINVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQ  304 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~----~~-~~~~~-~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~  304 (341)
                      ++|+ +.++.++++++++ |+++.+|....    .. ..... ...+.+++++.|+....+..  .+.++++++++++|+
T Consensus       225 ~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~  302 (336)
T 4b7c_A          225 NVGG-EILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGK  302 (336)
T ss_dssp             SSCH-HHHHHHHTTEEEE-EEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTS
T ss_pred             CCCc-chHHHHHHHHhhC-CEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCC
Confidence            9987 7899999999998 99999986542    10 01111 22346899999987654321  146888999999998


Q ss_pred             CCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          305 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       305 i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +.+..  ...++++++++|++.+.+++. +|+|+++
T Consensus       303 l~~~~--~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          303 LQSRE--DIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             SCCCE--EEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cccce--eeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            87764  345799999999999998886 5999875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=3.2e-41  Score=313.08  Aligned_cols=282  Identities=20%  Similarity=0.239  Sum_probs=223.6

Q ss_pred             CccccccCCcCcceeeeccCC----------------CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ----------------TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDC   64 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~----------------~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c   64 (341)
                      |||++++|+|+.|+.......                ..++|.++|||++|+|+++|++|++|++||||++.+..     
T Consensus        54 lVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~-----  128 (375)
T 2vn8_A           54 IVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP-----  128 (375)
T ss_dssp             EEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCT-----
T ss_pred             EEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcccceeeeEEEEEeCCCCCCCCCCCEEEEecCC-----
Confidence            689999999999966543211                12379999999999999999999999999999987310     


Q ss_pred             hhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhh
Q 019414           65 RHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG  144 (341)
Q Consensus        65 ~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta  144 (341)
                                                               ...|+|+||++++++.++++|+++++++||++++++.||
T Consensus       129 -----------------------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA  167 (375)
T 2vn8_A          129 -----------------------------------------WKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTA  167 (375)
T ss_dssp             -----------------------------------------TSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHH
T ss_pred             -----------------------------------------CCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHH
Confidence                                                     013799999999999999999999999999999999999


Q ss_pred             hhhhhhhcC----CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHH
Q 019414          145 LGATLNVAK----PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI  219 (341)
Q Consensus       145 ~~~l~~~~~----~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i  219 (341)
                      |+++.+.++    +++|++|||+|+ |++|++++|+|+..|+ +|++++ +++++++++++|++.++|+.+.+  +.+.+
T Consensus       168 ~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~--~~~~~  243 (375)
T 2vn8_A          168 WSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKLGADDVIDYKSGS--VEEQL  243 (375)
T ss_dssp             HHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTSSC--HHHHH
T ss_pred             HHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHcCCCEEEECCchH--HHHHH
Confidence            999877788    999999999995 9999999999999999 888887 67889999999999999987765  77666


Q ss_pred             HHHhcCCccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEccCCCCcc----cccc-----cceee-------ecceEEEe
Q 019414          220 AEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAV----FMTK-----PINVL-------NERTLKGT  282 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~----~~~~-----~~~~~-------~~~~~~g~  282 (341)
                      .+.  +++|++|||+|++ ..++.++++++++ |+++.+|.......    +...     ...+.       ++..+...
T Consensus       244 ~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  320 (375)
T 2vn8_A          244 KSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWA  320 (375)
T ss_dssp             HTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred             hhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEE
Confidence            553  4899999999986 4668889999998 99999986432100    0000     00111       22222221


Q ss_pred             eecCCCCCCCHHHHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          283 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      .  .....+.++++++++++|++.  +.++++|+++++++|++.+.+++. +|+|+++
T Consensus       321 ~--~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          321 F--FMASGPCLDDIAELVDAGKIR--PVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             C--CCCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             E--eCCCHHHHHHHHHHHHCCCcc--cCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence            1  111123578999999999875  567899999999999999988874 6999976

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.2e-41  Score=341.45  Aligned_cols=277  Identities=18%  Similarity=0.246  Sum_probs=232.4

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|+.|.... .+..+ .|.++|||++|+|+++|++|++|++||||++..                       
T Consensus       242 lV~V~a~gin~~D~~~~-~G~~~-~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~~~-----------------------  296 (795)
T 3slk_A          242 RIAMRAAGVNFRDALIA-LGMYP-GVASLGSEGAGVVVETGPGVTGLAPGDRVMGMI-----------------------  296 (795)
T ss_dssp             EEEEEEEEECHHHHHHT-TTCCS-SCCCSCCCEEEEEEEECSSCCSSCTTCEEEECC-----------------------
T ss_pred             EEEEEEEccCHHHHHHH-cCCCC-CCccccceeEEEEEEeCCCCCcCCCCCEEEEEe-----------------------
Confidence            58999999999996543 33333 367899999999999999999999999999762                       


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                                                 .|+|+||++++.+.++++|+++++++||++++++.|||+++.+.+++++|++|
T Consensus       297 ---------------------------~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~V  349 (795)
T 3slk_A          297 ---------------------------PKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESL  349 (795)
T ss_dssp             ---------------------------SSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCE
T ss_pred             ---------------------------cCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEE
Confidence                                       27999999999999999999999999999999999999999899999999999


Q ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChH
Q 019414          161 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID  238 (341)
Q Consensus       161 lI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~  238 (341)
                      ||+|+ |++|++++|+||.+|+ +|+++++++ |.+.++ +|+++++++++.+  +.+.+++.+++ |+|+|||++|+ +
T Consensus       350 LI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~~~~--~~~~i~~~t~g~GvDvVld~~gg-~  423 (795)
T 3slk_A          350 LVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSRTCD--FEQQFLGATGGRGVDVVLNSLAG-E  423 (795)
T ss_dssp             EEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSSSST--HHHHHHHHSCSSCCSEEEECCCT-T
T ss_pred             EEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecCChh--HHHHHHHHcCCCCeEEEEECCCc-H
Confidence            99986 9999999999999999 888887665 666666 9999999988776  99999999998 99999999987 7


Q ss_pred             HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCC---CCCCHHHHHHHHHCCCCCCCCceeeee
Q 019414          239 NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK---PRTDLPSVVDMYMNKQLELEKFITHRI  315 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~  315 (341)
                      .++.++++++++ |+++.+|............  ..+++++.+..+....   ..+.++++++++++|++.+  +++++|
T Consensus       424 ~~~~~l~~l~~~-Gr~v~iG~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p--~~~~~~  498 (795)
T 3slk_A          424 FADASLRMLPRG-GRFLELGKTDVRDPVEVAD--AHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEP--LPVTAW  498 (795)
T ss_dssp             TTHHHHTSCTTC-EEEEECCSTTCCCHHHHHH--HSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCC--CCEEEE
T ss_pred             HHHHHHHHhcCC-CEEEEeccccccCcccccc--cCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCC--CcceeE
Confidence            889999999998 9999999755433222211  2356666555432111   1136888999999998765  478999


Q ss_pred             cCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          316 PFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       316 ~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      +++++++||+.+.+++. +|+|++++
T Consensus       499 ~l~~~~eA~~~l~~g~~~GKvVl~~~  524 (795)
T 3slk_A          499 DVRQAPEALRHLSQARHVGKLVLTMP  524 (795)
T ss_dssp             EGGGHHHHHHHHHHTCCCBEEEEECC
T ss_pred             cHHHHHHHHHHHhcCCccceEEEecC
Confidence            99999999999998886 59999875

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=2.4e-41  Score=314.12  Aligned_cols=281  Identities=15%  Similarity=0.160  Sum_probs=225.7

Q ss_pred             CccccccCCcCcceeeeccCC------------------------------CCCCCccccccceEEEEEecCCC-CCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ------------------------------TPLFPRIFGHEAAGVVESVGEGV-SDLEV   49 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~------------------------------~~~~p~i~G~e~~G~V~~vG~~v-~~~~~   49 (341)
                      |||++++++|+.|+.......                              ..++|.++|||++|+|+++|++| ++|++
T Consensus        36 lVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~v  115 (379)
T 3iup_A           36 LIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALM  115 (379)
T ss_dssp             EEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTT
T ss_pred             EEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccccccccCCCccceeeeEEEEEEeCCCcccCCCC
Confidence            689999999999966543210                              23578999999999999999999 89999


Q ss_pred             CCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCC
Q 019414           50 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  129 (341)
Q Consensus        50 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~  129 (341)
                      ||||++.+                                                  .|+|+||+++|++.++++|+++
T Consensus       116 GdrV~~~~--------------------------------------------------~G~~aey~~v~~~~~~~iP~~~  145 (379)
T 3iup_A          116 GKTVAAIG--------------------------------------------------GAMYSQYRCIPADQCLVLPEGA  145 (379)
T ss_dssp             TCEEEECC--------------------------------------------------SCCSBSEEEEEGGGEEECCTTC
T ss_pred             CCEEEecC--------------------------------------------------CCcceeEEEeCHHHeEECCCCC
Confidence            99999873                                                  2799999999999999999999


Q ss_pred             CchhhhhccccchhhhhhhhhhcCCCCCCEEEEE--CCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC
Q 019414          130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF--GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  207 (341)
Q Consensus       130 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~--G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~  207 (341)
                      ++++||++++...|||+++ +... ++|++|||+  |+|++|++++|+|+.+|+ +|++++++++|+++++++|++.++|
T Consensus       146 ~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~  222 (379)
T 3iup_A          146 TPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQADLLKAQGAVHVCN  222 (379)
T ss_dssp             CHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHHHHHHHTTCSCEEE
T ss_pred             CHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCcEEEe
Confidence            9999999999999999765 4444 899999999  459999999999999999 8999999999999999999999999


Q ss_pred             CCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhc-----CC----------CcEEEEEccCCCCcccccccc
Q 019414          208 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVH-----DG----------WGVAVLVGVPSKDAVFMTKPI  271 (341)
Q Consensus       208 ~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~-----~~----------~g~~v~~g~~~~~~~~~~~~~  271 (341)
                      +++.+  +.+.+++.+++ ++|++|||+|++..++.++++++     ++          +|+++.+|.... .+.++. .
T Consensus       223 ~~~~~--~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~-~~~~~~-~  298 (379)
T 3iup_A          223 AASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDT-SPTEFN-R  298 (379)
T ss_dssp             TTSTT--HHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEE-EEEEEC-C
T ss_pred             CCChH--HHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCC-Cccccc-c
Confidence            98766  99999999987 99999999998778888888885     33          155555554321 122222 2


Q ss_pred             eeeecceEEEeeecCCCC---CC----CHHHHHHHHHCCCCCCCCceeeeecCCcH--HHHHHHHhcCCc-ceEEEecCC
Q 019414          272 NVLNERTLKGTFFGNYKP---RT----DLPSVVDMYMNKQLELEKFITHRIPFSEI--NKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       272 ~~~~~~~~~g~~~~~~~~---~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~i--~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      .+.+++++.|+.+..+..   .+    .++.+++++.+ .  +.+.++++|+|+++  ++|++.+.+++. +|+|+++++
T Consensus       299 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~  375 (379)
T 3iup_A          299 NFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-T--FASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNK  375 (379)
T ss_dssp             CSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-T--TCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred             ccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-c--CCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence            356788888876543210   01    23455555555 2  45567899999999  999999998875 699999863

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=3.1e-40  Score=304.57  Aligned_cols=281  Identities=16%  Similarity=0.218  Sum_probs=232.6

Q ss_pred             CccccccCCcCcceeeecc----CC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQ----GQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM   74 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~----~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~   74 (341)
                      |||++++|+|+.|+.....    ..  +..+|.++|||++|+|++  ++|++|++||||++..                 
T Consensus        46 lVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~--~~v~~~~vGdrV~~~~-----------------  106 (357)
T 2zb4_A           46 QVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEE--SKHTNLTKGDFVTSFY-----------------  106 (357)
T ss_dssp             EEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEEEEEEE--ECSTTCCTTCEEEEEE-----------------
T ss_pred             EEEEEEEecCHHHHhhccccccccccCCCCCCccccccEEEEEEe--cCCCCCCCCCEEEecC-----------------
Confidence            6899999999999643322    11  235789999999999999  8899999999999762                 


Q ss_pred             CccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCC-----Cchhhhhccccchhhhhhhh
Q 019414           75 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA-----PLDKVCILSCGVSTGLGATL  149 (341)
Q Consensus        75 c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~-----~~~~aa~l~~~~~ta~~~l~  149 (341)
                                                        |+|+||++++++.++++|+++     +++ +|+++++++|||+++.
T Consensus       107 ----------------------------------G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~  151 (357)
T 2zb4_A          107 ----------------------------------WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQ  151 (357)
T ss_dssp             ----------------------------------EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHH
T ss_pred             ----------------------------------CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHH
Confidence                                              689999999999999999999     555 7889999999999988


Q ss_pred             hhcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcC
Q 019414          150 NVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       150 ~~~~~~~g--~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      +.+++++|  ++|||+|+ |++|++++|+++..|+++|+++++++++.+.+++ +|++.++|+.+.+  +.+.+.+.+.+
T Consensus       152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~--~~~~~~~~~~~  229 (357)
T 2zb4_A          152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDN--VAEQLRESCPA  229 (357)
T ss_dssp             HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSC--HHHHHHHHCTT
T ss_pred             HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchH--HHHHHHHhcCC
Confidence            88999999  99999997 9999999999999998789999999999998887 9999999887655  88888888766


Q ss_pred             CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccc--------cceeeecceEEEeeecCCC--CCCCHH
Q 019414          226 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTK--------PINVLNERTLKGTFFGNYK--PRTDLP  294 (341)
Q Consensus       226 ~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~--------~~~~~~~~~~~g~~~~~~~--~~~~~~  294 (341)
                      ++|++||++|+ ..+++++++++++ |+++.+|..... ..++..        ...+.+++++.++....+.  ..++++
T Consensus       230 ~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  307 (357)
T 2zb4_A          230 GVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGIL  307 (357)
T ss_dssp             CEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHH
T ss_pred             CCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHH
Confidence            89999999986 7899999999998 999999875321 122211        1234578888887653321  124688


Q ss_pred             HHHHHHHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          295 SVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       295 ~~~~~~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      ++++++++|++.+.+  ...|+|+++++|++.+.+++. +|+|+++++
T Consensus       308 ~~~~l~~~g~l~~~~--~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  353 (357)
T 2zb4_A          308 QLSQWFKEGKLKIKE--TVINGLENMGAAFQSMMTGGNIGKQIVCISE  353 (357)
T ss_dssp             HHHHHHHTTCCCCCE--EEEECGGGHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             HHHHHHHcCCCcCcc--ceecCHHHHHHHHHHHHcCCCCceEEEEEec
Confidence            999999999988764  355999999999999988874 699998863

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-40  Score=303.99  Aligned_cols=284  Identities=16%  Similarity=0.173  Sum_probs=216.6

Q ss_pred             CccccccCCcCcceeeeccC--CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG--QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~--~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+......  ....+|.++|||++|+|+++  ++++|++||||++.+..                   
T Consensus        34 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~-------------------   92 (328)
T 1xa0_A           34 LVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRFREGDEVIATGYE-------------------   92 (328)
T ss_dssp             EEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSCCTTCEEEEESTT-------------------
T ss_pred             EEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCCCCCCEEEEcccc-------------------
Confidence            68999999999996643221  22457999999999999995  57899999999976310                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh--hhcCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--NVAKPER  156 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~~  156 (341)
                                    .          +....|+|+||+++|++.++++|+++++++||++++++.|||.++.  ...++++
T Consensus        93 --------------~----------g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  148 (328)
T 1xa0_A           93 --------------I----------GVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTP  148 (328)
T ss_dssp             --------------B----------TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred             --------------C----------CCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCC
Confidence                          0          0112379999999999999999999999999999999999998875  3467899


Q ss_pred             CC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          157 GS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       157 g~-~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      |+ +|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++|+.+.+   .+.+++.+++++|++||++
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~---~~~~~~~~~~~~d~vid~~  224 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDVM---AERIRPLDKQRWAAAVDPV  224 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC------------CCSCCEEEEEECS
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCcH---HHHHHHhcCCcccEEEECC
Confidence            97 9999997 9999999999999999 799999999999999999999999876532   2234455545899999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      |+ +.+++++++++++ |+++.+|..... ..++. ...+.+++++.|+.......   .+.++.++++++++ +.  + 
T Consensus       225 g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~--~-  297 (328)
T 1xa0_A          225 GG-RTLATVLSRMRYG-GAVAVSGLTGGAEVPTTV-HPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LE--R-  297 (328)
T ss_dssp             TT-TTHHHHHHTEEEE-EEEEECSCCSSSCCCCCS-HHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HH--H-
T ss_pred             cH-HHHHHHHHhhccC-CEEEEEeecCCCCCCCch-hhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Cc--e-
Confidence            98 6899999999998 999999975432 12222 12346889998874322110   01244455555555 42  3 


Q ss_pred             eeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          311 ITHRIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      ++++|+++++++|++.+.+++. +|+|++++
T Consensus       298 ~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          298 IAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            4699999999999999988875 69999864

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=3.1e-41  Score=308.04  Aligned_cols=285  Identities=16%  Similarity=0.180  Sum_probs=219.8

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+.......  ...+|.++|||++|+|+++  ++++|++||||++.+..                   
T Consensus        35 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~~~~vGdrV~~~~~~-------------------   93 (330)
T 1tt7_A           35 LIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDPRFAEGDEVIATSYE-------------------   93 (330)
T ss_dssp             EEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SSTTCCTTCEEEEESTT-------------------
T ss_pred             EEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCCCCCCCCEEEEcccc-------------------
Confidence            689999999999966543221  2357999999999999996  46889999999976310                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh--hhcCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL--NVAKPER  156 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~--~~~~~~~  156 (341)
                                    .          +....|+|+||+++|++.++++|+++++++||++++++.|||.++.  ...++++
T Consensus        94 --------------~----------g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~  149 (330)
T 1tt7_A           94 --------------L----------GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSP  149 (330)
T ss_dssp             --------------B----------TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred             --------------c----------CCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCC
Confidence                          0          0112379999999999999999999999999999999999998865  3467899


Q ss_pred             CC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          157 GS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       157 g~-~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      |+ +|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|++.++|+++.+   .+.+++.+++++|++|||+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~---~~~~~~~~~~~~d~vid~~  225 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY---DGTLKALSKQQWQGAVDPV  225 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---SSCCCSSCCCCEEEEEESC
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCch---HHHHHHhhcCCccEEEECC
Confidence            97 9999997 9999999999999999 799999999999999999999988764211   0112233344899999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCCCCCCCc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQLELEKF  310 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~  310 (341)
                      |+ +.+++++++++++ |+++.+|..... ..++. ...+.+++++.|+.......   .+.++.+++++.++++  .++
T Consensus       226 g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l--~~~  300 (330)
T 1tt7_A          226 GG-KQLASLLSKIQYG-GSVAVSGLTGGGEVPATV-YPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQL--LTI  300 (330)
T ss_dssp             CT-HHHHHHHTTEEEE-EEEEECCCSSCSCEEECS-HHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCS--TTS
T ss_pred             cH-HHHHHHHHhhcCC-CEEEEEecCCCCccCcch-HHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCc--ccc
Confidence            98 6899999999998 999999976532 22222 12346889998874322110   1234455556666765  455


Q ss_pred             eeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          311 ITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       311 ~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      ++++|+++++++|++.+.+++. +|+|+++
T Consensus       301 i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          301 VDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             EEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             cceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            7899999999999999988775 6999864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1e-38  Score=293.19  Aligned_cols=281  Identities=17%  Similarity=0.212  Sum_probs=226.6

Q ss_pred             CccccccCCcCcceeeeccCCC----CCCCccccccceEEEEE--ecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT----PLFPRIFGHEAAGVVES--VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM   74 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~----~~~p~i~G~e~~G~V~~--vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~   74 (341)
                      |||++++|+|+.|+.+......    ..+|.++|||++|+|++  +|+++++|++||||++.                  
T Consensus        42 lVkv~a~g~~~~~~~~~g~~~~~~~~~~~p~v~G~e~~G~~~~GvV~~~v~~~~vGdrV~~~------------------  103 (345)
T 2j3h_A           42 LVKNLYLSCDPYMRIRMGKPDPSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGI------------------  103 (345)
T ss_dssp             EEEECEEECCTTHHHHHBC---------CCCCTTSBCEEEEEEEEEEECSTTCCTTCEEEEE------------------
T ss_pred             EEEEEEecCCHHHHhhcccCCCCccccCCCcCCCCeeecceEEEEEecCCCCCCCCCEEEee------------------
Confidence            6899999999998543222111    13689999999999999  99999999999999976                  


Q ss_pred             CccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCc--eEECCC---CCCchhhhhccccchhhhhhhh
Q 019414           75 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC--VAKINP---LAPLDKVCILSCGVSTGLGATL  149 (341)
Q Consensus        75 c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~--~~~lp~---~~~~~~aa~l~~~~~ta~~~l~  149 (341)
                                                        |+|+||++++++.  ++++|+   .++++ +|+++++++|||+++.
T Consensus       104 ----------------------------------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~  148 (345)
T 2j3h_A          104 ----------------------------------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFY  148 (345)
T ss_dssp             ----------------------------------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHH
T ss_pred             ----------------------------------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHH
Confidence                                              6899999999877  999996   35555 6889999999999988


Q ss_pred             hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414          150 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      +.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++ ++|++.++|+.+.+ ++.+.+++.+++++
T Consensus       149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~-~~~~~~~~~~~~~~  226 (345)
T 2j3h_A          149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEES-DLTAALKRCFPNGI  226 (345)
T ss_dssp             TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEETTSCS-CSHHHHHHHCTTCE
T ss_pred             HHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEecCCHH-HHHHHHHHHhCCCC
Confidence            8889999999999997 9999999999999999 8999999999999998 79999888876531 26677777775689


Q ss_pred             cEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC------CcccccccceeeecceEEEeeecCCCC--CCCHHHHHHH
Q 019414          228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK------DAVFMTKPINVLNERTLKGTFFGNYKP--RTDLPSVVDM  299 (341)
Q Consensus       228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~  299 (341)
                      |++||++|. +.++.++++++++ |+++.+|....      ...++. ...+.+++++.|+....+..  .+.+++++++
T Consensus       227 d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l  303 (345)
T 2j3h_A          227 DIYFENVGG-KMLDAVLVNMNMH-GRIAVCGMISQYNLENQEGVHNL-SNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPH  303 (345)
T ss_dssp             EEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGTTCSSCCCBSCT-THHHHHTCEEEECCGGGGGGGHHHHHHHHHHH
T ss_pred             cEEEECCCH-HHHHHHHHHHhcC-CEEEEEccccccccCCccccccH-HHHhhhceeeceeeehhhhhhHHHHHHHHHHH
Confidence            999999987 7899999999998 99999986542      111222 22345788888875443211  1238889999


Q ss_pred             HHCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecCC
Q 019414          300 YMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISMED  341 (341)
Q Consensus       300 ~~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~~  341 (341)
                      +++|++.+  .+...|+|+++++|++.+.+++. +|+|+.+++
T Consensus       304 ~~~g~i~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  344 (345)
T 2j3h_A          304 IREGKITY--VEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR  344 (345)
T ss_dssp             HHTTSSCC--CEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred             HHCCCCcC--cccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            99998864  45668999999999999998875 599998863

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=2.2e-38  Score=289.56  Aligned_cols=275  Identities=16%  Similarity=0.213  Sum_probs=224.9

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|+.|+.+   ..+..+|.++|||++|+|++.  ++++|++||||++.                        
T Consensus        42 lVkv~a~gi~~~~~~~---~~~~~~p~~~g~e~~G~Vv~~--~v~~~~vGdrV~~~------------------------   92 (333)
T 1v3u_A           42 LLEALFLSVDPYMRIA---SKRLKEGAVMMGQQVARVVES--KNSAFPAGSIVLAQ------------------------   92 (333)
T ss_dssp             EEEEEEEECCTHHHHH---TTTCCTTSBCCCCEEEEEEEE--SCTTSCTTCEEEEC------------------------
T ss_pred             EEEEEEeccCHHHccc---cCcCCCCcccccceEEEEEec--CCCCCCCCCEEEec------------------------
Confidence            6899999999987522   123356889999999999995  68899999999976                        


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCC----CCchh-hhhccccchhhhhhhhhhcCCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL----APLDK-VCILSCGVSTGLGATLNVAKPE  155 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~----~~~~~-aa~l~~~~~ta~~~l~~~~~~~  155 (341)
                                                  |+|+||++++++.++++|++    +++++ +|+++++++|||+++.+..+++
T Consensus        93 ----------------------------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~  144 (333)
T 1v3u_A           93 ----------------------------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVK  144 (333)
T ss_dssp             ----------------------------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCC
T ss_pred             ----------------------------CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCC
Confidence                                        68999999999999999997    88887 5899999999999988888999


Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhcCCccEEEec
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      +|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++++|++.++|..+ .+  +.+.+.+.+.+++|++||+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~--~~~~~~~~~~~~~d~vi~~  221 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVNS--LEEALKKASPDGYDCYFDN  221 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCSC--HHHHHHHHCTTCEEEEEES
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCCHHH--HHHHHHHHhCCCCeEEEEC
Confidence            9999999997 9999999999999999 8999999999999999999998888876 44  7788888776689999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCc----c--cccccceeeecceEEEeeecCCCC---CCCHHHHHHHHHCCC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDA----V--FMTKPINVLNERTLKGTFFGNYKP---RTDLPSVVDMYMNKQ  304 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~----~--~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~  304 (341)
                      +|. ..+++++++++++ |+++.+|......    .  .......+.+++++.|+....+..   .+.++++++++++|+
T Consensus       222 ~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~  299 (333)
T 1v3u_A          222 VGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGK  299 (333)
T ss_dssp             SCH-HHHHHHHTTEEEE-EEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTS
T ss_pred             CCh-HHHHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCC
Confidence            987 6789999999998 9999999754311    1  111122346889998876543311   235778999999998


Q ss_pred             CCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          305 LELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       305 i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +.+...  ..++++++++|++.+.+++. +|+|+++
T Consensus       300 l~~~~~--~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          300 IQYHEH--VTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             SCCCEE--EEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             ccCccc--cccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            877643  44799999999999988774 6999864

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.8e-39  Score=292.70  Aligned_cols=264  Identities=17%  Similarity=0.246  Sum_probs=214.2

Q ss_pred             CccccccCCcCcceeeeccCCC--CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|+........  +.+|.++|||++|+|+           ||||++.+.                    
T Consensus        29 lVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------GdrV~~~~~--------------------   77 (302)
T 1iz0_A           29 VLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------GRRYAALVP--------------------   77 (302)
T ss_dssp             EEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------TEEEEEECS--------------------
T ss_pred             EEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------CcEEEEecC--------------------
Confidence            6899999999999665433222  3679999999999998           999997631                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|+||+++|++.++++|+++++++||++++++.|||+++.+.. +++|+
T Consensus        78 -----------------------------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~  127 (302)
T 1iz0_A           78 -----------------------------QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGE  127 (302)
T ss_dssp             -----------------------------SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTC
T ss_pred             -----------------------------CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCC
Confidence                                         279999999999999999999999999999999999999987777 99999


Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC-CChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~-~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++|+++ .+  +.+.+     +++|++|| +|+
T Consensus       128 ~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~--~~~~~-----~~~d~vid-~g~  198 (302)
T 1iz0_A          128 KVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEVPE--RAKAW-----GGLDLVLE-VRG  198 (302)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGGHHH--HHHHT-----TSEEEEEE-CSC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCcchh--HHHHh-----cCceEEEE-CCH
Confidence            9999997 9999999999999999 9999999999999999999999887754 22  44433     57999999 988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeecCCC-CCCCHHHHHH---HHHCCCCCCCCce
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFGNYK-PRTDLPSVVD---MYMNKQLELEKFI  311 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~---~~~~~~i~~~~~~  311 (341)
                       +.++.++++++++ |+++.+|...... .++. ...+.+++++.|+....+. ..++++++++   ++.++++.  +.+
T Consensus       199 -~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i  273 (302)
T 1iz0_A          199 -KEVEESLGLLAHG-GRLVYIGAAEGEVAPIPP-LRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELR--PVV  273 (302)
T ss_dssp             -TTHHHHHTTEEEE-EEEEEC-------CCCCT-THHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBC--CCE
T ss_pred             -HHHHHHHHhhccC-CEEEEEeCCCCCCCCcCH-HHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcc--ccc
Confidence             7899999999998 9999998754421 2222 2235688999887653221 1246888899   99999775  557


Q ss_pred             eeeecCCcHHHHHHHHhcCCc-ceEEEec
Q 019414          312 THRIPFSEINKAFEYMVKGEG-LRCIISM  339 (341)
Q Consensus       312 ~~~~~~~~i~ea~~~~~~~~~-~k~vl~~  339 (341)
                      +++|+++++++|++.+.+++. +|+|+++
T Consensus       274 ~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          274 GPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             EEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             ceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            899999999999999988765 6999864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.97  E-value=5.5e-32  Score=297.30  Aligned_cols=274  Identities=16%  Similarity=0.221  Sum_probs=220.0

Q ss_pred             CccccccCCcCcceeeeccCCC--------CCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT--------PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVS   72 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~--------~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~   72 (341)
                      +||++++|+|+.|.........        ...|.++|+|++|+|.          +||||++...              
T Consensus      1563 lVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV~g~~~-------------- 1618 (2512)
T 2vz8_A         1563 LCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRVMGMVP-------------- 1618 (2512)
T ss_dssp             EEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCEEEECS--------------
T ss_pred             EEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEEEEeec--------------
Confidence            4789999999999665332211        1245789999999873          7999987621              


Q ss_pred             CCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhc
Q 019414           73 NMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  152 (341)
Q Consensus        73 ~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~  152 (341)
                                                         .|+|+||+++|++.++++|+++++++||+++++++|||+++.+.+
T Consensus      1619 -----------------------------------~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a 1663 (2512)
T 2vz8_A         1619 -----------------------------------AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRG 1663 (2512)
T ss_dssp             -----------------------------------SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTT
T ss_pred             -----------------------------------CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHh
Confidence                                               269999999999999999999999999999999999999998889


Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcC-C
Q 019414          153 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG-G  226 (341)
Q Consensus       153 ~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~-~  226 (341)
                      ++++|++|||+|+ |++|++++|+||..|+ +|++++.+++|++.+++    +|+++++++++.+  +.+.+++.+++ +
T Consensus      1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~--~~~~i~~~t~g~G 1740 (2512)
T 2vz8_A         1664 RMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSRDTS--FEQHVLRHTAGKG 1740 (2512)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSH--HHHHHHHTTTSCC
T ss_pred             cCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCCCHH--HHHHHHHhcCCCC
Confidence            9999999999986 9999999999999999 89999999999999886    7889999887655  88899998887 9


Q ss_pred             ccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCC--CCCHHHHHHHH----
Q 019414          227 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP--RTDLPSVVDMY----  300 (341)
Q Consensus       227 ~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~----  300 (341)
                      +|+|||+++ .+.++.++++++++ |+++.+|..............+.+++++.++.......  ...++++++++    
T Consensus      1741 vDvVld~~g-~~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~ 1818 (2512)
T 2vz8_A         1741 VDLVLNSLA-EEKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGI 1818 (2512)
T ss_dssp             EEEEEECCC-HHHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHH
T ss_pred             ceEEEECCC-chHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHH
Confidence            999999997 58899999999998 99999985321111111123356788888876543211  12455555555    


Q ss_pred             HCCCCCCCCceeeeecCCcHHHHHHHHhcCCc-ceEEEecC
Q 019414          301 MNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME  340 (341)
Q Consensus       301 ~~~~i~~~~~~~~~~~~~~i~ea~~~~~~~~~-~k~vl~~~  340 (341)
                      .++++.  ++++++|+++++++|++.+.+++. +|+|++++
T Consensus      1819 ~~g~l~--p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A         1819 QEGVVQ--PLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp             TTTCSC--CCCEEEEESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred             HcCCcC--CCcceEecHHHHHHHHHhhhccCccceEEEECC
Confidence            456554  457899999999999999998886 59999875

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.89  E-value=3.6e-23  Score=174.61  Aligned_cols=184  Identities=20%  Similarity=0.232  Sum_probs=136.7

Q ss_pred             CceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 019414          120 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  198 (341)
Q Consensus       120 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~  198 (341)
                      +.++++|+++++++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            5688999999999999999999999999878889999999999995 9999999999999999 8999999999999999


Q ss_pred             HcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecc
Q 019414          199 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER  277 (341)
Q Consensus       199 ~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~  277 (341)
                      ++|++.++|..+.+  +.+.+.+.+.+ ++|++||++|. +.++.++++++++ |+++.+|..............+.+++
T Consensus        81 ~~g~~~~~d~~~~~--~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  156 (198)
T 1pqw_A           81 RLGVEYVGDSRSVD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSA  156 (198)
T ss_dssp             TTCCSEEEETTCST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTC
T ss_pred             HcCCCEEeeCCcHH--HHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC-CEEEEEcCCCCcCcCcCChhHhcCCc
Confidence            99998888877655  77788777765 89999999975 7889999999998 99999987542111111112234677


Q ss_pred             eEEEeee------cCCCCCCCHHHHHHHHHCCCCCCC
Q 019414          278 TLKGTFF------GNYKPRTDLPSVVDMYMNKQLELE  308 (341)
Q Consensus       278 ~~~g~~~------~~~~~~~~~~~~~~~~~~~~i~~~  308 (341)
                      ++.+...      ......+.++++++++++|++.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          157 SFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             EEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             EEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            7765432      110012468889999999988765

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.27  E-value=1.2e-12  Score=113.47  Aligned_cols=169  Identities=10%  Similarity=0.041  Sum_probs=110.4

Q ss_pred             CCCCCEEEecc-------cCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeec
Q 019414           47 LEVGDHVLPVF-------TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  119 (341)
Q Consensus        47 ~~~Gd~V~~~~-------~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~  119 (341)
                      +++||||++.+       ...||.|.+|+.|.++.|+.....                          .|+..++     
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~--------------------------~G~~~~~-----   52 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP--------------------------EGVKING-----   52 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC--------------------------TTEEETT-----
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC--------------------------CCCEEEE-----
Confidence            89999999998       778999999999988888764210                          1222223     


Q ss_pred             CceEECCCCCCchhh-----hhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019414          120 GCVAKINPLAPLDKV-----CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  194 (341)
Q Consensus       120 ~~~~~lp~~~~~~~a-----a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~  194 (341)
                       .+++.|+...+.+.     +.+..+...+  .+.....+.++++||.+|+| .|..++.+++. +. +|++++.+++..
T Consensus        53 -~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~  126 (248)
T 2yvl_A           53 -FEVYRPTLEEIILLGFERKTQIIYPKDSF--YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFY  126 (248)
T ss_dssp             -EEEECCCHHHHHHHTSCCSSCCCCHHHHH--HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHH
T ss_pred             -EEEeCCCHHHHHHhcCcCCCCcccchhHH--HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHH
Confidence             33333432111111     1111121222  23566788999999999998 59999999988 65 999999999998


Q ss_pred             HHHHHc----CC-ceecCCCCCChhHHHHHHHH-hcCCccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEcc
Q 019414          195 EEAKKF----GV-TDFVNTSEHDRPIQEVIAEM-TNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       195 ~~~~~~----g~-~~vv~~~~~~~~~~~~i~~~-~~~~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +.+++.    +. +.+- ....+  +.+   .. .++++|+|+...+.+ ..++.+.+.|+++ |+++....
T Consensus       127 ~~a~~~~~~~~~~~~~~-~~~~d--~~~---~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          127 KTAQKNLKKFNLGKNVK-FFNVD--FKD---AEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHHHHHHTTCCTTEE-EECSC--TTT---SCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHHHHHHcCCCCcEE-EEEcC--hhh---cccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            877763    43 1111 11111  111   01 123799999877765 6899999999998 99988764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=99.00  E-value=7.2e-12  Score=116.56  Aligned_cols=182  Identities=18%  Similarity=0.175  Sum_probs=129.3

Q ss_pred             ccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccccCcccccccCCCcccccCCCcccccc
Q 019414           27 RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFL  106 (341)
Q Consensus        27 ~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  106 (341)
                      ...|+|.++.|..+|+++.++.+|++++......                                 ++.       ...
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~---------------------------------~~~-------~~~  114 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKK---------------------------------AYD-------RAA  114 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH---------------------------------HHH-------HHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHH---------------------------------HHH-------HHH
Confidence            3489999999999999999999999975321000                                 000       000


Q ss_pred             CCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhc---CCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Q 019414          107 GTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASR  183 (341)
Q Consensus       107 ~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~  183 (341)
                      ..|++++|+..+...++.+|++++.++++. ..++.++|+++....   .-.+|++|+|+|+|.+|.++++.++..|+.+
T Consensus       115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~  193 (404)
T 1gpj_A          115 RLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRA  193 (404)
T ss_dssp             HHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSE
T ss_pred             HcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCE
Confidence            125778888888888999999888777554 457788888753222   1257999999999999999999999999889


Q ss_pred             EEEEcCChhhH-HHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHHH--HHHHH--h--cCCCcEEEE
Q 019414          184 IIGVDRSSKRF-EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMI--SAFEC--V--HDGWGVAVL  256 (341)
Q Consensus       184 vv~v~~~~~~~-~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~--~~~~~--l--~~~~g~~v~  256 (341)
                      |++++++.++. ++++++|++ ++++.+    +.+.+     .++|+|++|++.+..+.  ..+..  +  +++ +.+++
T Consensus       194 V~v~~r~~~ra~~la~~~g~~-~~~~~~----l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~  262 (404)
T 1gpj_A          194 VLVANRTYERAVELARDLGGE-AVRFDE----LVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILI  262 (404)
T ss_dssp             EEEECSSHHHHHHHHHHHTCE-ECCGGG----HHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEE
T ss_pred             EEEEeCCHHHHHHHHHHcCCc-eecHHh----HHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEE
Confidence            99999999886 678889886 333321    33332     25999999998654331  34554  3  455 66677


Q ss_pred             EccC
Q 019414          257 VGVP  260 (341)
Q Consensus       257 ~g~~  260 (341)
                      ++..
T Consensus       263 vdia  266 (404)
T 1gpj_A          263 IDIA  266 (404)
T ss_dssp             EECC
T ss_pred             EEcc
Confidence            7654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.66  E-value=6.5e-08  Score=88.47  Aligned_cols=137  Identities=21%  Similarity=0.164  Sum_probs=93.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      +++|+|+|+|++|+++++.++.+|+ +|+++++++++.+.++++++..  +++....  ++.+.+.     ++|+||+|+
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSA--EIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHH--HHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHH--HHHHHHc-----CCCEEEECC
Confidence            4899999999999999999999999 9999999999999998877654  2222211  1333222     599999999


Q ss_pred             CChHH------HHHHHHHhcCCCcEEEEEccCCCC-------cccccccceeeecceEEEeeecCCC-C--------CCC
Q 019414          235 GNIDN------MISAFECVHDGWGVAVLVGVPSKD-------AVFMTKPINVLNERTLKGTFFGNYK-P--------RTD  292 (341)
Q Consensus       235 g~~~~------~~~~~~~l~~~~g~~v~~g~~~~~-------~~~~~~~~~~~~~~~~~g~~~~~~~-~--------~~~  292 (341)
                      +.+..      .+..++.++++ ++++.++.....       ..++. +....+++++.+....... +        ...
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~-~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~  316 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQ-PTYEVFGVVHYGVPNMPGAVPWTATQALNNST  316 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSS-CEEEETTEEEECCSCGGGGCHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCC-CEEEECCEEEEEeCCcchhhHHHHHHHHHHHH
Confidence            86542      56778889997 999999865432       11221 2334567777664321110 0        123


Q ss_pred             HHHHHHHHHCC
Q 019414          293 LPSVVDMYMNK  303 (341)
Q Consensus       293 ~~~~~~~~~~~  303 (341)
                      ++.+++++.+|
T Consensus       317 ~~~l~~l~~~G  327 (361)
T 1pjc_A          317 LPYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHHG
T ss_pred             HHHHHHHHhCC
Confidence            45677777766

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.61  E-value=2.5e-07  Score=85.34  Aligned_cols=166  Identities=15%  Similarity=0.155  Sum_probs=104.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCC-------------Chh----HHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH-------------DRP----IQE  217 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~-------------~~~----~~~  217 (341)
                      ++++|+|+|+|.+|++++++++.+|+ +|+++++++++.+.++++|++.+ ++..+.             +.+    ..+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 79999999999999989998755 233210             000    112


Q ss_pred             HHHHHhcCCccEEEecc---CChH--H-HHHHHHHhcCCCcEEEEEccCC-CCcccc-cccceeeecceEEEeeecCCCC
Q 019414          218 VIAEMTNGGVDRSVECT---GNID--N-MISAFECVHDGWGVAVLVGVPS-KDAVFM-TKPINVLNERTLKGTFFGNYKP  289 (341)
Q Consensus       218 ~i~~~~~~~~d~vld~~---g~~~--~-~~~~~~~l~~~~g~~v~~g~~~-~~~~~~-~~~~~~~~~~~~~g~~~~~~~~  289 (341)
                      .+.+... ++|+||+|+   |.+.  . .+..++.++++ +.++.++... ...... .......+++++.+.....   
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p---  324 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVP---  324 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGG---
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCc---
Confidence            2333333 699999999   5322  2 36788899997 9999998643 222111 1123345788887754322   


Q ss_pred             CCCHHHHHHHHHCCCCCCCCcee-e---eecCCcHHHHHHHH
Q 019414          290 RTDLPSVVDMYMNKQLELEKFIT-H---RIPFSEINKAFEYM  327 (341)
Q Consensus       290 ~~~~~~~~~~~~~~~i~~~~~~~-~---~~~~~~i~ea~~~~  327 (341)
                      ....+...+++.++.+.....+. .   .+.++.-.+.++..
T Consensus       325 ~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  366 (384)
T 1l7d_A          325 SRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGT  366 (384)
T ss_dssp             GGGHHHHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHHH
T ss_pred             chhHHHHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhcC
Confidence            13345577777776543221221 1   34444445555543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.52  E-value=6e-07  Score=83.08  Aligned_cols=125  Identities=20%  Similarity=0.212  Sum_probs=84.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceec-CCCC---C--------ChhH----HHHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSE---H--------DRPI----QEVI  219 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv-~~~~---~--------~~~~----~~~i  219 (341)
                      ++++|+|+|+|.+|++++++|+.+|+ +|++++++.++.+.++++|++.+. +..+   .        +.++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58899999999999999999999999 899999999999989999987542 2110   0        0001    1123


Q ss_pred             HHHhcCCccEEEeccCCh-----HHH-HHHHHHhcCCCcEEEEEccC-CCCccccccc--ceeeecceEEEee
Q 019414          220 AEMTNGGVDRSVECTGNI-----DNM-ISAFECVHDGWGVAVLVGVP-SKDAVFMTKP--INVLNERTLKGTF  283 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g~~-----~~~-~~~~~~l~~~~g~~v~~g~~-~~~~~~~~~~--~~~~~~~~~~g~~  283 (341)
                      .+... ++|+||++++.+     ..+ +..++.++++ +.++.++.. ..........  ....+++++.|..
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeC
Confidence            33322 589999995321     223 5788899997 999999864 2222222211  2345788888754

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.47  E-value=7.7e-07  Score=81.75  Aligned_cols=97  Identities=19%  Similarity=0.176  Sum_probs=74.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      +|++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|+...++.... .++.+.+.     ++|+|++|+
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~-~~l~~~l~-----~aDvVi~~~  239 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSSA-YELEGAVK-----RADLVIGAV  239 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECCH-HHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCCH-HHHHHHHc-----CCCEEEECC
Confidence            57899999999999999999999999 99999999999888877 676532222111 11332222     489999998


Q ss_pred             CChHH------HHHHHHHhcCCCcEEEEEccC
Q 019414          235 GNIDN------MISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       235 g~~~~------~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +.+..      .+..++.++++ +.++.++..
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~  270 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPG-AVLVDIAID  270 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGG
T ss_pred             CcCCCCCcceecHHHHhcCCCC-cEEEEEecC
Confidence            76543      57788899997 999999853

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.37  E-value=1.4e-06  Score=82.13  Aligned_cols=106  Identities=24%  Similarity=0.276  Sum_probs=83.4

Q ss_pred             chhhhhhhhhhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHH
Q 019414          141 VSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI  219 (341)
Q Consensus       141 ~~ta~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i  219 (341)
                      ..++|+++.+.. ...+|++|+|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++++|++ +++       +.+.+
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~~-------l~e~l  327 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VVT-------VEEAI  327 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHHHG
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Eec-------HHHHH
Confidence            344555543322 26789999999999999999999999999 999999999998888899986 321       32221


Q ss_pred             HHHhcCCccEEEeccCChHHHH-HHHHHhcCCCcEEEEEccCC
Q 019414          220 AEMTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~  261 (341)
                           .+.|+|+++++....+. +.++.++++ ++++.+|...
T Consensus       328 -----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~  364 (494)
T 3ce6_A          328 -----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD  364 (494)
T ss_dssp             -----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG
T ss_pred             -----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC
Confidence                 25899999999876665 788999997 9999998643

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.34  E-value=2.1e-06  Score=78.65  Aligned_cols=98  Identities=24%  Similarity=0.251  Sum_probs=70.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      ++++|+|+|+|.+|+++++.++.+|+ +|+++++++++.+.+++ +|.....+..+. ..+.+.+.     ++|++++++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~-~~l~~~~~-----~~DvVi~~~  237 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTATE-ANIKKSVQ-----HADLLIGAV  237 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECCH-HHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCCH-HHHHHHHh-----CCCEEEECC
Confidence            46899999999999999999999999 99999999999887766 776532322221 11333322     489999999


Q ss_pred             CChHH------HHHHHHHhcCCCcEEEEEccCC
Q 019414          235 GNIDN------MISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       235 g~~~~------~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +.+..      .+..++.++++ |+++.++...
T Consensus       238 g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~  269 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQ  269 (369)
T ss_dssp             C-------CCSCHHHHTTSCTT-CEEEECC---
T ss_pred             CCCccccchhHHHHHHHhhcCC-CEEEEEecCC
Confidence            86432      56788889997 9999998653

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.26  E-value=1.5e-06  Score=76.24  Aligned_cols=104  Identities=18%  Similarity=0.231  Sum_probs=73.1

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHc----CC-ceecCCCCCChhHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF----GV-TDFVNTSEHDRPIQEVIAE  221 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~----g~-~~vv~~~~~~~~~~~~i~~  221 (341)
                      +.....+.++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++.    +. +.+ .....+  +.+.   
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v-~~~~~d--~~~~---  176 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERV-TIKVRD--ISEG---  176 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGE-EEECCC--GGGC---
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCE-EEEECC--HHHc---
Confidence            45567889999999999876 888889999864 34999999999988877653    54 221 111112  1111   


Q ss_pred             HhcCCccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEcc
Q 019414          222 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       222 ~~~~~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +..+.+|+|+-....+ ..++.+.+.|+++ |+++....
T Consensus       177 ~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          177 FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            1223799998655554 6788999999998 99888753

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.16  E-value=1.3e-06  Score=76.15  Aligned_cols=94  Identities=18%  Similarity=0.175  Sum_probs=69.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .++.+||.+|+|. |..+..+++.. +. .|++++.+++..+.+++.+... ++..+..+  +     ...++.||+|+.
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~--~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHR--L-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTS--C-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcchhh--C-----CCCCCceeEEEE
Confidence            6789999999987 88899999986 56 9999999999999988865432 21111111  0     112247999995


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      . .....++.+.+.|+|+ |+++....
T Consensus       155 ~-~~~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          155 I-YAPCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             E-SCCCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             e-CChhhHHHHHHhcCCC-cEEEEEEc
Confidence            4 3457899999999998 99988754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.08  E-value=2.7e-05  Score=71.41  Aligned_cols=125  Identities=17%  Similarity=0.183  Sum_probs=82.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCC-------------CCC-ChhH----HH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT-------------SEH-DRPI----QE  217 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~-------------~~~-~~~~----~~  217 (341)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++.+++.++++.++++|++.+...             ... ..++    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67899999999999999999999999 89999999999999999998643211             000 0001    11


Q ss_pred             HHHHHhcCCccEEEeccCCh-----H-HHHHHHHHhcCCCcEEEEEccCC-CCcccc-cccceeeecceEEEee
Q 019414          218 VIAEMTNGGVDRSVECTGNI-----D-NMISAFECVHDGWGVAVLVGVPS-KDAVFM-TKPINVLNERTLKGTF  283 (341)
Q Consensus       218 ~i~~~~~~~~d~vld~~g~~-----~-~~~~~~~~l~~~~g~~v~~g~~~-~~~~~~-~~~~~~~~~~~~~g~~  283 (341)
                      .+.+.. .+.|+||.|+..+     . ..+..++.++++ +.++.+.... ++.... ....+..+++++.+..
T Consensus       268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTCSBTTCCTTEEEEETTEEEEECS
T ss_pred             HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCCCccccCCCCeEEECCEEEEEeC
Confidence            222221 2699999985322     1 246788899997 9999998532 222111 1112234677776654

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.04  E-value=1.2e-05  Score=70.62  Aligned_cols=101  Identities=16%  Similarity=0.120  Sum_probs=74.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcC
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ..++++++++||.+|+|..++.++.+|+..|+ +|++++.+++..+.+++.    |.+.+ .....+  ..    ++.++
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~gD--a~----~l~d~  187 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGV-NVITGD--ET----VIDGL  187 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSE-EEEESC--GG----GGGGC
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCe-EEEECc--hh----hCCCC
Confidence            34688999999999998878888888888898 999999999998887764    54322 111122  11    12345


Q ss_pred             CccEEEeccCCh---HHHHHHHHHhcCCCcEEEEEcc
Q 019414          226 GVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       226 ~~d~vld~~g~~---~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .||+|+.....+   ..++.+.+.|+|+ |+++....
T Consensus       188 ~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          188 EFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             CCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             CcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            899998654432   5788999999998 99998764

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.03  E-value=1.6e-05  Score=63.24  Aligned_cols=93  Identities=18%  Similarity=0.217  Sum_probs=64.7

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      ....++.+|+|+|+|.+|+..++.++..|. .|+++++++++.+.++ +.|...+. .+..+   .+.+.+..-.++|+|
T Consensus        14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d~~~---~~~l~~~~~~~ad~V   88 (155)
T 2g1u_A           14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GDAAE---FETLKECGMEKADMV   88 (155)
T ss_dssp             ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SCTTS---HHHHHTTTGGGCSEE
T ss_pred             hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ecCCC---HHHHHHcCcccCCEE
Confidence            345678899999999999999999999998 8999999999887776 66665332 22122   122332212369999


Q ss_pred             EeccCChHHHHHHHHHhcC
Q 019414          231 VECTGNIDNMISAFECVHD  249 (341)
Q Consensus       231 ld~~g~~~~~~~~~~~l~~  249 (341)
                      |.+++.......+...++.
T Consensus        89 i~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           89 FAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EECSSCHHHHHHHHHHHHH
T ss_pred             EEEeCCcHHHHHHHHHHHH
Confidence            9999986665555555554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.93  E-value=7.9e-05  Score=55.79  Aligned_cols=93  Identities=17%  Similarity=0.196  Sum_probs=63.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +.+|+|+|+|.+|..+++.+...|..+|+++++++++.+.+...+...+ .|..+     .+.+.+.. .++|+||++++
T Consensus         5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~~~d~vi~~~~   78 (118)
T 3ic5_A            5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKD-----EAGLAKAL-GGFDAVISAAP   78 (118)
T ss_dssp             CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTC-----HHHHHHHT-TTCSEEEECSC
T ss_pred             cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCC-----HHHHHHHH-cCCCEEEECCC
Confidence            4679999999999999999999993389999999999888876666543 23322     12333332 36999999997


Q ss_pred             ChHHHHHHHHHhcCCCcEEEE
Q 019414          236 NIDNMISAFECVHDGWGVAVL  256 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~  256 (341)
                      ..........+...+ -.++.
T Consensus        79 ~~~~~~~~~~~~~~g-~~~~~   98 (118)
T 3ic5_A           79 FFLTPIIAKAAKAAG-AHYFD   98 (118)
T ss_dssp             GGGHHHHHHHHHHTT-CEEEC
T ss_pred             chhhHHHHHHHHHhC-CCEEE
Confidence            644444444444443 44443

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.92  E-value=7.8e-06  Score=73.83  Aligned_cols=105  Identities=18%  Similarity=0.201  Sum_probs=68.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCC---------------ce--ecCCC
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGV---------------TD--FVNTS  209 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~---------------~~--vv~~~  209 (341)
                      +.....+.+|++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++...               ..  ++..+
T Consensus        97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d  175 (336)
T 2b25_A           97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  175 (336)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence            34556789999999999876 7888888888764 499999999988877765211               11  11111


Q ss_pred             CCChhHHHHHHHHhcCCccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEcc
Q 019414          210 EHDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       210 ~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+  .   ...+..+.||+|+-....+ ..++.+.+.|+|+ |+++.+..
T Consensus       176 ~~~--~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          176 ISG--A---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             TTC--C---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             hHH--c---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            111  0   0111223699988543333 4588999999998 99987753

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.89  E-value=5.2e-06  Score=65.27  Aligned_cols=106  Identities=15%  Similarity=0.213  Sum_probs=71.7

Q ss_pred             chhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHH
Q 019414          141 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVI  219 (341)
Q Consensus       141 ~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i  219 (341)
                      +++++.++ +......+.+|+|+|+|.+|.+.++.++..|+ .|+++++++++.+. +++++.+.. ...+    +.+.+
T Consensus         6 ~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~~-~~~~----~~~~~   78 (144)
T 3oj0_A            6 VSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEYV-LIND----IDSLI   78 (144)
T ss_dssp             CSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEEE-ECSC----HHHHH
T ss_pred             ccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCceE-eecC----HHHHh
Confidence            45555553 33333448999999999999999998888898 59999999888654 667775432 2222    43333


Q ss_pred             HHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          220 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      .     +.|+|+.|++.+..+... ..+.++ ..++.++..
T Consensus        79 ~-----~~Divi~at~~~~~~~~~-~~l~~g-~~vid~~~p  112 (144)
T 3oj0_A           79 K-----NNDVIITATSSKTPIVEE-RSLMPG-KLFIDLGNP  112 (144)
T ss_dssp             H-----TCSEEEECSCCSSCSBCG-GGCCTT-CEEEECCSS
T ss_pred             c-----CCCEEEEeCCCCCcEeeH-HHcCCC-CEEEEccCC
Confidence            2     489999999875332222 566776 777777653

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.87  E-value=7e-05  Score=68.08  Aligned_cols=102  Identities=20%  Similarity=0.211  Sum_probs=73.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceec-CCC-----CCC----hh----HHHHHHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTS-----EHD----RP----IQEVIAE  221 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv-~~~-----~~~----~~----~~~~i~~  221 (341)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++.+++.++.+.++++|++.+. +.+     ...    .+    -.+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 899999999999999999986432 100     000    00    0112222


Q ss_pred             HhcCCccEEEeccCCh-----H-HHHHHHHHhcCCCcEEEEEccC
Q 019414          222 MTNGGVDRSVECTGNI-----D-NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       222 ~~~~~~d~vld~~g~~-----~-~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      .. ...|+||.++..+     . ..+..++.++++ +.++.++..
T Consensus       262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d  304 (381)
T 3p2y_A          262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGE  304 (381)
T ss_dssp             HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGG
T ss_pred             HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCC
Confidence            22 3699999986322     1 236788899997 999999754

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.87  E-value=7.1e-05  Score=64.48  Aligned_cols=104  Identities=21%  Similarity=0.194  Sum_probs=72.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      +.....++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++.    |....+.....+  +.+   ..
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~---~~  158 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD--IYE---GI  158 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC--GGG---CC
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc--hhh---cc
Confidence            45567889999999999876 888889998853 44999999999888877653    543211111222  111   12


Q ss_pred             hcCCccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEc
Q 019414          223 TNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       223 ~~~~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ..+.+|+|+-....+ ..++.+.+.|+++ |+++.+.
T Consensus       159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  194 (255)
T 3mb5_A          159 EEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT  194 (255)
T ss_dssp             CCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            223699998665543 4799999999998 9998875

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.74  E-value=4.3e-05  Score=65.91  Aligned_cols=105  Identities=14%  Similarity=0.071  Sum_probs=73.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHc-----CCceecCCCCCChhHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAE  221 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~-----g~~~vv~~~~~~~~~~~~i~~  221 (341)
                      +.....+.++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++.     |.+.+- ....+  +.+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~-~~~~d--~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVR-FHLGK--LEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEE-EEESC--GGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEE-EEECc--hhhc--C
Confidence            34566789999999999885 888889999864 34999999999988887764     533221 11111  1100  0


Q ss_pred             HhcCCccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEcc
Q 019414          222 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       222 ~~~~~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +..+.+|+|+-....+ ..++.+.+.|+++ |+++.+..
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  199 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP  199 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            1223799998655554 6789999999998 99988763

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.70  E-value=0.00019  Score=65.94  Aligned_cols=94  Identities=22%  Similarity=0.295  Sum_probs=73.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .-.|.+++|+|.|.+|...++.++.+|+ +|+++++++.+...+...|... .     +  +.+.+     ...|+++.|
T Consensus       217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-----~--Leeal-----~~ADIVi~a  282 (435)
T 3gvp_A          217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-V-----K--LNEVI-----RQVDIVITC  282 (435)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-----C--HHHHT-----TTCSEEEEC
T ss_pred             eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-----c--HHHHH-----hcCCEEEEC
Confidence            4589999999999999999999999999 8999999888776666677532 1     1  33222     258999999


Q ss_pred             cCChHHHH-HHHHHhcCCCcEEEEEccCCC
Q 019414          234 TGNIDNMI-SAFECVHDGWGVAVLVGVPSK  262 (341)
Q Consensus       234 ~g~~~~~~-~~~~~l~~~~g~~v~~g~~~~  262 (341)
                      .|....+. +.++.++++ +.++.++-...
T Consensus       283 tgt~~lI~~e~l~~MK~g-ailINvgrg~~  311 (435)
T 3gvp_A          283 TGNKNVVTREHLDRMKNS-CIVCNMGHSNT  311 (435)
T ss_dssp             SSCSCSBCHHHHHHSCTT-EEEEECSSTTT
T ss_pred             CCCcccCCHHHHHhcCCC-cEEEEecCCCc
Confidence            88766665 788999997 98888875543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.70  E-value=0.00035  Score=56.91  Aligned_cols=87  Identities=15%  Similarity=0.278  Sum_probs=63.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceec-CCCCCChhHHHHHHHH-hcCCccEEEec
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEM-TNGGVDRSVEC  233 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~i~~~-~~~~~d~vld~  233 (341)
                      +++|+|+|.|.+|..+++.++.. |. .|+++++++++.+.+++.|...+. |..+.     +.+.+. .-.++|++|.+
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~~-----~~l~~~~~~~~ad~vi~~  112 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATDP-----DFWERILDTGHVKLVLLA  112 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTCH-----HHHHTBCSCCCCCEEEEC
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCCH-----HHHHhccCCCCCCEEEEe
Confidence            66899999999999999999988 98 899999999999988888876443 33221     223333 12379999999


Q ss_pred             cCChHHHHHHHHHhcC
Q 019414          234 TGNIDNMISAFECVHD  249 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~  249 (341)
                      +++......+...++.
T Consensus       113 ~~~~~~~~~~~~~~~~  128 (183)
T 3c85_A          113 MPHHQGNQTALEQLQR  128 (183)
T ss_dssp             CSSHHHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHH
Confidence            9876544444444433

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.65  E-value=0.00073  Score=52.49  Aligned_cols=95  Identities=13%  Similarity=0.133  Sum_probs=66.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      .++|+|+|.|.+|...++.++..|. .|+++++++++.+.+++.|...+. .+..+   .+.+++..-..+|.++-+++.
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~---~~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAAN---EEIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTS---HHHHHHTTGGGCSEEEECCSC
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCC---HHHHHhcCcccCCEEEEECCC
Confidence            4689999999999999999999999 999999999999999988886543 22222   122333222368999999987


Q ss_pred             hHHH---HHHHHHhcCCCcEEEEE
Q 019414          237 IDNM---ISAFECVHDGWGVAVLV  257 (341)
Q Consensus       237 ~~~~---~~~~~~l~~~~g~~v~~  257 (341)
                      ....   ....+.+.+. .+++..
T Consensus        82 ~~~n~~~~~~a~~~~~~-~~iiar  104 (140)
T 3fwz_A           82 GYEAGEIVASARAKNPD-IEIIAR  104 (140)
T ss_dssp             HHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             hHHHHHHHHHHHHHCCC-CeEEEE
Confidence            5432   2344455555 554443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.65  E-value=0.00018  Score=63.52  Aligned_cols=95  Identities=20%  Similarity=0.289  Sum_probs=71.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -+|.+|+|+|.|.+|+++++.++.+|. +|++.+++.++.+.++++|+..+ +..+    +.+.+     ...|+|+.++
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-~~~~----l~~~l-----~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPF-HISK----AAQEL-----RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEE-EGGG----HHHHT-----TTCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-Chhh----HHHHh-----cCCCEEEECC
Confidence            468999999999999999999999999 99999999888777777887532 1111    22221     3589999998


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +....-+..++.++++ +.++.++...
T Consensus       222 p~~~i~~~~l~~mk~~-~~lin~ar~~  247 (293)
T 3d4o_A          222 PALVVTANVLAEMPSH-TFVIDLASKP  247 (293)
T ss_dssp             SSCCBCHHHHHHSCTT-CEEEECSSTT
T ss_pred             ChHHhCHHHHHhcCCC-CEEEEecCCC
Confidence            6522224567788887 8998887543

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.63  E-value=0.00014  Score=63.62  Aligned_cols=105  Identities=21%  Similarity=0.281  Sum_probs=72.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHc-----C--CceecCCCCCChhHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF-----G--VTDFVNTSEHDRPIQEVI  219 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~-----g--~~~vv~~~~~~~~~~~~i  219 (341)
                      +.....+.++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++.     |  .+.+ .....+  +.+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v-~~~~~d--~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNW-RLVVSD--LADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTE-EEECSC--GGGC-
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcE-EEEECc--hHhc-
Confidence            4556788999999999988 6888889998753 34999999999988877653     4  2221 111111  1110 


Q ss_pred             HHHhcCCccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEcc
Q 019414          220 AEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                       ...++.+|+|+-....+ ..++.+.+.|+++ |+++.+..
T Consensus       166 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          166 -ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             -CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence             01123799998655544 6789999999998 99888753

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.48  E-value=0.0003  Score=62.28  Aligned_cols=95  Identities=21%  Similarity=0.283  Sum_probs=70.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -+|.+|+|+|.|.+|.++++.++.+|. +|++.+++.++.+.++++|+.. ++..+    +.+    .. ...|+|+.++
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~~~----l~~----~l-~~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVP-FHTDE----LKE----HV-KDIDICINTI  223 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEGGG----HHH----HS-TTCSEEEECC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Echhh----HHH----Hh-hCCCEEEECC
Confidence            468899999999999999999999999 9999999998877777777642 21111    222    21 3589999998


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +..-.-+..++.++++ +.++.++...
T Consensus       224 p~~~i~~~~~~~mk~g-~~lin~a~g~  249 (300)
T 2rir_A          224 PSMILNQTVLSSMTPK-TLILDLASRP  249 (300)
T ss_dssp             SSCCBCHHHHTTSCTT-CEEEECSSTT
T ss_pred             ChhhhCHHHHHhCCCC-CEEEEEeCCC
Confidence            7532224566778887 8898888643

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.47  E-value=0.00073  Score=62.31  Aligned_cols=93  Identities=25%  Similarity=0.239  Sum_probs=71.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .-.|.+++|+|.|.+|...++.++.+|+ +|+++++++.+...+...|... ++       +.+.+     ...|+++.+
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v~-------LeElL-----~~ADIVv~a  309 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-VT-------LDDAA-----STADIVVTT  309 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-CC-------HHHHG-----GGCSEEEEC
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-cc-------HHHHH-----hhCCEEEEC
Confidence            4578999999999999999999999999 9999998887765565666642 21       33222     148999999


Q ss_pred             cCChHHH-HHHHHHhcCCCcEEEEEccCC
Q 019414          234 TGNIDNM-ISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       234 ~g~~~~~-~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      .+....+ ...+..++++ +.++.+|-..
T Consensus       310 tgt~~lI~~e~l~~MK~G-AILINvGRgd  337 (464)
T 3n58_A          310 TGNKDVITIDHMRKMKDM-CIVGNIGHFD  337 (464)
T ss_dssp             CSSSSSBCHHHHHHSCTT-EEEEECSSST
T ss_pred             CCCccccCHHHHhcCCCC-eEEEEcCCCC
Confidence            8875554 5788899997 8888887543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.47  E-value=0.0003  Score=65.87  Aligned_cols=91  Identities=23%  Similarity=0.286  Sum_probs=70.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -.|.+++|+|+|++|.+.++.++..|+ +|+++++++.+.+.+...+++ +.+..+            ....+|+++++.
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~lee------------~~~~aDvVi~at  328 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLED------------VVSEADIFVTTT  328 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGGG------------TTTTCSEEEECS
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHHH------------HHHhcCEEEeCC
Confidence            478999999999999999999999999 999999999888777777763 221111            012589999999


Q ss_pred             CChHHHH-HHHHHhcCCCcEEEEEccC
Q 019414          235 GNIDNMI-SAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       235 g~~~~~~-~~~~~l~~~~g~~v~~g~~  260 (341)
                      |....+. ..++.++++ +.++..|..
T Consensus       329 G~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          329 GNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             SCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             CChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            8766554 478888887 888888754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.44  E-value=0.0013  Score=51.03  Aligned_cols=77  Identities=18%  Similarity=0.290  Sum_probs=57.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      ..+|+|+|+|.+|...++.+...|+ .|+++++++++.+.+++.+...+. .+..+   .+.+++..-.++|+++.++++
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~~~---~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADPTD---ESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCTTC---HHHHHHSCCTTCSEEEECCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCCCC---HHHHHhCCcccCCEEEEecCC
Confidence            4579999999999999999999999 899999999999988887765432 22222   122333322379999999986


Q ss_pred             hH
Q 019414          237 ID  238 (341)
Q Consensus       237 ~~  238 (341)
                      .+
T Consensus        81 ~~   82 (141)
T 3llv_A           81 DE   82 (141)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.25  E-value=0.0017  Score=53.10  Aligned_cols=100  Identities=19%  Similarity=0.148  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC---------CEEEEEcCChhhHHHHHHcCCceec-CCCCCChhHHHHHHHH
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGA---------SRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEM  222 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~---------~~vv~v~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~i~~~  222 (341)
                      .++++++||.+|+|. |..+..+++..|.         .+|++++.++.+..    -++ ..+ ..+-.+..+.+.+.+.
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~----~~~-~~~~~~d~~~~~~~~~~~~~   92 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPL----EGA-TFLCPADVTDPRTSQRILEV   92 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCC----TTC-EEECSCCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhcccC----CCC-eEEEeccCCCHHHHHHHHHh
Confidence            468899999999987 8899999999874         48999998875310    112 122 1211222234444444


Q ss_pred             hcC-CccEEE-----eccCCh------------HHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 TNG-GVDRSV-----ECTGNI------------DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~~~-~~d~vl-----d~~g~~------------~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .++ .||+|+     ++++..            ..++.+.+.|+|+ |++++...
T Consensus        93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            444 899998     333321            4577889999998 99988744

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.22  E-value=0.00078  Score=56.00  Aligned_cols=100  Identities=22%  Similarity=0.263  Sum_probs=69.8

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-e--ecCCCCCChhHHHHHHH
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FVNTSEHDRPIQEVIAE  221 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~--vv~~~~~~~~~~~~i~~  221 (341)
                      .....+.++++||-+|+|. |..++.+++. +. +|++++.+++..+.+++    +|.+ .  ++..+     +.+.+. 
T Consensus        48 l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d-----~~~~~~-  118 (204)
T 3njr_A           48 LAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGT-----APAALA-  118 (204)
T ss_dssp             HHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC-----TTGGGT-
T ss_pred             HHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCc-----hhhhcc-
Confidence            4556788999999999875 8888888887 76 99999999998877664    4544 2  22111     111010 


Q ss_pred             HhcCCccEEEeccCC-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          222 MTNGGVDRSVECTGN-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       222 ~~~~~~d~vld~~g~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                       ....+|+|+...+. .+.++.+.+.|+|+ |+++....
T Consensus       119 -~~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  155 (204)
T 3njr_A          119 -DLPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV  155 (204)
T ss_dssp             -TSCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred             -cCCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence             11369999865432 23788999999998 99988764

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.21  E-value=0.00077  Score=52.15  Aligned_cols=75  Identities=15%  Similarity=0.302  Sum_probs=53.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceec-CCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +.+|+|+|+|.+|...++.++..|. .|+++++++++.+.+++.+...+. +..  +   .+.+.+..-+++|+++.+++
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~d~~--~---~~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANAT--E---ENELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEECCTT--C---HHHHHTTTGGGCSEEEECCC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEEeCCC--C---HHHHHhcCCCCCCEEEECCC
Confidence            4679999999999999999999998 788898988887766666654332 222  2   12233321236999999998


Q ss_pred             Ch
Q 019414          236 NI  237 (341)
Q Consensus       236 ~~  237 (341)
                      .+
T Consensus        80 ~~   81 (144)
T 2hmt_A           80 AN   81 (144)
T ss_dssp             SC
T ss_pred             Cc
Confidence            64

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.16  E-value=0.00026  Score=58.72  Aligned_cols=133  Identities=17%  Similarity=0.232  Sum_probs=77.0

Q ss_pred             cccceEE-eecCceEECCCCCCchhhhhccccchhhhhhhhhhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEE
Q 019414          110 TFSEYTV-VHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA--KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIG  186 (341)
Q Consensus       110 ~~ae~~~-v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~--~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~  186 (341)
                      .|.+|.. .+....+.+++++++.....     .+.. .+....  .++++++||-+|+|. |..+..+++ .+...|++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-----~~~~-~~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-----QTTQ-LAMLGIERAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-----HHHH-HHHHHHHHHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-----ccHH-HHHHHHHHhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEE
Confidence            5667766 66777788888776554321     1111 111222  257889999999865 666777666 46569999


Q ss_pred             EcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh---HHHHHHHHHhcCCCcEEEEEc
Q 019414          187 VDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       187 v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ++.+++..+.+++    .+... +.....+  +.    +..++.+|+|+-.....   ..++.+.+.|+++ |++++..
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d--~~----~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  159 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYD-IALQKTS--LL----ADVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIFSG  159 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCC-CEEEESS--TT----TTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCc-eEEEecc--cc----ccCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            9999988877765    34332 1111111  11    11234799998654321   2355566778897 9888764

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.08  E-value=0.0058  Score=50.37  Aligned_cols=103  Identities=17%  Similarity=0.174  Sum_probs=71.8

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce--ecCCCCCChhHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAE  221 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~i~~  221 (341)
                      +....+++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++    .+.+.  ++..+..+     .+. 
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-----~~~-  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE-----GLD-  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT-----TCT-
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh-----hhh-
Confidence            34566888999999999874 8888899988754599999999998887765    34332  22111111     000 


Q ss_pred             HhcCCccEEEeccC---ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          222 MTNGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       222 ~~~~~~d~vld~~g---~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                       ..+.+|+|+....   ....++.+.+.|+++ |+++....
T Consensus       105 -~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          105 -DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             -TSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             -cCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence             1136999987643   245788999999998 99998754

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.05  E-value=0.0021  Score=51.53  Aligned_cols=102  Identities=19%  Similarity=0.202  Sum_probs=71.5

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-eecCCCCCChhHHHHHHHHh
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~i~~~~  223 (341)
                      .....+.++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++    .+.+ .++ ... +  ..+   .+.
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~~-d--~~~---~~~   89 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIA-VQQ-G--APR---AFD   89 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEE-EEC-C--TTG---GGG
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEE-Eec-c--hHh---hhh
Confidence            4556788999999999875 8888899988744499999999988887765    3544 231 111 1  111   122


Q ss_pred             c--CCccEEEeccCC--hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 N--GGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~--~~~d~vld~~g~--~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .  +.+|+|+.....  ...++.+.+.|+++ |+++....
T Consensus        90 ~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           90 DVPDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             GCCSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             ccCCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence            2  579999965432  34789999999998 99987754

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.05  E-value=0.0005  Score=58.43  Aligned_cols=101  Identities=21%  Similarity=0.212  Sum_probs=70.2

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .+...+.++++||.+|+| .|..+..+++..+ .+|++++.+++..+.+++    .|...+ .....+  ..   .....
T Consensus        84 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~---~~~~~  155 (235)
T 1jg1_A           84 LEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNV-HVILGD--GS---KGFPP  155 (235)
T ss_dssp             HHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESC--GG---GCCGG
T ss_pred             HHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEECC--cc---cCCCC
Confidence            455678899999999988 6888999999887 499999999988777665    444321 111111  10   11122


Q ss_pred             C-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      + +||+|+....-....+.+.+.|+++ |++++.-
T Consensus       156 ~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~  189 (235)
T 1jg1_A          156 KAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPV  189 (235)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             CCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEE
Confidence            3 5999997665444567888999998 8887654

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.02  E-value=0.0014  Score=55.70  Aligned_cols=103  Identities=14%  Similarity=0.098  Sum_probs=70.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh---
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT---  223 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~---  223 (341)
                      ....++.+||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+....   
T Consensus        56 ~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGS--ALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC--HHHHHHHHHhhc
Confidence            345678899999987 4888889999874 3499999999988877665    3543212222222  333333321   


Q ss_pred             -----------c-CCccEEEeccCCh---HHHHHHHHHhcCCCcEEEEEc
Q 019414          224 -----------N-GGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 -----------~-~~~d~vld~~g~~---~~~~~~~~~l~~~~g~~v~~g  258 (341)
                                 + +.||+|+......   ..++.+.+.|+++ |+++...
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence                       2 5799998665433   4568889999998 9998754

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.00  E-value=0.00068  Score=57.42  Aligned_cols=103  Identities=17%  Similarity=0.178  Sum_probs=68.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHh-cCC
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT-NGG  226 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~-~~~  226 (341)
                      ....++++||-+|+| .|..++.+++..+..+|++++.+++..+.+++.    |...-+.....+  +.+.+.... ++.
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  126 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD--ALQLGEKLELYPL  126 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC--GGGSHHHHTTSCC
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC--HHHHHHhcccCCC
Confidence            345678899999987 688888999987434999999999988877653    542111111112  221122222 347


Q ss_pred             ccEEEeccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          227 VDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       227 ~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ||+|+.....   ...++.+.+.|+++ |+++...
T Consensus       127 fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  160 (233)
T 2gpy_A          127 FDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN  160 (233)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            9999865432   35678888999998 9998864

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.99  E-value=0.0024  Score=56.72  Aligned_cols=104  Identities=16%  Similarity=0.192  Sum_probs=72.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHh
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.....+.++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |...-+.....+  +    .+. 
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~~-  152 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W----EDF-  152 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G----GGC-
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--h----HHC-
Confidence            45566788999999999876 8888889988788 999999999998887763    332111111111  1    111 


Q ss_pred             cCCccEEEec-----cCC---hHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          224 NGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       224 ~~~~d~vld~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      ++.||+|+..     .+.   ...++.+.+.|+|+ |++++.....
T Consensus       153 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~  197 (318)
T 2fk8_A          153 AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSVS  197 (318)
T ss_dssp             CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEEC
T ss_pred             CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEecc
Confidence            2579999865     321   34678889999998 9998876543

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.90  E-value=0.00085  Score=55.95  Aligned_cols=104  Identities=19%  Similarity=0.185  Sum_probs=70.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      +.....+.++++||.+|+| .|..+..+++..|. .+|++++.+++..+.+++.    +.+.+ .....+  ...   ..
T Consensus        69 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~~---~~  141 (215)
T 2yxe_A           69 MCELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNV-IVIVGD--GTL---GY  141 (215)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTE-EEEESC--GGG---CC
T ss_pred             HHHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEECC--ccc---CC
Confidence            3455678899999999987 48888999998862 3999999999888777653    43321 111111  100   11


Q ss_pred             h-cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 T-NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~-~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      . .+.||+|+.........+.+.+.|+++ |++++.-.
T Consensus       142 ~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  178 (215)
T 2yxe_A          142 EPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPVG  178 (215)
T ss_dssp             GGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             CCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEEC
Confidence            1 247999997765444557888999998 98877643

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.90  E-value=0.0081  Score=50.68  Aligned_cols=72  Identities=19%  Similarity=0.226  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC-cee-cCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~-~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+.++ ..+ .|.. .      .+.+.. +++|+||+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~------~~~~~~-~~~D~vi~   90 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-E------DFSHAF-ASIDAVVF   90 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-S------CCGGGG-TTCSEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-H------HHHHHH-cCCCEEEE
Confidence            3678999997 9999999999988998 99999999999888777776 433 2332 1      122222 36999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus        91 ~ag~   94 (236)
T 3e8x_A           91 AAGS   94 (236)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9874

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.88  E-value=0.014  Score=44.51  Aligned_cols=75  Identities=17%  Similarity=0.265  Sum_probs=52.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceec-CCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv-~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      -+|+|+|+|.+|...++.+...|. .|+++++++++.+.+++ ++...+. +..  +  . +.+.+..-.++|+|+.+++
T Consensus         5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~d~~--~--~-~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVINGDCT--K--I-KTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEESCTT--S--H-HHHHHTTTTTCSEEEECCS
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEcCCC--C--H-HHHHHcCcccCCEEEEeeC
Confidence            479999999999999998888898 89999999888776654 5654332 222  1  1 1222222236999999998


Q ss_pred             ChH
Q 019414          236 NID  238 (341)
Q Consensus       236 ~~~  238 (341)
                      ...
T Consensus        79 ~~~   81 (140)
T 1lss_A           79 KEE   81 (140)
T ss_dssp             CHH
T ss_pred             Cch
Confidence            754

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.85  E-value=0.0019  Score=59.57  Aligned_cols=89  Identities=25%  Similarity=0.317  Sum_probs=68.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -.|.+|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|...+      +  +.+.+     ...|+++.+.
T Consensus       209 L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~------s--L~eal-----~~ADVVilt~  274 (436)
T 3h9u_A          209 IAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL------L--VEDVV-----EEAHIFVTTT  274 (436)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC------C--HHHHT-----TTCSEEEECS
T ss_pred             ccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec------C--HHHHH-----hhCCEEEECC
Confidence            468999999999999999999999999 89999999888777777776422      1  33332     2489999888


Q ss_pred             CChHHHH-HHHHHhcCCCcEEEEEc
Q 019414          235 GNIDNMI-SAFECVHDGWGVAVLVG  258 (341)
Q Consensus       235 g~~~~~~-~~~~~l~~~~g~~v~~g  258 (341)
                      +....+. ..++.++++ +.++.++
T Consensus       275 gt~~iI~~e~l~~MK~g-AIVINvg  298 (436)
T 3h9u_A          275 GNDDIITSEHFPRMRDD-AIVCNIG  298 (436)
T ss_dssp             SCSCSBCTTTGGGCCTT-EEEEECS
T ss_pred             CCcCccCHHHHhhcCCC-cEEEEeC
Confidence            7644444 567778887 8888777

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.82  E-value=0.002  Score=55.27  Aligned_cols=103  Identities=14%  Similarity=0.150  Sum_probs=68.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc-CC
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN-GG  226 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~-~~  226 (341)
                      ...++.+||-+|+|. |..++.+|+..+ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..... +.
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~l~~~~~~~~  136 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP--ALQSLESLGECPA  136 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHTCCSCCC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHhcCCCCC
Confidence            456788999999864 778888888774 3499999999998877665    3543211122222  4443433332 27


Q ss_pred             ccEEE-ecc--CChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          227 VDRSV-ECT--GNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       227 ~d~vl-d~~--g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ||+|+ |+.  .....++.+.+.|+|+ |.++.-..
T Consensus       137 fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          137 FDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             eEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            99998 332  1234688889999998 98887653

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.81  E-value=0.011  Score=49.63  Aligned_cols=105  Identities=15%  Similarity=0.127  Sum_probs=68.8

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCc-eecCCCCCChhHHHHHHHHh
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~i~~~~  223 (341)
                      ...+.+++.+||=+|+|. |..++.+|+.++ -.+|++++.+++..+.+++    .|.. .-+.....+  ..+.+..+.
T Consensus        50 ~~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd--a~~~l~~~~  126 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPAA-GLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR--PLDVMSRLA  126 (221)
T ss_dssp             HHSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC--HHHHGGGSC
T ss_pred             HhhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC--HHHHHHHhc
Confidence            344555677999889874 888889999763 2399999999998777654    4543 112222222  333332332


Q ss_pred             cCCccEEEeccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          224 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 ~~~~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ++.||+||-....   ...++.+++.|+|+ |.++.-+
T Consensus       127 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn  163 (221)
T 3dr5_A          127 NDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLAD  163 (221)
T ss_dssp             TTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETT
T ss_pred             CCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeC
Confidence            4589999743222   24678899999997 9888754

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.81  E-value=0.001  Score=55.26  Aligned_cols=101  Identities=17%  Similarity=0.158  Sum_probs=68.0

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .....++++++||-+|+| .|..+..+++. +. +|++++.+++..+.+++    .+...+ .....+  ..+..  ...
T Consensus        70 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~~~~--~~~  141 (210)
T 3lbf_A           70 TELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNV-STRHGD--GWQGW--QAR  141 (210)
T ss_dssp             HHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESC--GGGCC--GGG
T ss_pred             HHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCce-EEEECC--cccCC--ccC
Confidence            455678899999999987 47788888887 65 99999999998887765    343321 111111  11100  012


Q ss_pred             CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.||+|+....-....+.+.+.|+++ |+++..-
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~  174 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV  174 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred             CCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence            47999997654434456788999998 9887764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=96.80  E-value=0.011  Score=50.97  Aligned_cols=78  Identities=17%  Similarity=0.284  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CH--HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCC---c-eecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV---T-DFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~--~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~---~-~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .+.++||+|+ |.  +|.+.++.+...|+ +|+.++++++..+.+++    .+.   . ...|..+.+ .+.+.+.+...
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDA-EIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSH-HHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHH-HHHHHHHHHHH
Confidence            4678999986 55  99999888888999 88888888755444433    332   1 123444332 23333333222


Q ss_pred             --CCccEEEeccC
Q 019414          225 --GGVDRSVECTG  235 (341)
Q Consensus       225 --~~~d~vld~~g  235 (341)
                        +++|+++++.|
T Consensus        84 ~~g~id~li~~Ag   96 (266)
T 3oig_A           84 QVGVIHGIAHCIA   96 (266)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HhCCeeEEEEccc
Confidence              36999999876

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.79  E-value=0.0044  Score=54.59  Aligned_cols=104  Identities=17%  Similarity=0.206  Sum_probs=73.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHh
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.....++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |...-+.....+  +    .++ 
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~~-  134 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG--W----EEF-  134 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC--G----GGC-
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--H----HHc-
Confidence            45667889999999999875 8888899998886 999999999988877653    432111111112  1    112 


Q ss_pred             cCCccEEEeccC-----C----------hHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          224 NGGVDRSVECTG-----N----------IDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       224 ~~~~d~vld~~g-----~----------~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      ++.||+|+-...     .          ...++.+.+.|+|+ |++++.....
T Consensus       135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~  186 (302)
T 3hem_A          135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTITI  186 (302)
T ss_dssp             CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEEC
T ss_pred             CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEec
Confidence            458999985321     1          25678899999998 9998876543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.77  E-value=0.013  Score=48.76  Aligned_cols=91  Identities=21%  Similarity=0.241  Sum_probs=62.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|||+|+ |.+|...+..+...|+ +|+++.+++++.+.+...++..+ .|..+.+  .    ..+  +++|+||++.|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~--~----~~~--~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLVLT--E----ADL--DSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGGCC--H----HHH--TTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccccc--H----hhc--ccCCEEEECCcc
Confidence            5899997 9999999999988998 99999999888766544444432 3444443  2    111  369999999875


Q ss_pred             h----------HHHHHHHHHhcCCCcEEEEEc
Q 019414          237 I----------DNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       237 ~----------~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .          .....+++.+...+++++.++
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S  104 (224)
T 3h2s_A           73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL  104 (224)
T ss_dssp             CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence            2          123445555554437888885

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.73  E-value=0.018  Score=49.01  Aligned_cols=78  Identities=24%  Similarity=0.314  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCcee---cCCCCCCh--hHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHDR--PIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v---v~~~~~~~--~~~~~i~~~~~~~~d  228 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++....   .|..+.+.  .+.+.+.+.. +++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT-GGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            4678999987 9999999999999999 899999998876653 44554322   23322210  1222222222 3799


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      +++++.|
T Consensus        83 ~lv~nAg   89 (247)
T 3rwb_A           83 ILVNNAS   89 (247)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.73  E-value=0.0057  Score=55.11  Aligned_cols=49  Identities=39%  Similarity=0.447  Sum_probs=42.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  204 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~  204 (341)
                      -+|.+|.|.|.|.+|+.+++.++.+|+ +|++.+.+.++.+..++++++.
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~  221 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTA  221 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEE
Confidence            478999999999999999999999999 8889988877766777787653

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.72  E-value=0.016  Score=47.99  Aligned_cols=91  Identities=12%  Similarity=0.225  Sum_probs=61.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .++..+ .|..+.+  . +   .+  +++|+||++.|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~--~-~---~~--~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFDLT--L-S---DL--SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGGCC--H-H---HH--TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccChh--h-h---hh--cCCCEEEECCcC
Confidence            5899997 9999999999999998 8999999988776554 344322 3444433  2 1   11  369999999875


Q ss_pred             h--------HHHHHHHHHhcCC-CcEEEEEcc
Q 019414          237 I--------DNMISAFECVHDG-WGVAVLVGV  259 (341)
Q Consensus       237 ~--------~~~~~~~~~l~~~-~g~~v~~g~  259 (341)
                      .        .....+++.+... .++++.++.
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS  103 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG  103 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence            3        2234555566543 268887764

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.71  E-value=0.0035  Score=52.70  Aligned_cols=103  Identities=14%  Similarity=0.138  Sum_probs=69.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc--
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+..++.+||-+|+| .|..++.+++..+ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+..  
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~~~~~~~~~  141 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP--ALETLDELLAAG  141 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTT
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcC--HHHHHHHHHhcC
Confidence            345678899999987 6888888998763 3499999999988877765    3442111122222  4344333332  


Q ss_pred             --CCccEEEeccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 --GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 --~~~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                        +.||+|+-....   ...++.+.+.|+++ |.++...
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~  179 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR  179 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEC
Confidence              579998743322   24688899999998 9988865

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.71  E-value=0.013  Score=49.53  Aligned_cols=74  Identities=23%  Similarity=0.390  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc-CCcee-cCCCCCChhHHHHHHHHhc--CCccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-GVTDF-VNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~-g~~~v-v~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      ++.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++ +...+ .|..+.     +.+.+...  +++|+
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~~~id~   79 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-----EATERALGSVGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-----HHHHHHHTTCCCCCE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH-----HHHHHHHHHcCCCCE
Confidence            4678999987 9999999999988999 8999989887766443 33 23222 233221     12233222  36999


Q ss_pred             EEeccC
Q 019414          230 SVECTG  235 (341)
Q Consensus       230 vld~~g  235 (341)
                      +|++.|
T Consensus        80 vi~~Ag   85 (244)
T 3d3w_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999887

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.69  E-value=0.0092  Score=50.82  Aligned_cols=77  Identities=23%  Similarity=0.350  Sum_probs=51.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++++.. ..|..+.+ .+.+.+.+...  +++|++|
T Consensus         5 ~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            5 DKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADPA-SVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCHH-HHHHHHHHHHHHHSSCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            578999987 9999999998888999 8999989888766543 345432 23443322 12222222211  3699999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      ++.|
T Consensus        83 n~Ag   86 (245)
T 1uls_A           83 HYAG   86 (245)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.69  E-value=0.0088  Score=51.21  Aligned_cols=102  Identities=16%  Similarity=0.111  Sum_probs=71.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc----eecCCCCCChhHHHHHHHHh
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.....++++.+||-+|+| .|..+..+++..+. +|++++.+++..+.+++....    .++..+..+  .     ...
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~--~-----~~~  117 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILT--K-----EFP  117 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT--C-----CCC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc--C-----CCC
Confidence            3455678899999999987 58888888887787 999999999999999886432    111111111  0     112


Q ss_pred             cCCccEEEeccC--------ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 NGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~~~~d~vld~~g--------~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ++.||+|+-...        -...+..+.+.|+|+ |++++...
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            347999986422        123578889999998 99988764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.67  E-value=0.014  Score=49.91  Aligned_cols=79  Identities=22%  Similarity=0.236  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-e--cCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+.+ .+.+.+.+...  +++|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEA-DWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHH-HHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence            3568999987 9999999998888999 899999988776543 3444322 1  2333221 12222222211  3699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus        83 ~lv~~Ag~   90 (253)
T 1hxh_A           83 VLVNNAGI   90 (253)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.66  E-value=0.024  Score=49.96  Aligned_cols=73  Identities=25%  Similarity=0.276  Sum_probs=53.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      -+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+.. .-+..+.       +     ...|+||-|+..
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~-------~-----~~aDvvi~~vp~   74 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASAREF-------A-----GVVDALVILVVN   74 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTTT-------T-----TTCSEEEECCSS
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHHH-------H-----hcCCEEEEECCC
Confidence            479999999999999998888998 9999999999999988888754 2222211       0     136777777766


Q ss_pred             hHHHHHH
Q 019414          237 IDNMISA  243 (341)
Q Consensus       237 ~~~~~~~  243 (341)
                      +..++..
T Consensus        75 ~~~~~~v   81 (303)
T 3g0o_A           75 AAQVRQV   81 (303)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444444

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.64  E-value=0.0063  Score=54.01  Aligned_cols=91  Identities=15%  Similarity=0.068  Sum_probs=62.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCChhh--HHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEe
Q 019414          158 SSVAVFGLGAVGLAAAEGARI--AGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  232 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~--~g~~~vv~v~~~~~~--~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld  232 (341)
                      -+|.|+|+|.+|...+..+..  -+.+.+.++++++++  .+.++++|.....     +  -.+.+.+.++. ++|+||+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~-----~--~~e~ll~~~~~~~iDvV~~   77 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-----A--GVEGLIKLPEFADIDFVFD   77 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-----S--HHHHHHHSGGGGGEEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc-----C--CHHHHHhccCCCCCcEEEE
Confidence            478999999999988887743  356556666767665  5677788864221     1  23334443333 6999999


Q ss_pred             ccCChHHHHHHHHHhcC--CCcEEEE
Q 019414          233 CTGNIDNMISAFECVHD--GWGVAVL  256 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~--~~g~~v~  256 (341)
                      +++.....+.+..++..  + .+++.
T Consensus        78 atp~~~h~~~a~~al~a~~G-k~Vi~  102 (312)
T 1nvm_B           78 ATSASAHVQNEALLRQAKPG-IRLID  102 (312)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             CCChHHHHHHHHHHHHhCCC-CEEEE
Confidence            99976777888888886  6 66655

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.64  E-value=0.0028  Score=53.66  Aligned_cols=103  Identities=18%  Similarity=0.168  Sum_probs=68.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc---
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  224 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~---  224 (341)
                      +..++.+||-+|+| .|..++.+++..+ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+..   
T Consensus        69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~l~~l~~~~~  145 (232)
T 3cbg_A           69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGP--ALATLEQLTQGKP  145 (232)
T ss_dssp             HHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHHHHHTSSS
T ss_pred             HhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcCC
Confidence            34567899999987 6888889998764 2399999999998877765    3543212222222  4444444432   


Q ss_pred             -CCccEEE-eccC--ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          225 -GGVDRSV-ECTG--NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       225 -~~~d~vl-d~~g--~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                       +.||+|| |+..  ....++.+.+.|+|+ |.++.-..
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  183 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDNV  183 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEECT
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence             5799998 4331  134688899999998 99887643

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.64  E-value=0.013  Score=50.79  Aligned_cols=78  Identities=26%  Similarity=0.413  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCC-ce----ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV-TD----FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~-~~----vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+    ++.+. ..    ..|..+.+ .+.+.+.+... 
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEE-DILSMFSAIRSQ  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence            3678999987 9999999999888999 899998988765543    23332 11    12433322 12222222211 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|++|++.|
T Consensus       109 ~g~iD~vi~~Ag  120 (279)
T 1xg5_A          109 HSGVDICINNAG  120 (279)
T ss_dssp             HCCCSEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             36999999887

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.63  E-value=0.021  Score=52.67  Aligned_cols=96  Identities=13%  Similarity=0.226  Sum_probs=67.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+.+|+|+|.|.+|+..++.++..|. .|++++.++++.+.+++.|...++ -+..+   .+.+++..-..+|+++-+++
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~-GDat~---~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFY-GDATR---MDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEE-SCTTC---HHHHHHTTTTTCSEEEECCS
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEE-cCCCC---HHHHHhcCCCccCEEEECCC
Confidence            34679999999999999999999998 899999999999999998876443 22222   12233332237999999998


Q ss_pred             ChHH---HHHHHHHhcCCCcEEEEE
Q 019414          236 NIDN---MISAFECVHDGWGVAVLV  257 (341)
Q Consensus       236 ~~~~---~~~~~~~l~~~~g~~v~~  257 (341)
                      ..+.   +....+.+.+. .+++.-
T Consensus        78 ~~~~n~~i~~~ar~~~p~-~~Iiar  101 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPH-LQIIAR  101 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             ChHHHHHHHHHHHHhCCC-CeEEEE
Confidence            7543   23344455565 555544

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.62  E-value=0.008  Score=51.42  Aligned_cols=77  Identities=16%  Similarity=0.094  Sum_probs=53.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce---ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      .+|||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.+...   ..|-.+.+ .+.+.+.+...  +++|+++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPL-TLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHH-HHHHHHHHHHHHHSCCCEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            57899986 8999999999999999 9999999998887766554432   23333322 12222222222  3799999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      ++.|.
T Consensus        81 NNAG~   85 (247)
T 3ged_A           81 NNACR   85 (247)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98863

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.61  E-value=0.0079  Score=52.41  Aligned_cols=102  Identities=16%  Similarity=0.146  Sum_probs=70.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHh
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +....++.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |...-+.....+  +    .++.
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~----~~~~  127 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W----EQFD  127 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G----GGCC
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC--h----hhCC
Confidence            34556788999999999875 7788888877788 999999999988877653    321111111111  1    1122


Q ss_pred             cCCccEEEec-----cC---ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 NGGVDRSVEC-----TG---NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~~~~d~vld~-----~g---~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                       +.||+|+..     .+   ....++.+.+.|+|+ |++++...
T Consensus       128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence             579999854     22   134688899999998 99987754

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.58  E-value=0.0022  Score=57.14  Aligned_cols=104  Identities=21%  Similarity=0.199  Sum_probs=69.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++    .|.+.+ .....+  ..+..  .
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~d--~~~~~--~  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCGD--GYYGV--P  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESC--GGGCC--G
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEECC--hhhcc--c
Confidence            34566889999999999876 7888888887652 479999999998887765    354321 111111  11100  0


Q ss_pred             hcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          223 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       223 ~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ..+.||+|+....-....+.+.+.|+|+ |++++.-
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence            1247999987654434446788899998 9888764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.58  E-value=0.017  Score=50.33  Aligned_cols=79  Identities=23%  Similarity=0.231  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HH----HHHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~----~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++ .+    .+++.+...   ..|..+.+ .+.+.+.+...  
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVE-DIVRMFEEAVKIF  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            3678999987 9999999999988999 88888777543 22    234445432   12333321 12222222211  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus       106 g~iD~lv~~Ag~  117 (283)
T 1g0o_A          106 GKLDIVCSNSGV  117 (283)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998873

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=96.57  E-value=0.0078  Score=52.31  Aligned_cols=79  Identities=18%  Similarity=0.289  Sum_probs=55.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .|..+||+|+ +++|.+.++.+...|+ +|+.+++++++.+. ++++|...   ..|..+.+ ++.+.+.+...  +++|
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~-~v~~~~~~~~~~~G~iD  105 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLA-ELDRLYEKVKAEAGRID  105 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHH-HHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            5788899987 8999999999999999 89999999988765 55676543   23433322 12222222222  3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++++..|.
T Consensus       106 iLVNNAG~  113 (273)
T 4fgs_A          106 VLFVNAGG  113 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.57  E-value=0.005  Score=53.08  Aligned_cols=77  Identities=19%  Similarity=0.210  Sum_probs=51.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCcee-cCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++ .+.+++.++..+ .|..+.+ .+.+.+.+...  +++|+++
T Consensus        27 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           27 SAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSCET-GIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTSHH-HHHHHHHHHHHHCSCCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCCHH-HHHHHHHHHHHhcCCCCEEE
Confidence            567999987 9999999998888999 78888887765 444556665332 3443322 12222222221  3799999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      ++.|
T Consensus       105 ~nAg  108 (260)
T 3gem_A          105 HNAS  108 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.57  E-value=0.012  Score=50.52  Aligned_cols=78  Identities=26%  Similarity=0.347  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc-----CCc-e--ecCCCCCChhHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVT-D--FVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~-----g~~-~--vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++     +.. .  ..|..+.+ .+.+.+.+....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPG-DIDRLFEKARDL   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHH-HHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHH-HHHHHHHHHHHh
Confidence            3578999987 9999999998888999 8999989887655432 22     211 1  13443322 133333333322


Q ss_pred             -CccEEEeccC
Q 019414          226 -GVDRSVECTG  235 (341)
Q Consensus       226 -~~d~vld~~g  235 (341)
                       ++|++|++.|
T Consensus        84 ~gid~lv~~Ag   94 (260)
T 2z1n_A           84 GGADILVYSTG   94 (260)
T ss_dssp             TCCSEEEECCC
T ss_pred             cCCCEEEECCC
Confidence             4999999887

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.57  E-value=0.0077  Score=51.32  Aligned_cols=79  Identities=15%  Similarity=0.156  Sum_probs=52.5

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce---ecCCCCCChhHHHHHHHHhcCCcc
Q 019414          154 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       154 ~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~---vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      ..++.+|||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++....   ..|..+.+  ..+.+.+.. +++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~-~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKE--ECSNLISKT-SNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHH--HHHHHHHTC-SCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHH--HHHHHHHhc-CCCC
Confidence            456788999987 9999999998889999 8999999988876543 343322   12332211  222222211 3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus        87 ~li~~Ag~   94 (249)
T 3f9i_A           87 ILVCNAGI   94 (249)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99998873

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.55  E-value=0.001  Score=56.59  Aligned_cols=100  Identities=16%  Similarity=0.179  Sum_probs=67.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee--cCCCCCChhHHHHHHHHhcCCccEE-
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRS-  230 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~i~~~~~~~~d~v-  230 (341)
                      ..+|.+||-+|+| .|..+..+++..+. .|++++.+++-.+.+++.....-  +.....+  +.........+.||.| 
T Consensus        58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~--a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeeh--HHhhcccccccCCceEE
Confidence            4689999999987 37777788876666 89999999999888887433210  0011122  4333334444579988 


Q ss_pred             EeccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          231 VECTGN----------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       231 ld~~g~----------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|+...          ...++++.+.|+|+ |+++.+.
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            465432          23467788999998 9998875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.54  E-value=0.013  Score=50.35  Aligned_cols=78  Identities=19%  Similarity=0.227  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cC--Cce-ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG--VTD-FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g--~~~-vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ +.  +.. ..|..+.+ .+.+.+.+...  +++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~-~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRA-SVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHH-HHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHH-HHHHHHHHHHHHcCCCC
Confidence            3678999987 9999999999888999 89999898877665433 32  211 23433321 12222222211  3699


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus        89 ~lv~~Ag   95 (263)
T 3ak4_A           89 LLCANAG   95 (263)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.54  E-value=0.038  Score=46.64  Aligned_cols=74  Identities=20%  Similarity=0.352  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c-CCcee-cCCCCCChhHHHHHHHHhc--CCccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-GVTDF-VNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~-g~~~v-v~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      ++.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ . +...+ .|..+.     +.+.+...  +++|+
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~~~id~   79 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-----DATEKALGGIGPVDL   79 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-----HHHHHHHTTCCCCSE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCCH-----HHHHHHHHHcCCCCE
Confidence            4578999987 9999999999988999 89999898877655433 3 33222 233321     22333322  36899


Q ss_pred             EEeccC
Q 019414          230 SVECTG  235 (341)
Q Consensus       230 vld~~g  235 (341)
                      +|++.|
T Consensus        80 vi~~Ag   85 (244)
T 1cyd_A           80 LVNNAA   85 (244)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.53  E-value=0.0087  Score=50.68  Aligned_cols=78  Identities=18%  Similarity=0.308  Sum_probs=51.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc---eecCCCCCChhHHHHHHHHhc--CCccE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT---DFVNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~---~vv~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      +.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ ++..   ...|..+.+ .+.+.+.+...  +++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHE-DVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHH-HHHHHHHHHHHHHCSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHH-HHHHHHHHHHHhcCCCcE
Confidence            467999987 9999999988888999 89999999887665433 3321   123333321 12222222211  37999


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      ++++.|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9998874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.53  E-value=0.013  Score=51.29  Aligned_cols=73  Identities=27%  Similarity=0.279  Sum_probs=51.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC-----ce-ecCCCCCChhHHHHHHHHhcCCc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV-----TD-FVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~-----~~-vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      -.+.+++|+|+|++|.+++..+...|+++|+.+.++.++.+. +++++.     .. .++.+  +  +.+.+.     .+
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~--~--l~~~l~-----~~  195 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR--G--IEDVIA-----AA  195 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST--T--HHHHHH-----HS
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH--H--HHHHHh-----cC
Confidence            357899999999999999998888999889999999888664 343331     11 22211  1  443333     38


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+||+|++.
T Consensus       196 DiVInaTp~  204 (283)
T 3jyo_A          196 DGVVNATPM  204 (283)
T ss_dssp             SEEEECSST
T ss_pred             CEEEECCCC
Confidence            999999853

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.51  E-value=0.0054  Score=52.58  Aligned_cols=89  Identities=21%  Similarity=0.268  Sum_probs=56.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh-------------------hhHHHH----HHcCCceecC--CCCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFEEA----KKFGVTDFVN--TSEH  211 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~-------------------~~~~~~----~~~g~~~vv~--~~~~  211 (341)
                      +.+|+|+|+|++|..+++.+...|..+++.++.+.                   .|.+.+    +++.....+.  ...-
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            46899999999999999999999998999999886                   555443    3333221111  1111


Q ss_pred             ChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcC
Q 019414          212 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD  249 (341)
Q Consensus       212 ~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~  249 (341)
                      +.   +.+.+.. .++|+|++|+.+.+.-..+.+.+..
T Consensus       111 ~~---~~~~~~~-~~~DvVi~~~d~~~~~~~l~~~~~~  144 (249)
T 1jw9_B          111 DD---AELAALI-AEHDLVLDCTDNVAVRNQLNAGCFA  144 (249)
T ss_dssp             CH---HHHHHHH-HTSSEEEECCSSHHHHHHHHHHHHH
T ss_pred             CH---hHHHHHH-hCCCEEEEeCCCHHHHHHHHHHHHH
Confidence            11   1222222 2599999999886654444444433

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.51  E-value=0.013  Score=50.03  Aligned_cols=80  Identities=16%  Similarity=0.189  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----c-C--Cc-eecCCCCCChh-HHHHHHHHh--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F-G--VT-DFVNTSEHDRP-IQEVIAEMT--  223 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~-g--~~-~vv~~~~~~~~-~~~~i~~~~--  223 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    . +  +. ...|....+.+ +.+.+.+..  
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            4678999987 9999999998888999 89999999887654322    1 1  11 12343212211 222222221  


Q ss_pred             cCCccEEEeccCC
Q 019414          224 NGGVDRSVECTGN  236 (341)
Q Consensus       224 ~~~~d~vld~~g~  236 (341)
                      .+++|+++++.|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            1379999998873

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.50  E-value=0.013  Score=50.15  Aligned_cols=79  Identities=18%  Similarity=0.265  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----c--C-Cc-e--ecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--G-VT-D--FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~--g-~~-~--vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+    .  + .. .  ..|..+.+ .+.+.+.+...
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~   83 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCT-KADTEIKDIHQ   83 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHH-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHH-HHHHHHHHHHH
Confidence            3678999987 9999999988888899 89999999887654432    1  2 11 1  13443322 12222222221


Q ss_pred             --CCccEEEeccCC
Q 019414          225 --GGVDRSVECTGN  236 (341)
Q Consensus       225 --~~~d~vld~~g~  236 (341)
                        +++|+++++.|.
T Consensus        84 ~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           84 KYGAVDILVNAAAM   97 (250)
T ss_dssp             HHCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence              379999998874

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.49  E-value=0.0034  Score=53.52  Aligned_cols=77  Identities=17%  Similarity=0.202  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+..+.-.+. ...|-.+.+  -.+++.+.. +++|+++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~--~v~~~~~~~-g~iDiLVNN   85 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITDSQ--RLQRLFEAL-PRLDVLVNN   85 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTCHH--HHHHHHHHC-SCCSEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCCHH--HHHHHHHhc-CCCCEEEEC
Confidence            5899999986 8999999999999999 899999988765432211111 123443322  233333322 479999998


Q ss_pred             cCC
Q 019414          234 TGN  236 (341)
Q Consensus       234 ~g~  236 (341)
                      .|-
T Consensus        86 AGi   88 (242)
T 4b79_A           86 AGI   88 (242)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            873

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.49  E-value=0.013  Score=52.04  Aligned_cols=78  Identities=17%  Similarity=0.206  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCC--c---eecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV--T---DFVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~--~---~vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    ..+.  .   ...|..+.+ .+.+.+.+... 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASRE-GFKMAADEVEAR   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHH-HHHHHHHHHHHh
Confidence            4678999987 9999999998888999 8999999988765432    2332  1   123443322 12222322221 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|++|++.|
T Consensus        85 ~g~id~lv~nAg   96 (319)
T 3ioy_A           85 FGPVSILCNNAG   96 (319)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             37999999987

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.48  E-value=0.013  Score=49.69  Aligned_cols=74  Identities=20%  Similarity=0.277  Sum_probs=50.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEEe
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vld  232 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++  ..+++++.. ..|..+.+  +.+.+.+...  +++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEKDD--PKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTTSC--HHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCchHH--HHHHHHHHHHHcCCCCEEEE
Confidence            467999987 9999999999988999 88888888776  334455422 23444422  3333333221  36999999


Q ss_pred             ccC
Q 019414          233 CTG  235 (341)
Q Consensus       233 ~~g  235 (341)
                      +.|
T Consensus        77 ~Ag   79 (239)
T 2ekp_A           77 AAA   79 (239)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            887

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.46  E-value=0.021  Score=50.48  Aligned_cols=88  Identities=16%  Similarity=0.252  Sum_probs=65.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+.+.|+..+      +  +.+.+.     ..|+|+.++.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~------~--l~ell~-----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV------D--LETLLK-----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC------C--HHHHHH-----HCSEEEECCC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc------C--HHHHHh-----hCCEEEEecC
Confidence            57799999999999999999999998 89999988876 56677777431      1  333332     2799998876


Q ss_pred             ChH----HH-HHHHHHhcCCCcEEEEEcc
Q 019414          236 NID----NM-ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~----~~-~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+    .+ ...+..++++ +.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~g-a~lin~ar  233 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKT-AILINTSR  233 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence            322    12 3567788887 88888864

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.45  E-value=0.013  Score=50.99  Aligned_cols=79  Identities=23%  Similarity=0.338  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPD-QVRGMLDQMTGELG  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999998888999 899998988775543    2333321   23433322 12222222221  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.45  E-value=0.013  Score=50.22  Aligned_cols=78  Identities=17%  Similarity=0.285  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +|..+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.    +++.|...   ..|-.+.+ ++.+.+.+...  +
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~-~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKK-DVEEFVRRTFETYS   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4778999987 8999999988889999 89999999887654    34456543   23443332 12222222222  4


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++++..|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999877

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.43  E-value=0.049  Score=47.49  Aligned_cols=87  Identities=21%  Similarity=0.224  Sum_probs=61.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      -+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...   .  +  ..+.+.+     .|+||-|+..+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~~~~~~-----aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA---A--T--PCEVVES-----CPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC---S--S--HHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---C--C--HHHHHhc-----CCEEEEEcCCH
Confidence            368999999999999999988998 89999999999888888776421   1  1  3333322     68888888765


Q ss_pred             HHHHHHH-------HHhcCCCcEEEEEc
Q 019414          238 DNMISAF-------ECVHDGWGVAVLVG  258 (341)
Q Consensus       238 ~~~~~~~-------~~l~~~~g~~v~~g  258 (341)
                      ..+...+       ..+.++ ..++..+
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            4444444       455564 5555553

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.43  E-value=0.018  Score=49.53  Aligned_cols=78  Identities=23%  Similarity=0.330  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce----ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD----FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~----vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...    ..|..+.+ .+.+.+.+...  
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRA-QCDALAGRAVEEF   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHH-HHHHHHHHHHHHh
Confidence            4678999986 9999999999889999 8999999988765432    233111    22333321 12222222211  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|+++++.|
T Consensus        87 g~id~lvnnAg   97 (262)
T 3pk0_A           87 GGIDVVCANAG   97 (262)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.41  E-value=0.017  Score=49.41  Aligned_cols=77  Identities=26%  Similarity=0.270  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee--cCCCCCChhHHHHHHHHhc--CCccEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTN--GGVDRS  230 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~i~~~~~--~~~d~v  230 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+..++++. ..  .|..+.+ .+.+.+.+...  +++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~-~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDER-ERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHH-HHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            3578999987 9999999998888999 88888888777444454432 22  2333321 12222222211  379999


Q ss_pred             EeccC
Q 019414          231 VECTG  235 (341)
Q Consensus       231 ld~~g  235 (341)
                      |++.|
T Consensus        82 v~~Ag   86 (256)
T 2d1y_A           82 VNNAA   86 (256)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.41  E-value=0.012  Score=52.83  Aligned_cols=135  Identities=13%  Similarity=0.143  Sum_probs=80.4

Q ss_pred             CEEEEECCCHHHHHHHHHHH-Hc-CCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEec
Q 019414          158 SSVAVFGLGAVGLAAAEGAR-IA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  233 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~-~~-g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~  233 (341)
                      -+|.|+|+|.+|...++.++ .. +++.+.+.++++++.+. .+++|+..+++  +    +.+    +... .+|+|+.|
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~----~~~----~l~~~~~D~V~i~   78 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--N----YKD----MIDTENIDAIFIV   78 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--C----HHH----HHTTSCCSEEEEC
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--C----HHH----HhcCCCCCEEEEe
Confidence            36899999999998877776 43 66345566788877654 45577754432  1    322    2233 79999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccc---cccceeee-cceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM---TKPINVLN-ERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~---~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      ++.....+.+..++..  |+.+++.-........   +....-.+ ++.+.....  .+....++.+.+++.+|.+-
T Consensus        79 tp~~~h~~~~~~al~~--G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~--~r~~p~~~~~~~~i~~g~iG  151 (346)
T 3cea_A           79 APTPFHPEMTIYAMNA--GLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFM--RRYDDSYRYAKKIVDNGDIG  151 (346)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCG--GGTCHHHHHHHHHHHTTTTC
T ss_pred             CChHhHHHHHHHHHHC--CCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecc--cccCHHHHHHHHHHHcCCCC
Confidence            9887788888888886  5666664321110000   00000123 444432221  22223578888999988763

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.39  E-value=0.0053  Score=53.16  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+...... ...|..+.+ .+.+.+.+...  +++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTDKY-TFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTCHH-HHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCCHH-HHHHHHHHHHHHCCCCCEEE
Confidence            3578999987 9999999998889999 888888887765543221111 123333321 12222222221  3799999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      ++.|.
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            98873

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.38  E-value=0.0046  Score=56.06  Aligned_cols=133  Identities=17%  Similarity=0.139  Sum_probs=81.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|.|+|.|.+|...+..++.. +++.+.++++++++.+.++++|+. +  +.+    +.+.+.   +..+|+|+.|+...
T Consensus         7 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~-~--~~~----~~~ll~---~~~~D~V~i~tp~~   76 (359)
T 3e18_A            7 QLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLK-I--YES----YEAVLA---DEKVDAVLIATPND   76 (359)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCC-B--CSC----HHHHHH---CTTCCEEEECSCGG
T ss_pred             cEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCc-e--eCC----HHHHhc---CCCCCEEEEcCCcH
Confidence            689999999998877777665 663334557888888777777763 2  222    333332   23699999999887


Q ss_pred             HHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCC
Q 019414          238 DNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  305 (341)
                      ...+.+.+++..  |+-|++.-+-....-...   ...-.+++.+.-..  ..+....++.+.+++++|.+
T Consensus        77 ~h~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           77 SHKELAISALEA--GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ--NRRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             GHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHC--CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--eeccCHHHHHHHHHHHcCCC
Confidence            788888888886  666777633211111100   00011234333222  22223467888889998876

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.37  E-value=0.018  Score=49.05  Aligned_cols=78  Identities=29%  Similarity=0.411  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCc---eecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT---DFVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~---~vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++..   ...|..+.+ .+.+.+.+...  +++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNPE-SIEAVLKAITDEFGGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHH-HHHHHHHHHHHHHCCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHH-HHHHHHHHHHHHcCCCC
Confidence            4678999986 9999999999999999 8999999988766543 33321   123443322 12222222221  3799


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      +++++.|
T Consensus        86 ~lv~nAg   92 (248)
T 3op4_A           86 ILVNNAG   92 (248)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.36  E-value=0.0019  Score=54.38  Aligned_cols=102  Identities=14%  Similarity=0.068  Sum_probs=68.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-----CCEEEEEcCChhhHHHHHHc----C-----Cce--ecCCCCCChhHH
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAG-----ASRIIGVDRSSKRFEEAKKF----G-----VTD--FVNTSEHDRPIQ  216 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g-----~~~vv~v~~~~~~~~~~~~~----g-----~~~--vv~~~~~~~~~~  216 (341)
                      .++++++||-+|+|. |..+..+++..+     ..+|++++.+++..+.+++.    +     ...  ++..+..+ .+.
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQ-VNE  154 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGG-CCH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHh-ccc
Confidence            578999999999876 888888888875     23999999999888777653    3     111  11111100 010


Q ss_pred             HHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          217 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       217 ~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +..  ...+.||+|+........++.+.+.|+++ |++++.-.
T Consensus       155 ~~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  194 (227)
T 2pbf_A          155 EEK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPIE  194 (227)
T ss_dssp             HHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEEE
T ss_pred             ccC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEc
Confidence            000  11247999987665556778899999998 98877643

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.36  E-value=0.014  Score=51.43  Aligned_cols=78  Identities=27%  Similarity=0.356  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLD-EMVRLADEAFRLLG  107 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhCC
Confidence            4678999987 9999999999989999 8999999988765432    234322   23443322 12222222221  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus       108 ~id~lvnnAg  117 (301)
T 3tjr_A          108 GVDVVFSNAG  117 (301)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.35  E-value=0.0065  Score=53.54  Aligned_cols=73  Identities=15%  Similarity=0.104  Sum_probs=52.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHHcCCc--eecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~--~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      ++.+++|+|+|++|.+++..+...|+.+|+++.++.++.+ ++++++..  .+++       + +.+.+.. ..+|+||+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~-~~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------L-AEAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------H-HHHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------H-HHHHhhh-ccCCEEEE
Confidence            5789999999999999999999899878999999988854 45556542  1211       2 1222222 25899999


Q ss_pred             ccCCh
Q 019414          233 CTGNI  237 (341)
Q Consensus       233 ~~g~~  237 (341)
                      |++..
T Consensus       211 ~t~~~  215 (297)
T 2egg_A          211 TTSVG  215 (297)
T ss_dssp             CSCTT
T ss_pred             CCCCC
Confidence            98753

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.35  E-value=0.032  Score=46.36  Aligned_cols=96  Identities=9%  Similarity=0.038  Sum_probs=60.1

Q ss_pred             CEEEEECC-CHHHHHHHHHHH-HcCCCEEEEEcCChh-hHHHHHHcCCc-ee--cCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          158 SSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSK-RFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~-~~g~~~vv~v~~~~~-~~~~~~~~g~~-~v--v~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      .+|||+|+ |.+|.+.++.+. ..|+ +|++++++++ +.+.+.+.+.. .+  .|..+.     +.+.+.. .++|++|
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~-----~~~~~~~-~~~d~vv   78 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQNP-----GXLEQAV-TNAEVVF   78 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTCH-----HHHHHHH-TTCSEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCCH-----HHHHHHH-cCCCEEE
Confidence            35999996 999999988887 8999 8999999988 66555322221 12  233321     2233333 2689999


Q ss_pred             eccCChHH-HHHHHHHhcCC-CcEEEEEccC
Q 019414          232 ECTGNIDN-MISAFECVHDG-WGVAVLVGVP  260 (341)
Q Consensus       232 d~~g~~~~-~~~~~~~l~~~-~g~~v~~g~~  260 (341)
                      ++.|.... ...+++.+... .++++.++..
T Consensus        79 ~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           79 VGAMESGSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             ESCCCCHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             EcCCCCChhHHHHHHHHHhcCCCeEEEEeec
Confidence            99886211 33444444432 2688877654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.35  E-value=0.015  Score=49.75  Aligned_cols=78  Identities=27%  Similarity=0.362  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEE-DWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            3678999987 9999999999989999 899998988776554 3344321   23433321 12222332222  3699


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus        82 ~lv~nAg   88 (254)
T 1hdc_A           82 GLVNNAG   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.34  E-value=0.011  Score=50.73  Aligned_cols=78  Identities=23%  Similarity=0.330  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c---CCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~---g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ +   +...   ..|..+.+ .+.+.+.+...  +
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTD-DIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            3678999987 9999999999989999 89999999887665432 2   2221   23433322 12222222221  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|+++++.|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.34  E-value=0.0071  Score=49.44  Aligned_cols=104  Identities=22%  Similarity=0.249  Sum_probs=68.1

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcC
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ...++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|...-+.....+  +. .+....++
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~-~~~~~~~~   92 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDG--HQ-NMDKYIDC   92 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSC--GG-GGGGTCCS
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HH-HHhhhccC
Confidence            34678899999998875 778888888864 2399999999988877665    3431111111111  11 11112234


Q ss_pred             CccEEEeccCC---------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          226 GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       226 ~~d~vld~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .+|+|+-..+.               ...++.+.+.|+++ |++++...
T Consensus        93 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           93 PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            79999854422               25788999999998 99987753

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.34  E-value=0.018  Score=49.21  Aligned_cols=78  Identities=15%  Similarity=0.231  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+.  .+.+.+.+.  +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--C
Confidence            4678999987 9999999999999999 899999988775543    2334422   234333220  123333333  5


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            79999998873

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.34  E-value=0.013  Score=49.92  Aligned_cols=76  Identities=18%  Similarity=0.321  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC-Cce-ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g-~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.++. +.. ..|..+.+  ..+.+.+.. +++|++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~-~~id~lv~   80 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKK--QIDQFANEV-ERLDVLFN   80 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHH--HHHHHHHHC-SCCSEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCHH--HHHHHHHHh-CCCCEEEE
Confidence            3678999987 9999999999888999 8999989887765443332 111 23333321  222332222 47999999


Q ss_pred             ccC
Q 019414          233 CTG  235 (341)
Q Consensus       233 ~~g  235 (341)
                      +.|
T Consensus        81 ~Ag   83 (246)
T 2ag5_A           81 VAG   83 (246)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            887

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.34  E-value=0.015  Score=50.52  Aligned_cols=78  Identities=19%  Similarity=0.272  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCC--c-ee--cCCCCCChhHHHHHHHHh--cCC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--T-DF--VNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~--~-~v--v~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +++..  . ..  .|..+.+ .+.+.+.+..  .++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEA-GARRLAQALGELSAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHH-HHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHH-HHHHHHHHHHHhcCC
Confidence            3678999987 9999999999888999 899999988775543 33321  1 11  2332221 1222222221  137


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|++|++.|
T Consensus       106 iD~lvnnAg  114 (276)
T 2b4q_A          106 LDILVNNAG  114 (276)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.32  E-value=0.04  Score=48.22  Aligned_cols=79  Identities=19%  Similarity=0.288  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CH--HHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCcee--cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~--~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|.++||+|+ |.  +|.+.++.+...|+ +|+.++++++..+.++    +.+....  .|..+.+ .+.+.+.+...  
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  107 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAA-SIDAVFETLEKKW  107 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHH-HHHHHHHHHHHhc
Confidence            4678999986 55  99999998888999 8888888865444333    2342222  2433322 12222222211  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus       108 g~iD~lVnnAG~  119 (293)
T 3grk_A          108 GKLDFLVHAIGF  119 (293)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999998873

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.31  E-value=0.036  Score=47.67  Aligned_cols=79  Identities=19%  Similarity=0.263  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC-----Cc-e--ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-----VT-D--FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g-----~~-~--vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +++.     .. .  ..|..+.+ .+.+.+.+... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQ-QLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHH-HHHHHHHHHHHH
Confidence            3678999987 9999999999988999 888898888765432 2221     11 1  12333321 12222222211 


Q ss_pred             -CCccEEEeccCC
Q 019414          225 -GGVDRSVECTGN  236 (341)
Q Consensus       225 -~~~d~vld~~g~  236 (341)
                       +++|++|++.|.
T Consensus        84 ~g~id~lv~~Ag~   96 (267)
T 2gdz_A           84 FGRLDILVNNAGV   96 (267)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             369999999874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.30  E-value=0.02  Score=48.83  Aligned_cols=78  Identities=21%  Similarity=0.242  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHH-HHHHcCCce---ecCCCCCChhHHHHHHHHhc--CCc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE-EAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGV  227 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~-~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~  227 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++ ++.+ .+++.+...   ..|..+.+ .+.+.+.+...  +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPG-DVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHH-HHHHHHHHHHHHcCCC
Confidence            3678999987 9999999999888999 888888877 5544 345555432   23443322 12222222211  479


Q ss_pred             cEEEeccC
Q 019414          228 DRSVECTG  235 (341)
Q Consensus       228 d~vld~~g  235 (341)
                      |++|++.|
T Consensus        84 d~lv~nAg   91 (249)
T 2ew8_A           84 DILVNNAG   91 (249)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.30  E-value=0.016  Score=48.82  Aligned_cols=77  Identities=21%  Similarity=0.252  Sum_probs=50.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcC-Cce-ecCCCCCChhHHHHHHHHhc--CCccEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDRS  230 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g-~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~v  230 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +++ +.. ..|..+.+ .+.+.+.+...  +++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEG-DWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH-HHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            457999987 9999999998888999 8999989887766543 343 221 23333321 12222222211  369999


Q ss_pred             EeccC
Q 019414          231 VECTG  235 (341)
Q Consensus       231 ld~~g  235 (341)
                      |++.|
T Consensus        83 i~~Ag   87 (234)
T 2ehd_A           83 VNNAG   87 (234)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.28  E-value=0.017  Score=49.81  Aligned_cols=78  Identities=23%  Similarity=0.302  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc-----CCce---ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVTD---FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~-----g~~~---vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++     +...   ..|..+.+ .+.+.+.+... 
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEA-QVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHH-HHHHHHHHHHHH
Confidence            3678999987 9999999998888999 8999989887755432 22     3322   23443322 12222322211 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|++|++.|
T Consensus        90 ~g~id~lv~nAg  101 (267)
T 1iy8_A           90 FGRIDGFFNNAG  101 (267)
T ss_dssp             HSCCSEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999876

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.28  E-value=0.017  Score=49.97  Aligned_cols=78  Identities=21%  Similarity=0.331  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCcee--cCCCCCChhHHHHHHHHhc--CCccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF--VNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~v--v~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++.....  .|..+.+ .+.+.+.+...  +++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQED-DVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHH-HHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            4678999987 9999999999989999 8999999888766543 3322122  3333321 12222222211  37999


Q ss_pred             EEeccC
Q 019414          230 SVECTG  235 (341)
Q Consensus       230 vld~~g  235 (341)
                      +|++.|
T Consensus        86 lv~nAg   91 (270)
T 1yde_A           86 VVNNAG   91 (270)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999876

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.27  E-value=0.02  Score=49.15  Aligned_cols=79  Identities=25%  Similarity=0.333  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCcee---cCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF---VNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~v---v~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+.    +++.|....   .|-.+.+ .+.+.+.+...  +
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~-~v~~~~~~~~~~~G   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDEL-AIEAAFSKLDAEGI   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHH-HHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHHCC
Confidence            4788899986 9999999999999999 89999999877543    344454332   2333221 23333333332  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        86 ~iDiLVNNAG~   96 (255)
T 4g81_D           86 HVDILINNAGI   96 (255)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999998874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.27  E-value=0.019  Score=49.20  Aligned_cols=79  Identities=19%  Similarity=0.311  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+.  .+.+.+.+...+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 9999999998888999 899998988775532    2234322   234333210  122223333325


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|+++++.|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.27  E-value=0.056  Score=47.75  Aligned_cols=74  Identities=19%  Similarity=0.252  Sum_probs=54.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      -+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...     .+  ..+.+..     .|+||-|+..+
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-----~~--~~~~~~~-----aDvvi~~vp~~   88 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-----ES--PAEVIKK-----CKYTIAMLSDP   88 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-----SS--HHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-----CC--HHHHHHh-----CCEEEEEcCCH
Confidence            479999999999999999999998 99999999999988888876421     11  3333322     57888877665


Q ss_pred             HHHHHHH
Q 019414          238 DNMISAF  244 (341)
Q Consensus       238 ~~~~~~~  244 (341)
                      ..+...+
T Consensus        89 ~~~~~v~   95 (310)
T 3doj_A           89 CAALSVV   95 (310)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444444

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.26  E-value=0.021  Score=49.09  Aligned_cols=78  Identities=32%  Similarity=0.500  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc----CCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++    +...   ..|..+.+ .+.+.+.+...  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPE-GVDAVVESVRSSF   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            3578999987 9999999999888999 8999989887755432 22    4322   13443321 12222222211  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        84 g~id~lv~~Ag   94 (263)
T 3ai3_A           84 GGADILVNNAG   94 (263)
T ss_dssp             SSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999887

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.25  E-value=0.019  Score=48.67  Aligned_cols=79  Identities=19%  Similarity=0.242  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc--e--ecCCCCCChh-H---HHHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT--D--FVNTSEHDRP-I---QEVIAEM  222 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~--~--vv~~~~~~~~-~---~~~i~~~  222 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+..  .  .++.+..+.+ +   .+.+.+.
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            4678999987 9999999998889999 8999999988765433    33321  1  2233212211 2   2222222


Q ss_pred             hcCCccEEEeccCC
Q 019414          223 TNGGVDRSVECTGN  236 (341)
Q Consensus       223 ~~~~~d~vld~~g~  236 (341)
                      . +++|++|++.|.
T Consensus        92 ~-g~id~lv~nAg~  104 (247)
T 3i1j_A           92 F-GRLDGLLHNASI  104 (247)
T ss_dssp             H-SCCSEEEECCCC
T ss_pred             C-CCCCEEEECCcc
Confidence            2 379999998873

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=96.25  E-value=0.015  Score=49.94  Aligned_cols=78  Identities=19%  Similarity=0.286  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce---ecCCCCCChhHH---HHHHHHhcCCc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDRPIQ---EVIAEMTNGGV  227 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~---vv~~~~~~~~~~---~~i~~~~~~~~  227 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++...   ..|..+.+ .+.   +.+.+.. +++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~-g~i   83 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLN-EIAVLGAAAGQTL-GAI   83 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHH-HHHHHHHHHHHHH-SSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHH-HHHHHHHHHHHHh-CCC
Confidence            4678999987 9999999999989999 8999999988866544 344322   22333322 122   2222222 379


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+++++.|.
T Consensus        84 d~lv~nAg~   92 (255)
T 4eso_A           84 DLLHINAGV   92 (255)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.25  E-value=0.018  Score=49.56  Aligned_cols=78  Identities=24%  Similarity=0.390  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPK-AVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHH-HHHHHHHHHHHHcCCCc
Confidence            3578999987 9999999999888999 8999999988766543 343221   23433322 12222222211  3699


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus        83 ~lvnnAg   89 (263)
T 2a4k_A           83 GVAHFAG   89 (263)
T ss_dssp             EEEEGGG
T ss_pred             EEEECCC
Confidence            9999887

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.25  E-value=0.053  Score=47.43  Aligned_cols=86  Identities=19%  Similarity=0.242  Sum_probs=61.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|.|+|+|.+|...+..+...|. .|++.++++++.+.+++.|+...   .  +  ..+.+.     ..|+||.|+..+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA---S--T--AKAIAE-----QCDVIITMLPNSP   73 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC---S--S--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCeec---C--C--HHHHHh-----CCCEEEEECCCHH
Confidence            69999999999999888888898 89999999999888877765321   1  1  333332     2799999998655


Q ss_pred             HHHHHH-------HHhcCCCcEEEEEc
Q 019414          239 NMISAF-------ECVHDGWGVAVLVG  258 (341)
Q Consensus       239 ~~~~~~-------~~l~~~~g~~v~~g  258 (341)
                      .++..+       ..+.++ ..++.+.
T Consensus        74 ~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            555444       455665 6665554

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.24  E-value=0.031  Score=49.54  Aligned_cols=89  Identities=18%  Similarity=0.258  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++. .++++|+...      +  +.+.+.     ..|+|+.++
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~------~--l~ell~-----~aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKAV------S--LEELLK-----NSDVISLHV  204 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEEC------C--HHHHHH-----HCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCceec------C--HHHHHh-----hCCEEEEec
Confidence            367899999999999999999999998 899999887764 4567776521      1  433332     279999887


Q ss_pred             CChH----HH-HHHHHHhcCCCcEEEEEcc
Q 019414          235 GNID----NM-ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       235 g~~~----~~-~~~~~~l~~~~g~~v~~g~  259 (341)
                      ...+    .+ +..+..++++ +.++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~g-a~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDN-VIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence            6422    12 4567788887 88887764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.23  E-value=0.019  Score=49.27  Aligned_cols=79  Identities=27%  Similarity=0.340  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+. .++++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQD-SIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHH-HHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHH-HHHHHHHHHHHHcCCCC
Confidence            4678999987 9999999998888999 89999998887654 34454422   23443322 12222222221  3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99998873

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.23  E-value=0.025  Score=47.55  Aligned_cols=77  Identities=26%  Similarity=0.312  Sum_probs=50.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-----HcCCcee---cCCCCCChhHHH---HHHHHhc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVTDF---VNTSEHDRPIQE---VIAEMTN  224 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-----~~g~~~v---v~~~~~~~~~~~---~i~~~~~  224 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.     +.+....   .|..+.+ .+.+   .+.+.. 
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~-   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAE-SVEEFSKKVLERF-   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHH-HHHHHCC-HHHHH-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHH-HHHHHHHHHHHhc-
Confidence            568999987 9999999999999999 8999999987755432     2343321   2333321 1221   122222 


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus        79 g~id~li~~Ag~   90 (235)
T 3l77_A           79 GDVDVVVANAGL   90 (235)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            369999998873

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.23  E-value=0.016  Score=50.00  Aligned_cols=79  Identities=25%  Similarity=0.333  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCcee---cCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDF---VNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~v---v~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. .++++....   .|..+.+ .+.+.+.+...  +++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRK-SIKQLAEVAEREMEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHH-HHHHHHHHHHHHHTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHH-HHHHHHHHHHHHcCCCC
Confidence            4678999987 9999999999999999 88888898887655 445554322   2333321 12222222211  3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.23  E-value=0.031  Score=47.19  Aligned_cols=101  Identities=18%  Similarity=0.180  Sum_probs=67.5

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCC-----ceecCCCCCChhHHHHHHHHh
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGV-----TDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~-----~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      ....++||++||=+|+|. |..+..+|+..|. .+|++++.+++..+.+++.-.     ..+. .+..+  . +.. ...
T Consensus        71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~-~d~~~--p-~~~-~~~  144 (233)
T 4df3_A           71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPIL-GDARF--P-EKY-RHL  144 (233)
T ss_dssp             SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEE-SCTTC--G-GGG-TTT
T ss_pred             hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEE-EeccC--c-ccc-ccc
Confidence            456899999999999864 7888889998874 499999999999887765322     1222 11111  0 000 011


Q ss_pred             cCCccEEEeccCCh----HHHHHHHHHhcCCCcEEEEE
Q 019414          224 NGGVDRSVECTGNI----DNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       224 ~~~~d~vld~~g~~----~~~~~~~~~l~~~~g~~v~~  257 (341)
                      .+.+|+||....-+    ..+..+.+.|+|+ |++++.
T Consensus       145 ~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          145 VEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             CCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            23689888544332    2567778899998 998875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.22  E-value=0.021  Score=49.36  Aligned_cols=80  Identities=21%  Similarity=0.351  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+.  .+.+.+.+..++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999987 9999999999989999 899999988775533    2234322   234333220  122333333335


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999998873

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.22  E-value=0.044  Score=46.85  Aligned_cols=41  Identities=22%  Similarity=0.241  Sum_probs=34.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  197 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~  197 (341)
                      .+.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            3578999987 9999999988888999 899998988776544

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.22  E-value=0.021  Score=48.67  Aligned_cols=78  Identities=19%  Similarity=0.332  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+ .+.+.+.+...  +
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQ-GVDAAVASTVEALG   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            3578999987 9999999998888999 8999989887765432    234322   23433322 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        84 ~id~lv~nAg   93 (247)
T 2jah_A           84 GLDILVNNAG   93 (247)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999877

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.22  E-value=0.02  Score=48.86  Aligned_cols=101  Identities=19%  Similarity=0.197  Sum_probs=66.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh---
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT---  223 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~--g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~---  223 (341)
                      ...++.+||-+|+| .|..++.+++.+  +. +|++++.+++..+.+++    .|...-+.....+  ..+.+..+.   
T Consensus        76 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~  151 (247)
T 1sui_A           76 KLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDE  151 (247)
T ss_dssp             HHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSG
T ss_pred             HhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HHHHHHHHHhcc
Confidence            34567899999876 377788888876  45 99999999988877664    4542212122222  333333332   


Q ss_pred             --cCCccEEEeccC---ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          224 --NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 --~~~~d~vld~~g---~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                        .+.||+||-...   ....++.+.+.|+++ |.++.-.
T Consensus       152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~  190 (247)
T 1sui_A          152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  190 (247)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred             CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence              357999983222   235678899999998 9988754

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.21  E-value=0.016  Score=50.10  Aligned_cols=78  Identities=21%  Similarity=0.305  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDAT-AVDALVESTLKEFG  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHH-HHHHHHHHHHHHcC
Confidence            3678899987 9999999998888999 899999988776543    2334321   23443322 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus       105 ~iD~lvnnAg  114 (270)
T 3ftp_A          105 ALNVLVNNAG  114 (270)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999887

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.21  E-value=0.021  Score=51.79  Aligned_cols=92  Identities=17%  Similarity=0.160  Sum_probs=63.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|+|+|+|.+|..++..+.. .. .|.+++++.++.+.+++......+|..+.     +.+.+.. .+.|+|++|++..-
T Consensus        18 kilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d~-----~~l~~~~-~~~DvVi~~~p~~~   89 (365)
T 3abi_A           18 KVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASNF-----DKLVEVM-KEFELVIGALPGFL   89 (365)
T ss_dssp             EEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTCH-----HHHHHHH-TTCSEEEECCCGGG
T ss_pred             EEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCCH-----HHHHHHH-hCCCEEEEecCCcc
Confidence            69999999999988877753 34 78888899998888776543334454332     2333333 25899999998755


Q ss_pred             HHHHHHHHhcCCCcEEEEEcc
Q 019414          239 NMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       239 ~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ....+-.|+..+ -.++.+..
T Consensus        90 ~~~v~~~~~~~g-~~yvD~s~  109 (365)
T 3abi_A           90 GFKSIKAAIKSK-VDMVDVSF  109 (365)
T ss_dssp             HHHHHHHHHHHT-CEEEECCC
T ss_pred             cchHHHHHHhcC-cceEeeec
Confidence            556666677775 67777653

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.21  E-value=0.022  Score=49.11  Aligned_cols=79  Identities=25%  Similarity=0.443  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H----HcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-K----KFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +    +.+...   ..|..+.+ .+.+.+.+...  
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYE-EVKKLLEAVKEKF   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999999888999 899998988765433 2    224432   23443321 12222222211  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus        98 g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 GKLDTVVNAAGI  109 (267)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998873

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.21  E-value=0.024  Score=49.52  Aligned_cols=77  Identities=17%  Similarity=0.244  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce---ecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~---vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ ++...   ..|..+.+ .+.+.+.+.  +++|++
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~--~~iD~l   90 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLS-SVRRFADGV--SGADVL   90 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHH-HHHHHHHTC--CCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHH-HHHHHHHhc--CCCCEE
Confidence            4678999987 9999999998888999 89999999888766543 44322   13333321 122222222  479999


Q ss_pred             EeccCC
Q 019414          231 VECTGN  236 (341)
Q Consensus       231 ld~~g~  236 (341)
                      |++.|.
T Consensus        91 v~nAg~   96 (291)
T 3rd5_A           91 INNAGI   96 (291)
T ss_dssp             EECCCC
T ss_pred             EECCcC
Confidence            998873

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.21  E-value=0.017  Score=49.57  Aligned_cols=95  Identities=24%  Similarity=0.304  Sum_probs=65.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      +.++++||-+|+|. |..++.+++ .|. +|++++.++...+.+++    .+..  +.....+  +.+.   +..+.+|+
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d--~~~~---~~~~~fD~  187 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGS--LEAA---LPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESC--HHHH---GGGCCEEE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECC--hhhc---CcCCCCCE
Confidence            67899999999865 667776666 577 99999999998877765    3432  2222222  3322   23458999


Q ss_pred             EEeccCC---hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          230 SVECTGN---IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       230 vld~~g~---~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      |+-....   ...++.+.+.++|+ |++++.+.
T Consensus       188 Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~  219 (254)
T 2nxc_A          188 LVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             EEECCcHHHHHHHHHHHHHHcCCC-CEEEEEee
Confidence            9854321   24577888899998 99988764

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.20  E-value=0.016  Score=46.64  Aligned_cols=100  Identities=18%  Similarity=0.269  Sum_probs=68.0

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCC-ceecCCCCCChhHHHHHHHHh
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-TDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~-~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      .....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++    .+. ..+ .....+  +.+.   +.
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~~~d--~~~~---~~   96 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEGD--APEA---LC   96 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEESC--HHHH---HT
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcce-EEEecC--HHHh---cc
Confidence            4456788999999999876 77777777766 4 99999999988887765    343 111 111122  3331   22


Q ss_pred             c-CCccEEEeccC---ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          224 N-GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 ~-~~~d~vld~~g---~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      . +.+|+|+-...   -...++.+.+.|+++ |+++...
T Consensus        97 ~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~  134 (192)
T 1l3i_A           97 KIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (192)
T ss_dssp             TSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            2 37999985532   135678888999997 9988764

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.19  E-value=0.016  Score=50.32  Aligned_cols=79  Identities=23%  Similarity=0.393  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCC---ce---ecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV---TD---FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~---~~---vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+.   ..   ..|..+.+ .+.+.+.+...
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~   87 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNED-ETARAVDAVTA   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHH-HHHHHHHHHHH
Confidence            3678999986 9999999998888999 899999988775433    33333   11   12333322 12222322222


Q ss_pred             --CCccEEEeccCC
Q 019414          225 --GGVDRSVECTGN  236 (341)
Q Consensus       225 --~~~d~vld~~g~  236 (341)
                        +++|+++++.|.
T Consensus        88 ~~g~id~lv~nAg~  101 (281)
T 3svt_A           88 WHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence              379999998874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.18  E-value=0.021  Score=48.50  Aligned_cols=78  Identities=24%  Similarity=0.332  Sum_probs=51.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+ .+.+.+.+...  ++
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIE-SIQNFFAEIKAENLA   82 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence            568899987 9999999988888999 8999999887765433    334332   23433321 13333333222  37


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (247)
T 3lyl_A           83 IDILVNNAGI   92 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.18  E-value=0.021  Score=49.37  Aligned_cols=79  Identities=22%  Similarity=0.252  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .+.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+..  .+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE-DIYSSAKKVKAEIG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHH-HHHHHHHHHHHHCC
Confidence            4678999987 9999999999888999 899998988765543    2334322   23433321 1222222221  13


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999998873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.17  E-value=0.021  Score=49.37  Aligned_cols=79  Identities=19%  Similarity=0.286  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEV-SVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHH-HHHHHHHHHHHHcCCCC
Confidence            3678999987 9999999999989999 899999988776543 4455422   23443322 12222222211  3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998773

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.17  E-value=0.022  Score=48.89  Aligned_cols=78  Identities=10%  Similarity=0.276  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce----ecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD----FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~----vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .|.++||+|+ |  ++|++.++.+...|+ +|+.+++++++.+.+.    +++...    ..|-.+.+ +..+.+.+...
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~   82 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDE-EVINGFEQIGK   82 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHH-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHH-HHHHHHHHHHH
Confidence            4788999986 4  899999999999999 8999999887765543    334321    23443322 12222222221


Q ss_pred             --CCccEEEeccC
Q 019414          225 --GGVDRSVECTG  235 (341)
Q Consensus       225 --~~~d~vld~~g  235 (341)
                        +++|+++++.|
T Consensus        83 ~~G~iD~lvnnAg   95 (256)
T 4fs3_A           83 DVGNIDGVYHSIA   95 (256)
T ss_dssp             HHCCCSEEEECCC
T ss_pred             HhCCCCEEEeccc
Confidence              47999999876

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.17  E-value=0.021  Score=49.66  Aligned_cols=78  Identities=23%  Similarity=0.253  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAK-DAESMVEKTTAKWGRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            3678999987 9999999999889999 899999988876554 4455432   23433322 12222222221  3799


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus       104 ~lv~nAg  110 (277)
T 4dqx_A          104 VLVNNAG  110 (277)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.17  E-value=0.034  Score=47.41  Aligned_cols=72  Identities=22%  Similarity=0.256  Sum_probs=49.0

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      -.+.++||+|+ |++|.+.++.+...|+ +|+.++++++.   +++++.... .|. ..+  ....+.+..  ++|++|+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~~D~-~~~--~~~~~~~~~--~iD~lv~   87 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVVCDL-RKD--LDLLFEKVK--EVDILVL   87 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEECCT-TTC--HHHHHHHSC--CCSEEEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEEeeH-HHH--HHHHHHHhc--CCCEEEE
Confidence            35778999987 9999999998888999 89999888744   344442222 333 112  333333322  6999999


Q ss_pred             ccC
Q 019414          233 CTG  235 (341)
Q Consensus       233 ~~g  235 (341)
                      +.|
T Consensus        88 ~Ag   90 (249)
T 1o5i_A           88 NAG   90 (249)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            887

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.16  E-value=0.022  Score=48.94  Aligned_cols=78  Identities=14%  Similarity=0.207  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc-e--ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT-D--FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~--vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +++... .  ..|..+.+ .+.+.+.+...  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPA-QWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            3678999987 9999999998888999 899998988776544 333321 1  23433322 12222222211  3699


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus        84 ~lv~~Ag   90 (260)
T 1nff_A           84 VLVNNAG   90 (260)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.16  E-value=0.022  Score=49.70  Aligned_cols=79  Identities=18%  Similarity=0.266  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc---CCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---GVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~---g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      ++.++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+. ++   +...   ..|..+.+ .+.+.+.+...  +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDEL-QMRNAVRDLVLKFG  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            4678999987 9999999998888999 8999999988765443 22   3222   23333321 12222222221  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.15  E-value=0.07  Score=46.08  Aligned_cols=79  Identities=23%  Similarity=0.324  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+.+ ++++.+.    +++.+...   ..|..+.+ .+.+.+.+...  
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAE-AIEQAIRETVEAL  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999998888999 7777644 4444332    33345432   23333322 12222332222  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus       108 g~iD~lvnnAg~  119 (271)
T 3v2g_A          108 GGLDILVNSAGI  119 (271)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            379999998873

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.15  E-value=0.02  Score=49.88  Aligned_cols=79  Identities=20%  Similarity=0.260  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce---ecCCCCCCh--hHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDR--PIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~---vv~~~~~~~--~~~~~i~~~~~~~~d  228 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++...   ..|..+.+.  .+.+.+.+.. +++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF-GKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            3678999986 9999999999989999 8999999988866544 344322   223333210  1222232222 3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99998873

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.14  E-value=0.014  Score=50.82  Aligned_cols=78  Identities=26%  Similarity=0.342  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H---cCC---ce---ecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGV---TD---FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~---~~---vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +   .+.   ..   ..|..+.+ .+.+.+.+...
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~   82 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTED-GQDQIINSTLK   82 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHH-HHHHHHHHHHH
Confidence            3568999986 9999999998888999 8999999887765432 2   232   11   13443322 12222222211


Q ss_pred             --CCccEEEeccC
Q 019414          225 --GGVDRSVECTG  235 (341)
Q Consensus       225 --~~~d~vld~~g  235 (341)
                        +++|++|++.|
T Consensus        83 ~~g~iD~lv~nAg   95 (280)
T 1xkq_A           83 QFGKIDVLVNNAG   95 (280)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              36999999876

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.14  E-value=0.096  Score=40.81  Aligned_cols=95  Identities=8%  Similarity=0.078  Sum_probs=58.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHHHH---cCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS-SKRFEEAKK---FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~-~~~~~~~~~---~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      ..+++|.|+|.+|...++.+...|. .|++++++ +++.+.+++   .|...+. -+..+   .+.+.+..-.++|.|+-
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~-gd~~~---~~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GDSND---SSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SCTTS---HHHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEE-cCCCC---HHHHHHcChhhCCEEEE
Confidence            4679999999999999999998998 88888886 465544442   2443332 22122   12333332247999999


Q ss_pred             ccCChHH---HHHHHHHhcCCCcEEEEE
Q 019414          233 CTGNIDN---MISAFECVHDGWGVAVLV  257 (341)
Q Consensus       233 ~~g~~~~---~~~~~~~l~~~~g~~v~~  257 (341)
                      ++++.+.   +....+.+.+. .+++..
T Consensus        78 ~~~~d~~n~~~~~~a~~~~~~-~~ii~~  104 (153)
T 1id1_A           78 LSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             ecCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence            9887442   22333444444 455443

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=96.14  E-value=0.022  Score=49.14  Aligned_cols=78  Identities=14%  Similarity=0.267  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC--c-e--ecCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV--T-D--FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~--~-~--vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+. .++++.  . .  ..|..+.+ .+.+.+.+...  ++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDE-DVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHH-HHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            4678999987 9999999998888999 88888888776543 334432  1 1  12333321 12222222211  36


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|++|++.|
T Consensus        93 id~li~~Ag  101 (278)
T 2bgk_A           93 LDIMFGNVG  101 (278)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999876

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.14  E-value=0.021  Score=49.17  Aligned_cols=79  Identities=19%  Similarity=0.293  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g   87 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDA-QVAHLVDETMKAYG   87 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHTS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 8999999998888999 8999999987765432    334322   23443322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        88 ~id~lv~nAg~   98 (264)
T 3ucx_A           88 RVDVVINNAFR   98 (264)
T ss_dssp             CCSEEEECCCS
T ss_pred             CCcEEEECCCC
Confidence            79999998754

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.14  E-value=0.022  Score=49.06  Aligned_cols=79  Identities=16%  Similarity=0.089  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH---HHcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA---KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~---~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+   ++.+...   ..|..+.+ ++.+.+.+...  ++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDA-QCRDAVAQTIATFGR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHH-HHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence            4778899986 8999999988889999 888888877664443   3344322   23443322 12222222222  47


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus        84 iDiLVNnAGi   93 (258)
T 4gkb_A           84 LDGLVNNAGV   93 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.13  E-value=0.024  Score=49.09  Aligned_cols=79  Identities=28%  Similarity=0.357  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCcee---cCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v---v~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+....   .|..+.+ .+.+.+.+..  .+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSES-EIIEAFARLDEQGI  102 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHH-HHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHCC
Confidence            3678999987 9999999999889999 899999988775543    23344322   2333221 1222222221  23


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus       103 ~iD~lv~nAg~  113 (271)
T 4ibo_A          103 DVDILVNNAGI  113 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.13  E-value=0.019  Score=49.16  Aligned_cols=78  Identities=29%  Similarity=0.383  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+. .++++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEK-DVQTALALAKGKFGRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHH-HHHHHHHHHHHHCCCCC
Confidence            4678999987 9999999999988999 88888888776554 34454322   13333321 12222222211  3799


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus        89 ~li~~Ag   95 (265)
T 2o23_A           89 VAVNCAG   95 (265)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999876

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.13  E-value=0.032  Score=48.24  Aligned_cols=88  Identities=15%  Similarity=0.146  Sum_probs=61.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +.+++|+|+|++|.+++..+...| .+|+++.|+.+|.+.+.+++.. ++.+++    +         ..+|+||+|++.
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la~~~~~-~~~~~~----l---------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQRLGCD-CFMEPP----K---------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHHHHTCE-EESSCC----S---------SCCSEEEECCTT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHCCCe-EecHHH----h---------ccCCEEEEcccC
Confidence            889999999999999999999999 5999999999887655577753 333322    1         158999999764


Q ss_pred             hH----HH--HHHHHHhcCCCcEEEEEccC
Q 019414          237 ID----NM--ISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       237 ~~----~~--~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ..    .+  +.+...+.++ ..++.+-..
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~-~~v~D~vY~  211 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEG-KLAYDLAYG  211 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHC-SEEEESCCS
T ss_pred             CCCCCCCCChHHHHhhCCCC-CEEEEeCCC
Confidence            21    11  1222356676 777776643

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.13  E-value=0.018  Score=54.21  Aligned_cols=92  Identities=21%  Similarity=0.200  Sum_probs=68.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -.|.+|+|+|.|.+|..+++.++.+|+ +|++.+++..+.......|... .     +  +.+.+     ...|+|+-++
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~-~-----~--l~ell-----~~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV-V-----T--MEYAA-----DKADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE-C-----C--HHHHT-----TTCSEEEECS
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe-C-----C--HHHHH-----hcCCEEEECC
Confidence            468899999999999999999999999 9999999887754444456532 1     1  33222     2489999988


Q ss_pred             CChHHH-HHHHHHhcCCCcEEEEEccCC
Q 019414          235 GNIDNM-ISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       235 g~~~~~-~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +....+ ...++.++++ ..++.++...
T Consensus       341 ~t~~lI~~~~l~~MK~g-AilINvgrg~  367 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHN-AIVCNIGHFD  367 (494)
T ss_dssp             SSSCSBCHHHHHHCCTT-EEEEECSSSS
T ss_pred             CcccccCHHHHhhCCCC-cEEEEcCCCc
Confidence            654444 4677888997 8888887543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.13  E-value=0.018  Score=50.56  Aligned_cols=79  Identities=15%  Similarity=0.188  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHH---cCCce----ecCCCCCChh---HHHHHHHHh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKK---FGVTD----FVNTSEHDRP---IQEVIAEMT  223 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~---~g~~~----vv~~~~~~~~---~~~~i~~~~  223 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. +++   .+...    ..|..+....   +.+.+.+..
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            4678999987 9999999988888999 89999999877543 222   23221    2344443111   222232222


Q ss_pred             cCCccEEEeccCC
Q 019414          224 NGGVDRSVECTGN  236 (341)
Q Consensus       224 ~~~~d~vld~~g~  236 (341)
                       +++|++|++.|.
T Consensus        90 -g~iD~lv~nAg~  101 (311)
T 3o26_A           90 -GKLDILVNNAGV  101 (311)
T ss_dssp             -SSCCEEEECCCC
T ss_pred             -CCCCEEEECCcc
Confidence             379999999884

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=96.13  E-value=0.023  Score=48.76  Aligned_cols=78  Identities=23%  Similarity=0.360  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H---cCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. +   .+...   ..|..+.+ .+.+.+.+...  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEE-AVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHhC
Confidence            3678999987 9999999999999999 8888889887755432 2   24322   23443321 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        84 ~id~lv~nAg   93 (262)
T 1zem_A           84 KIDFLFNNAG   93 (262)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999876

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.12  E-value=0.015  Score=49.99  Aligned_cols=79  Identities=23%  Similarity=0.290  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSD-AIAAFATGVLAAHG  105 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHH-HHHHHHHHHHHhcC
Confidence            4678999987 9999999988888899 8999999988765432    334322   23433322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus       106 ~id~lv~~Ag~  116 (262)
T 3rkr_A          106 RCDVLVNNAGV  116 (262)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.11  E-value=0.019  Score=48.83  Aligned_cols=78  Identities=26%  Similarity=0.292  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC----Cce-ecCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG----VTD-FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g----~~~-vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +++.    +.. ..|..+.+ .+.+.+.+...  ++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDED-GWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHH-HHHHHHHHHHHHHSS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence            3578999987 9999999998888999 899998988766543 3332    111 12333321 12222222211  36


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|++|++.|
T Consensus        83 id~li~~Ag   91 (251)
T 1zk4_A           83 VSTLVNNAG   91 (251)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999887

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.11  E-value=0.021  Score=49.60  Aligned_cols=79  Identities=23%  Similarity=0.348  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g  100 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTD-EVHAAVAAAVERFG  100 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHH-HHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999988888999 8999999988765432    234332   13433322 12222222221  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus       101 ~id~lv~nAg~  111 (279)
T 3sju_A          101 PIGILVNSAGR  111 (279)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999998873

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.11  E-value=0.024  Score=48.60  Aligned_cols=78  Identities=22%  Similarity=0.315  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEA-DVDAAVEAALSKFGKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHH-HHHHHHHHHHHhcCCCC
Confidence            3678999987 9999999999889999 899999998886654 3454432   23333321 12222222221  3799


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus        86 ~li~~Ag   92 (261)
T 3n74_A           86 ILVNNAG   92 (261)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            9999877

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.11  E-value=0.019  Score=48.60  Aligned_cols=78  Identities=27%  Similarity=0.372  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-----cCCce---ecCCCCCChhHHHHHHHHh--c
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD---FVNTSEHDRPIQEVIAEMT--N  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-----~g~~~---vv~~~~~~~~~~~~i~~~~--~  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+     .+...   ..|..+.+ .+.+.+.+..  .
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEE-SINKAFEEIYNLV   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHH-HHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHH-HHHHHHHHHHHhc
Confidence            3578899987 9999999998888999 89999898877554322     24322   12333321 1222222221  1


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        84 ~~~d~vi~~Ag   94 (248)
T 2pnf_A           84 DGIDILVNNAG   94 (248)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.10  E-value=0.04  Score=49.08  Aligned_cols=134  Identities=14%  Similarity=0.144  Sum_probs=75.8

Q ss_pred             EEEEECCCHHHHHH-HHHHHHcCCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a-~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|.|+|+|.+|... +..++..+.+.+.++++++++.+. .+++|...++  .+    +.+.+.   ...+|+|+.++..
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~~----~~~~l~---~~~~D~V~i~tp~   72 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV--TS----VEELVG---DPDVDAVYVSTTN   72 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB--SC----HHHHHT---CTTCCEEEECSCG
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc--CC----HHHHhc---CCCCCEEEEeCCh
Confidence            58899999999876 533333777444466778777654 5567764322  11    332221   1269999999987


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  305 (341)
                      ....+.+..++..  |+-+++.-+.........   ...-.+++.+.-..  ..+....++.+.+++++|.+
T Consensus        73 ~~h~~~~~~al~~--Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~--~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           73 ELHREQTLAAIRA--GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNH--HLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             GGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC--CGGGSHHHHHHHHHHHTTTT
T ss_pred             hHhHHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEee--hhhcCHHHHHHHHHHHcCCC
Confidence            6777788888876  566666532111100000   00011344433222  12222357788889998866

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.09  E-value=0.005  Score=49.80  Aligned_cols=101  Identities=12%  Similarity=0.150  Sum_probs=65.3

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCC
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      ...++++++||=+|+|. |..+..+++. +. +|++++.+++..+.+++    .+.+.+--.. .+  . ..+....++.
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~--~-~~l~~~~~~~   89 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG--H-ENLDHYVREP   89 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC--G-GGGGGTCCSC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc--H-HHHHhhccCC
Confidence            34678899999998864 7777788877 66 99999999988877654    3432211001 11  1 1111223347


Q ss_pred             ccEEEeccCC---------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          227 VDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       227 ~d~vld~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ||+|+-..+.               ...++.+.+.|+|+ |+++....
T Consensus        90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  136 (185)
T 3mti_A           90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY  136 (185)
T ss_dssp             EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            9998754221               12457888999998 99988754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.09  E-value=0.027  Score=48.78  Aligned_cols=78  Identities=26%  Similarity=0.300  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc---CCce---ecCCCCCChhHHHHHHHHh--cCC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF---GVTD---FVNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~---g~~~---vv~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++++..+..+++   +...   ..|..+.+  -.+.+.+..  .++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~--~v~~~~~~~~~~g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLE--GAANVAEELAATRR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHH--HHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHH--HHHHHHHHHHhcCC
Confidence            4678999987 9999999998889999 888888766555444443   3321   23333322  222222211  147


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|++.|.
T Consensus       107 iD~lv~nAg~  116 (273)
T 3uf0_A          107 VDVLVNNAGI  116 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999998873

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.09  E-value=0.02  Score=49.64  Aligned_cols=79  Identities=20%  Similarity=0.249  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPD-SVRALFTATVEKFGRVD  104 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            4677899987 9999999998889999 899999998876554 4454321   22333322 12222222211  3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=96.09  E-value=0.0094  Score=51.99  Aligned_cols=79  Identities=16%  Similarity=0.223  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc---CCc--e--ecCCCCCCh--hHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---GVT--D--FVNTSEHDR--PIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~---g~~--~--vv~~~~~~~--~~~~~i~~~~~  224 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++   +..  .  ..|..+.+.  .+.+.+.+.. 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            4678999987 9999999998888999 8999999987755432 22   221  1  234433220  1222222222 


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.09  E-value=0.034  Score=48.67  Aligned_cols=36  Identities=31%  Similarity=0.445  Sum_probs=32.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ...+|+|+|+|++|..+++.+-..|..++..++.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            357899999999999999999999999999998765

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.08  E-value=0.019  Score=49.21  Aligned_cols=79  Identities=23%  Similarity=0.267  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQ-HREAVIKAALDQFG   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999888888899 899999988775543    2334332   23333322 12222222221  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.08  E-value=0.0077  Score=50.75  Aligned_cols=102  Identities=18%  Similarity=0.182  Sum_probs=68.0

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--cee--cCCCCCChhHHHHHHHHhcC
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDF--VNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~~v--v~~~~~~~~~~~~i~~~~~~  225 (341)
                      ....++++++||-+|+|. |..+..+++..|..+|++++.+++..+.+++.-.  +.+  +..+..+  .. .... ..+
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~--~~-~~~~-~~~  142 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANK--PQ-EYAN-IVE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC--GG-GGTT-TSC
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCC--cc-cccc-cCc
Confidence            345677899999999876 8888889998875599999999998877765321  111  1111111  00 0001 114


Q ss_pred             CccEEEeccCCh---H-HHHHHHHHhcCCCcEEEEE
Q 019414          226 GVDRSVECTGNI---D-NMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       226 ~~d~vld~~g~~---~-~~~~~~~~l~~~~g~~v~~  257 (341)
                      .+|+|+.....+   . .++.+.+.|+|+ |++++.
T Consensus       143 ~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            699999655443   3 488889999998 998886

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.08  E-value=0.036  Score=49.83  Aligned_cols=134  Identities=11%  Similarity=0.081  Sum_probs=81.7

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~-a~~la~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|+|.+|.. .+...+.. +++.+.++++++++.+ .++++|...++..      +.+.+.   ...+|+|+-|+.
T Consensus        25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d------~~ell~---~~~iDaV~I~tP   95 (350)
T 4had_A           25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGS------YEEMLA---SDVIDAVYIPLP   95 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESS------HHHHHH---CSSCSEEEECSC
T ss_pred             EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCC------HHHHhc---CCCCCEEEEeCC
Confidence            6899999999975 35555544 6734445666777644 5677888665422      333322   237999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccc---eeeecceEEEeeecCCCCCCCHHHHHHHHHCCCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI---NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  305 (341)
                      .....+.+.+++..  |+-|++.-+-....-.....   .-.+++.+.-..  ..+....++.+-+++++|+|
T Consensus        96 ~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~--~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           96 TSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAY--MITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTT
T ss_pred             CchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEee--eeecCHHHHHhhHhhhcCCC
Confidence            87788889999986  78888874422211111110   011234333222  22222467888899999876

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.07  E-value=0.0083  Score=51.19  Aligned_cols=100  Identities=22%  Similarity=0.271  Sum_probs=68.5

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-e--ecCCCCCChhHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FVNTSEHDRPIQEVIA  220 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~--vv~~~~~~~~~~~~i~  220 (341)
                      +.....+.++.+||-+|+|. |..+..+++..|. .|++++.+++..+.+++    .|.. .  ++..+..+  +     
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~--~-----   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG--Y-----   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT--C-----
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh--C-----
Confidence            34556788999999999875 7788888988887 99999999988777654    3432 1  11111111  0     


Q ss_pred             HHhcCCccEEEec-----c-CChHHHHHHHHHhcCCCcEEEEEc
Q 019414          221 EMTNGGVDRSVEC-----T-GNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       221 ~~~~~~~d~vld~-----~-g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                       ..++.||+|+-.     . .....+..+.+.|+|+ |++++..
T Consensus        99 -~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           99 -VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             -CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             -CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence             013479999842     1 1235688889999998 9988864

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.06  E-value=0.087  Score=44.10  Aligned_cols=114  Identities=16%  Similarity=-0.001  Sum_probs=64.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh-hHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~-~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .|.+|||+|+|.+|...++.+...|+ .|++++.+.. ..+ ++++.+...+ . ......        .-.++|+||-+
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i-~-~~~~~~--------dL~~adLVIaA   98 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVK-R-KKVGEE--------DLLNVFFIVVA   98 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEE-C-SCCCGG--------GSSSCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEE-E-CCCCHh--------HhCCCCEEEEC
Confidence            36789999999999999999999999 7777765432 222 3333233322 1 111100        01369999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEe
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT  282 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~  282 (341)
                      ++.++.-..+... ... |..|..-+......+.++...-...+++.-+
T Consensus        99 T~d~~~N~~I~~~-ak~-gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIS  145 (223)
T 3dfz_A           99 TNDQAVNKFVKQH-IKN-DQLVNMASSFSDGNIQIPAQFSRGRLSLAIS  145 (223)
T ss_dssp             CCCTHHHHHHHHH-SCT-TCEEEC-----CCSEECCEEEEETTEEEEEE
T ss_pred             CCCHHHHHHHHHH-HhC-CCEEEEeCCcccCeEEEeeEEEeCCEEEEEE
Confidence            9886554455544 445 8887776554444444433322235555433

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.05  E-value=0.013  Score=50.87  Aligned_cols=73  Identities=18%  Similarity=0.155  Sum_probs=50.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      ++.+++|+|+|++|.++++.+...|+ +|+++.++.++.+ +.++++....++..+.+     .+.+   +.+|++++++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~~~~---~~~DivVn~t  188 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMD-----ELEG---HEFDLIINAT  188 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSG-----GGTT---CCCSEEEECC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEecHH-----Hhcc---CCCCEEEECC
Confidence            57899999999999999999999996 9999999988864 45555431101111110     1111   4699999999


Q ss_pred             CCh
Q 019414          235 GNI  237 (341)
Q Consensus       235 g~~  237 (341)
                      +..
T Consensus       189 ~~~  191 (271)
T 1nyt_A          189 SSG  191 (271)
T ss_dssp             SCG
T ss_pred             CCC
Confidence            864

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.05  E-value=0.019  Score=49.93  Aligned_cols=79  Identities=27%  Similarity=0.397  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQ-QIIAMVDACVAAFGGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHH-HHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence            4678999986 9999999998888999 899999998876654 4454322   23443322 12222222211  3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.04  E-value=0.009  Score=50.16  Aligned_cols=98  Identities=16%  Similarity=0.187  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC------CEEEEEcCChhhHHHHHHc----C-----CceecCCCCCChhHHH
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGA------SRIIGVDRSSKRFEEAKKF----G-----VTDFVNTSEHDRPIQE  217 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~------~~vv~v~~~~~~~~~~~~~----g-----~~~vv~~~~~~~~~~~  217 (341)
                      .++++++||-+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +     ...+. ....+  ..+
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d--~~~  156 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLL-IVEGD--GRK  156 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEE-EEESC--GGG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceE-EEECC--ccc
Confidence            578999999999875 8888888887652      3899999999887776642    1     11110 01111  111


Q ss_pred             HHHHHhc-CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          218 VIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       218 ~i~~~~~-~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                         .... +.||+|+.........+.+.+.|+++ |++++.-
T Consensus       157 ---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  194 (227)
T 1r18_A          157 ---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPV  194 (227)
T ss_dssp             ---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             ---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEEE
Confidence               1112 47999987765556678899999998 9887754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.04  E-value=0.027  Score=48.05  Aligned_cols=78  Identities=24%  Similarity=0.350  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.    +++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTE-SVQNAVRSVHEQEG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcC
Confidence            3678999987 9999999998888999 89999888776543    22334321   23333321 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999876

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.04  E-value=0.0085  Score=51.20  Aligned_cols=75  Identities=24%  Similarity=0.322  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHHcCCce---ecCCCCCChhHHHHHHHH-hcCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGVTD---FVNTSEHDRPIQEVIAEM-TNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~--~~~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~-~~~~~d  228 (341)
                      .|.++||+|+ +++|++.++.+...|+ +|+.+++++  +..+.+++.|...   ..|..+.+  .   +++. ..+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~--~---v~~~~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPL--A---AKDSFTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT--T---TTTSSTTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH--H---HHHHHHhCCCC
Confidence            4778899986 8999999999999999 888888774  3456677777643   23443332  1   1122 224899


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.03  E-value=0.013  Score=50.11  Aligned_cols=75  Identities=20%  Similarity=0.096  Sum_probs=48.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH---HcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK---KFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~---~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      ++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.   +.+.... ++..+-+ .+.+.+.+.. +++|++|++
T Consensus         3 ~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~-~~~~~~~~~~-g~iD~lv~n   79 (254)
T 1zmt_A            3 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQEPA-ELIEAVTSAY-GQVDVLVSN   79 (254)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHH-HHHHHHHHHH-SCCCEEEEE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHH-HHHHHHHHHh-CCCCEEEEC
Confidence            5889987 9999999999999999 8999988877765443   2343322 2222211 1223333322 379999998


Q ss_pred             cCC
Q 019414          234 TGN  236 (341)
Q Consensus       234 ~g~  236 (341)
                      .|.
T Consensus        80 Ag~   82 (254)
T 1zmt_A           80 DIF   82 (254)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            773

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.03  E-value=0.023  Score=48.94  Aligned_cols=79  Identities=25%  Similarity=0.407  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----H-cCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----K-FGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~-~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    + .+...   ..|..+.+ .+.+.+.+...  
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPD-APAELARRAAEAF   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTT-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHc
Confidence            3678999987 9999999999999999 8999999887765432    1 34322   23544443 12222222222  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998873

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.03  E-value=0.017  Score=49.84  Aligned_cols=78  Identities=22%  Similarity=0.356  Sum_probs=51.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+ .+.+.+.+...  ++
T Consensus         4 ~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            4 DKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRH-SVAAFAQAAVDTWGR   81 (264)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence            568899987 9999999999889999 8999999987765432    334432   23443322 12222222221  37


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus        82 iD~lVnnAG~   91 (264)
T 3tfo_A           82 IDVLVNNAGV   91 (264)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.03  E-value=0.036  Score=46.52  Aligned_cols=74  Identities=15%  Similarity=0.147  Sum_probs=49.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce---ecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~---vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      ++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ ++...   ..|..+.+  -.+.+.+...+.+|+++++
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~--~v~~~~~~~~~~~d~lv~~   79 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQ--EVEQLFEQLDSIPSTVVHS   79 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHH--HHHHHHHSCSSCCSEEEEC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHH--HHHHHHHHHhhcCCEEEEe
Confidence            5899987 9999999999989999 78889999888766544 43221   23333322  2333333333346999998


Q ss_pred             cC
Q 019414          234 TG  235 (341)
Q Consensus       234 ~g  235 (341)
                      .|
T Consensus        80 Ag   81 (230)
T 3guy_A           80 AG   81 (230)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.02  E-value=0.017  Score=50.83  Aligned_cols=78  Identities=29%  Similarity=0.385  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCC---ce---ecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV---TD---FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~---~~---vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+.   ..   ..|..+.+ .+.+.+.+...
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~  102 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEAS-GQDDIINTTLA  102 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHH-HHHHHHHHHHH
Confidence            3578999987 9999999998888999 8999999887755432    2332   11   23433322 12222222211


Q ss_pred             --CCccEEEeccC
Q 019414          225 --GGVDRSVECTG  235 (341)
Q Consensus       225 --~~~d~vld~~g  235 (341)
                        +++|++|++.|
T Consensus       103 ~~g~iD~lvnnAG  115 (297)
T 1xhl_A          103 KFGKIDILVNNAG  115 (297)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              37999999877

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.02  E-value=0.026  Score=48.35  Aligned_cols=77  Identities=22%  Similarity=0.365  Sum_probs=49.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHHH-HHc----CCce-e--cCCCCCChhHHHHHHHHhc--
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEA-KKF----GVTD-F--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~~-~~~----g~~~-v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++ .+.+ +++    +... .  .|..+.+ .+.+.+.+...  
T Consensus         4 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~   81 (260)
T 1x1t_A            4 GKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGE-AVRGLVDNAVRQM   81 (260)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHH-HHHHHHHHHHHhc
Confidence            568899987 9999999999888999 89999888766 4432 222    4322 1  2333321 12222222211  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        82 g~iD~lv~~Ag   92 (260)
T 1x1t_A           82 GRIDILVNNAG   92 (260)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.02  E-value=0.028  Score=48.41  Aligned_cols=79  Identities=22%  Similarity=0.220  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----H-cCCc-e---ecCCCCCCh--hHHHHHHHHh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----K-FGVT-D---FVNTSEHDR--PIQEVIAEMT  223 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~-~g~~-~---vv~~~~~~~--~~~~~i~~~~  223 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    + .+.. .   ..|..+.+.  .+.+.+.+..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            3678999986 9999999999889999 8999999987755432    2 3322 1   134433220  1222222222


Q ss_pred             cCCccEEEeccCC
Q 019414          224 NGGVDRSVECTGN  236 (341)
Q Consensus       224 ~~~~d~vld~~g~  236 (341)
                       +++|+++++.|.
T Consensus        86 -g~id~lvnnAg~   97 (265)
T 3lf2_A           86 -GCASILVNNAGQ   97 (265)
T ss_dssp             -CSCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             379999998873

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.01  E-value=0.027  Score=48.88  Aligned_cols=78  Identities=22%  Similarity=0.322  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+..  -+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP-EIEALVAAVVERYG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHhC
Confidence            3578999987 9999999999888999 899998988775432    2234322   23433322 1222222221  13


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        99 ~iD~lv~~Ag  108 (277)
T 2rhc_B           99 PVDVLVNNAG  108 (277)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999887

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.01  E-value=0.02  Score=48.98  Aligned_cols=79  Identities=23%  Similarity=0.338  Sum_probs=46.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+. .++++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEA-DATAALAFAKQEFGHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence            4678999987 9999999999889999 88888888776554 33444321   13333321 12222222221  3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.01  E-value=0.013  Score=48.95  Aligned_cols=102  Identities=17%  Similarity=0.128  Sum_probs=67.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc---
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  224 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~---  224 (341)
                      ...++.+||-+|+|. |..++.+++.++ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+.....   
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  137 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSP--AKDTLAELIHAGQ  137 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHTTTC
T ss_pred             HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCC--HHHHHHHhhhccC
Confidence            445778999998864 778888888764 3499999999988777665    3543211122222  4333433332   


Q ss_pred             -CCccEEEeccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 -GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 -~~~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                       +.||+|+-....   ...++.+.+.|+|+ |.++.-.
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  174 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDN  174 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence             579999843221   34578889999998 9998754

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.99  E-value=0.015  Score=48.45  Aligned_cols=103  Identities=17%  Similarity=0.106  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhc---
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  224 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~---  224 (341)
                      ...++.+||-+|+| .|..++.+++..+ ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+..   
T Consensus        55 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  131 (223)
T 3duw_A           55 QIQGARNILEIGTL-GGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGL--ALDSLQQIENEKY  131 (223)
T ss_dssp             HHHTCSEEEEECCT-TSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTTC
T ss_pred             HhhCCCEEEEecCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcCC
Confidence            44578899999886 4777888888763 2399999999988777654    4543211122222  3333333322   


Q ss_pred             CCccEEEeccC---ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          225 GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       225 ~~~d~vld~~g---~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +.||+||-...   ....++.+.+.|+|+ |.++.-+.
T Consensus       132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  168 (223)
T 3duw_A          132 EPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV  168 (223)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred             CCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence            46999983322   134688889999998 98877643

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.99  E-value=0.031  Score=49.73  Aligned_cols=87  Identities=17%  Similarity=0.198  Sum_probs=60.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      -+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...-     +  ..+.+     ...|+||-|+..+
T Consensus        32 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~~-----~--~~e~~-----~~aDvVi~~vp~~   98 (320)
T 4dll_A           32 RKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIHE-----Q--ARAAA-----RDADIVVSMLENG   98 (320)
T ss_dssp             SEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEES-----S--HHHHH-----TTCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEeeC-----C--HHHHH-----hcCCEEEEECCCH
Confidence            479999999999999999888998 899999999998888877764221     1  22222     2368888888765


Q ss_pred             HHHHHHH------HHhcCCCcEEEEEc
Q 019414          238 DNMISAF------ECVHDGWGVAVLVG  258 (341)
Q Consensus       238 ~~~~~~~------~~l~~~~g~~v~~g  258 (341)
                      ..+...+      ..+.++ ..++..+
T Consensus        99 ~~~~~v~~~~~~~~~l~~~-~~vi~~s  124 (320)
T 4dll_A           99 AVVQDVLFAQGVAAAMKPG-SLFLDMA  124 (320)
T ss_dssp             HHHHHHHTTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHcchhHHhhCCCC-CEEEecC
Confidence            4444443      244554 5555554

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.99  E-value=0.018  Score=50.00  Aligned_cols=79  Identities=25%  Similarity=0.356  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+. +++...   ..|..+.+ .+.+.+.+...  +++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGE-RIDVVAADVLARYGRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHH-HHHHHHHHHHHHHSCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHH-HHHHHHHHHHHhCCCCC
Confidence            3568999987 9999999999889999 8999989888766543 444321   13333322 12222222211  3699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99998873

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=95.99  E-value=0.037  Score=47.07  Aligned_cols=79  Identities=24%  Similarity=0.263  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+.  .+.+.+.+.. +
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-G   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            4678999987 9999999999999999 8999999988765433    234322   233333210  1222222222 3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999998864

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.97  E-value=0.016  Score=50.24  Aligned_cols=104  Identities=15%  Similarity=0.168  Sum_probs=68.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHc-----CCceecCCCCCChhHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAE  221 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~-----g~~~vv~~~~~~~~~~~~i~~  221 (341)
                      +.....++++++||-+|+| .|..+..+++.. ...+|++++.+++..+.+++.     |.+.+- ....+  +.+   .
T Consensus       102 ~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~-~~~~d--~~~---~  174 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVR-TSRSD--IAD---F  174 (275)
T ss_dssp             ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEE-EECSC--TTT---C
T ss_pred             HHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEE-EEECc--hhc---c
Confidence            3455678899999999987 477788888874 233999999999988877653     533221 11111  111   1


Q ss_pred             HhcCCccEEEeccCCh-HHHHHHHHHhcCCCcEEEEEcc
Q 019414          222 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       222 ~~~~~~d~vld~~g~~-~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..++.||+|+-....+ ..++.+.+.|+++ |+++....
T Consensus       175 ~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          175 ISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             CcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            1223799998654433 5788999999998 99888763

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.96  E-value=0.061  Score=47.65  Aligned_cols=91  Identities=15%  Similarity=0.167  Sum_probs=62.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~-~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+|.|+|.|.+|.+.++.++..|.. .|++.++++++.+.+++.|+. .....  ..        +..-...|+||.|+.
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~--~~--------~~~~~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS--IA--------KVEDFSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC--TT--------GGGGGCCSEEEECSC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCC--HH--------HHhhccCCEEEEeCC
Confidence            5799999999999999999988864 799999999999999888863 22111  10        000024799999886


Q ss_pred             ChH---HHHHHHHHhcCCCcEEEEEcc
Q 019414          236 NID---NMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~---~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ...   .++++...++++ ..++.++.
T Consensus       104 ~~~~~~vl~~l~~~l~~~-~iv~d~~S  129 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSED-ATVTDQGS  129 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred             HHHHHHHHHHHhhccCCC-cEEEECCC
Confidence            532   334444556665 66666553

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.96  E-value=0.046  Score=47.35  Aligned_cols=78  Identities=19%  Similarity=0.259  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HH----cCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KK----FGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~----~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.. ++    .+...   ..|..+.+ .+.+.+.+...  
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPP-AVMAAVDQALKEF  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999998888999 899998988765432 22    24322   23443322 12222222222  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|+++++.|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            37999999987

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.96  E-value=0.032  Score=48.42  Aligned_cols=70  Identities=17%  Similarity=0.169  Sum_probs=50.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC--ceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV--TDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~--~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .+.+++|+|+|++|.+++..+...|+.+|+.+.++.++.+. +++++.  ..++..++    +       ....+|+||+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~----l-------~~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA----L-------EGQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG----G-------TTCCCSEEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH----h-------cccCCCEEEE
Confidence            57899999999999999988888998789999999888654 455553  12222211    1       1146999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      |++.
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            9865

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.95  E-value=0.024  Score=48.59  Aligned_cols=78  Identities=21%  Similarity=0.300  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE-DRERLVAMAVNLHG   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999998888999 899998988765432    2234322   23333321 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        91 ~iD~lv~~Ag  100 (260)
T 2zat_A           91 GVDILVSNAA  100 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999877

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=95.95  E-value=0.034  Score=47.43  Aligned_cols=80  Identities=15%  Similarity=0.203  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHHc--CCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKF--GVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~--~~~~~~~~~--g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|++.|+.+++++  +..+.+++.  +...   ..|..+....+.+.+.+...  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            3578999986 99999999998889995477777765  333334333  2211   23444330123333332222  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        84 ~id~lv~~Ag   93 (254)
T 1sby_A           84 TVDILINGAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999987

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.95  E-value=0.052  Score=48.54  Aligned_cols=87  Identities=18%  Similarity=0.293  Sum_probs=62.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +..+++|+..    .  +  +.+.+.+     .|+|+.++.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~--~--l~~~l~~-----aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF----K--P--LEDLLRE-----SDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE----C--C--HHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc----C--C--HHHHHhh-----CCEEEECCC
Confidence            56789999999999999999999998 89999988877 6666666531    1  1  4333332     789988876


Q ss_pred             ChH----HH-HHHHHHhcCCCcEEEEEc
Q 019414          236 NID----NM-ISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~~----~~-~~~~~~l~~~~g~~v~~g  258 (341)
                      ...    .+ ...+..++++ ..++.++
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~-ailIn~s  240 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKT-AILINIA  240 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            432    22 3556778886 7777665

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.95  E-value=0.03  Score=48.42  Aligned_cols=79  Identities=20%  Similarity=0.300  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc---C---Cce---ecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---G---VTD---FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~---g---~~~---vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++   .   ...   ..|..+.+ .+.+.+.+...
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~   82 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDA-GQDEILSTTLG   82 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHH-HHHHHHHHHHH
Confidence            3567899987 9999999988888999 8999989887765432 23   2   111   13433321 12222222211


Q ss_pred             --CCccEEEeccCC
Q 019414          225 --GGVDRSVECTGN  236 (341)
Q Consensus       225 --~~~d~vld~~g~  236 (341)
                        +++|++|++.|.
T Consensus        83 ~~g~id~lv~~Ag~   96 (278)
T 1spx_A           83 KFGKLDILVNNAGA   96 (278)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HcCCCCEEEECCCC
Confidence              379999998873

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.95  E-value=0.02  Score=49.80  Aligned_cols=96  Identities=14%  Similarity=0.102  Sum_probs=60.6

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|||+|+ |.+|...++.+... |. +|+++.++.++...+...++..+ .|..+.     +.+.+.. .++|+||++.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~-----~~l~~~~-~~~d~vi~~a~   74 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYFNQ-----ESMVEAF-KGMDTVVFIPS   74 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTTCH-----HHHHHHT-TTCSEEEECCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCCCH-----HHHHHHH-hCCCEEEEeCC
Confidence            4899997 99999998888777 87 78888888877554444444332 344332     2333333 36999999987


Q ss_pred             Ch-------HHHHHHHHHhcCC-CcEEEEEccCC
Q 019414          236 NI-------DNMISAFECVHDG-WGVAVLVGVPS  261 (341)
Q Consensus       236 ~~-------~~~~~~~~~l~~~-~g~~v~~g~~~  261 (341)
                      ..       .....+++.+... .++++.++...
T Consensus        75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            42       1223444444433 15788887654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=95.94  E-value=0.038  Score=47.88  Aligned_cols=77  Identities=27%  Similarity=0.205  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+.  .+.+.+.+.  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--C
Confidence            4678999986 9999999999989999 888888887664432    2334322   234444331  133333333  5


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|+++++.|
T Consensus       109 ~iD~lvnnAg  118 (275)
T 4imr_A          109 PVDILVINAS  118 (275)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=95.94  E-value=0.025  Score=48.53  Aligned_cols=80  Identities=23%  Similarity=0.265  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCC--hhHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHD--RPIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~--~~~~~~i~~~~~~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+  ..+.+.+.+..++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3578999987 9999999998888999 899998988765432    2234322   12333221  0122222233325


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999998873

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.93  E-value=0.022  Score=53.33  Aligned_cols=92  Identities=24%  Similarity=0.324  Sum_probs=67.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -.|.+|+|+|.|.+|..+++.++.+|+ +|++++++..+.......|.. +.     +  +.+.+     ...|+|+-+.
T Consensus       255 l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~~-----~--l~ell-----~~aDiVi~~~  320 (479)
T 1v8b_A          255 ISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV-----T--LDEIV-----DKGDFFITCT  320 (479)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC-----C--HHHHT-----TTCSEEEECC
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-ec-----C--HHHHH-----hcCCEEEECC
Confidence            478899999999999999999999999 999999998875445555653 21     1  33222     2489999887


Q ss_pred             CChHHH-HHHHHHhcCCCcEEEEEccCC
Q 019414          235 GNIDNM-ISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       235 g~~~~~-~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +....+ ...++.++++ ..++.++...
T Consensus       321 ~t~~lI~~~~l~~MK~g-ailiNvgrg~  347 (479)
T 1v8b_A          321 GNVDVIKLEHLLKMKNN-AVVGNIGHFD  347 (479)
T ss_dssp             SSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred             ChhhhcCHHHHhhcCCC-cEEEEeCCCC
Confidence            654444 3566778887 8888887543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=95.92  E-value=0.02  Score=49.90  Aligned_cols=75  Identities=20%  Similarity=0.281  Sum_probs=48.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce----ecCCCCCChhHHHHHHHHh--cC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD----FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~----vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...    ..|..+.+ .+.+.+.+..  .+
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT-FAEQFVAQAGKLMG  105 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHH-HHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHH-HHHHHHHHHHHHcC
Confidence            678999987 9999999998888999 8999999988765432    334322    13333321 1222222221  13


Q ss_pred             CccEEEec
Q 019414          226 GVDRSVEC  233 (341)
Q Consensus       226 ~~d~vld~  233 (341)
                      ++|++|++
T Consensus       106 ~iD~li~n  113 (286)
T 1xu9_A          106 GLDMLILN  113 (286)
T ss_dssp             SCSEEEEC
T ss_pred             CCCEEEEC
Confidence            79999987

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.92  E-value=0.05  Score=48.16  Aligned_cols=75  Identities=17%  Similarity=0.221  Sum_probs=49.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC---hhhHHHH-HHc----CCc-eecCCCCCChhHHHHHHHHhcCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---SKRFEEA-KKF----GVT-DFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~---~~~~~~~-~~~----g~~-~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      .+.++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+ +++    +.. .+++.++    + +.+.+.. ..
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~----~-~~l~~~l-~~  226 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED----H-EQLRKEI-AE  226 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC----H-HHHHHHH-HT
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch----H-HHHHhhh-cC
Confidence            57899999999999999999999999888888898   6554433 232    221 2233322    1 1121111 14


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+||+|++.
T Consensus       227 aDiIINaTp~  236 (315)
T 3tnl_A          227 SVIFTNATGV  236 (315)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECccC
Confidence            8999998753

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.92  E-value=0.0061  Score=51.23  Aligned_cols=101  Identities=21%  Similarity=0.227  Sum_probs=68.1

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc----eecCCCCCChhHHHHHHHHh
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.....+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++....    .++..   +  ..+..  ..
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~---d--~~~~~--~~  131 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILG---D--GTLGY--EE  131 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEES---C--GGGCC--GG
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEEC---C--ccccc--cc
Confidence            34556788999999999875 77888888764 4 999999999998888764211    11111   1  11100  01


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .+.||+|+....-....+.+.+.|+++ |+++..-.
T Consensus       132 ~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          132 EKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CCCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            247999986554434456788999998 98887753

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=95.92  E-value=0.032  Score=47.68  Aligned_cols=77  Identities=21%  Similarity=0.218  Sum_probs=49.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHh--cCC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+..  -++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRD-QVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH-HHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHhCC
Confidence            457899987 9999999999988999 899998988765533    2234321   23443321 1222222221  137


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|++|++.|
T Consensus        80 id~lv~nAg   88 (256)
T 1geg_A           80 FDVIVNNAG   88 (256)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999886

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.91  E-value=0.049  Score=49.97  Aligned_cols=112  Identities=13%  Similarity=0.100  Sum_probs=71.5

Q ss_pred             hhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-----------cCC--cee--c
Q 019414          142 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----------FGV--TDF--V  206 (341)
Q Consensus       142 ~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-----------~g~--~~v--v  206 (341)
                      ...+..++....++++++||=+|+|. |.+++++|+..|..+|++++.+++..+.+++           +|.  ..+  +
T Consensus       159 ~~~i~~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi  237 (438)
T 3uwp_A          159 FDLVAQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLE  237 (438)
T ss_dssp             HHHHHHHHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEE
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEE
Confidence            34445566778899999999898863 7788888988898679999999866555443           343  222  2


Q ss_pred             CCCCCChhHHHHHHHHhcCCccEEEe-cc-CC---hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          207 NTSEHDRPIQEVIAEMTNGGVDRSVE-CT-GN---IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       207 ~~~~~~~~~~~~i~~~~~~~~d~vld-~~-g~---~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      .-+-.+.++...    . ..+|+|+- +. -.   ...+...++.|+|| |+++.+...
T Consensus       238 ~GD~~~lp~~d~----~-~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f  290 (438)
T 3uwp_A          238 RGDFLSEEWRER----I-ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPF  290 (438)
T ss_dssp             ECCTTSHHHHHH----H-HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCS
T ss_pred             ECcccCCccccc----c-CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeecc
Confidence            111112112111    1 24899883 21 11   23566778889998 999988643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=95.91  E-value=0.033  Score=48.45  Aligned_cols=78  Identities=21%  Similarity=0.301  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc---CCce-e--cCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---GVTD-F--VNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~---g~~~-v--v~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++   +... .  .|..+.+ .+.+.+.+...  +
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g   84 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEA-LHEALVELAVRRFG   84 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            4678999987 9999999998889999 8999999988765543 33   3222 1  2332221 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        85 ~iD~lvnnAg   94 (280)
T 3tox_A           85 GLDTAFNNAG   94 (280)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=95.91  E-value=0.027  Score=48.28  Aligned_cols=78  Identities=28%  Similarity=0.286  Sum_probs=49.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+.    +.+...   ..|..+.+ .+.+.+.+...  
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPA-KIKEMFQQIDETF   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999999999999 66665 78877655432    234332   12333322 12222222211  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        81 g~id~lv~nAg   91 (258)
T 3oid_A           81 GRLDVFVNNAA   91 (258)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999886

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=95.90  E-value=0.029  Score=47.92  Aligned_cols=77  Identities=29%  Similarity=0.377  Sum_probs=48.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCce-e--cCCCCCChhHHHHHHHHhc--CCcc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++  .+.+++.+... .  .|..+.+ .+.+.+.+...  +++|
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            4 GKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVA-QIEALFALAEREFGGVD   81 (255)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHH-HHHHHHHHHHHHHSSCS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHH-HHHHHHHHHHHHcCCCC
Confidence            568999987 9999999998888999 88888887652  12233334322 1  2333221 12222222211  3799


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      ++|++.|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999887

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.90  E-value=0.02  Score=47.83  Aligned_cols=100  Identities=16%  Similarity=0.143  Sum_probs=66.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHc----C-----CceecCCCCCChhHHHHHHHH
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----G-----VTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~----g-----~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      .++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++.    +     .+.+ .....+  ....  ..
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v-~~~~~d--~~~~--~~  147 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRV-QLVVGD--GRMG--YA  147 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSE-EEEESC--GGGC--CG
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcE-EEEECC--cccC--cc
Confidence            378899999999875 7888888888763 2999999999888776542    2     1111 011111  1000  01


Q ss_pred             hcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+.||+|+........++.+.+.|+|+ |+++..-.
T Consensus       148 ~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  183 (226)
T 1i1n_A          148 EEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPVG  183 (226)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             cCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEe
Confidence            1247999986655556678899999998 98887643

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.89  E-value=0.02  Score=49.99  Aligned_cols=96  Identities=19%  Similarity=0.206  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC-----C---------ceecCCCCCChhHHHHHH
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----V---------TDFVNTSEHDRPIQEVIA  220 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g-----~---------~~vv~~~~~~~~~~~~i~  220 (341)
                      .++.+||++|+|. |..+..+++. +..+|++++.+++..+.+++.-     .         ..+ .....+  ..+.+.
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v-~~~~~D--~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKA-KLTIGD--GFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSE-EEEESC--HHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcE-EEEECc--hHHHhc
Confidence            3568999998754 5666677777 7669999999999998887632     1         111 111112  333333


Q ss_pred             HHhcCCccEEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          221 EMTNGGVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       221 ~~~~~~~d~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .  ++.||+|+ |...         ..+.++.+.+.|+|+ |.++...
T Consensus       149 ~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  193 (281)
T 1mjf_A          149 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  193 (281)
T ss_dssp             H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             c--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            3  45899987 4431         245688899999998 9888763

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.88  E-value=0.065  Score=46.44  Aligned_cols=79  Identities=23%  Similarity=0.353  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-------------ChhhHHHH----HHcCCce---ecCCCCCChh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-------------SSKRFEEA----KKFGVTD---FVNTSEHDRP  214 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-------------~~~~~~~~----~~~g~~~---vv~~~~~~~~  214 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++             ++++.+.+    ++.+...   ..|..+.+ .
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~   91 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA-A   91 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-H
Confidence            4678999987 9999999999989999 8888876             45554432    2334322   23443322 1


Q ss_pred             HHHHHHHHhc--CCccEEEeccCC
Q 019414          215 IQEVIAEMTN--GGVDRSVECTGN  236 (341)
Q Consensus       215 ~~~~i~~~~~--~~~d~vld~~g~  236 (341)
                      +.+.+.+...  +++|+++++.|.
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            2222222211  379999998873

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=95.86  E-value=0.041  Score=47.60  Aligned_cols=79  Identities=20%  Similarity=0.278  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHHH----HHHcCCce---ecCCCCCChhH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEE----AKKFGVTD---FVNTSEHDRPI  215 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~------------~~~~~~----~~~~g~~~---vv~~~~~~~~~  215 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++            .++.+.    +++.+...   ..|..+.+ .+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v   89 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE-SL   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH-HH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HH
Confidence            4678999987 9999999998889999 88888876            444332    23344432   12333322 12


Q ss_pred             HHHHHHHhc--CCccEEEeccCC
Q 019414          216 QEVIAEMTN--GGVDRSVECTGN  236 (341)
Q Consensus       216 ~~~i~~~~~--~~~d~vld~~g~  236 (341)
                      .+.+.+...  +++|++|++.|.
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            222222221  379999998873

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.86  E-value=0.03  Score=46.22  Aligned_cols=98  Identities=18%  Similarity=0.176  Sum_probs=68.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee--cCCCCCChhHHHHHHHHhcCCccE
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v--v~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      ..+.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.+...+  +..+-.+  +      ...+.+|+
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~--~------~~~~~~D~  110 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFD--W------TPDRQWDA  110 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTS--C------CCSSCEEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccccc--C------CCCCceeE
Confidence            3477888999999864 6777777777 77 99999999999999988663322  1111111  1      12347999


Q ss_pred             EEeccC-----C---hHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          230 SVECTG-----N---IDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       230 vld~~g-----~---~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      |+-...     .   ...++.+.+.|+|+ |++++.....
T Consensus       111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~~  149 (218)
T 3ou2_A          111 VFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVTD  149 (218)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEECC
T ss_pred             EEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCCC
Confidence            985322     1   34678889999998 9998886543

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.86  E-value=0.045  Score=47.43  Aligned_cols=91  Identities=20%  Similarity=0.175  Sum_probs=59.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      ...+.+++|+|+|+.|.+++.-+...|+++|+++.|+.+|.+ ++++++.+.. +  +    ..       ...+|+||+
T Consensus       116 ~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~-~--~----~~-------~~~~DivIn  181 (271)
T 1npy_A          116 LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-N--S----LE-------NQQADILVN  181 (271)
T ss_dssp             CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-S--C----CT-------TCCCSEEEE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccc-h--h----hh-------cccCCEEEE
Confidence            345678999999999999998888999878999999987744 5556664211 0  0    00       125899999


Q ss_pred             ccCChHH-------HHHHHHHhcCCCcEEEEEcc
Q 019414          233 CTGNIDN-------MISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       233 ~~g~~~~-------~~~~~~~l~~~~g~~v~~g~  259 (341)
                      |++....       .......+.++ ..++.+-.
T Consensus       182 aTp~gm~~~~~~~~~~~~~~~l~~~-~~v~DlvY  214 (271)
T 1npy_A          182 VTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVVA  214 (271)
T ss_dssp             CSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECCC
T ss_pred             CCCCCccCccccCCCCCCHHHcCCC-CEEEEeec
Confidence            9875321       11112445555 66666654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=95.85  E-value=0.042  Score=47.30  Aligned_cols=77  Identities=18%  Similarity=0.164  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcC--Cce---ecCCCCCChhHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFG--VTD---FVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g--~~~---vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+    ++.+  ...   ..|..+.  +..+.+.+.. +
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~-g   84 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE--QGCQDVIEKY-P   84 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH--HHHHHHHHHC-C
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH--HHHHHHHHhc-C
Confidence            4678999986 9999999998888999 899999988765432    2222  211   1233322  2333333322 4


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        85 ~id~lv~nAg~   95 (267)
T 3t4x_A           85 KVDILINNLGI   95 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.84  E-value=0.016  Score=49.18  Aligned_cols=75  Identities=12%  Similarity=0.038  Sum_probs=49.8

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-c--CChhhHHHH-HHc-CCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-D--RSSKRFEEA-KKF-GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~--~~~~~~~~~-~~~-g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+ +  +++++.+.+ +++ +. .+.+..+-+ .+.+.+.+.. +++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~-~~~~~~~~~~-g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQKPE-RLVDATLQHG-EAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGG-GHHHHHGGGS-SCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHH-HHHHHHHHHc-CCCCEE
Confidence            357899987 9999999999988999 88888 6  888776554 344 32 233333321 2333333322 379999


Q ss_pred             EeccC
Q 019414          231 VECTG  235 (341)
Q Consensus       231 ld~~g  235 (341)
                      |++.|
T Consensus        77 v~~Ag   81 (244)
T 1zmo_A           77 VSNDY   81 (244)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=95.83  E-value=0.03  Score=49.07  Aligned_cols=78  Identities=21%  Similarity=0.288  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc---CCce----ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTD----FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~----vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ +++   +...    ..|..+.+ .+.+.+.+...  
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG-SCADAARTVVDAF  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999999989999 899998988775543 333   3111    23443322 12222222221  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus       118 g~iD~lvnnAg  128 (293)
T 3rih_A          118 GALDVVCANAG  128 (293)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=95.82  E-value=0.027  Score=50.72  Aligned_cols=79  Identities=24%  Similarity=0.361  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-----------HHHHHHcCCce---ecCCCCCChhHHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTD---FVNTSEHDRPIQEVIA  220 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-----------~~~~~~~g~~~---vv~~~~~~~~~~~~i~  220 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++           .+.+++.|...   ..|..+.+ .+.+.+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~-~v~~~~~  121 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQ-QISAAVE  121 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHH
Confidence            4688999987 9999999988888899 88888887763           23344555432   23444322 1222222


Q ss_pred             HHhc--CCccEEEeccCC
Q 019414          221 EMTN--GGVDRSVECTGN  236 (341)
Q Consensus       221 ~~~~--~~~d~vld~~g~  236 (341)
                      +...  +++|++|++.|.
T Consensus       122 ~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            2222  379999998873

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.82  E-value=0.017  Score=49.63  Aligned_cols=79  Identities=14%  Similarity=0.184  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC---CCEEEEEcCChhhHHHHHHc---CCce---ecCCCCCCh--hHHHHHHHHh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAG---ASRIIGVDRSSKRFEEAKKF---GVTD---FVNTSEHDR--PIQEVIAEMT  223 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g---~~~vv~v~~~~~~~~~~~~~---g~~~---vv~~~~~~~--~~~~~i~~~~  223 (341)
                      .+.++||+|+ |++|.+.++.+...|   + +|+.++++.++.+.++++   +...   ..|..+.+.  .+.+.+.+..
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            4568999987 999999999888888   7 899998887654444332   3221   234433321  1233333333


Q ss_pred             cC-CccEEEeccC
Q 019414          224 NG-GVDRSVECTG  235 (341)
Q Consensus       224 ~~-~~d~vld~~g  235 (341)
                      +. ++|++|++.|
T Consensus        99 g~~~id~li~~Ag  111 (267)
T 1sny_A           99 KDQGLNVLFNNAG  111 (267)
T ss_dssp             GGGCCSEEEECCC
T ss_pred             CCCCccEEEECCC
Confidence            33 6999999887

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=95.81  E-value=0.032  Score=47.89  Aligned_cols=79  Identities=19%  Similarity=0.211  Sum_probs=49.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHH-cCCCEEEEEcCChhhHHHH----HHcCCc-e--ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSKRFEEA----KKFGVT-D--FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~-~g~~~vv~v~~~~~~~~~~----~~~g~~-~--vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      ++.++||+|+ |++|.+.++.+.. .|+ +|+.++++.++.+.+    ++.+.. .  ..|..+.+ .+.+.+.+...  
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQ-SIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHH-HHHHHHHHHHHhc
Confidence            4678999987 9999998888777 899 888888887665432    223432 1  23333321 12222222211  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus        81 g~id~li~~Ag~   92 (276)
T 1wma_A           81 GGLDVLVNNAGI   92 (276)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            369999998873

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.81  E-value=0.046  Score=48.24  Aligned_cols=101  Identities=17%  Similarity=0.150  Sum_probs=68.9

Q ss_pred             hhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc---eecCCCCCChhHHHHHH
Q 019414          149 LNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIA  220 (341)
Q Consensus       149 ~~~~~-~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~i~  220 (341)
                      ..... ++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++    .|..   .++..+-.+  +     
T Consensus       109 ~~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~-----  179 (312)
T 3vc1_A          109 MDHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD--T-----  179 (312)
T ss_dssp             HTTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc--C-----
Confidence            34444 78999999999864 7778888887787 99999999998877665    3432   111111111  0     


Q ss_pred             HHhcCCccEEEec-----cCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          221 EMTNGGVDRSVEC-----TGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       221 ~~~~~~~d~vld~-----~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ...++.||+|+..     ..-...++.+.+.|+|+ |++++...
T Consensus       180 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          180 PFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            0122479999753     22246788999999998 99988764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=95.80  E-value=0.049  Score=47.24  Aligned_cols=78  Identities=22%  Similarity=0.288  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHH----HHHHcCCce---ecCCCCCCh--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFE----EAKKFGVTD---FVNTSEHDR--  213 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~------------~~~~~----~~~~~g~~~---vv~~~~~~~--  213 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.++++            .++.+    .+++.+...   ..|..+.+.  
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4678999986 9999999999999999 88888886            33322    233445432   124333220  


Q ss_pred             hHHHHHHHHhcCCccEEEeccC
Q 019414          214 PIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       214 ~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+.+.+.+.. +++|+++++.|
T Consensus        88 ~~~~~~~~~~-g~id~lv~nAg  108 (281)
T 3s55_A           88 SFVAEAEDTL-GGIDIAITNAG  108 (281)
T ss_dssp             HHHHHHHHHH-TCCCEEEECCC
T ss_pred             HHHHHHHHhc-CCCCEEEECCC
Confidence            1222222222 37999999887

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.80  E-value=0.029  Score=47.49  Aligned_cols=102  Identities=18%  Similarity=0.163  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh----
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT----  223 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~----  223 (341)
                      ...++.+||-+|+| .|..++.+++.+. ..+|++++.+++..+.+++    .|...-+.....+  ..+.+..+.    
T Consensus        67 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~~  143 (237)
T 3c3y_A           67 KLVNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD--AMLALDNLLQGQE  143 (237)
T ss_dssp             HHTTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSTT
T ss_pred             HhhCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhccC
Confidence            34567899999876 3677788888763 2499999999998877654    4543212222222  333333332    


Q ss_pred             -cCCccEEEeccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          224 -NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 -~~~~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                       .+.||+||-....   ...++.+.+.|+|+ |.++.-.
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~  181 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN  181 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence             3479999843222   34678889999997 9887754

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.78  E-value=0.037  Score=47.01  Aligned_cols=79  Identities=24%  Similarity=0.404  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce----ecCCCCCChhHHHHHHHHh-cCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD----FVNTSEHDRPIQEVIAEMT-NGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~----vv~~~~~~~~~~~~i~~~~-~~~~d  228 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...    ..|..+.+ .+.+.+.+.. .+++|
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~id   87 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAE-AMTAAAAEAEAVAPVS   87 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHH-HHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHH-HHHHHHHHHHhhCCCc
Confidence            4678999987 9999999998888999 899999988776543 3344321    13433321 1222222211 24799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus        88 ~li~~Ag~   95 (254)
T 2wsb_A           88 ILVNSAGI   95 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998873

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.78  E-value=0.03  Score=47.55  Aligned_cols=78  Identities=22%  Similarity=0.318  Sum_probs=49.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++ ++++.+.+    ++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus         4 ~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            4 GKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAE-DVTNMVKQTVDVFG   81 (246)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence            568899987 9999999999888999 8888877 66664432    2334322   23433322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 2uvd_A           82 QVDILVNNAGV   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=95.78  E-value=0.049  Score=47.79  Aligned_cols=78  Identities=19%  Similarity=0.285  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHH----HHHHcCCce---ecCCCCCChhH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFE----EAKKFGVTD---FVNTSEHDRPI  215 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~------------~~~~~----~~~~~g~~~---vv~~~~~~~~~  215 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++            .++.+    .+++.+...   ..|..+.+ .+
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v  104 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD-AM  104 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HH
Confidence            4678999987 9999999998889999 88888776            34333    233445432   23443322 12


Q ss_pred             HHHHHHHhc--CCccEEEeccC
Q 019414          216 QEVIAEMTN--GGVDRSVECTG  235 (341)
Q Consensus       216 ~~~i~~~~~--~~~d~vld~~g  235 (341)
                      .+.+.+...  +++|++|++.|
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHhCCCCEEEECCC
Confidence            222222221  37999999877

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.78  E-value=0.019  Score=51.96  Aligned_cols=48  Identities=25%  Similarity=0.338  Sum_probs=41.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHHcCCc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVT  203 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~  203 (341)
                      -.|.+|+|+|.|.+|..+++.+..+|+ +|++.+++.++.+ +.++++++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            478999999999999999999999999 7889999988766 45556764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=95.78  E-value=0.065  Score=46.18  Aligned_cols=79  Identities=22%  Similarity=0.252  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.+    ++.+...   ..|..+.+ .+.+.+.+...  
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~  103 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPA-AVRRLFATAEEAF  103 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999988888899 66665 5555554432    3344432   23443322 12222222221  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus       104 g~iD~lvnnAG~  115 (267)
T 3u5t_A          104 GGVDVLVNNAGI  115 (267)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=95.77  E-value=0.049  Score=46.75  Aligned_cols=78  Identities=23%  Similarity=0.458  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-C-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H---cCCce----ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVTD----FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~~~----vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .+.++||+|+ | ++|.+.++.+...|+ +|+.+++++++.+.+. +   .+...    ..|..+.+ .+.+.+.+... 
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~   98 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTE-AVDALITQTVEK   98 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHH-HHHHHHHHHHHH
Confidence            4678999987 6 799999998888999 8999999887755432 2   22211    23433322 12222222211 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|++|++.|
T Consensus        99 ~g~id~li~~Ag  110 (266)
T 3o38_A           99 AGRLDVLVNNAG  110 (266)
T ss_dssp             HSCCCEEEECCC
T ss_pred             hCCCcEEEECCC
Confidence             37999999887

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.77  E-value=0.04  Score=48.31  Aligned_cols=78  Identities=17%  Similarity=0.268  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc--------CCce---ecCCCCCChhHHHHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF--------GVTD---FVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~--------g~~~---vv~~~~~~~~~~~~i~~~  222 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+. ++        +...   ..|..+.+ .+.+.+.+.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~   94 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEE-EVNNLVKST   94 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH-HHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHH-HHHHHHHHH
Confidence            3578999987 9999999998888999 8999989887655332 21        2221   13333321 122222222


Q ss_pred             hc--CCccEEEeccC
Q 019414          223 TN--GGVDRSVECTG  235 (341)
Q Consensus       223 ~~--~~~d~vld~~g  235 (341)
                      ..  +++|++|++.|
T Consensus        95 ~~~~g~id~li~~Ag  109 (303)
T 1yxm_A           95 LDTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            11  36999999887

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=95.76  E-value=0.048  Score=46.90  Aligned_cols=72  Identities=19%  Similarity=0.251  Sum_probs=46.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEEe
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vld  232 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++     ...+.. ..|..+.+ .+.+.+.+...  +++|++|+
T Consensus         8 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            8 DKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTNPD-QVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTCHH-HHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence            578999987 9999999999989999 88888887665     111211 23433321 12222222221  36999999


Q ss_pred             ccC
Q 019414          233 CTG  235 (341)
Q Consensus       233 ~~g  235 (341)
                      +.|
T Consensus        81 ~Ag   83 (264)
T 2dtx_A           81 NAG   83 (264)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            887

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=95.75  E-value=0.05  Score=47.68  Aligned_cols=79  Identities=15%  Similarity=0.241  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCcee--cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++    +.+....  .|..+.+ .+.+.+.+...  
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAE-SVDNMFKVLAEEW  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 5  999999988888999 8999988876544433    3343222  3433322 12222222221  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998873

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.74  E-value=0.047  Score=43.11  Aligned_cols=101  Identities=20%  Similarity=0.184  Sum_probs=63.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhc-CCccEE
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGVDRS  230 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~-~~~d~v  230 (341)
                      .++++++||-+|+|. |..+..+++..|. .++++++.++ ..+.   ... .++..+-.+....+.+..... +.+|+|
T Consensus        19 ~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---~~~-~~~~~d~~~~~~~~~~~~~~~~~~~D~i   92 (180)
T 1ej0_A           19 LFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI---VGV-DFLQGDFRDELVMKALLERVGDSKVQVV   92 (180)
T ss_dssp             CCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC---TTE-EEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc---CcE-EEEEcccccchhhhhhhccCCCCceeEE
Confidence            367899999999876 7788888888642 3999999887 3322   111 122122222112223333233 489999


Q ss_pred             Ee-----ccCC------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          231 VE-----CTGN------------IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       231 ld-----~~g~------------~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +.     ..+.            ...++.+.+.|+++ |.++.....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  138 (180)
T 1ej0_A           93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVFQ  138 (180)
T ss_dssp             EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            86     2222            25678888999998 999876543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.73  E-value=0.026  Score=48.00  Aligned_cols=79  Identities=18%  Similarity=0.234  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+..  .+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence            3578999987 9999999998888898 899998988765432    2234322   12333321 1222222221  13


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.73  E-value=0.083  Score=48.60  Aligned_cols=94  Identities=16%  Similarity=0.190  Sum_probs=60.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCC--CEEEEEcCChhhHHHH-HHcC------Cce-ecCCCCCChhHHHHHHHHhcCCcc
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGA--SRIIGVDRSSKRFEEA-KKFG------VTD-FVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~--~~vv~v~~~~~~~~~~-~~~g------~~~-vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      +|+|+|+|.+|..+++.+...|.  ..|++++++.++.+.+ ++++      +.. .+|..+.+ .+.+.+.+.   ++|
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~-~l~~~l~~~---~~D   78 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIE-ELVALINEV---KPQ   78 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHH-HHHHHHHHH---CCS
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHH-HHHHHHHhh---CCC
Confidence            68999999999999988877773  3888888998886654 3332      221 23333211 122222222   689


Q ss_pred             EEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          229 RSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       229 ~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      +||++++.......+..++..+ -.++.+
T Consensus        79 vVin~ag~~~~~~v~~a~l~~g-~~vvD~  106 (405)
T 4ina_A           79 IVLNIALPYQDLTIMEACLRTG-VPYLDT  106 (405)
T ss_dssp             EEEECSCGGGHHHHHHHHHHHT-CCEEES
T ss_pred             EEEECCCcccChHHHHHHHHhC-CCEEEe
Confidence            9999998655555566667665 566654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.72  E-value=0.034  Score=47.13  Aligned_cols=77  Identities=23%  Similarity=0.310  Sum_probs=49.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc----CCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+. ++    +...   ..|..+.+ .+.+.+.+...  +
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEG-DVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHhC
Confidence            467899987 9999999998888998 8999989887765432 22    2211   12333321 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        80 ~id~li~~Ag   89 (250)
T 2cfc_A           80 AIDVLVNNAG   89 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999876

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=95.72  E-value=0.053  Score=47.04  Aligned_cols=79  Identities=27%  Similarity=0.280  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHHH----HHHcCCce---ecCCCCCChhH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEE----AKKFGVTD---FVNTSEHDRPI  215 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~------------~~~~~~----~~~~g~~~---vv~~~~~~~~~  215 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++            .++.+.    ++..+...   ..|..+.+ .+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v   86 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA-AV   86 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH-HH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH-HH
Confidence            4678999987 9999999999999999 88888776            443332    23344322   23443322 12


Q ss_pred             HHHHHHHhc--CCccEEEeccCC
Q 019414          216 QEVIAEMTN--GGVDRSVECTGN  236 (341)
Q Consensus       216 ~~~i~~~~~--~~~d~vld~~g~  236 (341)
                      .+.+.+...  +++|++|++.|.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~  109 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGI  109 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCc
Confidence            222222221  379999998873

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.71  E-value=0.022  Score=48.48  Aligned_cols=78  Identities=24%  Similarity=0.367  Sum_probs=49.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~-~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |++|.+.+..+...|+ +|+.++++ +++.+.+    ++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus         7 ~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   84 (258)
T 3afn_B            7 GKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSE-ACQQLVDEFVAKFG   84 (258)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHH-HHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            568999987 9999999998888999 88888887 6554432    2234321   12333321 12222222221  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            69999998874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.71  E-value=0.031  Score=48.24  Aligned_cols=79  Identities=18%  Similarity=0.271  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHHcCCce-e--cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~-v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++ +++..+.    +++.+... +  .|..+.+ .+.+.+.+...  
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASES-DFIEAIQTIVQSD  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHhc
Confidence            4678999987 9999999988888999 7888877 4444333    33344332 2  2333221 12222322221  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999998874

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.71  E-value=0.072  Score=46.39  Aligned_cols=73  Identities=18%  Similarity=0.196  Sum_probs=52.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+...     .+  ..+.+..     .|+||-|+..+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~--~~~~~~~-----advvi~~v~~~~   69 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA-----SS--PAEVCAA-----CDITIAMLADPA   69 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC-----SC--HHHHHHH-----CSEEEECCSSHH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-----CC--HHHHHHc-----CCEEEEEcCCHH
Confidence            58899999999998888888898 89999999999888887776421     11  3333322     578888877654


Q ss_pred             HHHHHH
Q 019414          239 NMISAF  244 (341)
Q Consensus       239 ~~~~~~  244 (341)
                      .+...+
T Consensus        70 ~~~~v~   75 (287)
T 3pdu_A           70 AAREVC   75 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            444444

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=95.70  E-value=0.096  Score=45.09  Aligned_cols=103  Identities=22%  Similarity=0.281  Sum_probs=62.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+.+ ++++.+.    +++.+...   ..|..+.+ .+.+.+.+...  
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVP-EIVKLFDQAVAHF   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999999989999 7776544 4444332    33445432   23333321 12222322222  


Q ss_pred             CCccEEEeccCC----------hH---------------HHHHHHHHhcCCCcEEEEEccCC
Q 019414          225 GGVDRSVECTGN----------ID---------------NMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       225 ~~~d~vld~~g~----------~~---------------~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +++|+++++.|.          .+               ..+.++..+.++ |+++.++...
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence            369999998873          11               223455556666 8999887643

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.70  E-value=0.062  Score=48.37  Aligned_cols=90  Identities=20%  Similarity=0.255  Sum_probs=62.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~-~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.|.+|.|+|.|.+|...++.++ .+|. +|++.+++.++.+...++|+..+   .  +  +.+.+.     ..|+|+.+
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~-----~aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV---D--S--LEELAR-----RSDCVSVS  227 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC---S--S--HHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe---C--C--HHHHhc-----cCCEEEEe
Confidence            35789999999999999999999 9998 89999988877666666776432   1  1  333332     26888887


Q ss_pred             cCChH----HH-HHHHHHhcCCCcEEEEEc
Q 019414          234 TGNID----NM-ISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       234 ~g~~~----~~-~~~~~~l~~~~g~~v~~g  258 (341)
                      +....    .+ ...+..++++ ..++.++
T Consensus       228 vp~~~~t~~li~~~~l~~mk~g-ailin~s  256 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPG-SRIVNTA  256 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred             CCCChHHHHHhhHHHHhcCCCC-CEEEECC
Confidence            75422    12 3456677775 6666554

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.68  E-value=0.058  Score=45.45  Aligned_cols=96  Identities=15%  Similarity=0.105  Sum_probs=65.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .++++.+||=+|+|. |..+..+++. |. +|++++.+++..+.+++. .. ++   ..+  ..+.+....++.||+|+-
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~-~~-~~---~~d--~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK-FN-VV---KSD--AIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT-SE-EE---CSC--HHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh-cc-ee---ecc--HHHHhhhcCCCCeeEEEE
Confidence            457889999998753 4455566665 77 899999999999988876 22 21   122  333332334458999985


Q ss_pred             c-----cCC---hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          233 C-----TGN---IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       233 ~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .     +..   ...+.++.+.|+|+ |++++...
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            3     222   35688899999998 99887653

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.68  E-value=0.039  Score=47.65  Aligned_cols=79  Identities=15%  Similarity=0.093  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHH-Hc----CCce---ecCCCCCC---hhHHHHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAK-KF----GVTD---FVNTSEHD---RPIQEVIAEM  222 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~~~-~~----g~~~---vv~~~~~~---~~~~~~i~~~  222 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++ ++++.+.+. ++    +...   ..|..+.+   ..+.+.+.+.
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            3568999986 9999999998888999 8888888 776654332 22    4321   23444331   1122222222


Q ss_pred             hc--CCccEEEeccC
Q 019414          223 TN--GGVDRSVECTG  235 (341)
Q Consensus       223 ~~--~~~d~vld~~g  235 (341)
                      ..  +++|++|++.|
T Consensus        89 ~~~~g~id~lv~nAg  103 (276)
T 1mxh_A           89 FRAFGRCDVLVNNAS  103 (276)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            11  37999999887

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.66  E-value=0.032  Score=47.14  Aligned_cols=78  Identities=18%  Similarity=0.249  Sum_probs=51.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHHc-CCc-e--ecCCCCCCh--hHHHHHHHHhcC-C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKKF-GVT-D--FVNTSEHDR--PIQEVIAEMTNG-G  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g--~~~vv~v~~~~~~~~~~~~~-g~~-~--vv~~~~~~~--~~~~~i~~~~~~-~  226 (341)
                      +.++||+|+ |++|.+.++.+...|  + +|+.++++.++.+.++++ +.. .  ..|..+.+.  .+.+.+.+..+. +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            467899987 999999998888889  7 899999998887766665 222 1  233333210  122233333332 6


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|++|++.|
T Consensus        82 id~li~~Ag   90 (250)
T 1yo6_A           82 LSLLINNAG   90 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CcEEEECCc
Confidence            999999876

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.65  E-value=0.096  Score=46.23  Aligned_cols=87  Identities=15%  Similarity=0.199  Sum_probs=59.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      .+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|... .  .  +  ..+.+.     ..|+||.|+..+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-~--~--~--~~~~~~-----~~DvVi~av~~~   97 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL-G--R--T--PAEVVS-----TCDITFACVSDP   97 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE-C--S--C--HHHHHH-----HCSEEEECCSSH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE-c--C--C--HHHHHh-----cCCEEEEeCCCH
Confidence            469999999999998888888898 7899999999888877776532 1  1  1  333232     278999888755


Q ss_pred             HHHHHHHH-------HhcCCCcEEEEEc
Q 019414          238 DNMISAFE-------CVHDGWGVAVLVG  258 (341)
Q Consensus       238 ~~~~~~~~-------~l~~~~g~~v~~g  258 (341)
                      ..+...+.       .+.++ ..++.++
T Consensus        98 ~~~~~v~~~~~~~~~~l~~~-~~vv~~s  124 (316)
T 2uyy_A           98 KAAKDLVLGPSGVLQGIRPG-KCYVDMS  124 (316)
T ss_dssp             HHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHcCchhHhhcCCCC-CEEEECC
Confidence            55555543       24454 5555454

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.65  E-value=0.045  Score=49.27  Aligned_cols=90  Identities=18%  Similarity=0.176  Sum_probs=65.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++..+.+..++.|+..+     .+  +.+.+.     ..|+|+-++.
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~--l~ell~-----~aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-----ED--LNEMLP-----KCDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-----SC--HHHHGG-----GCSEEEECSC
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-----CC--HHHHHh-----cCCEEEECCC
Confidence            57899999999999999999999999 89999988777777777777432     11  332221     3788887765


Q ss_pred             Ch-H---HH-HHHHHHhcCCCcEEEEEcc
Q 019414          236 NI-D---NM-ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~-~---~~-~~~~~~l~~~~g~~v~~g~  259 (341)
                      .. +   .+ ...+..++++ ..++.++.
T Consensus       230 lt~~t~~li~~~~l~~mk~g-ailIN~aR  257 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKG-VLIVNNAR  257 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCHHHHHhhcHHHHhcCCCC-CEEEECcC
Confidence            21 1   12 4667788886 77777764

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.64  E-value=0.087  Score=46.54  Aligned_cols=40  Identities=25%  Similarity=0.375  Sum_probs=34.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC---hhhHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---SKRFE  195 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~---~~~~~  195 (341)
                      .+.++||+|+|++|.+++..+...|+++|+++.|+   .+|.+
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~  189 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAV  189 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHH
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHH
Confidence            57899999999999999999999999889999898   55544

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.64  E-value=0.06  Score=46.03  Aligned_cols=77  Identities=18%  Similarity=0.233  Sum_probs=50.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCChhHHHHHHHH---hcC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVIAEM---TNG  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~~~~~~i~~~---~~~  225 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+ .+.+.+.+.   ..+
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            5 GQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQES-EVRSLFEQVDREQQG   82 (260)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHH-HHHHHHHHHHHHHTT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHH-HHHHHHHHHHHhcCC
Confidence            568899987 9999999999888999 8888889887755432    224321   12433322 122233332   135


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|+++++.|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999984

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.64  E-value=0.068  Score=47.53  Aligned_cols=77  Identities=18%  Similarity=0.266  Sum_probs=48.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC-----hhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHh
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-----SKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~-----~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+++.++     +++.+.+    ++.+...   ..|..+.+ .+.+.+.+..
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~-~v~~~~~~~~   82 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQV-SVDRAIDQII   82 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHH-HHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHH-HHHHHHHHHH
Confidence            567899987 9999999999999999 88876654     3333333    2334322   23433321 1333333322


Q ss_pred             c--CCccEEEeccC
Q 019414          224 N--GGVDRSVECTG  235 (341)
Q Consensus       224 ~--~~~d~vld~~g  235 (341)
                      .  +++|+++++.|
T Consensus        83 ~~~g~iD~lVnnAG   96 (324)
T 3u9l_A           83 GEDGRIDVLIHNAG   96 (324)
T ss_dssp             HHHSCCSEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence            2  37999999988

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.64  E-value=0.019  Score=51.48  Aligned_cols=99  Identities=21%  Similarity=0.176  Sum_probs=64.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC------C--ceecCCCCCChhHHHHHHHHhcC
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V--TDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g------~--~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ...+.+||.+|+|. |..+..+++..+..+|++++.+++..+.+++.-      .  .++ .....+  ..+.+.....+
T Consensus       118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv-~~~~~D--~~~~l~~~~~~  193 (334)
T 1xj5_A          118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRV-NLVIGD--GVAFLKNAAEG  193 (334)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTE-EEEESC--HHHHHHTSCTT
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcE-EEEECC--HHHHHHhccCC
Confidence            34568999998753 566777777665559999999999988887632      1  111 111122  43333333334


Q ss_pred             CccEEEe-cc---C------ChHHHHHHHHHhcCCCcEEEEE
Q 019414          226 GVDRSVE-CT---G------NIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       226 ~~d~vld-~~---g------~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      .||+|+- ..   +      ..+.++.+.+.|+++ |.++..
T Consensus       194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            7999883 32   1      235788999999998 999886

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.63  E-value=0.029  Score=47.81  Aligned_cols=75  Identities=21%  Similarity=0.333  Sum_probs=49.4

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      ++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ .+.+.+.+...  +++|++|
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRA-AIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHH-HHHHHHHTSCTTTCCCCEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHH-HHHHHHHHHHHhCCCCCEEE
Confidence            5788886 9999999998888999 899998988776554 3344321   23433321 13333333222  3799999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      ++.|
T Consensus        80 nnAg   83 (248)
T 3asu_A           80 NNAG   83 (248)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9877

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.63  E-value=0.059  Score=48.50  Aligned_cols=88  Identities=17%  Similarity=0.224  Sum_probs=61.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++. +.+.+.+.|+..+     .+  +.+.+.+     .|+|+-++.
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-----~~--l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-----ES--KDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-----SS--HHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-----CC--HHHHHhh-----CCEEEEecc
Confidence            47799999999999999999999999 999998775 4455666776432     11  4333333     688887765


Q ss_pred             ChH-H----HHHHHHHhcCCCcEEEEEc
Q 019414          236 NID-N----MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~~-~----~~~~~~~l~~~~g~~v~~g  258 (341)
                      ..+ +    -...+..++++ ..++.++
T Consensus       225 lt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             CcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            211 1    13566777886 8887776

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.63  E-value=0.035  Score=48.38  Aligned_cols=79  Identities=24%  Similarity=0.312  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-----------HHHHHHcCCce---ecCCCCCCh--hHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTD---FVNTSEHDR--PIQEV  218 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-----------~~~~~~~g~~~---vv~~~~~~~--~~~~~  218 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++           .+.+++.+...   ..|..+.+.  .+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            3678999987 9999999988888899 88888888652           22334445432   224433220  12222


Q ss_pred             HHHHhcCCccEEEeccCC
Q 019414          219 IAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       219 i~~~~~~~~d~vld~~g~  236 (341)
                      +.+.. +++|++|++.|.
T Consensus        87 ~~~~~-g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQF-GGIDICVNNASA  103 (285)
T ss_dssp             HHHHH-SCCSEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCC
Confidence            32222 379999998873

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.62  E-value=0.042  Score=49.13  Aligned_cols=88  Identities=23%  Similarity=0.305  Sum_probs=64.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.++++|+...      +  +.+.+     ...|+|+.++.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~------~--l~ell-----~~aDvV~l~~P  228 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQL------P--LEEIW-----PLCDFITVHTP  228 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEEC------C--HHHHG-----GGCSEEEECCC
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCceeC------C--HHHHH-----hcCCEEEEecC
Confidence            57899999999999999999999998 89999887665 45667777421      1  33222     14799998876


Q ss_pred             ChH----HH-HHHHHHhcCCCcEEEEEcc
Q 019414          236 NID----NM-ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~----~~-~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+    .+ ...+..++++ +.++.++.
T Consensus       229 ~t~~t~~li~~~~l~~mk~g-ailIN~ar  256 (335)
T 2g76_A          229 LLPSTTGLLNDNTFAQCKKG-VRVVNCAR  256 (335)
T ss_dssp             CCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            432    12 4567788887 88888875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.62  E-value=0.043  Score=46.90  Aligned_cols=77  Identities=21%  Similarity=0.230  Sum_probs=48.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHH-HHH---cCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEE-AKK---FGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~-~~~---~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++  .+. .++   .+...   ..|..+.+ .+.+.+.+...  
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKA-NFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHh
Confidence            467899987 9999999888888899 88888888766  332 222   23321   13433321 12222222211  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        80 g~iD~lv~nAg   90 (258)
T 3a28_C           80 GGFDVLVNNAG   90 (258)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999887

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.61  E-value=0.017  Score=51.38  Aligned_cols=79  Identities=11%  Similarity=0.031  Sum_probs=47.1

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHc----CCce-ecCCCCCChhHHHHHHHHh
Q 019414          152 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKF----GVTD-FVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       152 ~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~----g~~~-vv~~~~~~~~~~~~i~~~~  223 (341)
                      -..+++.+|||+|+ |.+|...++.+...|+ +|++++++.++  .+.++.+    +... ..|..+.     +.+.+..
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~~~   82 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA-----CSVQRAV   82 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCH-----HHHHHHH
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCCH-----HHHHHHH
Confidence            45678899999987 9999999998888898 88888887654  1223333    1211 1233221     1233333


Q ss_pred             cC-CccEEEeccCC
Q 019414          224 NG-GVDRSVECTGN  236 (341)
Q Consensus       224 ~~-~~d~vld~~g~  236 (341)
                      .+ ++|+||++.+.
T Consensus        83 ~~~~~d~Vih~A~~   96 (335)
T 1rpn_A           83 IKAQPQEVYNLAAQ   96 (335)
T ss_dssp             HHHCCSEEEECCSC
T ss_pred             HHcCCCEEEECccc
Confidence            33 68999998873

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.60  E-value=0.14  Score=44.98  Aligned_cols=89  Identities=16%  Similarity=0.106  Sum_probs=62.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      ..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...     .+  ..+.+.+     .|+||-++..
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~--~~e~~~~-----aDvVi~~vp~   75 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC-----ES--VKAALSA-----SPATIFVLLD   75 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC-----SS--HHHHHHH-----SSEEEECCSS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec-----CC--HHHHHhc-----CCEEEEEeCC
Confidence            3569999999999999998888998 89999999999888887776321     11  3333332     6888888876


Q ss_pred             hHHHHHHH-----HHhcCCCcEEEEEcc
Q 019414          237 IDNMISAF-----ECVHDGWGVAVLVGV  259 (341)
Q Consensus       237 ~~~~~~~~-----~~l~~~~g~~v~~g~  259 (341)
                      +..++..+     ..+.++ ..++.++.
T Consensus        76 ~~~~~~v~~~~~l~~~~~g-~ivid~st  102 (306)
T 3l6d_A           76 NHATHEVLGMPGVARALAH-RTIVDYTT  102 (306)
T ss_dssp             HHHHHHHHTSTTHHHHTTT-CEEEECCC
T ss_pred             HHHHHHHhcccchhhccCC-CEEEECCC
Confidence            55444433     234454 56666654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.60  E-value=0.06  Score=50.50  Aligned_cols=94  Identities=11%  Similarity=0.056  Sum_probs=58.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHH-cCCce-ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~-~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .+.+|+|+|+|.+|.+++..+... +. +|++++++.++.+.+.+ .+... .+|..+    .. .+.+... ++|+|++
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d----~~-~l~~~l~-~~DvVIn   94 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD----DS-ALDKVLA-DNDVVIS   94 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC----HH-HHHHHHH-TSSEEEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC----HH-HHHHHHc-CCCEEEE
Confidence            356799999999999988888776 66 78889899888665543 34322 233332    11 2222222 5899999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      |++..........++.++ -.++..
T Consensus        95 ~tp~~~~~~v~~a~l~~g-~~vvd~  118 (467)
T 2axq_A           95 LIPYTFHPNVVKSAIRTK-TDVVTS  118 (467)
T ss_dssp             CSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred             CCchhhhHHHHHHHHhcC-CEEEEe
Confidence            988643333344456654 455544

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.60  E-value=0.056  Score=48.25  Aligned_cols=88  Identities=23%  Similarity=0.217  Sum_probs=61.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.+.+.+.|+...      +  +.+.+.     ..|+|+.++.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~------~--l~e~l~-----~aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV------S--TPELAA-----QSDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC------C--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC------C--HHHHHh-----hCCEEEEeCC
Confidence            46789999999999999999999998 88999887766666666665321      1  333332     2689988876


Q ss_pred             ChH----HH-HHHHHHhcCCCcEEEEEc
Q 019414          236 NID----NM-ISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~~----~~-~~~~~~l~~~~g~~v~~g  258 (341)
                      ...    .+ ...+..++++ ..++.++
T Consensus       220 ~~~~t~~~i~~~~~~~mk~g-ailIn~s  246 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKET-AVFINIS  246 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-CEEEECS
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            421    22 3556777776 6666554

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=95.60  E-value=0.043  Score=47.47  Aligned_cols=79  Identities=23%  Similarity=0.315  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-----------HHHHHHcCCce---ecCCCCCChhHHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTD---FVNTSEHDRPIQEVIA  220 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-----------~~~~~~~g~~~---vv~~~~~~~~~~~~i~  220 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.++++.++           .+.+++.+...   ..|..+.+ .+.+.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~   82 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREED-QVRAAVA   82 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHH-HHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHH
Confidence            4678999987 9999999998888999 88888887643           11223334432   23443322 1222222


Q ss_pred             HHhc--CCccEEEeccCC
Q 019414          221 EMTN--GGVDRSVECTGN  236 (341)
Q Consensus       221 ~~~~--~~~d~vld~~g~  236 (341)
                      +...  +++|+++++.|.
T Consensus        83 ~~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCc
Confidence            2221  379999998873

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.59  E-value=0.031  Score=47.76  Aligned_cols=77  Identities=17%  Similarity=0.227  Sum_probs=48.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++ ++++.+.+    ++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus         7 ~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   84 (261)
T 1gee_A            7 GKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVES-DVINLVQSAIKEFG   84 (261)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHH-HHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence            568999987 9999999988888899 8888888 66654432    2334322   12333321 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        85 ~id~li~~Ag   94 (261)
T 1gee_A           85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6999999877

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.59  E-value=0.048  Score=47.23  Aligned_cols=76  Identities=20%  Similarity=0.290  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---ecCCCCCChhHHHHHHHHhc-CCccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTN-GGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~---vv~~~~~~~~~~~~i~~~~~-~~~d~  229 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+ .+.+.+.+... +++|+
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~id~  106 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSED-SVLAAIEAANQLGRLRY  106 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHH-HHHHHHHHHTTSSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHH-HHHHHHHHHHHhCCCCe
Confidence            3578999987 9999999998888999 899999998886654 4455432   23433322 23333333311 26899


Q ss_pred             EEec
Q 019414          230 SVEC  233 (341)
Q Consensus       230 vld~  233 (341)
                      ++++
T Consensus       107 lv~~  110 (281)
T 3ppi_A          107 AVVA  110 (281)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9987

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.59  E-value=0.028  Score=47.85  Aligned_cols=75  Identities=21%  Similarity=0.366  Sum_probs=48.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHh--cCCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~--~~~~d~vl  231 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++++.    ++.++.. ..|..+.+ .+.+.+.+..  .+++|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVADAA-QVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTCHH-HHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            3578999987 9999999999999999 88888887653    2233221 23433321 1222233222  13799999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      ++.|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            98873

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.58  E-value=0.024  Score=50.50  Aligned_cols=76  Identities=20%  Similarity=0.261  Sum_probs=47.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH--HHHHHcCC--c-eecCCCCCChhHHHHHHHHhcC-CccE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF--EEAKKFGV--T-DFVNTSEHDRPIQEVIAEMTNG-GVDR  229 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~--~~~~~~g~--~-~vv~~~~~~~~~~~~i~~~~~~-~~d~  229 (341)
                      +.+|||+|+ |.+|...++.+...|+ +|++++++.++.  +.+++++.  . ..+..+-.+   .+.+.+...+ ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~~~~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE---FSNIIRTIEKVQPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC---HHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCC---HHHHHHHHHhcCCCE
Confidence            468999987 9999999988888898 899998876542  23444431  1 122111112   1122333233 6899


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      ||++.+.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.58  E-value=0.065  Score=46.53  Aligned_cols=79  Identities=16%  Similarity=0.178  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++ ++++.+.    +++.+...   ..|..+.+ .+.+.+.+...  
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  105 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLS-SHQATVDAVVAEF  105 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGG-GHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999999989999 7888774 5555433    23344432   23444332 13333332222  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus       106 g~iD~lvnnAg~  117 (280)
T 4da9_A          106 GRIDCLVNNAGI  117 (280)
T ss_dssp             SCCCEEEEECC-
T ss_pred             CCCCEEEECCCc
Confidence            379999998874

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.57  E-value=0.045  Score=45.54  Aligned_cols=95  Identities=17%  Similarity=0.217  Sum_probs=58.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+|||+|+ |.+|...++.+...|. +|+++++++++.+.+. .+...+ .|..+     .+.+.+... ++|+||++.|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d-----~~~~~~~~~-~~d~vi~~a~   76 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHLKVKKADVSS-----LDEVCEVCK-GADAVISAFN   76 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTEEEECCCTTC-----HHHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-CceEEEEecCCC-----HHHHHHHhc-CCCEEEEeCc
Confidence            47999987 9999999999998998 9999999887653221 112111 22222     122333332 5999999987


Q ss_pred             Ch-----------HHHHHHHHHhcCC-CcEEEEEccC
Q 019414          236 NI-----------DNMISAFECVHDG-WGVAVLVGVP  260 (341)
Q Consensus       236 ~~-----------~~~~~~~~~l~~~-~g~~v~~g~~  260 (341)
                      ..           .....+++.+... ..+++.++..
T Consensus        77 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           77 PGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             C------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            53           1223344444433 1488887753

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.57  E-value=0.07  Score=47.99  Aligned_cols=135  Identities=13%  Similarity=0.087  Sum_probs=80.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          158 SSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~--g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -+|.|+|+|.+|...+..++..  +++.+.++++++++.+. .+++|+ .++  .+    +.+.+.+   ..+|+|+.|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~~----~~~ll~~---~~~D~V~i~t   83 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--AS----LTDMLAQ---TDADIVILTT   83 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--SC----HHHHHHH---CCCSEEEECS
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--CC----HHHHhcC---CCCCEEEECC
Confidence            3689999999998877777665  66344466778777554 556776 332  11    4333322   3699999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCccccc---ccceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      ......+.+..++..  |+-+++.-+-.......   ....-.+++.+.-..  ..+....++.+.+++++|.+-
T Consensus        84 p~~~h~~~~~~al~~--gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  154 (354)
T 3q2i_A           84 PSGLHPTQSIECSEA--GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVK--QNRRNATLQLLKRAMQEKRFG  154 (354)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC--GGGGSHHHHHHHHHHHTTTTC
T ss_pred             CcHHHHHHHHHHHHC--CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEE--cccCCHHHHHHHHHHhcCCCC
Confidence            887778888888876  56777764321111110   001112234333222  222224578888999998763

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.57  E-value=0.071  Score=45.74  Aligned_cols=78  Identities=13%  Similarity=0.207  Sum_probs=47.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK---RFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~---~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+.++..   +.+.    +++.+...   ..|..+.+ .+.+.+.+...
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~   87 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEE-EVAKLFDFAEK   87 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHH
Confidence            4678999987 9999999988888899 7888765443   3222    22234322   23443322 12222222221


Q ss_pred             --CCccEEEeccC
Q 019414          225 --GGVDRSVECTG  235 (341)
Q Consensus       225 --~~~d~vld~~g  235 (341)
                        +++|+++++.|
T Consensus        88 ~~g~iD~lvnnAg  100 (262)
T 3ksu_A           88 EFGKVDIAINTVG  100 (262)
T ss_dssp             HHCSEEEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              37999999887

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=95.55  E-value=0.039  Score=45.79  Aligned_cols=95  Identities=14%  Similarity=0.189  Sum_probs=59.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|||+|+ |.+|...++.+...|+ +|+++++++++.+.+  .++.. ..|..+    ..+.+.+... ++|+||++.|.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~~~~~~D~~d----~~~~~~~~~~-~~d~vi~~ag~   73 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNVKAVHFDVDW----TPEEMAKQLH-GMDAIINVSGS   73 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTEEEEECCTTS----CHHHHHTTTT-TCSEEEECCCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCceEEEecccC----CHHHHHHHHc-CCCEEEECCcC
Confidence            5899986 9999999999988898 899999988765332  12221 123322    0233444333 69999999885


Q ss_pred             hH---------HHHHHHHHhcCC-CcEEEEEccCC
Q 019414          237 ID---------NMISAFECVHDG-WGVAVLVGVPS  261 (341)
Q Consensus       237 ~~---------~~~~~~~~l~~~-~g~~v~~g~~~  261 (341)
                      ..         ....+++.+... .++++.++...
T Consensus        74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            31         122333333332 25888887543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.55  E-value=0.027  Score=48.83  Aligned_cols=77  Identities=13%  Similarity=0.226  Sum_probs=49.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCC--c-e--ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV--T-D--FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~--~-~--vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ++..  . .  ..|..+.+ .+.+.+.+...  +++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRA-AMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHH-HHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhCCCC
Confidence            57899987 9999999998888999 8999999987765543 3321  1 1  23333321 13333333222  3689


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++|++.|.
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998763

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.54  E-value=0.051  Score=48.21  Aligned_cols=79  Identities=28%  Similarity=0.352  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC----------hhhHH----HHHHcCCcee---cCCCCCChhHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS----------SKRFE----EAKKFGVTDF---VNTSEHDRPIQE  217 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~----------~~~~~----~~~~~g~~~v---v~~~~~~~~~~~  217 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++          .++.+    .+++.+....   .|..+.+ .+.+
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~  103 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWD-QAAG  103 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHH-HHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHH
Confidence            4678999986 9999999998888999 89988776          33332    2334454322   2332221 1222


Q ss_pred             HHHHHhc--CCccEEEeccCC
Q 019414          218 VIAEMTN--GGVDRSVECTGN  236 (341)
Q Consensus       218 ~i~~~~~--~~~d~vld~~g~  236 (341)
                      .+.+...  +++|++|++.|.
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            2222221  379999998873

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.54  E-value=0.11  Score=45.25  Aligned_cols=78  Identities=14%  Similarity=0.209  Sum_probs=50.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc----CCce---ecCCCCCChhHHHHHHHHh--c
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD---FVNTSEHDRPIQEVIAEMT--N  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~---vv~~~~~~~~~~~~i~~~~--~  224 (341)
                      .+.++||+|+ |++|.+.+..+...|+ +|+.++++.++.+.+. ++    +...   ..|..+.+ .+.+.+.+..  .
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPD-MVQNTVSELIKVA  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999998888999 8999989887755332 22    4322   13433321 1222222221  2


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37899999887

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.53  E-value=0.098  Score=45.37  Aligned_cols=78  Identities=22%  Similarity=0.313  Sum_probs=48.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH-HH---c-CCce-e--cCCCCCChhHHHHHHHHhc--
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA-KK---F-GVTD-F--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~~-~~---~-g~~~-v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++ ++++.+.+ ++   . +... .  .|..+.+ .+.+.+.+...  
T Consensus        25 ~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  102 (281)
T 3v2h_A           25 TKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPS-EIADMMAMVADRF  102 (281)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHH-HHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHH-HHHHHHHHHHHHC
Confidence            578999987 9999999999999999 8888887 54444332 22   2 2221 1  2333221 12222222221  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++++.|.
T Consensus       103 g~iD~lv~nAg~  114 (281)
T 3v2h_A          103 GGADILVNNAGV  114 (281)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.53  E-value=0.028  Score=50.69  Aligned_cols=134  Identities=14%  Similarity=0.086  Sum_probs=79.9

Q ss_pred             EEEEECCCHHHH-HHHHHHHHc-CCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGL-AAAEGARIA-GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~-~a~~la~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|+|.+|. ..+..++.. +++.+.++++++++.+ .++++|+...   .+    +.+.+.   ...+|+|+.|+.
T Consensus        29 rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~---~~----~~~ll~---~~~~D~V~i~tp   98 (350)
T 3rc1_A           29 RVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV---EG----YPALLE---RDDVDAVYVPLP   98 (350)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE---ES----HHHHHT---CTTCSEEEECCC
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc---CC----HHHHhc---CCCCCEEEECCC
Confidence            689999999998 556655555 6733445677777655 4566787543   11    322221   236999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      .....+.+..++..  |+-|++.-+-....-...   ...-.+++.+.-..  ..+....++.+-+++++|.+-
T Consensus        99 ~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~iG  168 (350)
T 3rc1_A           99 AVLHAEWIDRALRA--GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENF--MFLHHPQHRQVADMLDEGVIG  168 (350)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEEC--GGGGCTHHHHHHHHHHTTTTC
T ss_pred             cHHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEe--cccCCHHHHHHHHHHhcCCCC
Confidence            87788888888886  566777643221111110   01112344443222  222335688888999998763

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.53  E-value=0.024  Score=50.84  Aligned_cols=133  Identities=16%  Similarity=0.157  Sum_probs=79.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhc-CCccEEEeccC
Q 019414          159 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~-~~~d~vld~~g  235 (341)
                      +|.|+|+|.+|...+..++.. +++.+.+.++++++.+. ++++|+. ++  .+    +.    ++.. ..+|+|+.|+.
T Consensus         6 rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~~--~~----~~----~~l~~~~~D~V~i~tp   74 (344)
T 3euw_A            6 RIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-AV--AS----PD----EVFARDDIDGIVIGSP   74 (344)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-EE--SS----HH----HHTTCSCCCEEEECSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-ee--CC----HH----HHhcCCCCCEEEEeCC
Confidence            689999999999887777665 66334467777777554 5556743 22  11    32    2223 37999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      .....+.+..++..  |+-+++.-+.........   ...-.+++.+.-..  ..+....++.+.+++++|.+-
T Consensus        75 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  144 (344)
T 3euw_A           75 TSTHVDLITRAVER--GIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGF--NRRFDPSFAAINARVANQEIG  144 (344)
T ss_dssp             GGGHHHHHHHHHHT--TCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred             chhhHHHHHHHHHc--CCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecc--hhhcCHHHHHHHHHHhcCCCC
Confidence            87788888888876  566666543211111100   01112333333222  222224678888999998763

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.50  E-value=0.036  Score=49.18  Aligned_cols=98  Identities=14%  Similarity=0.118  Sum_probs=62.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-------eecCCCCCChhHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-------DFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-------~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      .+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-..       .-+.....+  ..+.+.. ..+.||
T Consensus       108 ~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D--~~~~l~~-~~~~fD  183 (314)
T 2b2c_A          108 DPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD--GFEFLKN-HKNEFD  183 (314)
T ss_dssp             SCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC--HHHHHHH-CTTCEE
T ss_pred             CCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEECh--HHHHHHh-cCCCce
Confidence            457999998753 66667777765555999999999999988874211       001111122  4333333 345899


Q ss_pred             EEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          229 RSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       229 ~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|+ |...         ..+.++.+.+.|+|+ |.++...
T Consensus       184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          184 VIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             EEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            988 3321         035678899999998 9998764

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.50  E-value=0.15  Score=44.51  Aligned_cols=87  Identities=20%  Similarity=0.209  Sum_probs=59.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      -+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|+.. .  .  +  ..+.+.     ..|+||.|+..+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-~--~--~--~~~~~~-----~~D~vi~~vp~~   71 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA-C--E--N--NQKVAA-----ASDIIFTSLPNA   71 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE-C--S--S--HHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee-c--C--C--HHHHHh-----CCCEEEEECCCH
Confidence            479999999999998888888898 8999999998888777666531 1  1  1  333332     278999888665


Q ss_pred             HHHHHHH-------HHhcCCCcEEEEEc
Q 019414          238 DNMISAF-------ECVHDGWGVAVLVG  258 (341)
Q Consensus       238 ~~~~~~~-------~~l~~~~g~~v~~g  258 (341)
                      ..++..+       ..+.++ ..++.+.
T Consensus        72 ~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           72 GIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            5454444       345554 5555543

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.50  E-value=0.028  Score=48.43  Aligned_cols=97  Identities=21%  Similarity=0.262  Sum_probs=63.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCC
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIA---GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~---g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      +++|.+||=+|+|. |..+..+++..   |+ +|++++.+++..+.+++    .+...-+.....+      +.++..+.
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D------~~~~~~~~  139 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD------IRDIAIEN  139 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC------TTTCCCCS
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeecc------cccccccc
Confidence            78999999999863 77777888865   55 89999999998887765    3332111111111      11122236


Q ss_pred             ccEEEeccC----C----hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          227 VDRSVECTG----N----IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       227 ~d~vld~~g----~----~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +|+|+-...    .    ...++++.+.|+|+ |++++...
T Consensus       140 ~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~  179 (261)
T 4gek_A          140 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  179 (261)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence            888874321    1    13578899999998 99988754

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=95.49  E-value=0.042  Score=47.85  Aligned_cols=69  Identities=13%  Similarity=0.183  Sum_probs=49.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCC---ceecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~---~~vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      .+.+++|+|+|++|.+++..+...|+.+|+++.++.++.+. +++++.   ..++..++           .. ..+|+||
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----------l~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----------LK-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CC-SCEEEEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----------hc-CCCCEEE
Confidence            57899999999999999888888997789999999888554 444442   11221111           11 3689999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      +|++.
T Consensus       193 naTp~  197 (281)
T 3o8q_A          193 NSTSA  197 (281)
T ss_dssp             ECSCC
T ss_pred             EcCcC
Confidence            99865

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=95.48  E-value=0.053  Score=47.36  Aligned_cols=78  Identities=21%  Similarity=0.253  Sum_probs=49.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-HHH----HHHcCCcee---cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEE----AKKFGVTDF---VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~----~~~~g~~~v---v~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++ .+.    +++.+....   .|..+.+ .+.+.+.+...  
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQ-HCKDIVQETVRQL  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHc
Confidence            4678999987 9999999999989999 88888777653 222    233444321   2443322 12222222221  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus       124 g~iD~lvnnAg  134 (291)
T 3ijr_A          124 GSLNILVNNVA  134 (291)
T ss_dssp             SSCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999876

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.48  E-value=0.11  Score=43.02  Aligned_cols=75  Identities=15%  Similarity=0.096  Sum_probs=53.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|+|+|+|.+|...++.+...|. .|+++++++++.+.+. ..+...+. .+..+   .+.+++..-..+|+++-+++..
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~-gd~~~---~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIH-GDGSH---KEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEE-SCTTS---HHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEE-cCCCC---HHHHHhcCcccCCEEEEecCCc
Confidence            48899999999999999999998 8999999999887754 46664332 22222   1233333234799999999875


Q ss_pred             H
Q 019414          238 D  238 (341)
Q Consensus       238 ~  238 (341)
                      .
T Consensus        77 ~   77 (218)
T 3l4b_C           77 E   77 (218)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.48  E-value=0.042  Score=48.63  Aligned_cols=96  Identities=15%  Similarity=0.117  Sum_probs=63.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHc-CCc---eecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          158 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF-GVT---DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~-g~~---~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .+||++|+|. |.++..+++.. +. +|++++.+++-.+.+++. +..   ++ .....|  ..+.+....++.||+||-
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv-~v~~~D--a~~~l~~~~~~~fDvIi~  165 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRV-KIRVDD--ARMVAESFTPASRDVIIR  165 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTE-EEEESC--HHHHHHTCCTTCEEEEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCce-EEEECc--HHHHHhhccCCCCCEEEE
Confidence            4899998764 67777888865 56 899999999999998874 221   11 011122  444444333458999874


Q ss_pred             -ccC---------ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          233 -CTG---------NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       233 -~~g---------~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                       ...         ..+.++.+.+.|+++ |.++....
T Consensus       166 D~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~~  201 (317)
T 3gjy_A          166 DVFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANCG  201 (317)
T ss_dssp             CCSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEec
Confidence             321         135688899999998 98876653

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=95.48  E-value=0.091  Score=45.44  Aligned_cols=105  Identities=17%  Similarity=0.247  Sum_probs=65.4

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH--
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM--  222 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~--  222 (341)
                      ...++++|++||=.|+|. |..++.+++.. +...|++++.++++.+.+++    .|...+. ....+  ..+.....  
T Consensus        77 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~-~~~~D--~~~~~~~~~~  152 (274)
T 3ajd_A           77 IVLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTI-IINAD--MRKYKDYLLK  152 (274)
T ss_dssp             HHHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEE-EEESC--HHHHHHHHHH
T ss_pred             HHhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEE-EEeCC--hHhcchhhhh
Confidence            345778999988887653 55566677655 43599999999998877654    4553221 11122  22221111  


Q ss_pred             hcCCccEEE-e--ccCC---------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 TNGGVDRSV-E--CTGN---------------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~~~~~d~vl-d--~~g~---------------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+.||.|+ |  |+|.                     ...++.+++.|+++ |+++....
T Consensus       153 ~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~stc  212 (274)
T 3ajd_A          153 NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYSTC  212 (274)
T ss_dssp             TTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEEC
Confidence            134799987 5  3331                     34577888899998 99887653

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=95.47  E-value=0.043  Score=47.34  Aligned_cols=79  Identities=22%  Similarity=0.215  Sum_probs=48.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+.+ ++++.+.    +++.+...   ..|..+.+ .+.+.+.+...  
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~v~~~~~~~~~~~  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQES-EVEALFAAVIERW  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHHc
Confidence            4678899987 9999999998889999 7777666 5554443    23344432   23433322 12222222211  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.46  E-value=0.035  Score=50.28  Aligned_cols=91  Identities=16%  Similarity=0.187  Sum_probs=64.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|.++|++.+++..+.+..+++|+..+   .  +  +.+.+.     ..|+|+.++.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~---~--~--l~ell~-----~aDvV~l~~P  230 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV---E--N--IEELVA-----QADIVTVNAP  230 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC---S--S--HHHHHH-----TCSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec---C--C--HHHHHh-----cCCEEEECCC
Confidence            67899999999999999999999998339999888767777777776422   1  1  333222     3788888775


Q ss_pred             ChH----HH-HHHHHHhcCCCcEEEEEcc
Q 019414          236 NID----NM-ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~----~~-~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+    .+ +..+..++++ +.++.++.
T Consensus       231 ~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            421    22 3456777776 77777764

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.46  E-value=0.039  Score=47.53  Aligned_cols=100  Identities=16%  Similarity=0.134  Sum_probs=64.5

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceec--CCCCCChhHHHHHHHHhcCC
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV--NTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv--~~~~~~~~~~~~i~~~~~~~  226 (341)
                      .....+.++++||=+|+|. |..++.+++. |+ .|++++.+++..+.+++.-....+  +..+.+  .  .......+.
T Consensus        38 l~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~--~--~~~~~~~~~  110 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDIT--A--EIPKELAGH  110 (261)
T ss_dssp             HHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTT--S--CCCGGGTTC
T ss_pred             HHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecc--c--ccccccCCC
Confidence            4556788999999999863 7777777774 76 999999999999988874332211  111111  0  000011247


Q ss_pred             ccEEEeccC----C----hHHHHHHHHHhcCCCcEEEEE
Q 019414          227 VDRSVECTG----N----IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       227 ~d~vld~~g----~----~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ||+|+-...    .    ...+..+.+.+ |+ |++++.
T Consensus       111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            999985421    1    13567777888 97 988765

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.45  E-value=0.059  Score=48.95  Aligned_cols=136  Identities=15%  Similarity=0.123  Sum_probs=79.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--------cCCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414          158 SSVAVFGLGAVGLAAAEGARI--------AGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~--------~g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      =+|.|+|+|.+|..-+...+.        -+++.|.++++++++.+ .++++|...++..      +.+.+.   +..+|
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d------~~ell~---~~~iD   96 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATAD------WRALIA---DPEVD   96 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESC------HHHHHH---CTTCC
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCC------HHHHhc---CCCCc
Confidence            479999999999765443321        14534555566666655 5667888655421      333332   23699


Q ss_pred             EEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCC
Q 019414          229 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       229 ~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  305 (341)
                      +|+-|+......+.+..++..  |+-|++.-+-....-...   ...-.+++.+.-..  .++....++.+-+++++|++
T Consensus        97 aV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~--~~R~~p~~~~~k~~i~~G~i  172 (393)
T 4fb5_A           97 VVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAPAYADAERMLATAERSGKVAALGY--NYIQNPVMRHIRKLVGDGVI  172 (393)
T ss_dssp             EEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECC--GGGGCHHHHHHHHHHHTTTT
T ss_pred             EEEECCChHHHHHHHHHHHhc--CCeEEEccCCcccHHHHHHhhhhHHhcCCcccccc--ccccChHHHHHHHHHHcCCC
Confidence            999999887788899999986  788888743222111110   01012344333222  22233468888899999876


Q ss_pred             C
Q 019414          306 E  306 (341)
Q Consensus       306 ~  306 (341)
                      -
T Consensus       173 G  173 (393)
T 4fb5_A          173 G  173 (393)
T ss_dssp             C
T ss_pred             c
Confidence            3

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.45  E-value=0.078  Score=47.17  Aligned_cols=133  Identities=17%  Similarity=0.162  Sum_probs=79.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|.|+|+|.+|...+..++.. +++.+.+.++++++.+. .+++|+.    +.+    +.+.+.   ...+|+|+.|+..
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~----~~~~l~---~~~~D~V~i~tp~   73 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VRT----IDAIEA---AADIDAVVICTPT   73 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----ECC----HHHHHH---CTTCCEEEECSCG
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cCC----HHHHhc---CCCCCEEEEeCCc
Confidence            588999999999887777665 66334467777777554 5567765    222    333332   2369999999988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      ....+.+..++..  |+-+++.-+.........   ...-.+++.+.-..  ..+....++.+.+++++|.+-
T Consensus        74 ~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           74 DTHADLIERFARA--GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGF--NRRFDPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             GGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC--GGGGCHHHHHHHHHHHTTTTC
T ss_pred             hhHHHHHHHHHHc--CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcc--cccCCHHHHHHHHHHHcCCCC
Confidence            7788888888876  566777643211111110   01011334343222  222234678888999998763

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.44  E-value=0.064  Score=46.57  Aligned_cols=34  Identities=32%  Similarity=0.315  Sum_probs=29.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~   44 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDIC   44 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecc
Confidence            4678999987 9999999999989999 88888776

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=95.42  E-value=0.1  Score=45.56  Aligned_cols=79  Identities=18%  Similarity=0.184  Sum_probs=48.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh--hhHH----HHHHcCCcee---cCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFE----EAKKFGVTDF---VNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~--~~~~----~~~~~g~~~v---v~~~~~~~~~~~~i~~~~~-  224 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++.  ++.+    .+++.+....   .|..+.+ .+.+.+.+... 
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~  125 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDES-FARSLVHKAREA  125 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHH
Confidence            4678999987 9999999999889999 888887762  2222    2334454322   2332221 12222222211 


Q ss_pred             -CCccEEEeccCC
Q 019414          225 -GGVDRSVECTGN  236 (341)
Q Consensus       225 -~~~d~vld~~g~  236 (341)
                       +++|+++++.|.
T Consensus       126 ~g~iD~lv~nAg~  138 (294)
T 3r3s_A          126 LGGLDILALVAGK  138 (294)
T ss_dssp             HTCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999998773

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.41  E-value=0.04  Score=48.93  Aligned_cols=75  Identities=20%  Similarity=0.207  Sum_probs=49.8

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-----C--Ccee--cCCCCCChhHHHHHHHHhc
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----G--VTDF--VNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-----g--~~~v--v~~~~~~~~~~~~i~~~~~  224 (341)
                      .++.+|||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+.     +  ...+  .|..+.+     .+.+.. 
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~~~-   81 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG-----AYDEVI-   81 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTT-----TTTTTT-
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChH-----HHHHHH-
Confidence            35678999987 9999999998888898 899998888775544321     2  2222  2433322     111211 


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      .++|+||++.+.
T Consensus        82 ~~~d~vih~A~~   93 (342)
T 1y1p_A           82 KGAAGVAHIASV   93 (342)
T ss_dssp             TTCSEEEECCCC
T ss_pred             cCCCEEEEeCCC
Confidence            268999998863

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.41  E-value=0.053  Score=50.50  Aligned_cols=104  Identities=16%  Similarity=0.216  Sum_probs=69.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHH-HcCC--CEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCc
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGAR-IAGA--SRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~-~~g~--~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      ..+....+|||+|+|++|..++.++. ..+.  ..|+.++..+.+.+..+..|.... +.-+..+  ..+.+.++..++ 
T Consensus         8 ~~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadn--v~~~l~aLl~~~-   84 (480)
T 2ph5_A            8 KKILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQN--YLEVIGSTLEEN-   84 (480)
T ss_dssp             TCBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTT--HHHHTGGGCCTT-
T ss_pred             ceecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchh--HHHHHHHHhcCC-
Confidence            34556678999999999999887765 4555  367777777766666666675332 2222232  444455455444 


Q ss_pred             cEEEeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          228 DRSVECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       228 d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      |+|++++-....+..+-.|+..+ -.++.+..
T Consensus        85 DvVIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           85 DFLIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             CEEEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             CEEEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            99999876656777777788876 66666653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.40  E-value=0.043  Score=47.74  Aligned_cols=78  Identities=24%  Similarity=0.320  Sum_probs=49.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHh--cCC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+..  .++
T Consensus        44 ~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           44 NKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKE-EISEVINKILTEHKN  121 (285)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHH-HHHHHHHHHHHHCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHH-HHHHHHHHHHHhcCC
Confidence            568999987 9999999988888898 788888887765433    2234322   13433321 1222232221  137


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|++|++.|.
T Consensus       122 id~li~~Ag~  131 (285)
T 2c07_A          122 VDILVNNAGI  131 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.40  E-value=0.034  Score=49.66  Aligned_cols=89  Identities=20%  Similarity=0.238  Sum_probs=63.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.+..+++|+..+      +  +.+.+.+     .|+|+-++.
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~------~--l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQV------A--CSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEEC------C--HHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCceeC------C--HHHHHhh-----CCEEEEcCC
Confidence            47799999999999999999999999 89999988766666666775321      1  3333322     688887765


Q ss_pred             Ch-H---HH-HHHHHHhcCCCcEEEEEcc
Q 019414          236 NI-D---NM-ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~-~---~~-~~~~~~l~~~~g~~v~~g~  259 (341)
                      .. +   .+ ...+..++++ ..++.++.
T Consensus       210 ~t~~t~~li~~~~l~~mk~g-ailIN~ar  237 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPG-ALLVNPCR  237 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence            21 1   12 3566777776 77777764

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.40  E-value=0.06  Score=47.68  Aligned_cols=78  Identities=21%  Similarity=0.291  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC------------hhhHH----HHHHcCCcee---cCCCCCChhH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFE----EAKKFGVTDF---VNTSEHDRPI  215 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~------------~~~~~----~~~~~g~~~v---v~~~~~~~~~  215 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++            .++.+    .+++.+....   .|..+.+ .+
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v  122 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA-SL  122 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HH
Confidence            4678999987 9999999999999999 88888665            33332    2334454322   3433322 12


Q ss_pred             HHHHHHHhc--CCccEEEeccC
Q 019414          216 QEVIAEMTN--GGVDRSVECTG  235 (341)
Q Consensus       216 ~~~i~~~~~--~~~d~vld~~g  235 (341)
                      .+.+.+...  +++|++|++.|
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCC
Confidence            222222221  37999999887

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.38  E-value=0.026  Score=50.94  Aligned_cols=133  Identities=14%  Similarity=0.191  Sum_probs=80.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|.|+|.|.+|...+..++.. +++.+.+.++++++.+. ++++|+..   +.+    +.+.+.   ...+|+|+.|+..
T Consensus         7 ~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~~----~~~~l~---~~~~D~V~i~tp~   76 (354)
T 3db2_A            7 GVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DAT----MEALLA---REDVEMVIITVPN   76 (354)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CSS----HHHHHH---CSSCCEEEECSCT
T ss_pred             eEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cCC----HHHHhc---CCCCCEEEEeCCh
Confidence            689999999998877777665 66334466777777654 45677643   222    333322   2369999999988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  305 (341)
                      ....+.+..++..  |+-+++.-+-........   ...-.+++.+.-..  ..+....++.+.+++++|.+
T Consensus        77 ~~h~~~~~~al~~--gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~--~~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           77 DKHAEVIEQCARS--GKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGH--SSRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             TSHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEEC--GGGGSHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHHHc--CCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEee--chhcCHHHHHHHHHHhcCCC
Confidence            7788888888886  566777643211111110   01011234333222  22223467888899999876

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=95.36  E-value=0.086  Score=44.40  Aligned_cols=72  Identities=19%  Similarity=0.140  Sum_probs=47.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~--g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      .+.+|||+|+ |.+|...++.+...  |+ +|+++++++++.+.+ ..++.. ..|..+.     +.+.+... ++|+||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~-----~~~~~~~~-~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITDA-----DSINPAFQ-GIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTSH-----HHHHHHHT-TCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCCH-----HHHHHHHc-CCCEEE
Confidence            3568999987 99999999988888  77 899998987765433 112222 1233321     23333332 589999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      ++.|
T Consensus        75 ~~a~   78 (253)
T 1xq6_A           75 ILTS   78 (253)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9876

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.34  E-value=0.046  Score=46.67  Aligned_cols=100  Identities=17%  Similarity=0.259  Sum_probs=66.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCce--ecCCCCCChhHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD--FVNTSEHDRPIQEVIAE  221 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~--vv~~~~~~~~~~~~i~~  221 (341)
                      +.......++.+||-+|+| .|..+..+++.. . .|++++.+++..+.+++.    +...  ++..+..+  +     .
T Consensus        29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~--l-----~   98 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ--M-----P   98 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C--C-----C
T ss_pred             HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh--C-----C
Confidence            3455577889999999986 466777777654 4 999999999888876653    3321  11111111  0     0


Q ss_pred             HhcCCccEEEeccCC------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          222 MTNGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       222 ~~~~~~d~vld~~g~------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ..++.||+|+....-      ...+.++.+.|+|+ |++++..
T Consensus        99 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~  140 (260)
T 1vl5_A           99 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  140 (260)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            122479999865321      35788999999998 9998864

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=95.32  E-value=0.027  Score=48.67  Aligned_cols=77  Identities=19%  Similarity=0.250  Sum_probs=48.5

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhc--CCccE
Q 019414          154 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       154 ~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      ...+.++||+|+ +++|.+.++.+...|+ +|+.+++++++...    ... ...|..+.+ .+.+.+.+...  +++|+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~----~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVN----VSDHFKIDVTNEE-EVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTT----SSEEEECCTTCHH-HHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccC----ceeEEEecCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            446789999987 9999999998888999 88888887664311    111 123443322 12222222221  37999


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      +|++.|.
T Consensus        85 lv~nAg~   91 (269)
T 3vtz_A           85 LVNNAGI   91 (269)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998873

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.31  E-value=0.081  Score=46.99  Aligned_cols=89  Identities=12%  Similarity=0.175  Sum_probs=62.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.++ +.++ +..+++|+.. .    .+  +.+.+.     ..|+|+-++
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~----~~--l~ell~-----~aDvVil~~  210 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H----DS--LDSLLS-----VSQFFSLNA  210 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C----SS--HHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c----CC--HHHHHh-----hCCEEEEec
Confidence            57799999999999999999999998 8999988 7665 3556677642 1    11  333332     278988887


Q ss_pred             CChH----HH-HHHHHHhcCCCcEEEEEcc
Q 019414          235 GNID----NM-ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       235 g~~~----~~-~~~~~~l~~~~g~~v~~g~  259 (341)
                      ...+    .+ +..+..++++ ..++.++.
T Consensus       211 p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          211 PSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             cCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            6321    12 3456778886 77777764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=95.31  E-value=0.077  Score=45.86  Aligned_cols=79  Identities=27%  Similarity=0.319  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-------------ChhhHHH----HHHcCCce---ecCCCCCChh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-------------SSKRFEE----AKKFGVTD---FVNTSEHDRP  214 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-------------~~~~~~~----~~~~g~~~---vv~~~~~~~~  214 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++             +.++.+.    +++.+...   ..|..+.+ .
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~   87 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD-R   87 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-H
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-H
Confidence            4678999987 9999999999989999 8888877             4444332    23334322   23333321 1


Q ss_pred             HHHHHHHHhc--CCccEEEeccCC
Q 019414          215 IQEVIAEMTN--GGVDRSVECTGN  236 (341)
Q Consensus       215 ~~~~i~~~~~--~~~d~vld~~g~  236 (341)
                      +.+.+.+...  +++|+++++.|.
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            2222222221  369999998873

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.31  E-value=0.11  Score=44.97  Aligned_cols=84  Identities=21%  Similarity=0.315  Sum_probs=57.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|.|+|+|.+|.+.+..+...|. .|+++++++++.+.+++.|.. .+..  +    .    .+.  ...|+||.|+.. 
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~--~----~----~~~--~~~D~vi~av~~-   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ--D----L----SLL--QTAKIIFLCTPI-   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES--C----G----GGG--TTCSEEEECSCH-
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC--C----H----HHh--CCCCEEEEECCH-
Confidence            58899999999999988888898 899999999998888887763 1111  1    1    112  358999999865 


Q ss_pred             HHHHHHHHH----hcCCCcEEEEE
Q 019414          238 DNMISAFEC----VHDGWGVAVLV  257 (341)
Q Consensus       238 ~~~~~~~~~----l~~~~g~~v~~  257 (341)
                      ......++.    +.++ ..++.+
T Consensus        68 ~~~~~~~~~l~~~~~~~-~~vv~~   90 (279)
T 2f1k_A           68 QLILPTLEKLIPHLSPT-AIVTDV   90 (279)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEEC
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEEC
Confidence            333333333    3444 455544

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.30  E-value=0.082  Score=45.20  Aligned_cols=77  Identities=12%  Similarity=0.157  Sum_probs=47.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHHHHc----CCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKF----GVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~~~~~----g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+.+ +++..+.+++.    +...   ..|..+.+ .+.+.+.+...  +
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKE-DLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHH-HHHHHHHHHHHHHS
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHhC
Confidence            467899987 9999999998888999 7777744 44444444332    2211   23433322 12222332222  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        85 ~id~lv~~Ag   94 (264)
T 3i4f_A           85 KIDFLINNAG   94 (264)
T ss_dssp             CCCEEECCCC
T ss_pred             CCCEEEECCc
Confidence            7999999988

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=95.30  E-value=0.08  Score=49.49  Aligned_cols=102  Identities=19%  Similarity=0.279  Sum_probs=66.1

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcC
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ...+++|++||=+|+|+ |..++++|+.++ ...|++++.++++.+.+++    +|.. + .....+  ..+ +.....+
T Consensus        96 ~L~~~~g~~VLDlgaGp-G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v-~~~~~D--a~~-l~~~~~~  169 (464)
T 3m6w_A           96 LLDPKPGERVLDLAAAP-GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-L-AVTQAP--PRA-LAEAFGT  169 (464)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-C-EEECSC--HHH-HHHHHCS
T ss_pred             hcCcCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-E-EEEECC--HHH-hhhhccc
Confidence            45678999998877643 555667777654 2489999999999877654    5665 2 222222  222 2222345


Q ss_pred             CccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          226 GVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       226 ~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .||.|+ |  |+|.                         ...++.+++.|+|+ |+++....
T Consensus       170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvysTC  230 (464)
T 3m6w_A          170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPG-GVLVYSTC  230 (464)
T ss_dssp             CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEE-EEEEEEES
T ss_pred             cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            799987 4  3331                         23567788899998 99987543

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.30  E-value=0.016  Score=49.88  Aligned_cols=102  Identities=17%  Similarity=0.258  Sum_probs=68.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCc---eecCCCCCChhHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT---DFVNTSEHDRPIQEVIA  220 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~---~vv~~~~~~~~~~~~i~  220 (341)
                      +.....+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++.    |..   .++..+-.+  +     
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMD--L-----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc--C-----
Confidence            45666788999999999875 7778888888887 999999999887776652    332   111111111  0     


Q ss_pred             HHhcCCccEEEec-----cCC-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          221 EMTNGGVDRSVEC-----TGN-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       221 ~~~~~~~d~vld~-----~g~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ...++.||+|+-.     ... ...++.+.+.|+|+ |++++...
T Consensus       124 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          124 PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            0112479999742     111 34678888999998 99887753

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.29  E-value=0.063  Score=49.39  Aligned_cols=84  Identities=24%  Similarity=0.205  Sum_probs=53.3

Q ss_pred             cCC-CCCCEEEEECC-CHHHHHHHHHHHH-cCCCEEEEEcCChhh----------------HHHHHHcCCcee---cCCC
Q 019414          152 AKP-ERGSSVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSKR----------------FEEAKKFGVTDF---VNTS  209 (341)
Q Consensus       152 ~~~-~~g~~vlI~G~-g~~G~~a~~la~~-~g~~~vv~v~~~~~~----------------~~~~~~~g~~~v---v~~~  209 (341)
                      ..+ +.+.++||+|+ +++|++.+..+.. .|+ +|+.++++.++                .+.+++.|....   .|-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            445 34677899987 8999998777777 899 88888765432                144566665432   2333


Q ss_pred             CCC--hhHHHHHHHHhcCCccEEEeccCC
Q 019414          210 EHD--RPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       210 ~~~--~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +.+  ..+.+.+.+..++++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            322  123444444443579999998765

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.28  E-value=0.067  Score=47.49  Aligned_cols=78  Identities=24%  Similarity=0.278  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC---------ChhhHH----HHHHcCCceecCCCCCCh--hHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR---------SSKRFE----EAKKFGVTDFVNTSEHDR--PIQEVI  219 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~---------~~~~~~----~~~~~g~~~vv~~~~~~~--~~~~~i  219 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++         +.++.+    .+++.+...+.|..+.+.  .+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            3678899987 9999999998888999 8887643         444433    233345444555554431  122333


Q ss_pred             HHHhcCCccEEEeccC
Q 019414          220 AEMTNGGVDRSVECTG  235 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g  235 (341)
                      .+.. +++|++|++.|
T Consensus        87 ~~~~-g~iD~lVnnAG  101 (319)
T 1gz6_A           87 LDTF-GRIDVVVNNAG  101 (319)
T ss_dssp             HHHT-SCCCEEEECCC
T ss_pred             HHHc-CCCCEEEECCC
Confidence            3322 37999999887

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.28  E-value=0.12  Score=44.78  Aligned_cols=88  Identities=19%  Similarity=0.213  Sum_probs=59.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~-~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      +|.|+|+|.+|.+.++.++..|.. .|++.++++++.+.+++.|... ..  .+    ..+.+     . ..|+||.|+.
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~--~~----~~~~~-----~~~aDvVilavp   71 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--TS----IAKVE-----DFSPDFVMLSSP   71 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--SC----GGGGG-----GTCCSEEEECSC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc--CC----HHHHh-----cCCCCEEEEcCC
Confidence            689999999999999988888852 6899999999988888888631 11  11    11111     2 4899999986


Q ss_pred             ChHH---HHHHHHHhcCCCcEEEEEc
Q 019414          236 NIDN---MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~~~---~~~~~~~l~~~~g~~v~~g  258 (341)
                      ....   +.+....+.++ ..++.++
T Consensus        72 ~~~~~~v~~~l~~~l~~~-~iv~~~~   96 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSED-ATVTDQG   96 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHHHHHHhhCCCC-cEEEECC
Confidence            5332   23333445665 6666554

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.28  E-value=0.082  Score=47.34  Aligned_cols=134  Identities=19%  Similarity=0.260  Sum_probs=79.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEE-EEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~-g~~~vv-~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|+|.+|...+..++.. +. .++ ++++++++.+. .+++|...++..      +.+.+.   ...+|+|+.|+.
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~~~------~~~ll~---~~~~D~V~i~tp   73 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAYKD------PHELIE---DPNVDAVLVCSS   73 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEESS------HHHHHH---CTTCCEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCceeCC------HHHHhc---CCCCCEEEEcCC
Confidence            588999999998866665544 56 555 56777777554 566776544321      333222   236999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      .....+.+..++..  |+-+++.-+-........   ...-.+++.+.-..  ..+....++.+.+++++|.+-
T Consensus        74 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           74 TNTHSELVIACAKA--KKHVFCEKPLSLNLADVDRMIEETKKADVILFTGF--NRRFDRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHTTTTS
T ss_pred             CcchHHHHHHHHhc--CCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEee--cccCCHHHHHHHHHHHcCCCC
Confidence            87778888888876  566667643211111110   01112344343222  222234678888999998763

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=95.27  E-value=0.07  Score=49.09  Aligned_cols=134  Identities=16%  Similarity=0.112  Sum_probs=81.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHc---------CCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414          159 SVAVFGLGAVGLAAAEGARIA---------GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~---------g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      +|.|+|+|.+|..-+...+..         +++.|.++++++++.+ .++++|...++..      +.+.+.   ...+|
T Consensus        28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d------~~~ll~---~~~vD   98 (412)
T 4gqa_A           28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGD------WRELVN---DPQVD   98 (412)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESS------HHHHHH---CTTCC
T ss_pred             eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECC------HHHHhc---CCCCC
Confidence            689999999998766655543         3434445566777755 4677888655421      433332   23799


Q ss_pred             EEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc---ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCC
Q 019414          229 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP---INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       229 ~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  305 (341)
                      +|+-|+......+.+..++..  |+-|++.-+-....-....   ..-.+++.+.-..  ..+....++.+-+++++|.|
T Consensus        99 ~V~I~tp~~~H~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G~i  174 (412)
T 4gqa_A           99 VVDITSPNHLHYTMAMAAIAA--GKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAF--NNIKTPAALLAKQIIARGDI  174 (412)
T ss_dssp             EEEECSCGGGHHHHHHHHHHT--TCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEEC--GGGTSHHHHHHHHHHHHTTT
T ss_pred             EEEECCCcHHHHHHHHHHHHc--CCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeecc--ceecCHHHHHHHHHHhcCCc
Confidence            999999887788899999986  6888887432221111100   0012344333222  22223467888899999876

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.26  E-value=0.042  Score=47.60  Aligned_cols=76  Identities=21%  Similarity=0.310  Sum_probs=55.0

Q ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.|.+++|+|.| .+|..+++++...|+ .|+.+.+..+                   +  +.+.++     .+|+||.+
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t~-------------------~--L~~~~~-----~ADIVI~A  211 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFTT-------------------D--LKSHTT-----KADILIVA  211 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS-------------------S--HHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch-------------------h--HHHhcc-----cCCEEEEC
Confidence            478999999975 589999999999999 7777753211                   1  333322     38999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +|.+..+..  +.++++ ..++.+|..
T Consensus       212 vg~p~~I~~--~~vk~G-avVIDvgi~  235 (285)
T 3l07_A          212 VGKPNFITA--DMVKEG-AVVIDVGIN  235 (285)
T ss_dssp             CCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             CCCCCCCCH--HHcCCC-cEEEEeccc
Confidence            988655433  457886 888888754

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=95.26  E-value=0.06  Score=45.45  Aligned_cols=79  Identities=20%  Similarity=0.261  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+ .+++++.+.    +++.+...   ..|..+.+ .+.+.+.+...  
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPE-DVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHH-HHHHHHHHHHHhc
Confidence            3578999987 9999999999888999 78877 566554432    23334322   23433321 12222222211  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++|++.|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.26  E-value=0.053  Score=49.56  Aligned_cols=90  Identities=13%  Similarity=0.054  Sum_probs=62.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.+..+++|+....     +  +.+.+     ...|+|+.++.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~~-----~--l~ell-----~~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWHA-----T--REDMY-----PVCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEECS-----S--HHHHG-----GGCSEEEECSC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceecC-----C--HHHHH-----hcCCEEEEecC
Confidence            57899999999999999999999998 899998887666667777764321     1  32211     13688887765


Q ss_pred             Ch-H---HH-HHHHHHhcCCCcEEEEEcc
Q 019414          236 NI-D---NM-ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~-~---~~-~~~~~~l~~~~g~~v~~g~  259 (341)
                      .. +   .+ +..+..++++ ..++.++.
T Consensus       257 lt~~t~~li~~~~l~~mk~g-ailIN~aR  284 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRG-AYIVNTAR  284 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence            31 1   22 3556677776 77776663

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.26  E-value=0.019  Score=48.50  Aligned_cols=96  Identities=10%  Similarity=0.046  Sum_probs=59.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .+|||+|+ |.+|.+.++.+...| + +|+++.+++++.+.+...++.. ..|..+.     +.+.+... ++|+||++.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~~~~-~~D~vv~~a   96 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVLNH-----AALKQAMQ-GQDIVYANL   96 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTTCH-----HHHHHHHT-TCSEEEEEC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCCCH-----HHHHHHhc-CCCEEEEcC
Confidence            46999986 999999999998889 7 8999988887654322222222 1233321     22333322 589999988


Q ss_pred             CChHH---HHHHHHHhcCC-CcEEEEEccC
Q 019414          235 GNIDN---MISAFECVHDG-WGVAVLVGVP  260 (341)
Q Consensus       235 g~~~~---~~~~~~~l~~~-~g~~v~~g~~  260 (341)
                      +....   .+.+++.+... .++++.++..
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A           97 TGEDLDIQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             CSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence            76332   23344444332 2688888753

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=95.24  E-value=0.072  Score=45.32  Aligned_cols=72  Identities=21%  Similarity=0.236  Sum_probs=48.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhc--CCccEEEec
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSVEC  233 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~--~~~d~vld~  233 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.     ....++..+. ..+.+.+.+...  +++|++|++
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d~-~~v~~~~~~~~~~~g~iD~li~~   94 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSGE-EEIKSVIEKINSKSIKVDTFVCA   94 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSSH-HHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCCH-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            568999987 9999999999999999 89999888765321     1122332222 123333333332  379999998


Q ss_pred             cC
Q 019414          234 TG  235 (341)
Q Consensus       234 ~g  235 (341)
                      .|
T Consensus        95 Ag   96 (251)
T 3orf_A           95 AG   96 (251)
T ss_dssp             CC
T ss_pred             Cc
Confidence            87

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.24  E-value=0.042  Score=47.61  Aligned_cols=76  Identities=24%  Similarity=0.296  Sum_probs=55.6

Q ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.|.+++|+|.| .+|..+++++...|+ .|+.+.+..+                   +  +.+.++     .+|++|.+
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t~-------------------~--L~~~~~-----~ADIVI~A  210 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKTK-------------------D--LSLYTR-----QADLIIVA  210 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS-------------------C--HHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCch-------------------h--HHHHhh-----cCCEEEEC
Confidence            478999999975 589999999999999 7887754321                   1  333322     38999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +|.+..+..  +.++++ ..++.+|..
T Consensus       211 vg~p~~I~~--~~vk~G-avVIDVgi~  234 (285)
T 3p2o_A          211 AGCVNLLRS--DMVKEG-VIVVDVGIN  234 (285)
T ss_dssp             SSCTTCBCG--GGSCTT-EEEEECCCE
T ss_pred             CCCCCcCCH--HHcCCC-eEEEEeccC
Confidence            987655433  457886 888888854

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=95.23  E-value=0.028  Score=45.86  Aligned_cols=95  Identities=18%  Similarity=0.210  Sum_probs=57.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+|||+|+ |.+|...++.+...|. +|+++++++++.+.....+... ..|..+.     +.+.+... ++|+||++.+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~-~~d~vi~~a~   76 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQA-----ADVDKTVA-GQDAVIVLLG   76 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTSH-----HHHHHHHT-TCSEEEECCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceEEEEecCCCH-----HHHHHHHc-CCCEEEECcc
Confidence            57999987 9999999999888898 8999988877643221112221 1233221     22333332 5899999987


Q ss_pred             ChH----------HHHHHHHHhcC-CCcEEEEEcc
Q 019414          236 NID----------NMISAFECVHD-GWGVAVLVGV  259 (341)
Q Consensus       236 ~~~----------~~~~~~~~l~~-~~g~~v~~g~  259 (341)
                      ...          ....+++.+.. +.++++.++.
T Consensus        77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss  111 (206)
T 1hdo_A           77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (206)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEee
Confidence            422          12233333332 2257887764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.23  E-value=0.013  Score=49.86  Aligned_cols=42  Identities=12%  Similarity=0.248  Sum_probs=33.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  200 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~  200 (341)
                      +.++||+|+ |++|.+.++.+.. |. .|+.+++++++.+.+.+.
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~   47 (245)
T 3e9n_A            5 KKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEI   47 (245)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTS
T ss_pred             CCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhh
Confidence            578999987 9999988776654 87 899999998887776653

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.22  E-value=0.067  Score=47.66  Aligned_cols=40  Identities=23%  Similarity=0.174  Sum_probs=33.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE  196 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~-~~~~~~~~  196 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++ +++++.+.
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~   86 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   86 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHH
Confidence            3568899986 9999999999999999 888888 88776554

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=95.22  E-value=0.059  Score=45.38  Aligned_cols=76  Identities=20%  Similarity=0.229  Sum_probs=47.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HHcCCce----ecCCCCCChhHHHHHHHHh--cC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~~----~~~g~~~----vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .++||+|+ |++|.+.++.+...|+ +|+.+ .+++++.+.+    ++.+...    ..|..+.+ .+.+.+.+..  -+
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAE-AATALVHQAAEVLG   79 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHH-HHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHH-HHHHHHHHHHHhcC
Confidence            47899987 9999999988888998 78777 7887765433    2234321    12333321 1222222221  13


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        80 ~~d~li~~Ag   89 (245)
T 2ph3_A           80 GLDTLVNNAG   89 (245)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.22  E-value=0.074  Score=46.40  Aligned_cols=78  Identities=22%  Similarity=0.295  Sum_probs=50.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC--CEEEEEcCChhhHHHHHH-c-----CCce---ecCCCCCChhHHHHHHHHhc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGA--SRIIGVDRSSKRFEEAKK-F-----GVTD---FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~--~~vv~v~~~~~~~~~~~~-~-----g~~~---vv~~~~~~~~~~~~i~~~~~  224 (341)
                      +.++||+|+ +++|.+.++.+...|+  .+|+.+++++++.+.+.+ +     +...   ..|..+.+ .+.+.+.+...
T Consensus        33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~  111 (287)
T 3rku_A           33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAE-KIKPFIENLPQ  111 (287)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGG-GHHHHHHTSCG
T ss_pred             CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH-HHHHHHHHHHH
Confidence            678999987 9999998776665554  288888899887665432 2     3321   23444332 24444444332


Q ss_pred             --CCccEEEeccC
Q 019414          225 --GGVDRSVECTG  235 (341)
Q Consensus       225 --~~~d~vld~~g  235 (341)
                        +++|++|++.|
T Consensus       112 ~~g~iD~lVnnAG  124 (287)
T 3rku_A          112 EFKDIDILVNNAG  124 (287)
T ss_dssp             GGCSCCEEEECCC
T ss_pred             hcCCCCEEEECCC
Confidence              37999999887

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.22  E-value=0.018  Score=49.20  Aligned_cols=34  Identities=24%  Similarity=0.418  Sum_probs=29.4

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  193 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~  193 (341)
                      ++||+|+ |++|.+.++.+...|+ +|+.+++++++
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~   37 (257)
T 1fjh_A            3 IIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAE   37 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchh
Confidence            6899987 9999999998888999 88888887654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.21  E-value=0.13  Score=44.66  Aligned_cols=41  Identities=27%  Similarity=0.412  Sum_probs=36.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  199 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~  199 (341)
                      .+|.|+|+|.+|...++.+...|+ .|+..++++++.+.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            479999999999999999999999 99999999988776654

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.20  E-value=0.068  Score=50.75  Aligned_cols=79  Identities=20%  Similarity=0.276  Sum_probs=51.5

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh----H---HHHHHcCCcee---cCCCCCChhHHHHHHHH
Q 019414          154 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR----F---EEAKKFGVTDF---VNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       154 ~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~----~---~~~~~~g~~~v---v~~~~~~~~~~~~i~~~  222 (341)
                      ++++.++||+|+ |++|...+..+...|+.+|+.+.++...    .   +.+++.|....   .|..+.+ .+.+.+.+ 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~-~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERD-ALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHH-HHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHH-HHHHHHhc-
Confidence            567889999986 9999999888888898678888777532    2   23344565321   2333321 12222222 


Q ss_pred             hcCCccEEEeccCC
Q 019414          223 TNGGVDRSVECTGN  236 (341)
Q Consensus       223 ~~~~~d~vld~~g~  236 (341)
                        +++|.||++.|.
T Consensus       334 --~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 --YPPNAVFHTAGI  345 (511)
T ss_dssp             --SCCSEEEECCCC
T ss_pred             --CCCcEEEECCcc
Confidence              579999999873

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.20  E-value=0.087  Score=43.27  Aligned_cols=96  Identities=11%  Similarity=0.016  Sum_probs=62.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CC---------------ce--e--cCCC
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV---------------TD--F--VNTS  209 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~---------------~~--v--v~~~  209 (341)
                      ....+.++.+||.+|+|. |..+..+++. |+ .|++++.+++..+.+++. +.               ..  .  -|..
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            344677899999998764 6667777776 88 999999999998888763 11               11  1  1222


Q ss_pred             CCChhHHHHHHHHhcCCccEEEeccC----C----hHHHHHHHHHhcCCCcEEEEE
Q 019414          210 EHDRPIQEVIAEMTNGGVDRSVECTG----N----IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       210 ~~~~~~~~~i~~~~~~~~d~vld~~g----~----~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      +..  +..      .+.||+|++...    .    ...++.+.+.|+|+ |+++++
T Consensus        93 ~l~--~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~  139 (203)
T 1pjz_A           93 ALT--ARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI  139 (203)
T ss_dssp             SST--HHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred             cCC--ccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            211  110      136999996321    1    12467888999998 984433

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.19  E-value=0.069  Score=45.79  Aligned_cols=80  Identities=16%  Similarity=0.253  Sum_probs=50.4

Q ss_pred             CCCCCEEEEEC-C--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce--ecCCCCCChhHHHHHHHHhc
Q 019414          154 PERGSSVAVFG-L--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD--FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       154 ~~~g~~vlI~G-~--g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~--vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ..++.++||+| +  +++|.+.++.+...|+ +|+.++++++..+.++    +.+...  ..|..+.+ .+.+.+.+...
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~   88 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDA-QIDALFASLKT   88 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHH-HHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHH-HHHHHHHHHHH
Confidence            34678899997 4  6999999988888999 8888888765544433    333222  23333322 12222222211


Q ss_pred             --CCccEEEeccC
Q 019414          225 --GGVDRSVECTG  235 (341)
Q Consensus       225 --~~~d~vld~~g  235 (341)
                        +++|++|++.|
T Consensus        89 ~~g~id~lv~nAg  101 (271)
T 3ek2_A           89 HWDSLDGLVHSIG  101 (271)
T ss_dssp             HCSCEEEEEECCC
T ss_pred             HcCCCCEEEECCc
Confidence              37999999876

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.19  E-value=0.036  Score=48.88  Aligned_cols=99  Identities=15%  Similarity=0.097  Sum_probs=63.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--------ceecCCCCCChhHHHHHHHHhcCC
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--------~~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      .++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-.        .++ .....+  ..+.+....++.
T Consensus        94 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v-~~~~~D--~~~~~~~~~~~~  169 (304)
T 3bwc_A           94 PKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRA-TVRVGD--GLAFVRQTPDNT  169 (304)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEESC--HHHHHHSSCTTC
T ss_pred             CCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE-EEEECc--HHHHHHhccCCc
Confidence            5678999998753 5666777776555599999999998888876321        111 111122  333332213458


Q ss_pred             ccEEEe-ccCC---------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          227 VDRSVE-CTGN---------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       227 ~d~vld-~~g~---------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ||+|+- ....         .+.++.+.+.|+++ |.++...
T Consensus       170 fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  210 (304)
T 3bwc_A          170 YDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQG  210 (304)
T ss_dssp             EEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence            999884 3210         35688899999998 9998874

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=95.17  E-value=0.041  Score=47.59  Aligned_cols=95  Identities=18%  Similarity=0.191  Sum_probs=59.5

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          159 SVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~--g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      +|||+|+ |.+|...++.+...  |+ +|++++++.++.+.+...++..+ .|..+.     +.+.+... ++|+||++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~-----~~l~~~~~-~~d~vi~~a   74 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQP-----ESLQKAFA-GVSKLLFIS   74 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTTCH-----HHHHHHTT-TCSEEEECC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccCCH-----HHHHHHHh-cCCEEEEcC
Confidence            5899987 99999998888777  87 88888888777665555555432 233321     23333333 589999988


Q ss_pred             CCh-------HHHHHHHHHhcCC-CcEEEEEccC
Q 019414          235 GNI-------DNMISAFECVHDG-WGVAVLVGVP  260 (341)
Q Consensus       235 g~~-------~~~~~~~~~l~~~-~g~~v~~g~~  260 (341)
                      +..       .....+++.+... .++++.++..
T Consensus        75 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           75 GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             CCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            741       1222334444332 1478887653

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.17  E-value=0.047  Score=45.98  Aligned_cols=73  Identities=25%  Similarity=0.263  Sum_probs=46.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee--cCCCCCCh--hHHHHHHHHhc-CCccEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDR--PIQEVIAEMTN-GGVDRS  230 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v--v~~~~~~~--~~~~~i~~~~~-~~~d~v  230 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+     +....  .|..+.+.  .+.+.+.+..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            457899987 9999999999999999 8888888876532     11111  12221110  12222333332 479999


Q ss_pred             EeccC
Q 019414          231 VECTG  235 (341)
Q Consensus       231 ld~~g  235 (341)
                      |++.|
T Consensus        77 v~~Ag   81 (236)
T 1ooe_A           77 FCVAG   81 (236)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.16  E-value=0.044  Score=46.85  Aligned_cols=75  Identities=20%  Similarity=0.337  Sum_probs=47.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce---ecCCCCCCh--hHHHHHHHHhcCCccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD---FVNTSEHDR--PIQEVIAEMTNGGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~~~d~  229 (341)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.++++.+  +..++++...   ..|..+.+.  .+.+.+.+  .+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGE--DVVADLGDRARFAAADVTDEAAVASALDLAET--MGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCH--HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence            3578999987 9999999988888899 8888877544  3344555432   234333220  12222222  247999


Q ss_pred             EEeccC
Q 019414          230 SVECTG  235 (341)
Q Consensus       230 vld~~g  235 (341)
                      ++++.|
T Consensus        83 lv~nAg   88 (257)
T 3tl3_A           83 VVNCAG   88 (257)
T ss_dssp             EEECGG
T ss_pred             EEECCC
Confidence            999987

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.16  E-value=0.028  Score=48.19  Aligned_cols=97  Identities=15%  Similarity=0.044  Sum_probs=61.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCC--------------------ceecCCCCC
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--------------------TDFVNTSEH  211 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~--------------------~~vv~~~~~  211 (341)
                      ...++.+||..|+|. |..+..+|+. |+ .|++++.+++..+.+++ .+.                    ..+ .....
T Consensus        65 ~~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~  140 (252)
T 2gb4_A           65 KGQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSI-SLYCC  140 (252)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSE-EEEES
T ss_pred             cCCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCce-EEEEC
Confidence            346789999999864 6777777765 88 99999999999988864 321                    111 01011


Q ss_pred             ChhHHHHHHHHhc-CCccEEEeccC-----C---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          212 DRPIQEVIAEMTN-GGVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       212 ~~~~~~~i~~~~~-~~~d~vld~~g-----~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +  +.+ + .... +.||+|++...     .   ...++.+.+.|+|+ |+++++.
T Consensus       141 D--~~~-l-~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~  191 (252)
T 2gb4_A          141 S--IFD-L-PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV  191 (252)
T ss_dssp             C--TTT-G-GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             c--ccc-C-CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence            1  100 0 1112 47999997422     1   13577888999998 9986543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.16  E-value=0.051  Score=47.47  Aligned_cols=78  Identities=19%  Similarity=0.247  Sum_probs=55.5

Q ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.|.+++|+|.| .+|..+++++...|+ .|+.+.+.....+                   +.+.++     .+|+||.+
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~l~-------------------l~~~~~-----~ADIVI~A  217 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTSTED-------------------MIDYLR-----TADIVIAA  217 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCHHH-------------------HHHHHH-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch-------------------hhhhhc-----cCCEEEEC
Confidence            478999999975 589999999999999 7888865322111                   002222     37999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +|.+..+..  ..++++ ..++.++..
T Consensus       218 vg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          218 MGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             SCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             CCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            988655443  347887 888888854

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.16  E-value=0.089  Score=45.82  Aligned_cols=97  Identities=15%  Similarity=0.103  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc---eecCCCCCChhHHHHHHHHhcC
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~---~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      .+.++.+||-+|+| .|..+..+++..|. .|++++.+++..+.+++    .|..   .++..+-.+  +     ...++
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----~~~~~  149 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE--I-----PCEDN  149 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS--C-----SSCTT
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc--C-----CCCCC
Confidence            77899999999986 47778888887788 99999999988777654    3331   111111111  0     01124


Q ss_pred             CccEEEeccC-----C-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          226 GVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       226 ~~d~vld~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .||+|+-...     . ...+..+.+.|+|+ |++++...
T Consensus       150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            7999985422     1 35688999999998 99988754

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=95.14  E-value=0.094  Score=44.85  Aligned_cols=78  Identities=17%  Similarity=0.282  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.    +++.+...   ..|..+.+ .+.+.+.+...  
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAA-EVEAAISAAADKF   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHh
Confidence            4678999987 9999999998888999 77776 555554433    23334322   23333321 12222222222  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|+++++.|
T Consensus        85 g~id~lv~nAg   95 (259)
T 3edm_A           85 GEIHGLVHVAG   95 (259)
T ss_dssp             CSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999876

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.13  E-value=0.029  Score=48.07  Aligned_cols=67  Identities=19%  Similarity=0.227  Sum_probs=47.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .+ +++|+|+|++|.+++..+...|+++|+++.++.+|.+.+.+ ++.   ....    +..+.+     ..+|+||+|+
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~~----~~~~~~-----~~aDiVInat  174 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSLD----QLDEVV-----KKAKSLFNTT  174 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEGG----GHHHHH-----HTCSEEEECS
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCHH----HHHhhh-----cCCCEEEECC
Confidence            46 99999999999999999999998789999999887654322 221   1111    122222     2489999987


Q ss_pred             C
Q 019414          235 G  235 (341)
Q Consensus       235 g  235 (341)
                      +
T Consensus       175 p  175 (253)
T 3u62_A          175 S  175 (253)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.13  E-value=0.037  Score=47.33  Aligned_cols=73  Identities=23%  Similarity=0.271  Sum_probs=47.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHh--cCCccEEEe
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT--NGGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~--~~~~d~vld  232 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.     +. ...|..+.+ .+.+.+.+..  .+++|++|+
T Consensus        21 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d~~-~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           21 SRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITDTE-QVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTSHH-HHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence            578999987 9999999998888999 88888887655321     11 123433322 1222222221  136999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus        94 nAg~   97 (253)
T 2nm0_A           94 NAGV   97 (253)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            8773

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.12  E-value=0.04  Score=47.50  Aligned_cols=92  Identities=14%  Similarity=0.089  Sum_probs=62.9

Q ss_pred             ccccchhhhhhhhhhcCCCCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhH
Q 019414          137 LSCGVSTGLGATLNVAKPERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI  215 (341)
Q Consensus       137 l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~  215 (341)
                      +||+.......+.+ .. -.|.+++|+|.| .+|..+++++...|+ .|+.+.+..                   .+  +
T Consensus       132 ~PcTp~gv~~lL~~-~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~t-------------------~~--L  187 (276)
T 3ngx_A          132 VPATPRAVIDIMDY-YG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSKT-------------------KD--I  187 (276)
T ss_dssp             CCHHHHHHHHHHHH-HT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------SC--H
T ss_pred             CCCcHHHHHHHHHH-hC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCCc-------------------cc--H
Confidence            44443333433333 34 689999999975 699999999999999 788875421                   11  4


Q ss_pred             HHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          216 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       216 ~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      .+.+++     .|++|.++|.+..+..  ..++++ ..++.+|..
T Consensus       188 ~~~~~~-----ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~  224 (276)
T 3ngx_A          188 GSMTRS-----SKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN  224 (276)
T ss_dssp             HHHHHH-----SSEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred             HHhhcc-----CCEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence            444444     7999999988655443  346886 888888754

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.11  E-value=0.072  Score=46.03  Aligned_cols=90  Identities=17%  Similarity=0.183  Sum_probs=61.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      .+|||+|+|.+|...+..+...|+ .|+++++++++.+.+...++..+ .|..+    +.       -.++|+||++.+.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d----~~-------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEE----PS-------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSSC----CC-------CTTCCEEEECCCC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEecccc----cc-------cCCCCEEEECCCc
Confidence            479999999999999998888898 89999999998887777666543 23322    11       2479999998864


Q ss_pred             h----HHHHHHHHHhcC---CCcEEEEEcc
Q 019414          237 I----DNMISAFECVHD---GWGVAVLVGV  259 (341)
Q Consensus       237 ~----~~~~~~~~~l~~---~~g~~v~~g~  259 (341)
                      .    .....+++.+..   +..+++.++.
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            2    222333444332   2257777653

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=95.10  E-value=0.056  Score=50.12  Aligned_cols=103  Identities=14%  Similarity=0.247  Sum_probs=67.0

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce-ecCCCCCChhHHHHHHHHhc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ....+++|++||=.|+|+ |..+.++++..+...|++++.++++.+.+++    +|... ++..+..+  +..   ...+
T Consensus       240 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~--~~~---~~~~  313 (429)
T 1sqg_A          240 TWLAPQNGEHILDLCAAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY--PSQ---WCGE  313 (429)
T ss_dssp             HHHCCCTTCEEEEESCTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC--THH---HHTT
T ss_pred             HHcCCCCcCeEEEECCCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhh--chh---hccc
Confidence            445778999999998765 6667777777653499999999998877654    45432 22222111  211   1223


Q ss_pred             CCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          225 GGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       225 ~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +.||.|+ |  |+|.                         ...++.+++.|+|+ |+++....
T Consensus       314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG-G~lvystc  375 (429)
T 1sqg_A          314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYATC  375 (429)
T ss_dssp             CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEES
T ss_pred             CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence            4799987 4  4442                         14467788889997 99887653

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.10  E-value=0.08  Score=46.20  Aligned_cols=40  Identities=23%  Similarity=0.174  Sum_probs=33.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc-CChhhHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE  196 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~-~~~~~~~~  196 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++ +++++.+.
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~   49 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   49 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHH
Confidence            3568899986 9999999999989999 888888 88776543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.10  E-value=0.062  Score=46.13  Aligned_cols=78  Identities=24%  Similarity=0.299  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++ ++++.+.    +++.+...   ..|..+.+ .+.+.+.+...  
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPS-EVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHc
Confidence            3678999987 9999999998888999 7888877 6655433    23345432   23433321 12222222211  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        98 ~~~d~vi~~Ag  108 (274)
T 1ja9_A           98 GGLDFVMSNSG  108 (274)
T ss_dssp             SCEEEEECCCC
T ss_pred             CCCCEEEECCC
Confidence            36999999876

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.09  E-value=0.065  Score=47.75  Aligned_cols=134  Identities=14%  Similarity=0.022  Sum_probs=79.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEE-EEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~-g~~~vv-~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|+|.+|...+..++.. ++ .++ +.+++.++.+ .++++|...++  .+    +.+.+.   ...+|+|+.|+.
T Consensus         7 ~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~--~~----~~~ll~---~~~~D~V~i~tp   76 (330)
T 3e9m_A            7 RYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAY--GS----YEELCK---DETIDIIYIPTY   76 (330)
T ss_dssp             EEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCB--SS----HHHHHH---CTTCSEEEECCC
T ss_pred             EEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCcee--CC----HHHHhc---CCCCCEEEEcCC
Confidence            688999999998877777765 56 555 5566766654 45667764332  11    333222   236999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      .....+.+..++..  |+-+++.-+.........   ...-.+++.+.-..  ..+....++.+.+++++|.+-
T Consensus        77 ~~~h~~~~~~al~~--gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG  146 (330)
T 3e9m_A           77 NQGHYSAAKLALSQ--GKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQ--KSVFLPITQKVKATIQEGGLG  146 (330)
T ss_dssp             GGGHHHHHHHHHHT--TCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECC--SGGGCHHHHHHHHHHHTTTTC
T ss_pred             CHHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEE--hhhhCHHHHHHHHHHhCCCCC
Confidence            87788888888886  566666543211111100   00011233333222  222224578888999998763

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=95.09  E-value=0.061  Score=45.41  Aligned_cols=74  Identities=16%  Similarity=0.236  Sum_probs=47.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee--cCCCCCC--hhHHHHHHHHhc-CCccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHD--RPIQEVIAEMTN-GGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v--v~~~~~~--~~~~~~i~~~~~-~~~d~  229 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+     +....  .|..+.+  ..+.+.+.+..+ +++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            4678999987 9999999998888899 8888888776532     11111  1222111  012223333332 47999


Q ss_pred             EEeccC
Q 019414          230 SVECTG  235 (341)
Q Consensus       230 vld~~g  235 (341)
                      +|++.|
T Consensus        80 lv~~Ag   85 (241)
T 1dhr_A           80 ILCVAG   85 (241)
T ss_dssp             EEECCC
T ss_pred             EEEccc
Confidence            999887

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.09  E-value=0.058  Score=46.96  Aligned_cols=79  Identities=18%  Similarity=0.139  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHH-H----HcCCce---ecCCCCC---ChhHHHHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEA-K----KFGVTD---FVNTSEH---DRPIQEVIAEM  222 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~~~-~----~~g~~~---vv~~~~~---~~~~~~~i~~~  222 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++ ++.+.+ +    +.+...   ..|..+.   ...+.+.+.+.
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            3567899987 9999999998888899 888888887 554332 2    234321   2344431   11122222222


Q ss_pred             h--cCCccEEEeccC
Q 019414          223 T--NGGVDRSVECTG  235 (341)
Q Consensus       223 ~--~~~~d~vld~~g  235 (341)
                      .  .+++|++|++.|
T Consensus       101 ~~~~g~iD~lvnnAG  115 (288)
T 2x9g_A          101 FRAFGRCDVLVNNAS  115 (288)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHhcCCCCEEEECCC
Confidence            1  137999999887

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.08  E-value=0.061  Score=44.91  Aligned_cols=98  Identities=16%  Similarity=0.247  Sum_probs=64.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-eecCCCCCChhHHHHHHHHhcCC
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      ..++++++||=+|+|..|..++.+++..+. +|++++.+++..+.+++    .+.. .++..+...      .....++.
T Consensus        51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~------~~~~~~~~  123 (230)
T 3evz_A           51 TFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGI------IKGVVEGT  123 (230)
T ss_dssp             TTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCS------STTTCCSC
T ss_pred             hhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchh------hhhcccCc
Confidence            346789999999888668888888887666 99999999998877664    3431 122111000      01112247


Q ss_pred             ccEEEeccCC-------------------------hHHHHHHHHHhcCCCcEEEEE
Q 019414          227 VDRSVECTGN-------------------------IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       227 ~d~vld~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ||+|+-....                         ...++.+.+.|+|+ |+++++
T Consensus       124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence            9999832110                         34577788888997 888775

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.07  E-value=0.11  Score=46.58  Aligned_cols=75  Identities=17%  Similarity=0.204  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHH-cC---Cce-ecCCCCCChhHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FG---VTD-FVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~-~g---~~~-vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      .+.+|||+|+ |.+|...++.+... |..+|+++++++.+.+.+.+ +.   +.. ..|..+.     +.+.+... ++|
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~-----~~l~~~~~-~~D   93 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL-----ERLNYALE-GVD   93 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH-----HHHHHHTT-TCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH-----HHHHHHHh-cCC
Confidence            3678999986 99999998888777 86689999898887665433 32   211 1233321     23333333 699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +||++.+.
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.07  E-value=0.062  Score=46.56  Aligned_cols=77  Identities=21%  Similarity=0.331  Sum_probs=56.4

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.|.+++|+|. +.+|..+++++...|+ .|+.+.+..+                   +  +.+.++     .+|++|.+
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T~-------------------~--L~~~~~-----~ADIVI~A  211 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFTR-------------------D--LADHVS-----RADLVVVA  211 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTCS-------------------C--HHHHHH-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCCc-------------------C--HHHHhc-----cCCEEEEC
Confidence            47899999997 5699999999999999 7877754211                   1  333333     38999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +|.+..+..  +.++++ ..++.+|...
T Consensus       212 vg~p~~I~~--~~vk~G-avVIDvgi~~  236 (286)
T 4a5o_A          212 AGKPGLVKG--EWIKEG-AIVIDVGINR  236 (286)
T ss_dssp             CCCTTCBCG--GGSCTT-CEEEECCSCS
T ss_pred             CCCCCCCCH--HHcCCC-eEEEEecccc
Confidence            988655443  457887 8888888643

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.06  E-value=0.097  Score=46.32  Aligned_cols=101  Identities=24%  Similarity=0.375  Sum_probs=65.8

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCce--ecCCCCCChhHHHHHHHH
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~--vv~~~~~~~~~~~~i~~~  222 (341)
                      ....+++|++||=+|+|. |..++.+++..+ ...|++++.++++.+.+++    +|...  ++..+..+  +.    . 
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~--~~----~-  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLH--IG----E-  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGG--GG----G-
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhh--cc----c-
Confidence            345788999999888653 556667777653 3499999999998877654    46532  22211111  11    1 


Q ss_pred             hcCCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 TNGGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~~~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+.||.|+ |  |+|.                         ...++.+++.|+++ |+++....
T Consensus       184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~stc  247 (315)
T 1ixk_A          184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTC  247 (315)
T ss_dssp             GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            234799987 4  3331                         25677899999998 99988654

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=95.05  E-value=0.12  Score=46.00  Aligned_cols=73  Identities=18%  Similarity=0.237  Sum_probs=47.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHHc-------CCcee-cCCCCCChhHHHHHHHHh
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKF-------GVTDF-VNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~----~~~~~~~~-------g~~~v-v~~~~~~~~~~~~i~~~~  223 (341)
                      +.+|||+|+ |.+|...++.+...|+ .|++++++..    ..+.+++.       ++..+ .|..+     .+.+.+..
T Consensus        25 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----~~~~~~~~   98 (351)
T 3ruf_A           25 PKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD-----LTTCEQVM   98 (351)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC-----HHHHHHHT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC-----HHHHHHHh
Confidence            568999987 9999999999988998 8888888543    33333332       22221 23322     12333333


Q ss_pred             cCCccEEEeccCC
Q 019414          224 NGGVDRSVECTGN  236 (341)
Q Consensus       224 ~~~~d~vld~~g~  236 (341)
                      . ++|+||++.+.
T Consensus        99 ~-~~d~Vih~A~~  110 (351)
T 3ruf_A           99 K-GVDHVLHQAAL  110 (351)
T ss_dssp             T-TCSEEEECCCC
T ss_pred             c-CCCEEEECCcc
Confidence            3 69999999874

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.05  E-value=0.045  Score=47.71  Aligned_cols=98  Identities=14%  Similarity=0.110  Sum_probs=63.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--------ceecCCCCCChhHHHHHHHHhcCC
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--------~~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      .++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-.        .++ .....+  ..+.+.. ..+.
T Consensus        77 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v-~~~~~D--~~~~l~~-~~~~  151 (283)
T 2i7c_A           77 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRV-NVFIED--ASKFLEN-VTNT  151 (283)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTE-EEEESC--HHHHHHH-CCSC
T ss_pred             CCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcE-EEEECC--hHHHHHh-CCCC
Confidence            4568999998653 5566667776555599999999999998887321        111 111112  3333333 2458


Q ss_pred             ccEEEe-ccC---C------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          227 VDRSVE-CTG---N------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       227 ~d~vld-~~g---~------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ||+|+- ...   .      .+.++.+.+.|+++ |.++...
T Consensus       152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~  192 (283)
T 2i7c_A          152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  192 (283)
T ss_dssp             EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEC
Confidence            999874 321   1      35678899999998 9998774

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.04  E-value=0.039  Score=47.69  Aligned_cols=78  Identities=32%  Similarity=0.422  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+    ++.+...   ..|..+.+ .+.+.+.+...  +
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPK-SVEETISQQEKDFG  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHH-HHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHH-HHHHHHHHHHHHhC
Confidence            3678999987 9999999888888899 888888877654433    2234321   13433321 12222222211  3


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            6999999876

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.03  E-value=0.059  Score=43.98  Aligned_cols=62  Identities=29%  Similarity=0.438  Sum_probs=42.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      ++||+|+ |.+|.+.++.+. .|+ +|+.++++++          ....|..+.+ .+.+.+.+.  +++|++|++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~~~-~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITNID-SIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTCHH-HHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCCHH-HHHHHHHHh--CCCCEEEECCC
Confidence            6999987 999999988888 898 8888887754          1223333321 133333332  46899999887

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.02  E-value=0.025  Score=49.63  Aligned_cols=45  Identities=18%  Similarity=0.166  Sum_probs=39.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  203 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~  203 (341)
                      .+|.|+|.|.+|...++.+...|. .|++.++++++.+.+.+.|+.
T Consensus        16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~   60 (296)
T 3qha_A           16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGAT   60 (296)
T ss_dssp             CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTCE
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCE
Confidence            369999999999999888888898 899999999998888887764

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.02  E-value=0.046  Score=45.95  Aligned_cols=104  Identities=17%  Similarity=0.227  Sum_probs=66.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      +.......++.+||-+|+|. |..+..+++. |...+++++.+++..+.+++.....-+.....+  +.+ . ....+.+
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d--~~~-~-~~~~~~f  108 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERAD--LDK-L-HLPQDSF  108 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECC--GGG-C-CCCTTCE
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcC--hhh-c-cCCCCCc
Confidence            34455667889999998764 6666666665 655899999999999988875432101111111  110 0 0112479


Q ss_pred             cEEEeccC------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          228 DRSVECTG------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       228 d~vld~~g------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      |+|+-...      ....++.+.+.|+|+ |++++..
T Consensus       109 D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          109 DLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            99985432      134678889999998 9988764

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.01  E-value=0.061  Score=45.92  Aligned_cols=78  Identities=26%  Similarity=0.371  Sum_probs=48.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHH----cCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF-EEAKK----FGVTD---FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~-~~~~~----~g~~~---vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      +.++||+|+ |++|.+.++.+...|+ +|+.++++.++. +.+++    .+...   ..|..+.+ .+.+.+.+..  -+
T Consensus        14 ~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           14 NKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTD-IVTKTIQQIDADLG   91 (265)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHH-HHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHH-HHHHHHHHHHHhcC
Confidence            567999987 9999999998888998 888888854432 22222    24322   23433321 1222233322  13


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus        92 ~id~li~~Ag~  102 (265)
T 1h5q_A           92 PISGLIANAGV  102 (265)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999998873

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.01  E-value=0.059  Score=46.01  Aligned_cols=100  Identities=16%  Similarity=0.121  Sum_probs=63.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHH-HhcCCcc
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAE-MTNGGVD  228 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~-~~~~~~d  228 (341)
                      ..++.+||=+|+|. |..++.+|+.....+|++++.++++.+.+++    +|...+ .....+  +.+.... ...+.||
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v-~~~~~d--~~~~~~~~~~~~~fD  153 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGA-RALWGR--AEVLAREAGHREAYA  153 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSE-EEEECC--HHHHTTSTTTTTCEE
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCce-EEEECc--HHHhhcccccCCCce
Confidence            46788999888753 6666777777644499999999999887664    455432 111122  2221110 1124799


Q ss_pred             EEEe-ccCC-hHHHHHHHHHhcCCCcEEEEEc
Q 019414          229 RSVE-CTGN-IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       229 ~vld-~~g~-~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|+- ++.. ...++.+.+.|+++ |+++.+-
T Consensus       154 ~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~  184 (249)
T 3g89_A          154 RAVARAVAPLCVLSELLLPFLEVG-GAAVAMK  184 (249)
T ss_dssp             EEEEESSCCHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             EEEECCcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence            9984 3332 34667788899998 9988764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.00  E-value=0.067  Score=45.62  Aligned_cols=78  Identities=19%  Similarity=0.326  Sum_probs=48.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCChhhHHHHHH-cCCce---ecCCCCCChhHHHHHHHHhc--CCc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGV  227 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g--~~~vv~v~~~~~~~~~~~~-~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~  227 (341)
                      |.++||+|+ +++|.+.++.+...|  + .|+.+++++++.+.+.+ ++...   ..|..+.+ .+.+.+.+...  +++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDS-VLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHH-HHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHhcCCc
Confidence            467899987 999999887666654  5 88888899887665443 44322   23443322 12222222211  379


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+++++.|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999998874

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=94.98  E-value=0.065  Score=45.15  Aligned_cols=77  Identities=25%  Similarity=0.314  Sum_probs=48.0

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~-v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      |.++||+|+ |++|...++.+...|+ +|+. ..+++++.+.+    ++.+...   ..|..+.+ .+.+.+.+..  .+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEA-DVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHH-HHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHH-HHHHHHHHHHHHcC
Confidence            457899986 9999999999989999 7777 57777665433    2234322   13333321 1222222221  13


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|++|++.|
T Consensus        79 ~id~li~~Ag   88 (244)
T 1edo_A           79 TIDVVVNNAG   88 (244)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999877

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=94.94  E-value=0.15  Score=46.05  Aligned_cols=133  Identities=17%  Similarity=0.180  Sum_probs=76.0

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~-a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|.|+|+|.+|.. .+..++.. +++.+.++++++++.+  ++++...++  .+    +.+.+.   +..+|+|+.|+..
T Consensus         9 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~--~~----~~~ll~---~~~~D~V~i~tp~   77 (364)
T 3e82_A            9 NIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK--RDLPDVTVI--AS----PEAAVQ---HPDVDLVVIASPN   77 (364)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--HHCTTSEEE--SC----HHHHHT---CTTCSEEEECSCG
T ss_pred             eEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--hhCCCCcEE--CC----HHHHhc---CCCCCEEEEeCCh
Confidence            6899999999985 66666554 6733345566666543  445433332  11    332221   2379999999988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCccccccc---ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP---INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      ....+.+.+++..  |+-|++.-+-.........   ..-.+++.+.-.  ...+....++.+.+++++|.+-
T Consensus        78 ~~H~~~~~~al~a--Gk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~--~~~r~~p~~~~~~~~i~~g~iG  146 (364)
T 3e82_A           78 ATHAPLARLALNA--GKHVVVDKPFTLDMQEARELIALAEEKQRLLSVF--HNRRWDSDYLGIRQVIEQGTLG  146 (364)
T ss_dssp             GGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC--CCCTTCHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHC--CCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE--eecccCHHHHHHHHHHHcCCCc
Confidence            7788888888886  6777776432111111100   001233433322  2222234578888999988763

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=94.94  E-value=0.065  Score=43.94  Aligned_cols=97  Identities=13%  Similarity=0.090  Sum_probs=64.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc----eecCCCCCChhHHHHHHHHhcCCccE
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      +.++.+||-+|+|. |..+..+++. |...+++++.+++..+.+++....    .++..+..+  +     ...++.+|+
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~--~-----~~~~~~fD~  110 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK--L-----DFPSASFDV  110 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS--C-----CSCSSCEEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc--C-----CCCCCcccE
Confidence            47889999999865 7777777765 444899999999999888774321    111111111  0     112347999


Q ss_pred             EEeccC---------------------ChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          230 SVECTG---------------------NIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       230 vld~~g---------------------~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      |+....                     ....++.+.+.|+++ |++++....
T Consensus       111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~  161 (215)
T 2pxx_A          111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTSA  161 (215)
T ss_dssp             EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeCC
Confidence            985211                     135678888999998 999988654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.94  E-value=0.14  Score=43.83  Aligned_cols=86  Identities=9%  Similarity=0.095  Sum_probs=56.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|.|+|+|.+|...++.+...|...|.+.++++++.+.+.+ +|+...-+..+           .. ...|+||.|+...
T Consensus        12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~-~~~Dvvi~av~~~   79 (266)
T 3d1l_A           12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAE-----------VN-PYAKLYIVSLKDS   79 (266)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGG-----------SC-SCCSEEEECCCHH
T ss_pred             eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHH-----------Hh-cCCCEEEEecCHH
Confidence            69999999999998888877898448889999888776654 46542211111           11 2589999999764


Q ss_pred             HHHHHHHHHhc----CCCcEEEEEc
Q 019414          238 DNMISAFECVH----DGWGVAVLVG  258 (341)
Q Consensus       238 ~~~~~~~~~l~----~~~g~~v~~g  258 (341)
                       .....++.+.    ++ ..++.+.
T Consensus        80 -~~~~v~~~l~~~~~~~-~ivv~~s  102 (266)
T 3d1l_A           80 -AFAELLQGIVEGKREE-ALMVHTA  102 (266)
T ss_dssp             -HHHHHHHHHHTTCCTT-CEEEECC
T ss_pred             -HHHHHHHHHHhhcCCC-cEEEECC
Confidence             3344444433    43 4555553

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=94.93  E-value=0.14  Score=47.77  Aligned_cols=103  Identities=21%  Similarity=0.292  Sum_probs=65.8

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcC
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ...+++|++||=+|+|+ |..++++|... +...|++++.++++.+.+++    +|...+... ..+  ..+ +....++
T Consensus       100 ~L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~-~~D--a~~-l~~~~~~  174 (456)
T 3m4x_A          100 AAAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVT-NHA--PAE-LVPHFSG  174 (456)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEE-CCC--HHH-HHHHHTT
T ss_pred             HcCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEE-eCC--HHH-hhhhccc
Confidence            44678999988887643 44455666654 33499999999999876654    676543211 122  222 2222345


Q ss_pred             CccEEE-e--ccCCh-------------------------HHHHHHHHHhcCCCcEEEEEcc
Q 019414          226 GVDRSV-E--CTGNI-------------------------DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       226 ~~d~vl-d--~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .||.|+ |  |+|..                         +.+..+++.|+|+ |+++....
T Consensus       175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC  235 (456)
T 3m4x_A          175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK-GQLIYSTC  235 (456)
T ss_dssp             CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE-EEEEEEES
T ss_pred             cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            799987 5  44421                         4577888999998 99987544

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=94.92  E-value=0.015  Score=49.48  Aligned_cols=75  Identities=24%  Similarity=0.279  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHh--cCCccEEEe
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT--NGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~--~~~~d~vld  232 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.  +  ...|..+.+ .+.+.+.+..  .+++|++|+
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~~~-~~~~~~~~~~~~~g~id~lv~   87 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTDSD-AVDRAFTAVEEHQGPVEVLVS   87 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTCHH-HHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence            4678999987 9999999998888999 8888888766543221  1  233444322 1222222221  136999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus        88 ~Ag~   91 (247)
T 1uzm_A           88 NAGL   91 (247)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            8873

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=94.92  E-value=0.093  Score=43.98  Aligned_cols=102  Identities=19%  Similarity=0.161  Sum_probs=62.4

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhh----HHHHHHcCCceecCCCCCChhHHHHHHHHhc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKR----FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~----~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ....++++++||-+|+|. |..+..+++..| ..+|++++.+++.    .+.++....-..+..+..+  ..  ......
T Consensus        71 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~--~~--~~~~~~  145 (233)
T 2ipx_A           71 DQIHIKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARH--PH--KYRMLI  145 (233)
T ss_dssp             SCCCCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTC--GG--GGGGGC
T ss_pred             heecCCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCC--hh--hhcccC
Confidence            345678899999999875 788888888864 2499999999653    3444443111122111111  00  001123


Q ss_pred             CCccEEEeccCCh-H---HHHHHHHHhcCCCcEEEEE
Q 019414          225 GGVDRSVECTGNI-D---NMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       225 ~~~d~vld~~g~~-~---~~~~~~~~l~~~~g~~v~~  257 (341)
                      +.+|+|+-....+ .   .+..+.+.|+|+ |+++..
T Consensus       146 ~~~D~V~~~~~~~~~~~~~~~~~~~~Lkpg-G~l~i~  181 (233)
T 2ipx_A          146 AMVDVIFADVAQPDQTRIVALNAHTFLRNG-GHFVIS  181 (233)
T ss_dssp             CCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CcEEEEEEcCCCccHHHHHHHHHHHHcCCC-eEEEEE
Confidence            4799998543332 1   256788999998 988773

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=94.91  E-value=0.25  Score=44.56  Aligned_cols=90  Identities=14%  Similarity=0.093  Sum_probs=59.6

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHcCCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEecc
Q 019414          158 SSVAVFGLGAVGL-AAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECT  234 (341)
Q Consensus       158 ~~vlI~G~g~~G~-~a~~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~  234 (341)
                      =+|.|+|+|.++. ..+..++..+++.+.++++++++.+ .++++|...++.  +    +.+    +... .+|+|+.|+
T Consensus        27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~--~----~~~----ll~~~~vD~V~I~t   96 (361)
T 3u3x_A           27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIA--T----AEE----ILEDENIGLIVSAA   96 (361)
T ss_dssp             CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEES--C----HHH----HHTCTTCCEEEECC
T ss_pred             cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccC--C----HHH----HhcCCCCCEEEEeC
Confidence            3689999887774 3344445678845556677777755 456677433331  1    332    2233 699999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ......+.+..++..  |+-|++.-
T Consensus        97 p~~~H~~~~~~al~a--GkhVl~EK  119 (361)
T 3u3x_A           97 VSSERAELAIRAMQH--GKDVLVDK  119 (361)
T ss_dssp             CHHHHHHHHHHHHHT--TCEEEEES
T ss_pred             ChHHHHHHHHHHHHC--CCeEEEeC
Confidence            877778888888886  67788864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=94.91  E-value=0.024  Score=48.68  Aligned_cols=75  Identities=19%  Similarity=0.290  Sum_probs=47.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+..   .+.. ..|..+.+ .+.+.+.+...  +++|+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DIHTVAGDISKPE-TADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TEEEEESCTTSHH-HHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ceEEEEccCCCHH-HHHHHHHHHHHHCCCCCEEE
Confidence            3578999987 9999999999889999 888888876543211   1111 22333321 12222222211  3799999


Q ss_pred             eccC
Q 019414          232 ECTG  235 (341)
Q Consensus       232 d~~g  235 (341)
                      ++.|
T Consensus       102 ~nAg  105 (260)
T 3un1_A          102 NNAG  105 (260)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9887

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=94.91  E-value=0.087  Score=46.95  Aligned_cols=135  Identities=12%  Similarity=0.079  Sum_probs=79.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC---CCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          159 SVAVFGLGAVGLAAAEGARIAG---ASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g---~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      +|.|+|+|.+|...+..++..+   ++.+.+.+++.++.+ .++++|...++.  +    +.+.+.   +..+|+|+.|+
T Consensus         4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~--~----~~~ll~---~~~vD~V~i~t   74 (334)
T 3ohs_X            4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYG--S----YEELAK---DPNVEVAYVGT   74 (334)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEES--S----HHHHHH---CTTCCEEEECC
T ss_pred             EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccC--C----HHHHhc---CCCCCEEEECC
Confidence            5889999999988776666543   323445566766654 456677754431  1    333222   23699999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      ......+.+.+++..  |+-|++.-+-....-...   ...-.+++.+.-...  .+....++.+.+++++|++-
T Consensus        75 p~~~H~~~~~~al~~--GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~--~r~~p~~~~~k~~i~~g~iG  145 (334)
T 3ohs_X           75 QHPQHKAAVMLCLAA--GKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIW--TRFFPASEALRSVLAQGTLG  145 (334)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECG--GGGSHHHHHHHHHHHHTTTC
T ss_pred             CcHHHHHHHHHHHhc--CCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEh--HhcCHHHHHHHHHHhcCCCC
Confidence            887788888888886  677777643211111100   010123443432221  22224578888889888763

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=94.91  E-value=0.028  Score=47.04  Aligned_cols=95  Identities=18%  Similarity=0.095  Sum_probs=65.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eecCCCCCChhHHHHHHHHh-cCCccEEE
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT-NGGVDRSV  231 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~vv~~~~~~~~~~~~i~~~~-~~~~d~vl  231 (341)
                      +.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++.... .++..+-.+ .+     ... ++.||+|+
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~-~~-----~~~~~~~fD~v~  116 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGKG-EL-----PAGLGAPFGLIV  116 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSCS-SC-----CTTCCCCEEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchhh-cc-----CCcCCCCEEEEE
Confidence            36789999998764 6667777766 76 999999999999988875321 111111100 00     012 34799999


Q ss_pred             eccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          232 ECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       232 d~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ........+..+.+.|+|+ |+++..+
T Consensus       117 ~~~~~~~~l~~~~~~Lkpg-G~l~~~~  142 (226)
T 3m33_A          117 SRRGPTSVILRLPELAAPD-AHFLYVG  142 (226)
T ss_dssp             EESCCSGGGGGHHHHEEEE-EEEEEEE
T ss_pred             eCCCHHHHHHHHHHHcCCC-cEEEEeC
Confidence            7655557888999999998 9998443

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=94.91  E-value=0.042  Score=47.72  Aligned_cols=97  Identities=21%  Similarity=0.130  Sum_probs=63.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC------C--ceecCCCCCChhHHHHHHHHhcCCc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V--TDFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g------~--~~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      .+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .  .++- ....|  ..+.+.. ..+.|
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~-v~~~D--~~~~l~~-~~~~f  149 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVD-VQVDD--GFMHIAK-SENQY  149 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEE-EEESC--SHHHHHT-CCSCE
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceE-EEECc--HHHHHhh-CCCCe
Confidence            468999998753 556667777667669999999999988887631      1  1110 00111  2222322 23479


Q ss_pred             cEEEe-ccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          228 DRSVE-CTG---------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       228 d~vld-~~g---------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      |+|+- ...         ..+.++.+.+.|+++ |.++...
T Consensus       150 D~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          150 DVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             EEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             eEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            99874 322         136788999999998 9998874

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=94.91  E-value=0.075  Score=44.79  Aligned_cols=78  Identities=17%  Similarity=0.233  Sum_probs=48.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCC------EEEEEcCChhhHHHHH-Hc---CCce---ecCCCCCChhHHHHHHHH
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGAS------RIIGVDRSSKRFEEAK-KF---GVTD---FVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~------~vv~v~~~~~~~~~~~-~~---g~~~---vv~~~~~~~~~~~~i~~~  222 (341)
                      +.++||+|+ |++|.+.++.+...|+.      +|+.+++++++.+.+. ++   +...   ..|..+.+ .+.+.+.+.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMA-DVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHH-HHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHH-HHHHHHHHH
Confidence            457899987 99999998888888874      7888888887765433 22   3321   13333321 122222222


Q ss_pred             h--cCCccEEEeccC
Q 019414          223 T--NGGVDRSVECTG  235 (341)
Q Consensus       223 ~--~~~~d~vld~~g  235 (341)
                      .  .+++|++|++.|
T Consensus        81 ~~~~g~id~li~~Ag   95 (244)
T 2bd0_A           81 VERYGHIDCLVNNAG   95 (244)
T ss_dssp             HHHTSCCSEEEECCC
T ss_pred             HHhCCCCCEEEEcCC
Confidence            1  137999999887

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.90  E-value=0.067  Score=45.42  Aligned_cols=97  Identities=18%  Similarity=0.145  Sum_probs=67.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce---ecCCCCCChhHHHHHHHHhc
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ..+.++.+||-+|+|. |..+..+++..+. +|++++.+++..+.+++    .|...   ++..+-.+  +     ...+
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----~~~~  112 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN--L-----PFQN  112 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----SSCT
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh--C-----CCCC
Confidence            4678899999999874 8888899998877 99999999988877654    34321   11111111  0     0112


Q ss_pred             CCccEEEec-----cCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRSVEC-----TGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~vld~-----~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.||+|+-.     ......++.+.+.|+|+ |++++..
T Consensus       113 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          113 EELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             TCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            479999742     22345788899999998 9998875

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=94.90  E-value=0.049  Score=47.32  Aligned_cols=71  Identities=15%  Similarity=0.082  Sum_probs=47.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|.|+|+|.+|...+..+.. |. .|++.++++++.+.+.+.|+... +   ..        +.. ...|+||.|+..+.
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~-~---~~--------~~~-~~~D~vi~~v~~~~   67 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA-V---PL--------ERV-AEARVIFTCLPTTR   67 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE-C---CG--------GGG-GGCSEEEECCSSHH
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc-C---HH--------HHH-hCCCEEEEeCCChH
Confidence            58899999999988777767 98 78999999888877766554321 1   10        000 13677777776654


Q ss_pred             HHHHHH
Q 019414          239 NMISAF  244 (341)
Q Consensus       239 ~~~~~~  244 (341)
                      .+...+
T Consensus        68 ~~~~v~   73 (289)
T 2cvz_A           68 EVYEVA   73 (289)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            344433

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=94.90  E-value=0.036  Score=49.28  Aligned_cols=71  Identities=23%  Similarity=0.319  Sum_probs=46.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|||+|+ |.+|...++.+...|+ +|++++++..+.+.+.+.++..+ .|..+.     +.+.+... ++|+||++.+.
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~-----~~~~~~~~-~~d~vih~a~~   87 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRVAEMLDH-----AGLERALR-GLDGVIFSAGY   87 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEECCTTCH-----HHHHHHTT-TCSEEEEC---
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEEecCCCH-----HHHHHHHc-CCCEEEECCcc
Confidence            7999987 9999999998888898 89998888766543333344322 233221     23333333 59999998873

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.90  E-value=0.29  Score=41.69  Aligned_cols=34  Identities=32%  Similarity=0.407  Sum_probs=30.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      +.+|+|+|+|++|..++..+...|..++..++.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            5789999999999999999999999888888654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=94.89  E-value=0.028  Score=46.94  Aligned_cols=63  Identities=14%  Similarity=0.253  Sum_probs=43.1

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +.++||+|+ +++|.+.++.+...|+ +|+.++++++             .|..+.+ .+.+.+.++  +++|+++++.|
T Consensus         6 ~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~~~-~v~~~~~~~--g~id~lv~nAg   68 (223)
T 3uce_A            6 KTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISDEK-SVYHYFETI--GAFDHLIVTAG   68 (223)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTCHH-HHHHHHHHH--CSEEEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCCHH-HHHHHHHHh--CCCCEEEECCC
Confidence            567899987 9999999988888898 8888877654             2333221 122223322  46899998877


Q ss_pred             C
Q 019414          236 N  236 (341)
Q Consensus       236 ~  236 (341)
                      .
T Consensus        69 ~   69 (223)
T 3uce_A           69 S   69 (223)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=94.88  E-value=0.073  Score=46.39  Aligned_cols=74  Identities=20%  Similarity=0.245  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc----CCce-ecCCCCCChhHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVTD-FVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~-vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      +|.++||+| +|++|.+++..+...|+ +|+.+.++.++.+.+ +++    +... ..|..+.     +.+.+... .+|
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~-~~D  190 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-----ASRAEAVK-GAH  190 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-----HHHHHHTT-TCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH-----HHHHHHHH-hCC
Confidence            578999999 59999999999999999 688888987775543 332    2221 2233221     12333222 489


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      ++++++|.
T Consensus       191 vlVn~ag~  198 (287)
T 1lu9_A          191 FVFTAGAI  198 (287)
T ss_dssp             EEEECCCT
T ss_pred             EEEECCCc
Confidence            99999863

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=94.87  E-value=0.26  Score=42.90  Aligned_cols=74  Identities=24%  Similarity=0.247  Sum_probs=52.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+...   .  +  ..+.+.     ..|+||-|+..+.
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~~Dvvi~~vp~~~   68 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQVV---S--S--PADVAE-----KADRIITMLPTSI   68 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEEC---S--S--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeec---C--C--HHHHHh-----cCCEEEEeCCCHH
Confidence            48899999999998888888898 78999999998888877665321   1  1  322222     2688888886655


Q ss_pred             HHHHHHH
Q 019414          239 NMISAFE  245 (341)
Q Consensus       239 ~~~~~~~  245 (341)
                      .++..+.
T Consensus        69 ~~~~v~~   75 (296)
T 2gf2_A           69 NAIEAYS   75 (296)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555554

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=94.85  E-value=0.055  Score=47.26  Aligned_cols=77  Identities=18%  Similarity=0.227  Sum_probs=56.3

Q ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.|.+++|+|.| .+|.-+++++...|+ .|+.+.+..                   .+  +.+.++     .+|+||-+
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t-------------------~~--L~~~~~-----~ADIVI~A  215 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT-------------------AH--LDEEVN-----KGDILVVA  215 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC-------------------SS--HHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECCc-------------------cc--HHHHhc-----cCCEEEEC
Confidence            478999999987 689999999999999 788775331                   11  333332     38999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                      +|.+..+..  ..++++ ..++.++...
T Consensus       216 vg~p~~I~~--~~vk~G-avVIDVgi~~  240 (301)
T 1a4i_A          216 TGQPEMVKG--EWIKPG-AIVIDCGINY  240 (301)
T ss_dssp             CCCTTCBCG--GGSCTT-CEEEECCCBC
T ss_pred             CCCcccCCH--HHcCCC-cEEEEccCCC
Confidence            998655433  336787 8999998643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=94.84  E-value=0.062  Score=46.27  Aligned_cols=75  Identities=19%  Similarity=0.191  Sum_probs=46.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh--hHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~--~~~~~i~~~~~~~~d~vld  232 (341)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++. ..+.+  ....|..+.+.  .+.+.+.+.. +++|++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~-G~iDilVn   84 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-LPEEL--FVEADLTTKEGCAIVAEATRQRL-GGVDVIVH   84 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-SCTTT--EEECCTTSHHHHHHHHHHHHHHT-SSCSEEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-CCcEE--EEEcCCCCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence            5788999986 8999999999999999 888888865421 00111  11233333220  1222333322 37999999


Q ss_pred             ccC
Q 019414          233 CTG  235 (341)
Q Consensus       233 ~~g  235 (341)
                      +.|
T Consensus        85 nAG   87 (261)
T 4h15_A           85 MLG   87 (261)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            776

>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}

Probab=94.82  E-value=0.028  Score=51.14  Aligned_cols=91  Identities=23%  Similarity=0.300  Sum_probs=51.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHHHHcCCce---ecCCCCCChhHHHHHHHHhcCCc
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~---~~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      .-+|.+||-+|+|. |.+++ +|...|+++|++++.++-   .++.++..|...   ++.-...+  +      ..++++
T Consensus        81 ~~~~k~VLDvG~Gt-GiLs~-~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~--~------~lpe~~  150 (376)
T 4hc4_A           81 ALRGKTVLDVGAGT-GILSI-FCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVET--V------ELPEQV  150 (376)
T ss_dssp             HHTTCEEEEETCTT-SHHHH-HHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT--C------CCSSCE
T ss_pred             hcCCCEEEEeCCCc-cHHHH-HHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeee--e------cCCccc
Confidence            44788999998753 55544 444579889999998751   123344455532   22111111  1      123479


Q ss_pred             cEEEe-ccCC--------hHHHHHHHHHhcCCCcEEE
Q 019414          228 DRSVE-CTGN--------IDNMISAFECVHDGWGVAV  255 (341)
Q Consensus       228 d~vld-~~g~--------~~~~~~~~~~l~~~~g~~v  255 (341)
                      |+|+- ..+.        +..+...-+.|+|+ |.++
T Consensus       151 DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~-G~~i  186 (376)
T 4hc4_A          151 DAIVSEWMGYGLLHESMLSSVLHARTKWLKEG-GLLL  186 (376)
T ss_dssp             EEEECCCCBTTBTTTCSHHHHHHHHHHHEEEE-EEEE
T ss_pred             cEEEeecccccccccchhhhHHHHHHhhCCCC-ceEC
Confidence            99983 2221        12344445788897 8764

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=94.80  E-value=0.13  Score=46.67  Aligned_cols=134  Identities=15%  Similarity=0.173  Sum_probs=80.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHc--------CCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcC-Ccc
Q 019414          159 SVAVFGLGAVGLAAAEGARIA--------GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  228 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~--------g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d  228 (341)
                      +|.|+|+|.+|..-+...+..        +++.+.++++++++.+ .++++|...++..      +.    ++... .+|
T Consensus         8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d------~~----~ll~~~~iD   77 (390)
T 4h3v_A            8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETD------WR----TLLERDDVQ   77 (390)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESC------HH----HHTTCTTCS
T ss_pred             cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCC------HH----HHhcCCCCC
Confidence            588999999997655544432        2234555667777755 4667887655421      32    23333 799


Q ss_pred             EEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccc------eeeecceEEEeeecCCCCCCCHHHHHHHHHC
Q 019414          229 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI------NVLNERTLKGTFFGNYKPRTDLPSVVDMYMN  302 (341)
Q Consensus       229 ~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  302 (341)
                      +|+-|+....+.+.+..++..  |+-|++.-+-....-.....      .-.+++.+.-...  .+....++.+.+++++
T Consensus        78 aV~I~tP~~~H~~~~~~al~a--GkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~--~R~~p~~~~~k~~i~~  153 (390)
T 4h3v_A           78 LVDVCTPGDSHAEIAIAALEA--GKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFT--YRRVPAIALARKLVAD  153 (390)
T ss_dssp             EEEECSCGGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECG--GGGSHHHHHHHHHHHT
T ss_pred             EEEEeCChHHHHHHHHHHHHc--CCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEee--eccCchHHHHHHHHHc
Confidence            999999887888899999986  68888874432211111000      0112333332222  2222468888899999


Q ss_pred             CCCC
Q 019414          303 KQLE  306 (341)
Q Consensus       303 ~~i~  306 (341)
                      |.|-
T Consensus       154 g~iG  157 (390)
T 4h3v_A          154 GKIG  157 (390)
T ss_dssp             TSSC
T ss_pred             CCCC
Confidence            8773

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=94.80  E-value=0.095  Score=45.72  Aligned_cols=72  Identities=21%  Similarity=0.317  Sum_probs=47.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-------hhHHHHH---HcCCcee-cCCCCCChhHHHHHHHHhcC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-------KRFEEAK---KFGVTDF-VNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-------~~~~~~~---~~g~~~v-v~~~~~~~~~~~~i~~~~~~  225 (341)
                      .+|||+|+ |.+|...+..+...|+ .|++++++.       ++.+.++   ..++..+ .|..+.     +.+.+... 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~-----~~l~~~~~-   75 (307)
T 2gas_A            3 NKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDH-----ETLVKAIK-   75 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCH-----HHHHHHHT-
T ss_pred             cEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCH-----HHHHHHHh-
Confidence            56999997 9999999988888898 788887876       5544333   3455432 344332     22333332 


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+||++.+.
T Consensus        76 ~~d~vi~~a~~   86 (307)
T 2gas_A           76 QVDIVICAAGR   86 (307)
T ss_dssp             TCSEEEECSSS
T ss_pred             CCCEEEECCcc
Confidence            59999999874

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.80  E-value=0.29  Score=44.13  Aligned_cols=89  Identities=15%  Similarity=0.177  Sum_probs=59.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      -+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+...   .  +  ..+.+...  ...|+||-++...
T Consensus        23 mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~---~--s--~~e~~~~a--~~~DvVi~~vp~~   92 (358)
T 4e21_A           23 MQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGA---R--S--IEEFCAKL--VKPRVVWLMVPAA   92 (358)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCC---S--S--HHHHHHHS--CSSCEEEECSCGG
T ss_pred             CEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEe---C--C--HHHHHhcC--CCCCEEEEeCCHH
Confidence            579999999999999999999998 99999999999888887765321   1  1  33333221  1357888877654


Q ss_pred             HHHHHHHH----HhcCCCcEEEEEc
Q 019414          238 DNMISAFE----CVHDGWGVAVLVG  258 (341)
Q Consensus       238 ~~~~~~~~----~l~~~~g~~v~~g  258 (341)
                       .+...++    .+.++ ..++..+
T Consensus        93 -~v~~vl~~l~~~l~~g-~iiId~s  115 (358)
T 4e21_A           93 -VVDSMLQRMTPLLAAN-DIVIDGG  115 (358)
T ss_dssp             -GHHHHHHHHGGGCCTT-CEEEECS
T ss_pred             -HHHHHHHHHHhhCCCC-CEEEeCC
Confidence             3333333    33443 4555544

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=94.80  E-value=0.19  Score=42.13  Aligned_cols=95  Identities=8%  Similarity=0.042  Sum_probs=60.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      ....+++|.|+|.+|...++.++..|.  |+++++++++.+.++ .+...+. -+..+   .+.+++..-.++|.++-++
T Consensus         7 ~~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~~~~~i~-gd~~~---~~~l~~a~i~~ad~vi~~~   79 (234)
T 2aef_A            7 AKSRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKKVLR-SGANFVH-GDPTR---VSDLEKANVRGARAVIVDL   79 (234)
T ss_dssp             ---CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-TTCEEEE-SCTTC---HHHHHHTTCTTCSEEEECC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-cCCeEEE-cCCCC---HHHHHhcCcchhcEEEEcC
Confidence            456789999999999988888877776  888999988887777 6654332 22222   1233333223799999998


Q ss_pred             CChHH---HHHHHHHhcCCCcEEEEE
Q 019414          235 GNIDN---MISAFECVHDGWGVAVLV  257 (341)
Q Consensus       235 g~~~~---~~~~~~~l~~~~g~~v~~  257 (341)
                      +..+.   +....+.+.+. .+++.-
T Consensus        80 ~~d~~n~~~~~~a~~~~~~-~~iia~  104 (234)
T 2aef_A           80 ESDSETIHCILGIRKIDES-VRIIAE  104 (234)
T ss_dssp             SCHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             CCcHHHHHHHHHHHHHCCC-CeEEEE
Confidence            87432   22344555554 455544

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=94.78  E-value=0.14  Score=45.82  Aligned_cols=91  Identities=16%  Similarity=0.136  Sum_probs=62.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      .+|.|+|.|.+|.+.+..++..|. .|++.++++++.+.++++|+...-     +  ..+.+.+. ....|+||-|+.. 
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~~-----~--~~e~~~~a-~~~aDlVilavP~-   78 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVSA-----D--LEATLQRA-AAEDALIVLAVPM-   78 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEES-----C--HHHHHHHH-HHTTCEEEECSCH-
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeeeC-----C--HHHHHHhc-ccCCCEEEEeCCH-
Confidence            469999999999999999999998 899999999999999999874221     1  33333221 1146899988864 


Q ss_pred             HHHHHHHH---HhcCCCcEEEEEcc
Q 019414          238 DNMISAFE---CVHDGWGVAVLVGV  259 (341)
Q Consensus       238 ~~~~~~~~---~l~~~~g~~v~~g~  259 (341)
                      ..+...++   .+.++ ..++.++.
T Consensus        79 ~~~~~vl~~l~~~~~~-~iv~Dv~S  102 (341)
T 3ktd_A           79 TAIDSLLDAVHTHAPN-NGFTDVVS  102 (341)
T ss_dssp             HHHHHHHHHHHHHCTT-CCEEECCS
T ss_pred             HHHHHHHHHHHccCCC-CEEEEcCC
Confidence            33333222   23454 56666653

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=94.77  E-value=0.066  Score=45.73  Aligned_cols=77  Identities=13%  Similarity=0.196  Sum_probs=48.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHH---cCCCEEEEEcCChhhHHHHH-Hc-----CCce---ecCCCCCChhHHHHHHHHh
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARI---AGASRIIGVDRSSKRFEEAK-KF-----GVTD---FVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~---~g~~~vv~v~~~~~~~~~~~-~~-----g~~~---vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.++||+|+ |++|.+.++.+..   .|+ +|+.+++++++.+.+. ++     +...   ..|..+.+ .+.+.+.+..
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~   83 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEA-GVQRLLSAVR   83 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHH-HHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHH-HHHHHHHHHH
Confidence            567889987 9999998877776   799 8999999887755432 22     3321   13443322 2333333332


Q ss_pred             c----CCcc--EEEeccC
Q 019414          224 N----GGVD--RSVECTG  235 (341)
Q Consensus       224 ~----~~~d--~vld~~g  235 (341)
                      .    +++|  +++++.|
T Consensus        84 ~~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             hccccccCCccEEEECCc
Confidence            2    3678  9998876

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=94.77  E-value=0.1  Score=45.57  Aligned_cols=45  Identities=29%  Similarity=0.343  Sum_probs=37.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  200 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~  200 (341)
                      .++.+||=+|+|. |..++.+++..+...|++++.++...+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            3678999999864 78888999988655999999999988887763

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=94.75  E-value=0.13  Score=44.02  Aligned_cols=78  Identities=22%  Similarity=0.298  Sum_probs=48.4

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHHHH-cCCcee--cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEAKK-FGVTDF--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~---~~~~~~~~-~g~~~v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+   |++|.+.++.+...|+ +|+.+++++   +..+.+.+ .+....  .|..+.+ .+.+.+.+...  
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDA-SIDTMFAELGKVW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHH-HHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHH-HHHHHHHHHHHHc
Confidence            3578999974   6999999998888999 888888876   22333322 232222  3443322 13333333322  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        86 g~iD~lv~~Ag   96 (265)
T 1qsg_A           86 PKFDGFVHSIG   96 (265)
T ss_dssp             SSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            27999999887

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=94.74  E-value=0.18  Score=45.70  Aligned_cols=91  Identities=18%  Similarity=0.162  Sum_probs=59.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC----hhh---------HHHHHHcCCceecCCCCCChhHHHHHHHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS----SKR---------FEEAKKFGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~----~~~---------~~~~~~~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      ++.+|+|+|+|..|..+++++...|+++|+.++++    .+|         .+++++...   . ....+  +.+.++  
T Consensus       191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~---~-~~~~~--L~eav~--  262 (388)
T 1vl6_A          191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP---E-RLSGD--LETALE--  262 (388)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT---T-CCCSC--HHHHHT--
T ss_pred             CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc---c-Cchhh--HHHHHc--
Confidence            56899999999999999999999999899999988    544         334444321   0 11112  555543  


Q ss_pred             hcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          223 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       223 ~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                         +.|++|-+++.+-.-++.++.++++ ..+..+.
T Consensus       263 ---~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalS  294 (388)
T 1vl6_A          263 ---GADFFIGVSRGNILKPEWIKKMSRK-PVIFALA  294 (388)
T ss_dssp             ---TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECC
T ss_pred             ---cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcC
Confidence               3789988876322234555666665 6554444

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=94.74  E-value=0.21  Score=47.05  Aligned_cols=82  Identities=18%  Similarity=0.268  Sum_probs=52.9

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-------HHHHHHcCCce-e--cCCCCCChhHHHHHHHH
Q 019414          154 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FEEAKKFGVTD-F--VNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       154 ~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-------~~~~~~~g~~~-v--v~~~~~~~~~~~~i~~~  222 (341)
                      ++++.++||+|+ |++|...++.+...|+.+|+.+.++...       .+.+++.|... +  .|..+.+ .+.+.+.+.
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~-~v~~~~~~i  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRE-SVRELLGGI  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHTS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHH-HHHHHHHHH
Confidence            567899999986 9999998888777798668888887642       12345556542 1  2333321 133333333


Q ss_pred             hc-CCccEEEeccCC
Q 019414          223 TN-GGVDRSVECTGN  236 (341)
Q Consensus       223 ~~-~~~d~vld~~g~  236 (341)
                      .. +++|.||++.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence            11 278999999873

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=94.73  E-value=0.12  Score=44.86  Aligned_cols=78  Identities=21%  Similarity=0.279  Sum_probs=47.8

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHHHH-cCCcee--cCCCCCChhHHHHHHHHh--c
Q 019414          156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDF--VNTSEHDRPIQEVIAEMT--N  224 (341)
Q Consensus       156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~~---~~~~~~~-~g~~~v--v~~~~~~~~~~~~i~~~~--~  224 (341)
                      .+.++||+|+   |++|.+.++.+...|+ +|+.++++++   ..+.+.+ .+....  .|..+.+ .+.+.+.+..  -
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDE-DIKNLKKFLEENW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence            3678999985   6999999998888899 8888888775   2222222 332122  3433321 1222222221  1


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        98 g~iD~lv~~Ag  108 (285)
T 2p91_A           98 GSLDIIVHSIA  108 (285)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=94.73  E-value=0.065  Score=46.45  Aligned_cols=76  Identities=17%  Similarity=0.291  Sum_probs=56.0

Q ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~g-~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.|.+++|+|.| .+|.-+++++...|+ .|+.+.+..                   .+  +.+.+++     +|+||-+
T Consensus       157 l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t-------------------~~--L~~~~~~-----ADIVI~A  209 (288)
T 1b0a_A          157 TFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT-------------------KN--LRHHVEN-----ADLLIVA  209 (288)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC-------------------SC--HHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHHCCC-eEEEEeCCc-------------------hh--HHHHhcc-----CCEEEEC
Confidence            478999999986 589999999999998 788775332                   11  4444444     7999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +|.+..+..-  .++++ ..++.+|..
T Consensus       210 vg~p~lI~~~--~vk~G-avVIDVgi~  233 (288)
T 1b0a_A          210 VGKPGFIPGD--WIKEG-AIVIDVGIN  233 (288)
T ss_dssp             SCCTTCBCTT--TSCTT-CEEEECCCE
T ss_pred             CCCcCcCCHH--HcCCC-cEEEEccCC
Confidence            9986544332  36786 888888854

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=94.72  E-value=0.14  Score=46.21  Aligned_cols=87  Identities=21%  Similarity=0.247  Sum_probs=57.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++. +.+...+.|+...      +  +.+.+.     ..|+|+-++.
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~~------~--l~ell~-----~aDvV~l~~P  239 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEPA------S--LEDVLT-----KSDFIFVVAA  239 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEEC------C--HHHHHH-----SCSEEEECSC
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeeeC------C--HHHHHh-----cCCEEEEcCc
Confidence            47899999999999999999999998 899998775 4445556665421      1  332222     2677776544


Q ss_pred             Ch-H---HH-HHHHHHhcCCCcEEEEEc
Q 019414          236 NI-D---NM-ISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~-~---~~-~~~~~~l~~~~g~~v~~g  258 (341)
                      .. +   .+ ...+..++++ +.++.++
T Consensus       240 lt~~T~~li~~~~l~~mk~g-ailIN~a  266 (365)
T 4hy3_A          240 VTSENKRFLGAEAFSSMRRG-AAFILLS  266 (365)
T ss_dssp             SSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred             CCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence            21 1   11 3456667775 7776665

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=94.72  E-value=0.12  Score=45.25  Aligned_cols=68  Identities=22%  Similarity=0.160  Sum_probs=45.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+|||+|+ |.+|...++.+...|. +|+++++++.+.+ ++  ++..+ .|..      .+.+.+... ++|+||++.+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~~~~~Dl~------~~~~~~~~~-~~d~Vih~a~   71 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYEYRVSDYT------LEDLINQLN-DVDAVVHLAA   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCEEEECCCC------HHHHHHHTT-TCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceEEEEcccc------HHHHHHhhc-CCCEEEEccc
Confidence            47999986 9999999999999998 8999988855554 43  44322 2222      233444433 7999999876


Q ss_pred             C
Q 019414          236 N  236 (341)
Q Consensus       236 ~  236 (341)
                      .
T Consensus        72 ~   72 (311)
T 3m2p_A           72 T   72 (311)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=94.72  E-value=0.08  Score=46.66  Aligned_cols=99  Identities=14%  Similarity=0.170  Sum_probs=63.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--------ceecCCCCCChhHHHHHHHHhcC
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--------~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ...+.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.-.        .++ .....+  ..+.+.. ..+
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv-~v~~~D--a~~~l~~-~~~  167 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKL-TLHVGD--GFEFMKQ-NQD  167 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEESC--HHHHHHT-CSS
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE-EEEECc--HHHHHhh-CCC
Confidence            34568999998753 5666777776555599999999999888876311        111 111122  3332322 344


Q ss_pred             CccEEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          226 GVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       226 ~~d~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .||+|+ |...         ..+.++.+.+.|+++ |.++...
T Consensus       168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  209 (304)
T 2o07_A          168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  209 (304)
T ss_dssp             CEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence            799998 4432         124688899999998 9988764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=94.69  E-value=0.16  Score=44.16  Aligned_cols=73  Identities=22%  Similarity=0.231  Sum_probs=48.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcC-CCEEEEEcCChhhH--HHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRF--EEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g-~~~vv~v~~~~~~~--~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      ..+|||+|+ |.+|...++.+...| + +|++++++.++.  +.+...++..+ .|..+.     +.+.+... ++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~-----~~l~~~~~-~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQ-----VIMELALN-GAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTTCH-----HHHHHHHT-TCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCCCH-----HHHHHHHh-cCCEEE
Confidence            357999997 999999988887778 7 888888887653  33444565433 233331     22333332 599999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      .+.+.
T Consensus        78 ~~a~~   82 (299)
T 2wm3_A           78 IVTNY   82 (299)
T ss_dssp             ECCCH
T ss_pred             EeCCC
Confidence            98863

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=94.67  E-value=0.13  Score=44.30  Aligned_cols=79  Identities=18%  Similarity=0.153  Sum_probs=49.0

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc-
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      ..+.++||+|+ |++|.+.++.+...|+ +|+.+ .++.++.+.+    ++.+...   ..|..+.+ .+.+.+.+... 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~  101 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAA-DIAAMFSAVDRQ  101 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHh
Confidence            35678999987 9999999999999999 66554 7777665443    3334432   12333321 12222222221 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|++|++.|
T Consensus       102 ~g~id~li~nAg  113 (272)
T 4e3z_A          102 FGRLDGLVNNAG  113 (272)
T ss_dssp             HSCCCEEEECCC
T ss_pred             CCCCCEEEECCC
Confidence             37999999877

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=94.67  E-value=0.034  Score=51.96  Aligned_cols=103  Identities=18%  Similarity=0.270  Sum_probs=66.4

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCcee--cCCCCCChhHHHHHHHH
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~v--v~~~~~~~~~~~~i~~~  222 (341)
                      ....+++|++||-+|+|+ |..+..+++..+- ..|++++.++++.+.+++    +|.+.+  +..+..+  +.   ..+
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~--~~---~~~  326 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARK--AP---EII  326 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTC--CS---SSS
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhh--cc---hhh
Confidence            345788999999888765 6667777877642 499999999999876654    465432  2111111  10   001


Q ss_pred             hcCCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 TNGGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~~~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .++.||.|+ |  |+|.                         ...++.+++.|+|+ |+++....
T Consensus       327 ~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvy~tc  390 (450)
T 2yxl_A          327 GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG-GRLLYTTC  390 (450)
T ss_dssp             CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE-EEEEEEES
T ss_pred             ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            114699987 4  4432                         23577888889997 99987654

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=94.63  E-value=0.24  Score=44.21  Aligned_cols=87  Identities=18%  Similarity=0.142  Sum_probs=61.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+++.++.  +++. +.    +.+ +  +.+.+.     ..|+|+.++.
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~----~~~-~--l~ell~-----~aDvV~l~~p  208 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GY----YVD-S--LDDLYK-----QADVISLHVP  208 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TC----BCS-C--HHHHHH-----HCSEEEECSC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Ce----ecC-C--HHHHHh-----hCCEEEEcCC
Confidence            46789999999999999999999999 899998877654  2332 32    111 1  333332     2799998876


Q ss_pred             ChH-H---H-HHHHHHhcCCCcEEEEEcc
Q 019414          236 NID-N---M-ISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~-~---~-~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..+ +   + +..+..++++ +.++.++.
T Consensus       209 ~~~~t~~li~~~~l~~mk~g-a~lIn~ar  236 (333)
T 1j4a_A          209 DVPANVHMINDESIAKMKQD-VVIVNVSR  236 (333)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CcHHHHHHHhHHHHhhCCCC-cEEEECCC
Confidence            422 1   2 3567788887 88888864

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.63  E-value=0.16  Score=47.35  Aligned_cols=87  Identities=9%  Similarity=0.038  Sum_probs=52.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCcee--cCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v--v~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      +.+|+|+|+|.+|.+.+..+...|+ +|++++++.++.+.+.+ ++....  +|..+    . +.+.+.. .++|+|+++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d----~-~~l~~~l-~~~DvVIn~   75 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND----D-AALDAEV-AKHDLVISL   75 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTC----H-HHHHHHH-TTSSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCC----H-HHHHHHH-cCCcEEEEC
Confidence            4679999999999998888888898 78888888877654432 331111  23322    1 1222222 269999999


Q ss_pred             cCChHHHHHHHHHhcCC
Q 019414          234 TGNIDNMISAFECVHDG  250 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~  250 (341)
                      ++..........++.++
T Consensus        76 a~~~~~~~i~~a~l~~g   92 (450)
T 1ff9_A           76 IPYTFHATVIKSAIRQK   92 (450)
T ss_dssp             CC--CHHHHHHHHHHHT
T ss_pred             CccccchHHHHHHHhCC
Confidence            87532222334445553

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=94.60  E-value=0.07  Score=44.48  Aligned_cols=102  Identities=18%  Similarity=0.175  Sum_probs=64.0

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCC--ce--ecCCCCCChhHHHHHHHHhc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGV--TD--FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~--~~--vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ....++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++.-.  ..  ++..+..+  .. .. ....
T Consensus        67 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~--~~-~~-~~~~  141 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK--PE-EY-RALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC--GG-GG-TTTC
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCC--cc-hh-hccc
Confidence            334578999999999875 8888888888752 499999999976655543211  11  11111111  00 00 0112


Q ss_pred             CCccEEEeccCChH---H-HHHHHHHhcCCCcEEEEE
Q 019414          225 GGVDRSVECTGNID---N-MISAFECVHDGWGVAVLV  257 (341)
Q Consensus       225 ~~~d~vld~~g~~~---~-~~~~~~~l~~~~g~~v~~  257 (341)
                      +.+|+|+-....+.   . +..+.+.|+|+ |+++..
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  177 (227)
T 1g8a_A          142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence            36999985443321   3 78899999998 998887

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=94.60  E-value=0.074  Score=47.22  Aligned_cols=77  Identities=18%  Similarity=0.213  Sum_probs=47.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHH-cCCc-eecCCCCCChhHHHHHHHHhc-CCc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKK-FGVT-DFVNTSEHDRPIQEVIAEMTN-GGV  227 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~----~~~~-~g~~-~vv~~~~~~~~~~~~i~~~~~-~~~  227 (341)
                      .+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+    .+++ .+.. ..+..+-.+.   +.+.+... .++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDE---RALARIFDAHPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCH---HHHHHHHHHSCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCH---HHHHHHHhccCC
Confidence            3468999987 9999999999988999 8888887654422    1221 1221 1221111121   12233222 379


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+||++.+.
T Consensus        80 d~vih~A~~   88 (341)
T 3enk_A           80 TAAIHFAAL   88 (341)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECccc
Confidence            999998874

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=94.59  E-value=0.088  Score=46.83  Aligned_cols=135  Identities=16%  Similarity=0.113  Sum_probs=76.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|.|+|+|.+|...+..++.. +++.+.+.++++++.+ .++++|...++.  +    +.+.+.   ...+|+|+.|+..
T Consensus         7 rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~--~----~~~ll~---~~~~D~V~i~tp~   77 (329)
T 3evn_A            7 RYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYD--K----LEDMLA---DESIDVIYVATIN   77 (329)
T ss_dssp             EEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEES--C----HHHHHT---CTTCCEEEECSCG
T ss_pred             EEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccC--C----HHHHhc---CCCCCEEEECCCc
Confidence            689999999998776666554 5533445566766644 445566543321  1    332221   1369999999988


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          237 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       237 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      ....+.+..++..  |+-+++.-+-........   ...-.+++.+.-..  ..+....++.+.+++++|.+-
T Consensus        78 ~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  146 (329)
T 3evn_A           78 QDHYKVAKAALLA--GKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQ--KSVFIPMTQVIKKLLASGEIG  146 (329)
T ss_dssp             GGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEEC--SSCSSHHHHHHHHHHHTTTTC
T ss_pred             HHHHHHHHHHHHC--CCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEE--cccCCHHHHHHHHHHhCCCCC
Confidence            7788888888876  566777643221111110   01012344443222  222224578888999998763

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=94.58  E-value=0.16  Score=45.35  Aligned_cols=136  Identities=17%  Similarity=0.119  Sum_probs=80.2

Q ss_pred             CCEEEEECCC-HHHHHHHHHHHHc--CCCEEEEEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          157 GSSVAVFGLG-AVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~g-~~G~~a~~la~~~--g~~~vv~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .=+|.|+|+| .+|...+..++..  +++.+.++++++++.+. ++++|...++.  +    +.+.+.   ...+|+|+.
T Consensus        18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~--~----~~~ll~---~~~vD~V~i   88 (340)
T 1zh8_A           18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD--S----YEELLE---SGLVDAVDL   88 (340)
T ss_dssp             CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES--C----HHHHHH---SSCCSEEEE
T ss_pred             ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccC--C----HHHHhc---CCCCCEEEE
Confidence            3468899999 7898766666654  46344566677776654 56677644331  1    333322   236999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCC
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  305 (341)
                      |+......+.+..++..  |+-|++.-+-........   ...-.+++.+.-..  ..+....++.+.+++++|.+
T Consensus        89 ~tp~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~g~i  160 (340)
T 1zh8_A           89 TLPVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAE--NFRHVPAFWKAKELVESGAI  160 (340)
T ss_dssp             CCCGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEEC--GGGGCHHHHHHHHHHHTTTT
T ss_pred             eCCchHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe--cccCCHHHHHHHHHHhcCCC
Confidence            99877778888888886  677777633211111100   00012344443222  22223467888899998876

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=94.57  E-value=0.26  Score=46.55  Aligned_cols=81  Identities=20%  Similarity=0.292  Sum_probs=51.9

Q ss_pred             CCC--CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh-------hHHHHHHcCCcee---cCCCCCChhHHHHHHH
Q 019414          155 ERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-------RFEEAKKFGVTDF---VNTSEHDRPIQEVIAE  221 (341)
Q Consensus       155 ~~g--~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~-------~~~~~~~~g~~~v---v~~~~~~~~~~~~i~~  221 (341)
                      +++  .++||+|+ |++|...++.+...|+.+|+.+.++..       -.+.+++.|....   .|..+.+ .+.+.+.+
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~-~v~~~~~~  313 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADRE-ALAALLAE  313 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHHT
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHH
Confidence            455  89999986 999999888888889878888877632       1234555676432   2333321 23333333


Q ss_pred             Hhc-CCccEEEeccCC
Q 019414          222 MTN-GGVDRSVECTGN  236 (341)
Q Consensus       222 ~~~-~~~d~vld~~g~  236 (341)
                      ... +++|.+|++.|.
T Consensus       314 i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CCTTSCEEEEEECCCC
T ss_pred             HHHhCCCeEEEECCcc
Confidence            322 279999998874

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=94.57  E-value=0.059  Score=46.41  Aligned_cols=79  Identities=15%  Similarity=0.261  Sum_probs=49.6

Q ss_pred             CCCEEEEEC---CCHHHHHHHHHHHHcCCCEEEEEcCChhh-HHH-HHHcCCce---ecCCCCCCh--hHHHHHHHHhc-
Q 019414          156 RGSSVAVFG---LGAVGLAAAEGARIAGASRIIGVDRSSKR-FEE-AKKFGVTD---FVNTSEHDR--PIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G---~g~~G~~a~~la~~~g~~~vv~v~~~~~~-~~~-~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~-  224 (341)
                      .+.++||+|   +|++|.+.++.+...|+ +|+.+++++++ .+. .++++...   ..|..+.+.  .+.+.+.+..+ 
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            367899997   48999999998888999 88888888765 233 33444321   234433220  12223333332 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|++|++.|
T Consensus        85 ~~~iD~lv~nAg   96 (269)
T 2h7i_A           85 GNKLDGVVHSIG   96 (269)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCceEEEECCc
Confidence             16999999876

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=94.56  E-value=0.16  Score=48.29  Aligned_cols=82  Identities=15%  Similarity=0.169  Sum_probs=51.7

Q ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCCh-------------h----hHHHHHHcCCcee---cCCCCC
Q 019414          154 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSS-------------K----RFEEAKKFGVTDF---VNTSEH  211 (341)
Q Consensus       154 ~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~-------------~----~~~~~~~~g~~~v---v~~~~~  211 (341)
                      ++++.++||+|+ |++|...++.+...|+.+++.+ .++.             +    ..+.+++.|....   .|..+.
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            567889999986 9999998888878898667777 7762             1    1233455565432   233332


Q ss_pred             ChhHHHHHHHHhc-CCccEEEeccCC
Q 019414          212 DRPIQEVIAEMTN-GGVDRSVECTGN  236 (341)
Q Consensus       212 ~~~~~~~i~~~~~-~~~d~vld~~g~  236 (341)
                      + .+.+.+.+... +++|.||++.|.
T Consensus       328 ~-~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          328 E-AAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             H-HHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             H-HHHHHHHHHHhcCCCcEEEECCcC
Confidence            1 13333333322 379999999873

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.55  E-value=0.17  Score=43.91  Aligned_cols=74  Identities=14%  Similarity=0.197  Sum_probs=53.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|.|+|+ |.+|...+..+...|. .|++.++++++.+.+.+.|+..    .+..        +.. ...|+||.|+...
T Consensus        13 ~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~----~~~~--------~~~-~~aDvVi~av~~~   78 (286)
T 3c24_A           13 TVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGMGIPL----TDGD--------GWI-DEADVVVLALPDN   78 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHTTCCC----CCSS--------GGG-GTCSEEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhcCCCc----CCHH--------HHh-cCCCEEEEcCCch
Confidence            6999999 9999999998888898 8999999999888887777432    1111        001 2489999998653


Q ss_pred             HHHHHHHHHh
Q 019414          238 DNMISAFECV  247 (341)
Q Consensus       238 ~~~~~~~~~l  247 (341)
                       .+...++.+
T Consensus        79 -~~~~v~~~l   87 (286)
T 3c24_A           79 -IIEKVAEDI   87 (286)
T ss_dssp             -HHHHHHHHH
T ss_pred             -HHHHHHHHH
Confidence             345555444

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=94.55  E-value=0.07  Score=44.45  Aligned_cols=96  Identities=18%  Similarity=0.228  Sum_probs=63.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-----------eecCCCCCChhHHHHHHHH
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-----------DFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-----------~vv~~~~~~~~~~~~i~~~  222 (341)
                      ++++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++....           .++..+..+  +     ..
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~--~-----~~   97 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASS--L-----SF   97 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTS--C-----CS
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccc--c-----CC
Confidence            56889999998864 6677777776 77 999999999998888773221           111111111  0     01


Q ss_pred             hcCCccEEEeccC-----Ch----HHHHHHHHHhcCCCcEEEEEccC
Q 019414          223 TNGGVDRSVECTG-----NI----DNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       223 ~~~~~d~vld~~g-----~~----~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ..+.+|+|+-...     .+    ..++.+.+.|+|+ |++++....
T Consensus        98 ~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  143 (235)
T 3sm3_A           98 HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPG-AYLYLVEFG  143 (235)
T ss_dssp             CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEE-EEEEEEEEB
T ss_pred             CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCC-eEEEEEECC
Confidence            1247999884321     22    4788899999998 999887643

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=94.53  E-value=0.24  Score=42.06  Aligned_cols=88  Identities=14%  Similarity=0.149  Sum_probs=54.7

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|+|+|+ |.+|...++.+... +. .++++.......+.+...+++.++|+..++. ..+.+......+.++|+-++|-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~-elva~~d~~~dl~~~~~~~~DvvIDfT~p~a-~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDL-TLSAELDAGDPLSLLTDGNTEVVIDFTHPDV-VMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTC-EEEEEECTTCCTHHHHHTTCCEEEECSCTTT-HHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEccCCCHHHHhccCCcEEEEccChHH-HHHHHHHHHHcCCCEEEcCCCC
Confidence            5889997 99999999988765 77 5554433333333333346788888887652 3333433344488999988875


Q ss_pred             hHH-HHHHHHHhc
Q 019414          237 IDN-MISAFECVH  248 (341)
Q Consensus       237 ~~~-~~~~~~~l~  248 (341)
                      .+. .+++.+...
T Consensus        80 ~~e~~~~l~~aa~   92 (245)
T 1p9l_A           80 TAERFQQVESWLV   92 (245)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            333 333333333

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=94.53  E-value=0.18  Score=46.48  Aligned_cols=138  Identities=17%  Similarity=0.258  Sum_probs=81.8

Q ss_pred             CEEEEECCCH---HHHHHHHHHHHcC-CCEEE--EEcCChhhHH-HHHHcCCc--eecCCCCCChhHHHHHHHHh--cCC
Q 019414          158 SSVAVFGLGA---VGLAAAEGARIAG-ASRII--GVDRSSKRFE-EAKKFGVT--DFVNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       158 ~~vlI~G~g~---~G~~a~~la~~~g-~~~vv--~v~~~~~~~~-~~~~~g~~--~vv~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      =+|.|+|+|.   +|...+..++..+ + .++  ++++++++.+ .++++|+.  .++  .+    +.+.+....  +..
T Consensus        38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~-~lva~v~d~~~~~a~~~a~~~g~~~~~~~--~~----~~~ll~~~~~~~~~  110 (417)
T 3v5n_A           38 IRLGMVGGGSGAFIGAVHRIAARLDDHY-ELVAGALSSTPEKAEASGRELGLDPSRVY--SD----FKEMAIREAKLKNG  110 (417)
T ss_dssp             EEEEEESCC--CHHHHHHHHHHHHTSCE-EEEEEECCSSHHHHHHHHHHHTCCGGGBC--SC----HHHHHHHHHHCTTC
T ss_pred             ceEEEEcCCCchHHHHHHHHHHhhCCCc-EEEEEEeCCCHHHHHHHHHHcCCCccccc--CC----HHHHHhcccccCCC
Confidence            3689999987   8888777666665 5 555  3477777754 46678875  332  22    444443321  135


Q ss_pred             ccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccc---cceeeecceEEEeeecCCCCCCCHHHHHHHHHCC
Q 019414          227 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK  303 (341)
Q Consensus       227 ~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  303 (341)
                      +|+|+.|+......+.+..++..  |+-|++.-+-....-...   ...-.+++.+.-..  .++....++.+.+++++|
T Consensus       111 vD~V~I~tp~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~G  186 (417)
T 3v5n_A          111 IEAVAIVTPNHVHYAAAKEFLKR--GIHVICDKPLTSTLADAKKLKKAADESDALFVLTH--NYTGYPMVRQAREMIENG  186 (417)
T ss_dssp             CSEEEECSCTTSHHHHHHHHHTT--TCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEEC--GGGGSHHHHHHHHHHHTT
T ss_pred             CcEEEECCCcHHHHHHHHHHHhC--CCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEe--cccCCHHHHHHHHHHhcC
Confidence            99999999887788888888876  677888643221111110   01112344433222  222234688888999998


Q ss_pred             CCC
Q 019414          304 QLE  306 (341)
Q Consensus       304 ~i~  306 (341)
                      .|-
T Consensus       187 ~iG  189 (417)
T 3v5n_A          187 DIG  189 (417)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            773

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.53  E-value=0.084  Score=47.27  Aligned_cols=73  Identities=15%  Similarity=0.137  Sum_probs=46.9

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHc----CCce-ecCCCCCChhHHHHHHHHhcC-Ccc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKF----GVTD-FVNTSEHDRPIQEVIAEMTNG-GVD  228 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~----g~~~-vv~~~~~~~~~~~~i~~~~~~-~~d  228 (341)
                      +.+|||+|+ |.+|...++.+...|+ +|++++++.++... .+.+    ++.. ..|..+.     +.+.+...+ ++|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~~~~~~~~~~~d   82 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ-----NKLLESIREFQPE   82 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH-----HHHHHHHHHHCCS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccCH-----HHHHHHHHhcCCC
Confidence            468999987 9999999998888898 88888887654332 2222    2221 1233221     123333333 689


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      +||++.+
T Consensus        83 ~vih~A~   89 (357)
T 1rkx_A           83 IVFHMAA   89 (357)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999987

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=94.52  E-value=0.25  Score=46.01  Aligned_cols=40  Identities=30%  Similarity=0.479  Sum_probs=36.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  199 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~  199 (341)
                      +|.|+|.|.+|+..+..+...|. .|+++++++++.+.+++
T Consensus         4 kI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~~v~~l~~   43 (450)
T 3gg2_A            4 DIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRNKIEQLNS   43 (450)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHc
Confidence            68999999999999888888898 99999999999988877

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=94.51  E-value=0.15  Score=44.07  Aligned_cols=79  Identities=18%  Similarity=0.296  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHH-cCCcee--cCCCCCChhHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKK-FGVTDF--VNTSEHDRPIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~--~~~~~~~~-~g~~~v--v~~~~~~~~~~~~i~~~~~--~  225 (341)
                      .+.++||+|+ |  ++|.+.++.+...|+ +|+.++++.  ++.+.+.+ .+-...  .|..+.+ .+.+.+.+...  +
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQ-EIKDLFVELGKVWD  102 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHH-HHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHH-HHHHHHHHHHHHcC
Confidence            4678999984 4  499999988888999 888888877  44444433 332122  3433322 12222222211  3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|++|++.|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998873

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=94.51  E-value=0.11  Score=46.02  Aligned_cols=135  Identities=13%  Similarity=0.096  Sum_probs=78.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHH---HHH--hcCCccEEEe
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI---AEM--TNGGVDRSVE  232 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i---~~~--~~~~~d~vld  232 (341)
                      +|.|+|+ |.+|...+...+..+.+.+.++++++++....+.++...++.  +    +.+.+   .++  .+..+|+|+.
T Consensus         5 rvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~--~----~~~ll~~~~~l~~~~~~vD~V~I   78 (312)
T 3o9z_A            5 RFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFT--E----PEAFEAYLEDLRDRGEGVDYLSI   78 (312)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEES--C----HHHHHHHHHHHHHTTCCCSEEEE
T ss_pred             EEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeC--C----HHHHHHHhhhhcccCCCCcEEEE
Confidence            6899998 678988888888778855556666666643333333333321  1    32222   111  2348999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc---ceeeecceEEEeeecCCCCCCCHHHHHHHHHCC
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP---INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK  303 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  303 (341)
                      |+......+.+..++..  |+-|++.-+-....-....   ..-.+++.+.-..  ..+....++.+-+++++|
T Consensus        79 ~tP~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~--~~R~~p~~~~~k~~i~~g  148 (312)
T 3o9z_A           79 ASPNHLHYPQIRMALRL--GANALSEKPLVLWPEEIARLKELEARTGRRVYTVL--QLRVHPSLLALKERLGQE  148 (312)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEECC--GGGGCHHHHHHHHHHHTC
T ss_pred             CCCchhhHHHHHHHHHC--CCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEe--ehhcCHHHHHHHHHHHcC
Confidence            99887788888888887  6778886432211111100   0011234332222  222334677888888887

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=94.50  E-value=0.077  Score=47.83  Aligned_cols=74  Identities=15%  Similarity=0.191  Sum_probs=47.4

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHH-cCCcee-cCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~-~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      +.+|||+|+ |.+|...++.+... |+ +|++++++.++...+.+ .++..+ .|..+ +.+....+.+    ++|+||+
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~-d~~~~~~~~~----~~d~Vih   97 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITI-NKEWVEYHVK----KCDVILP   97 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTT-CHHHHHHHHH----HCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCC-CHHHHHHHhc----cCCEEEE
Confidence            457999986 99999998888777 88 89999888776544333 233322 23331 2112222211    5899999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.+.
T Consensus        98 ~A~~  101 (372)
T 3slg_A           98 LVAI  101 (372)
T ss_dssp             CBCC
T ss_pred             cCcc
Confidence            8763

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=94.49  E-value=0.17  Score=44.38  Aligned_cols=90  Identities=18%  Similarity=0.232  Sum_probs=57.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC-------CCCCChhHHHHHHHHhc--CCccE
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-------TSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~-------~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      +|.|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|......       ....+  .    .+...  ...|+
T Consensus         5 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~d~   77 (316)
T 2ew2_A            5 KIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFS--P----EEIDHQNEQVDL   77 (316)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEEC--G----GGCCTTSCCCSE
T ss_pred             eEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeec--c----hhhcccCCCCCE
Confidence            68999999999999888888898 8999999999888887766432110       00000  0    01111  15899


Q ss_pred             EEeccCChHHHHHHHHHh----cCCCcEEEEE
Q 019414          230 SVECTGNIDNMISAFECV----HDGWGVAVLV  257 (341)
Q Consensus       230 vld~~g~~~~~~~~~~~l----~~~~g~~v~~  257 (341)
                      ||-|+.. .....+++.+    .++ ..++.+
T Consensus        78 vi~~v~~-~~~~~v~~~l~~~l~~~-~~iv~~  107 (316)
T 2ew2_A           78 IIALTKA-QQLDAMFKAIQPMITEK-TYVLCL  107 (316)
T ss_dssp             EEECSCH-HHHHHHHHHHGGGCCTT-CEEEEC
T ss_pred             EEEEecc-ccHHHHHHHHHHhcCCC-CEEEEe
Confidence            9999875 3444444443    343 455554

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=94.49  E-value=0.2  Score=42.81  Aligned_cols=78  Identities=21%  Similarity=0.376  Sum_probs=47.9

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEcCChh---hHHHHHH-cCCcee--cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDF--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~---g~~G~~a~~la~~~g~~~vv~v~~~~~---~~~~~~~-~g~~~v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      .+.++||+|+   |++|.+.++.+...|+ +|+.++++++   ..+.+.+ .+....  .|..+.+ .+.+.+.+...  
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDE-ELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHH-HHHHHHHHHHHHc
Confidence            3578999985   6999999888888899 8888888875   2222322 332222  3433322 12222222211  


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++|++.|
T Consensus        85 g~iD~lv~~Ag   95 (261)
T 2wyu_A           85 GGLDYLVHAIA   95 (261)
T ss_dssp             SSEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999887

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=94.48  E-value=0.14  Score=44.73  Aligned_cols=68  Identities=21%  Similarity=0.157  Sum_probs=49.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-------CCceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-------GVTDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-------g~~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      ..+|.|+|+|.+|...++.+. .|+ .|++.++++++.+.+.+.       ++...-+..+        +     ...|+
T Consensus        12 ~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~--------~-----~~aDl   76 (293)
T 1zej_A           12 HMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK--------V-----KDCDI   76 (293)
T ss_dssp             CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT--------G-----GGCSE
T ss_pred             CCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH--------H-----cCCCE
Confidence            468999999999998887777 899 999999999998887765       2321111110        1     24899


Q ss_pred             EEeccCChHH
Q 019414          230 SVECTGNIDN  239 (341)
Q Consensus       230 vld~~g~~~~  239 (341)
                      ||+|+.....
T Consensus        77 Vieavpe~~~   86 (293)
T 1zej_A           77 VMEAVFEDLN   86 (293)
T ss_dssp             EEECCCSCHH
T ss_pred             EEEcCcCCHH
Confidence            9999986543

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=94.47  E-value=0.028  Score=47.38  Aligned_cols=102  Identities=11%  Similarity=0.112  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-eecCCCCCChhHHHHHHHHhcCC
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      ....++.+||=+|+|. |..++.+++.....+|++++.+++..+.+++    .+.. .+ .....+  ..+.+.....+.
T Consensus        67 ~~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v-~~~~~d--~~~~~~~~~~~~  142 (232)
T 3ntv_A           67 IRMNNVKNILEIGTAI-GYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQV-RIIEGN--ALEQFENVNDKV  142 (232)
T ss_dssp             HHHHTCCEEEEECCSS-SHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTE-EEEESC--GGGCHHHHTTSC
T ss_pred             HhhcCCCEEEEEeCch-hHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcE-EEEECC--HHHHHHhhccCC
Confidence            3445788999998753 6667777775433499999999988777665    4432 11 111111  111122011357


Q ss_pred             ccEEEeccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          227 VDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       227 ~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ||+||-....   ...++.+.+.|+|+ |.++.-+
T Consensus       143 fD~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~d~  176 (232)
T 3ntv_A          143 YDMIFIDAAKAQSKKFFEIYTPLLKHQ-GLVITDN  176 (232)
T ss_dssp             EEEEEEETTSSSHHHHHHHHGGGEEEE-EEEEEEC
T ss_pred             ccEEEEcCcHHHHHHHHHHHHHhcCCC-eEEEEee
Confidence            9999743222   34567888999997 9987744

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=94.47  E-value=0.1  Score=46.87  Aligned_cols=134  Identities=16%  Similarity=0.072  Sum_probs=75.4

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          158 SSVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       158 ~~vlI~G~g~~G~~-a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      =+|.|+|.|.+|.. .+..++.. +++.+.++++++++.+  ++++...++  .+    +.+.+.   ...+|+|+.|+.
T Consensus         8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~~--~~----~~~ll~---~~~vD~V~i~tp   76 (352)
T 3kux_A            8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH--ADWPAIPVV--SD----PQMLFN---DPSIDLIVIPTP   76 (352)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH--TTCSSCCEE--SC----HHHHHH---CSSCCEEEECSC
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH--hhCCCCceE--CC----HHHHhc---CCCCCEEEEeCC
Confidence            36899999999985 66666554 6633445566666554  233222222  11    333221   237999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc---ceeeecceEEEeeecCCCCCCCHHHHHHHHHCCCCC
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP---INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~  306 (341)
                      .....+.+..++..  |+-|++.-+-.........   ..-.+++.+.-..  ..+....++.+.+++++|.+-
T Consensus        77 ~~~H~~~~~~al~a--GkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~~~~i~~g~iG  146 (352)
T 3kux_A           77 NDTHFPLAQSALAA--GKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFH--NRRWDSDFLTLKTLLAEGSLG  146 (352)
T ss_dssp             TTTHHHHHHHHHHT--TCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECC--GGGGCHHHHHHHHHHHHTTTC
T ss_pred             hHHHHHHHHHHHHC--CCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEe--ecccCHHHHHHHHHHhcCCCC
Confidence            87788888888887  6777776432111111100   0011234333222  222224577888888888763

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=94.47  E-value=0.022  Score=49.18  Aligned_cols=75  Identities=25%  Similarity=0.300  Sum_probs=46.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC--hhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD--RPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~--~~~~~~i~~~~~~~~d~vld  232 (341)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+....+    ..|..+.+  ..+.+.+.+.. +++|++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~~~~~~~~~~~~~~~~-g~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLREAAYADGLPGAVAAGL-GRLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTSHHHHHHHHHHHHHHH-SCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCCHHHHHHHHHHHHHhc-CCCCEEEE
Confidence            4678999987 9999999998888999 899998876543221111    12222211  01222222222 37999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8873

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=94.46  E-value=0.095  Score=44.41  Aligned_cols=106  Identities=17%  Similarity=0.216  Sum_probs=66.9

Q ss_pred             hhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhc
Q 019414          145 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       145 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      +..+.......++.+||-+|+|. |..+..+++. |...|++++.+++..+.+++.....-+.....+  +.+ + ...+
T Consensus        33 ~~~l~~~~~~~~~~~vLD~GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d--~~~-~-~~~~  106 (253)
T 3g5l_A           33 WHELKKMLPDFNQKTVLDLGCGF-GWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKA--IED-I-AIEP  106 (253)
T ss_dssp             HHHHHTTCCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEECC--GGG-C-CCCT
T ss_pred             HHHHHHhhhccCCCEEEEECCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEcc--hhh-C-CCCC
Confidence            33344555566889999998764 6667777766 545999999999999888875321100111111  100 0 0112


Q ss_pred             CCccEEEeccC------ChHHHHHHHHHhcCCCcEEEEE
Q 019414          225 GGVDRSVECTG------NIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       225 ~~~d~vld~~g------~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      +.||+|+-...      -...++.+.+.|+|+ |++++.
T Consensus       107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~  144 (253)
T 3g5l_A          107 DAYNVVLSSLALHYIASFDDICKKVYINLKSS-GSFIFS  144 (253)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCC-cEEEEE
Confidence            47999985432      134678899999998 998876

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=94.45  E-value=0.05  Score=46.99  Aligned_cols=95  Identities=13%  Similarity=0.212  Sum_probs=57.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          159 SVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~--g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      +|||+|+ |.+|...++.+...  |+ +|+++++++++.+.+...++..+ .|..+.     +.+.+... ++|+||++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~-----~~~~~~~~-~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYGDE-----AALTSALQ-GVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTTCH-----HHHHHHTT-TCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCCCH-----HHHHHHHh-CCCEEEEeC
Confidence            4899987 99999998888777  87 78888888777655555555432 233321     23333332 589999988


Q ss_pred             CCh-----HHHHHHHHHhcC-CCcEEEEEccC
Q 019414          235 GNI-----DNMISAFECVHD-GWGVAVLVGVP  260 (341)
Q Consensus       235 g~~-----~~~~~~~~~l~~-~~g~~v~~g~~  260 (341)
                      +..     .....+++.+.. +.++++.++..
T Consensus        74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence            642     122333343332 22578877653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	341
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-50
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	2e-45
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	3e-44
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-42
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-41
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	5e-35
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	6e-35
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	7e-22
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	2e-20
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-20
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	7e-19
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-18
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	2e-18
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	8e-15
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	5e-13
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-12
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	2e-12
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	4e-11
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	2e-10
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	6e-07
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-06
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	2e-05
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	2e-05
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	4e-05
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	5e-05

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  164 bits (416), Expect = 1e-50
 Identities = 71/175 (40%), Positives = 104/175 (59%)

Query: 129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 188
           AP +KVC++ CG STG GA +   K + GS+  VFGLG VGL+   G + AGASRIIG+D
Sbjct: 2   APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
            +  +FE+A   G T+ ++  +  +PI EV++EMT   V  + E  G+++ MI A    H
Sbjct: 62  LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121

Query: 249 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 303
             +G +V+VGVP    +    P+ +   RT KG  FG  K R D+P +V  ++ K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  150 bits (380), Expect = 2e-45
 Identities = 79/175 (45%), Positives = 113/175 (64%), Gaps = 2/175 (1%)

Query: 129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 188
           APL+  C++ CG +TG GA +N AK   GS+ AVFGLG VG +A  G + AGASRIIGV 
Sbjct: 1   APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
               +F +A + G T+ +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  +
Sbjct: 60  THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119

Query: 249 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 303
            G GV V++G+ S +      P+ +L  R+LKG+ FG +K   ++  +VD YM K
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 173

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  147 bits (372), Expect = 3e-44
 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 2/175 (1%)

Query: 129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 188
           A L++VC++ CG S+G GA +N AK   GS+ AVFGLG VGL+A  G +IAGASRII +D
Sbjct: 1   ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
            + ++F +AK  G TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C  
Sbjct: 61  INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 249 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 303
            GWG   +VG    +       ++V+  R++ GTFFG +K    +P++V  Y NK
Sbjct: 121 LGWGSCTVVGAKVDEMTIP--TVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 173

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  143 bits (360), Expect = 2e-42
 Identities = 81/175 (46%), Positives = 117/175 (66%)

Query: 129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 188
           +PL+KVC++ CG STG G+ + VAK  +GS+ AVFGLG VGL+   G + AGA+RIIGVD
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
            +  +F +AK+ G T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 249 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 303
           + +GV+V+VGVP         P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 175

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  141 bits (355), Expect = 1e-41
 Identities = 93/175 (53%), Positives = 119/175 (68%)

Query: 129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 188
           APLDKVC+L CG+STG GA +N AK E GS  AVFGLG VGLA   G ++AGASRIIGVD
Sbjct: 1   APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
            +  +F  AK+FG T+ +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H
Sbjct: 61  INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 249 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 303
            GWGV+V+VGV +      T+P  ++  RT KGT FG +K    +P +V  YM+K
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 175

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  123 bits (310), Expect = 5e-35
 Identities = 95/175 (54%), Positives = 121/175 (69%), Gaps = 1/175 (0%)

Query: 129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 188
           APLD VC+L CGVSTG GA +N AK E GS+ AVFGLGAVGLAA  G   AGA RII VD
Sbjct: 1   APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60

Query: 189 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
            +  +FE+AK FG TDFVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E   
Sbjct: 61  LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 249 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 303
            GWGV+VLVG      V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K
Sbjct: 121 KGWGVSVLVGWTDLHDVA-TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 174

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  123 bits (310), Expect = 6e-35
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 189
           P++ +  L CG+ TG GA +N  K    SS   +G GAVGL+A   A++ GAS II VD 
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 190 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 249
              R E AK+ G T  +N+   D      I E+T+GGV+ ++E TG+ + +    +    
Sbjct: 62  VESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDA-LG 118

Query: 250 GWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKQ 304
             G   +VG P           ++L   +T+ G   G+  P+  +P +V +Y   +
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 89.5 bits (221), Expect = 7e-22
 Identities = 53/133 (39%), Positives = 81/133 (60%), Gaps = 1/133 (0%)

Query: 30  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 89
           GH  AG+VESVGEGV+ L+ GD V+P++  +CG+C+ C +  +N+C  +R+   +G+M  
Sbjct: 65  GHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-P 123

Query: 90  DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 149
           DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PL  +D+    +        A  
Sbjct: 124 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFE 183

Query: 150 NVAKPERGSSVAV 162
            +   +   +V  
Sbjct: 184 LMHSGKSIRTVVK 196

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 85.7 bits (211), Expect = 2e-20
 Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 1/133 (0%)

Query: 31  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 90
           HE AG+VESVG GV++ + G+ V+P+F  +CG+CR C+S  +N C     N    VM + 
Sbjct: 68  HEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SP 126

Query: 91  GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 150
            ++RF+  G  V  FLGTSTFS+YTVV+   VAKI+P   LD+       + +   A   
Sbjct: 127 KETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDL 186

Query: 151 VAKPERGSSVAVF 163
           +   +   +V   
Sbjct: 187 MKHGKCIRTVLSL 199

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 85.7 bits (211), Expect = 2e-20
 Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 6/161 (3%)

Query: 5   KHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDC 64
                 P +       +  LFP + GHE AG+VESVG GV++ + GD V+P F  +C  C
Sbjct: 41  IATCVCPTDINATDPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRC 100

Query: 65  RHCRSDVSNMCDLLRI---NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC 121
           + C S ++N+C  LR      +   ++ D  SRF+  G  + HF+G S+FS+YTVV    
Sbjct: 101 KLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN 160

Query: 122 VAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV 162
           +A+++    LD +   +    + +   +++ K   G S+  
Sbjct: 161 LARVDDEFDLDLLVTHALPFES-INDAIDLMKE--GKSIRT 198

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 81.5 bits (200), Expect = 7e-19
 Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 11/163 (6%)

Query: 8   SFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHC 67
                +     +     FP I GHEA GVVES+G GV+ ++ GD V+P+F  +CG CR C
Sbjct: 44  GICGSDSSVLKEIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRAC 103

Query: 68  RSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 127
           +S  SN C+   +   +  ++AD  SRF+  G+P+ + +GTSTF+EYTVV    VAKI+P
Sbjct: 104 KSSNSNFCEKNDMGA-KTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP 162

Query: 128 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGL 170
              ++ +                + +  +   +   G G   +
Sbjct: 163 KINVNFLVSTKLT----------LDQINKAFELLSSGQGVRSI 195

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 79.6 bits (195), Expect = 2e-18
 Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 6/166 (3%)

Query: 130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 189
           PL+   +++  ++TG      +A  E GSSV V G+GAVGL    GA++ GA RIIGV  
Sbjct: 2   PLENAVMITDMMTTGFHG-AELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 190 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 249
                E AK +G TD +N  ++     +V+      GVDR +   G  + +  A + V  
Sbjct: 61  RPICVEAAKFYGATDILNY-KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 250 GWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFFGNYKPRTD 292
           G G+   +         +   +     +  +T+KG      + R +
Sbjct: 120 G-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 79.9 bits (196), Expect = 2e-18
 Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 8/142 (5%)

Query: 25  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 84
            P I GHEAAG+VES+GEGV+ +  GD V+P+FT +CG CR C+    N C    ++  R
Sbjct: 61  LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPR 120

Query: 85  GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGVS 142
           G M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+    LD     +L     
Sbjct: 121 GTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFE-- 177

Query: 143 TGLGATLNVAKPERGSSVAVFG 164
             +    ++ +   G S+    
Sbjct: 178 -KINEGFDLLRS--GESIRTIL 196

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 69.6 bits (169), Expect = 8e-15
 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 8/173 (4%)

Query: 131 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190
           LD + +  C  +T   A     +   G +V + G G +GL     AR  GA  +I +  S
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 191 SKRFEEAKKFGVTDFVNTSEH--DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 248
             R + A++ G    +N  E   +   + ++      G D  +E TG+   ++   E + 
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 249 DGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDM 299
            G G   + GV         K     VL   T KG +  +    +     V +
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD---TSHFVKTVSI 171

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 64.2 bits (155), Expect = 5e-13
 Identities = 32/166 (19%), Positives = 73/166 (43%), Gaps = 9/166 (5%)

Query: 137 LSCGVSTGLGATLNVAKPER-GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 195
           L+    T   A    A+    G+ VA+ G+G +G  A +  ++   + +I +D   ++ +
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 196 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV 255
            A++ G    V+      P+++V+      GV+ +++  G+   +      +    G  +
Sbjct: 72  LAERLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLI 128

Query: 256 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM 301
           +VG   +      + I   +E + +G+  GNY    +L  +V + +
Sbjct: 129 IVGYGGELRFPTIRVI--SSEVSFEGSLVGNYV---ELHELVTLAL 169

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 63.4 bits (153), Expect = 1e-12
 Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 29/185 (15%)

Query: 5   KHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDC 64
                   + +   Q      P + GHE +G++E++G  V++L+VGDHV+ +  G CG C
Sbjct: 36  VATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKC 94

Query: 65  RHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGE--PVNHFLGTSTFSEYTVVHSGCV 122
             C +     C         G   ++G      + +    +HF   S+F+ Y +      
Sbjct: 95  TQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNT 153

Query: 123 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS 182
            K+    P D++                                 +  AA +  +     
Sbjct: 154 VKVTKDFPFDQLVKFYAF-------------------------DEINQAAIDSRKGITLK 188

Query: 183 RIIGV 187
            II +
Sbjct: 189 PIIKI 193

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 2e-12
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 12/170 (7%)

Query: 137 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 196
           LS G+               G  V V G G +G+     A+  GA++++  D S+ R  +
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 197 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAV 255
           AK+ G    +  S+          E   G   + ++ECTG   ++ +       G G  V
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLV 125

Query: 256 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 305
           LVG+ S+           + E  +KG F    +     P  + M  +K +
Sbjct: 126 LVGLGSEMTTVPLLHA-AIREVDIKGVF----RYCNTWPVAISMLASKSV 170

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 58.8 bits (141), Expect = 4e-11
 Identities = 35/173 (20%), Positives = 53/173 (30%), Gaps = 12/173 (6%)

Query: 127 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIG 186
           P   L  V  L C   T     L   +   G  V V G+G +G    + A   GA  +  
Sbjct: 2   PQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF 60

Query: 187 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFEC 246
               +KR E AK  G  + VN                    D  +       N+      
Sbjct: 61  TTSEAKR-EAAKALGADEVVN------SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 247 VHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 299
           +    G   LVG P+           ++  R + G+  G      +   ++D 
Sbjct: 114 LKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG---IPETQEMLDF 162

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 57.2 bits (137), Expect = 2e-10
 Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 131 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 190
           +  +  LS  + TG       A    GS+V V G G VGLAAA  AR+ GA+ +I  D +
Sbjct: 1   IRDLTCLSDILPTGYHG-AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59

Query: 191 SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG-------------- 235
             R   AK  G      + +    + E IA +     VD +V+  G              
Sbjct: 60  PARLAHAKAQGFEIADLSLDTP--LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHE 117

Query: 236 -NIDNMISAFECVHDGWGVAVLVGVPSKDA 264
                + S  +      G   + G+   + 
Sbjct: 118 APATVLNSLMQVTRVA-GKIGIPGLYVTED 146

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.8 bits (110), Expect = 6e-07
 Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 18/145 (12%)

Query: 22  TPLFPRIFGHEAAGVVESVGEGVS-DLEVGDH-VLPVFTGECGDCRHCRSDVSNMCDLLR 79
               P + GHE  G V  +G   +  L+VG    +      C +C  C++D    C    
Sbjct: 59  NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT--- 115

Query: 80  INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC 139
                       +   + +    + ++    ++ Y  VH   V  I     ++ + +   
Sbjct: 116 ------------KFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEA 163

Query: 140 GVSTGLGATLNVAKPERGSSVAVFG 164
           GV       +         ++  + 
Sbjct: 164 GVHEAFER-MEKGDVRYRFTLVGYD 187

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 45.3 bits (106), Expect = 2e-06
 Identities = 18/109 (16%), Positives = 30/109 (27%), Gaps = 16/109 (14%)

Query: 44  VSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPV 102
           V     GD V +      C  C  C   + N CD                +    +  P 
Sbjct: 73  VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCD--------------HMTGTYNSPTPD 118

Query: 103 NHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLN 150
                   +S+  VVH   V +I      + +   ++      L   + 
Sbjct: 119 EPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVK 167

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 42.7 bits (99), Expect = 2e-05
 Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 22/147 (14%)

Query: 18  FQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 77
                   P + GHEA+G V  VG+ V  L+ GD V       C  C+ C+    N+C  
Sbjct: 50  IADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCP- 108

Query: 78  LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 137
                               +             + Y V  +    K+     + ++   
Sbjct: 109 --------------------DLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTH 148

Query: 138 SCGVSTGLGATLNVAKPERGSSVAVFG 164
           S  +   + A    A+ +  +++ V  
Sbjct: 149 SFKLEQTVDA-FEAARKKADNTIKVMI 174

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 42.6 bits (99), Expect = 2e-05
 Identities = 11/74 (14%), Positives = 23/74 (31%), Gaps = 7/74 (9%)

Query: 110 TFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGA 167
             +EY +V      + K+       +   ++  V   + + L+ A    G     F  G 
Sbjct: 133 GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVIS-LDDAPRGYG----EFDAGV 187

Query: 168 VGLAAAEGARIAGA 181
                 +  +   A
Sbjct: 188 PKKFVIDPHKTFSA 201

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 41.5 bits (96), Expect = 4e-05
 Identities = 31/163 (19%), Positives = 51/163 (31%), Gaps = 25/163 (15%)

Query: 1   MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE 60
             S  H        +   +      P   GHE AG +E VG+ V     GD V       
Sbjct: 38  CHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQG 97

Query: 61  CGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV-HS 119
            G+C +CR    ++CD  R   +                           ++EY +V H 
Sbjct: 98  EGNCYYCRIGEEHLCDSPRWLGINFDG----------------------AYAEYVIVPHY 135

Query: 120 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV 162
             + K+  + P+    +     +  +    N      G  V +
Sbjct: 136 KYMYKLRRVKPMITKTMKLEEANEAIDNLENFKA--IGRQVLI 176

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.0 bits (95), Expect = 5e-05
 Identities = 31/149 (20%), Positives = 50/149 (33%), Gaps = 29/149 (19%)

Query: 17  GFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMC 75
           G     P  P I GHE  G V +VG GV+ ++ GD V +P     CG C HC +    +C
Sbjct: 52  GDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLC 111

Query: 76  DLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC 135
           +                       +    +     ++EY +     V  +    P +   
Sbjct: 112 E----------------------SQQNTGYSVNGGYAEYVLADPNYVGIL----PKNVKA 145

Query: 136 ILSCGVSTGLGATLNVAK--PERGSSVAV 162
            +  G    +   L+  +     G  V  
Sbjct: 146 TIHPGKLDDINQILDQMRAGQIEGRIVLE 174

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	341
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.96
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.95
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.95
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.95
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.94
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.94
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.94
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.94
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.93
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.93
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.93
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.93
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.92
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.92
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.92
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.92
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.91
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.91
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.9
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.9
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.89
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.89
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.88
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.84
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.84
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.8
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.78
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.75
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.7
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.69
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.67
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.53
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.12
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.0
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.9
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.88
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.59
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.54
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.53
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.53
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.52
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.39
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.31
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.25
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.17
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.11
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.01
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.99
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.99
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.98
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.97
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.97
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.96
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.95
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.95
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.91
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.88
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.86
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.84
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.84
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.82
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.8
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.77
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.76
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.71
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.71
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.67
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.66
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.65
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.65
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.65
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.62
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.58
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.57
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.57
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.55
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.54
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.52
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.52
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.47
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.47
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.46
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.46
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.4
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.38
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.38
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.37
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	96.36
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.34
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.34
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.33
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.33
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.32
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.32
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.31
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.3
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.29
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.26
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.26
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.26
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.22
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.22
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.19
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.19
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.17
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.17
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.15
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.13
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.12
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.08
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.05
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.04
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.04
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.01
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	95.98
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.96
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.95
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.92
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.83
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	95.78
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	95.68
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.66
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	95.66
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	95.66
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.64
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	95.63
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.62
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	95.59
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	95.55
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.51
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.5
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.49
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.44
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.41
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	95.36
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.23
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.22
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.18
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	95.16
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.1
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.08
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	95.05
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	94.99
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	94.97
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.96
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.92
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.77
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.72
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.65
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	94.61
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.6
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.59
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.53
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.48
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.45
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	94.38
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.36
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.31
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.18
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.17
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.15
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.13
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.1
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.1
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	94.1
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.07
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.07
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.06
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	93.99
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.96
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.93
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.9
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	93.78
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.75
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.7
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.65
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.65
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	93.64
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.59
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.59
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	93.59
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.58
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	93.52
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	93.47
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.33
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	93.3
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.25
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.24
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.21
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	92.96
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.96
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.94
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	92.78
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.78
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.71
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.67
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	92.65
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.64
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	92.58
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.56
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.52
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.49
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.34
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.19
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	92.17
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.15
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	92.11
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	91.95
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.91
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.89
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.89
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.86
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.84
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	91.74
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	91.6
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	91.42
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	91.4
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.3
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.28
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	91.2
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	91.1
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.1
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.06
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	90.99
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	90.95
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	90.88
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.87
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.66
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	90.64
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	90.57
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	90.56
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	90.54
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.47
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	90.39
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.33
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	90.3
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	90.29
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	90.26
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	90.14
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.13
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	90.07
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	90.05
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.0
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.97
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.94
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.91
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	89.83
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	89.81
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	89.81
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	89.69
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	89.64
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	89.57
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	89.49
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.45
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.33
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.32
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.32
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	89.32
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	89.26
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	89.26
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.25
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	89.21
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.2
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	89.18
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.17
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	88.84
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.83
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	88.78
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	88.75
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	88.66
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	88.65
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.59
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	88.58
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	88.51
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.47
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	88.41
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.26
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	88.0
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	87.94
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	87.93
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	87.88
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	87.8
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	87.77
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.68
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	87.66
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	87.57
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	87.52
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	87.45
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	87.37
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	87.35
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.3
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	87.06
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	87.04
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	86.97
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	86.86
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	86.81
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	86.7
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	86.7
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	86.6
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	86.5
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	86.44
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.37
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	86.22
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	86.2
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	86.05
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.9
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	85.8
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	85.62
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	85.61
d1o58a_	293	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.6
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.55
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	85.22
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	85.2
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	85.17
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	85.15
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	85.13
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.05
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	84.91
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	84.84
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	84.73
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	84.71
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	84.71
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	84.54
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	84.25
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.21
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	84.12
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	83.41
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	83.4
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	83.39
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	83.09
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	82.83
d1aono_	97	Chaperonin-10 (GroES) {Escherichia coli [TaxId: 56	82.81
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	82.72
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	82.59
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	82.29
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.22
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.2
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	81.96
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	81.86
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	81.73
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	81.65
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	81.65
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	81.63
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	81.51
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	81.26
d1p5ja_	319	L-serine dehydratase {Human (Homo sapiens) [TaxId:	80.96
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	80.74
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	80.56
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.43
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	80.24
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	80.11

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=2e-30  Score=216.78  Aligned_cols=162  Identities=33%  Similarity=0.540  Sum_probs=141.8

Q ss_pred             CccccccCCcCcceeeecc-CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||+.++|+|++|+..... .....+|.++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++++|.+..
T Consensus        37 lIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~  116 (199)
T d1cdoa1          37 RIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGW  116 (199)
T ss_dssp             EEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSG
T ss_pred             EEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccc
Confidence            6899999999999554433 334468999999999999999999999999999999999999999999999999999987


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      .+...+. ...+.+.+..+|...++..++|+||||+++++++++++|++++++++|++.+++.|+++++....+.+.|++
T Consensus       117 ~~~~~~~-~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~t  195 (199)
T d1cdoa1         117 ANESPDV-MSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRT  195 (199)
T ss_dssp             GGTCTTT-TSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEE
T ss_pred             ccccccc-ccCcccceeeccceeecccccCCceEEEEEchHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCE
Confidence            7654444 334455667777777777788999999999999999999999999999999999999999988889999999


Q ss_pred             EEEE
Q 019414          160 VAVF  163 (341)
Q Consensus       160 vlI~  163 (341)
                      |||+
T Consensus       196 Vlv~  199 (199)
T d1cdoa1         196 VLSL  199 (199)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            9984

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=5.1e-29  Score=204.07  Aligned_cols=173  Identities=32%  Similarity=0.503  Sum_probs=152.4

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  208 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~  208 (341)
                      ++++.||+++|++.|||+++.+.++++||++|+|+|+|++|++++|+||.+|+++|++++++++|+++++++|+++++|+
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35678999999999999999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             CCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc-ceeeecceEEEeeecCC
Q 019414          209 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNY  287 (341)
Q Consensus       209 ~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~  287 (341)
                      ++.+  +.+++++++++++|++|||+|+++.+++++++++++ |+++++|........+++. ..+.+++++.|+..+++
T Consensus        81 ~~~~--~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          81 KTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             TTSC--HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             CCcC--HHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCC
Confidence            8776  999999999999999999999989999999999998 9999999754433333332 23568999999987776


Q ss_pred             CCCCCHHHHHHHHHCCC
Q 019414          288 KPRTDLPSVVDMYMNKQ  304 (341)
Q Consensus       288 ~~~~~~~~~~~~~~~~~  304 (341)
                      .++++++++++++++|+
T Consensus       158 ~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 SPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHcCC
Confidence            65567899999999885

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.96  E-value=2.5e-28  Score=199.58  Aligned_cols=173  Identities=44%  Similarity=0.775  Sum_probs=149.4

Q ss_pred             chhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC
Q 019414          131 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  210 (341)
Q Consensus       131 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~  210 (341)
                      +.+||.+.|++.|+|+++.+.++++|||+|+|+|+|++|++++|+||.+|+++|++++++++|+++++++|++.++|+++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            45789999999999999989999999999999999999999999999999989999999999999999999999999877


Q ss_pred             CChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCCC
Q 019414          211 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  290 (341)
Q Consensus       211 ~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  290 (341)
                      .+....+..+..+++++|++||++|++..+++++..+.+++|+++.+|.......+++.+..+.+++++.|+.++++.+ 
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~-  160 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKG-  160 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCCG-
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCCH-
Confidence            6544565666666669999999999999999999988774489999998776666666555566788999998776543 


Q ss_pred             CCHHHHHHHHHCCC
Q 019414          291 TDLPSVVDMYMNKQ  304 (341)
Q Consensus       291 ~~~~~~~~~~~~~~  304 (341)
                      ++++++++++++||
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            48999999999885

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.95  E-value=4.6e-30  Score=211.04  Aligned_cols=143  Identities=20%  Similarity=0.275  Sum_probs=124.6

Q ss_pred             CccccccCCcCcceeeecc----CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ----GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~----~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|++|+.....    ....++|+++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++.+++|.
T Consensus        29 lVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~  108 (178)
T d1e3ja1          29 LLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCP  108 (178)
T ss_dssp             EEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCT
T ss_pred             EEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCCCCEEEECcccccCCccccccCCccccc
Confidence            6899999999999654322    223357899999999999999999999999999999999999999999999999998


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      +..+...                     ...+|+|+||+++|+++++++|+++++++||.+++++.|||+++ +.+++++
T Consensus       109 ~~~~~~~---------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~-~~~~~~~  166 (178)
T d1e3ja1         109 DLTFCAT---------------------PPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF-EAARKKA  166 (178)
T ss_dssp             TCEETTB---------------------TTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHH-HHHHHCC
T ss_pred             cccceec---------------------cccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHH-HHhCCCC
Confidence            8766321                     11247999999999999999999999999999999999999995 6789999


Q ss_pred             CCEEEEECC
Q 019414          157 GSSVAVFGL  165 (341)
Q Consensus       157 g~~vlI~G~  165 (341)
                      |++|+|+|+
T Consensus       167 g~~VlVig~  175 (178)
T d1e3ja1         167 DNTIKVMIS  175 (178)
T ss_dssp             TTCSEEEEE
T ss_pred             CCEEEEEcc
Confidence            999999964

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.95  E-value=3.5e-29  Score=207.80  Aligned_cols=160  Identities=23%  Similarity=0.479  Sum_probs=125.2

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|++|+.........++|+|||||++|+|+++|+++++|++||||+.. ..+|+.|++|+++++|+|++...
T Consensus        32 lVkv~a~gic~sD~~~~~G~~~~~~P~i~GHE~~G~V~~vG~~v~~~~vGDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~  110 (194)
T d1f8fa1          32 LVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLS-YGYCGKCTQCNTGNPAYCSEFFG  110 (194)
T ss_dssp             EEEEEEEECCHHHHHHHTTSSCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEEC-CCCCSSSHHHHTTCGGGCTTHHH
T ss_pred             EEEEEEEEecCchHhhhhhcccccCCcccccceEEEeeecCccceeEccCceeeee-cccccCChhhhCCCccccccccc
Confidence            68999999999996655444455789999999999999999999999999999655 45899999999999999998655


Q ss_pred             cCcccccccCCCcccc--cCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           81 NPVRGVMLADGQSRFS--INGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~--~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      ....|... ++...+.  -.+....+..+.|+|+||+.++...++++|++++++++                        
T Consensus       111 ~~~~g~~~-dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~i~~~~~------------------------  165 (194)
T d1f8fa1         111 RNFSGADS-EGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQL------------------------  165 (194)
T ss_dssp             HSSSSSCS-SSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTCCGGGG------------------------
T ss_pred             ceeccccc-cceeeeecCCceeeccccccccccceeEEEehHHEEECCCCCCcccE------------------------
Confidence            44444322 2222221  22334445566799999999999999999999887653                        


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEE
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGV  187 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v  187 (341)
                       +++.|+|++|++++|+|+.+|+.+|+++
T Consensus       166 -~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         166 -VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             -EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             -EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence             3456779999999999999999777775

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=4.7e-28  Score=197.70  Aligned_cols=173  Identities=45%  Similarity=0.837  Sum_probs=146.6

Q ss_pred             CchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       130 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      +++.||.++|++.|+|+++.+.+++++||+|+|+|+|++|++++|+||.+|+++|++++.+++|+++++++|++.++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            46889999999999999998999999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCC
Q 019414          210 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  289 (341)
Q Consensus       210 ~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  289 (341)
                      ..+.......+...++++|++|||+|+++.+++++++++++.|+++.+|.......++..  .+..+.++.|+..+++.+
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~--~~~~~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTV--DVILGRSINGTFFGGWKS  159 (174)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHH--HHHTTCEEEECSGGGCCH
T ss_pred             cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchH--HHhccCEEEEEEeeCCCh
Confidence            554335555555555699999999999999999999999843899999987655444432  233467888988877766


Q ss_pred             CCCHHHHHHHHHCCC
Q 019414          290 RTDLPSVVDMYMNKQ  304 (341)
Q Consensus       290 ~~~~~~~~~~~~~~~  304 (341)
                      .++++++++++++||
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            678888999998875

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=1.2e-28  Score=206.61  Aligned_cols=161  Identities=31%  Similarity=0.536  Sum_probs=136.3

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|++|+..........+|+++|||++|+|+++|++|+++++||||++.+..+|+.|++|+.+++++|.+...
T Consensus        37 lVkv~a~gic~sD~~~~~G~~~~~~P~v~GHE~~G~V~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~  116 (202)
T d1e3ia1          37 RIQVIATCVCPTDINATDPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRN  116 (202)
T ss_dssp             EEEEEEEECCHHHHHTTCTTSCCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCC
T ss_pred             EEEEEEEEEeccccceeeeecccccccccccccceEEeeecCCceeccCCCEEEEEeeccccccccccCCcccccccccc
Confidence            68999999999996554444455789999999999999999999999999999999999999999999999999998877


Q ss_pred             cCc---ccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           81 NPV---RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        81 ~~~---~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      +..   .+.....+...+..+|....+..+.|+|+||+++++..++++|++++++.++++++++.+++.++.   .+++|
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~---~~k~G  193 (202)
T d1e3ia1         117 FKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAID---LMKEG  193 (202)
T ss_dssp             SSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCGGGGEEEEEEGGGHHHHHH---HHHTT
T ss_pred             cccCccceecccccccccccCceeeecccccCCceEEEEEehhhEEECCCCCCHHHHHHHHHHHHHHHHHHH---hCCCC
Confidence            532   233344455666778888888888899999999999999999999999988888888888887753   24689


Q ss_pred             CEEEEEC
Q 019414          158 SSVAVFG  164 (341)
Q Consensus       158 ~~vlI~G  164 (341)
                      ++|.|+.
T Consensus       194 ~~V~vi~  200 (202)
T d1e3ia1         194 KSIRTIL  200 (202)
T ss_dssp             CCSEEEE
T ss_pred             CEEEEEE
Confidence            9987763

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=1.6e-27  Score=195.53  Aligned_cols=174  Identities=49%  Similarity=0.824  Sum_probs=146.5

Q ss_pred             CchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       130 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      ++++||.++|++.|+|+++.+.++++|||+|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            46889999999999999998889999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC-CCcccccccceeeecceEEEeeecCCC
Q 019414          210 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPINVLNERTLKGTFFGNYK  288 (341)
Q Consensus       210 ~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~  288 (341)
                      +.++...+.++..+++++|++||++|++..++.++.+++++ +.++.++... ...........+.+++++.|+..++..
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            65445777777777779999999999988999999999987 7777665433 232333334445688899999887776


Q ss_pred             CCCCHHHHHHHHHCCC
Q 019414          289 PRTDLPSVVDMYMNKQ  304 (341)
Q Consensus       289 ~~~~~~~~~~~~~~~~  304 (341)
                      +.+++.++++++++||
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            5667888999998885

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.95  E-value=1.5e-28  Score=200.29  Aligned_cols=138  Identities=21%  Similarity=0.277  Sum_probs=120.2

Q ss_pred             CccccccCCcCcceeeeccC----CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG----QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~----~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||+.++++|++|+......    ..+++|+++|||++|+|+++|++++++++||||++.+..+|++|+.|+++.+++|.
T Consensus        29 lVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~  108 (171)
T d1h2ba1          29 IVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCE  108 (171)
T ss_dssp             EEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCT
T ss_pred             EEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCCCCCEEEEcCccCCCCccccccccccccc
Confidence            68999999999995443222    23468999999999999999999999999999999999999999999999999998


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      +....            ++.          .+|+|+||+.++++.++++|++++++.++++.+++.|||+++ +..++ .
T Consensus       109 ~~~~~------------g~~----------~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al-~~~~~-~  164 (171)
T d1h2ba1         109 NLEFP------------GLN----------IDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL-EKGEV-L  164 (171)
T ss_dssp             TCBCB------------TTT----------BCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHH-HTTCC-S
T ss_pred             ccccc------------eee----------cccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHH-HhcCC-C
Confidence            87653            222          246999999999999999999999998899999999999996 56777 8


Q ss_pred             CCEEEE
Q 019414          157 GSSVAV  162 (341)
Q Consensus       157 g~~vlI  162 (341)
                      |++|||
T Consensus       165 G~~VlI  170 (171)
T d1h2ba1         165 GRAVLI  170 (171)
T ss_dssp             SEEEEE
T ss_pred             CCEEEe
Confidence            999997

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=1.4e-27  Score=195.04  Aligned_cols=170  Identities=30%  Similarity=0.506  Sum_probs=145.7

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  208 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~  208 (341)
                      +|+++|+.++++++|||+++ +.++++|||+|+|+|+|++|++++|+||.+|+++|++++++++|++.++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            57899999999999999995 67899999999999999999999999999999899999999999999999999999999


Q ss_pred             CCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccce---eeecceEEEeee
Q 019414          209 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFF  284 (341)
Q Consensus       209 ~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~---~~~~~~~~g~~~  284 (341)
                      ++.+  +.+.+++.+++ ++|++|||+|+++.+++++++++++ |+++.+|.......+++....   +.+++++.++..
T Consensus        80 ~~~~--~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          80 KNGH--IEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             GGSC--HHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             cchh--HHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            8776  88999999988 9999999999988999999999998 999999987665554443322   346778887765


Q ss_pred             cCCCCCCCHHHHHHHHHCCC
Q 019414          285 GNYKPRTDLPSVVDMYMNKQ  304 (341)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~  304 (341)
                      ...+  ..++++.++++.|+
T Consensus       157 ~~~r--~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGGR--LRAERLRDMVVYNR  174 (174)
T ss_dssp             CCHH--HHHHHHHHHHHTTS
T ss_pred             CCCc--ccHHHHHHHHHcCC
Confidence            4331  34677888888774

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.94  E-value=8.4e-31  Score=218.60  Aligned_cols=164  Identities=20%  Similarity=0.223  Sum_probs=130.6

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||++++|+|++|+..........+|+++|||++|+|+++|++|++|++||||++.+..+|+.|++|+++++|.|.....
T Consensus        36 lVkv~a~giC~sDl~~~~G~~~~~~P~v~GHE~~G~Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~  115 (201)
T d1kola1          36 ILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNP  115 (201)
T ss_dssp             EEEEEEEECCHHHHHHHTTCSCCCTTCBCCCCEEEEEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCS
T ss_pred             EEEEEEEEEcchhhhhhcCCcccccceeccceeeeeeeccccccccccccceeEEeeeeeccCChhhhCCCccccccccc
Confidence            58999999999996654444455689999999999999999999999999999999999999999999999999988755


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeec--CceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~--~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                      ....+.      .++...+      ..+|+|+||+++|.  ..++++|++.+..+++++++++.++++++ ...+.+.++
T Consensus       116 ~~~~~~------~g~~~~~------~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g~  182 (201)
T d1kola1         116 ARAGGA------YGYVDMG------DWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYGE  182 (201)
T ss_dssp             SSSCEE------BTCTTSC------CBCCCSBSEEEESSHHHHCEECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHHH
T ss_pred             cccccc------ccccCCC------ccccccccEEEeehHHCeEEECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCeE
Confidence            433222      1111111      12479999999985  36999999877778888888888888875 334444443


Q ss_pred             EEEEECCCHHHHHHHHHHHHcCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGA  181 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~  181 (341)
                          +|+|++|+.++|+||.+|+
T Consensus       183 ----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         183 ----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             ----HHHTCSCEEEECTTCSSCC
T ss_pred             ----EeeCHHHHHHHHHHHHcCC
Confidence                4889999999999998885

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=4.1e-28  Score=201.91  Aligned_cols=162  Identities=34%  Similarity=0.575  Sum_probs=136.5

Q ss_pred             CccccccCCcCcceeeecc-CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|++|+....+ .....+|+++|||++|+|+++|++|+++++||||++.+..+|+.|.+|+.+.++.|+...
T Consensus        35 LVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~  114 (197)
T d2fzwa1          35 RIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIR  114 (197)
T ss_dssp             EEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTH
T ss_pred             EEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceecCCCCEEEEccccccccccccccCccccCcccc
Confidence            6899999999999665443 344578999999999999999999999999999999999999999999999999999876


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCE
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS  159 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~  159 (341)
                      .+...+. ..+....+..+|..+.++.++|+||||+++++..++++|++++++++|++++++.|++.++.....-+.+++
T Consensus       115 ~~~~~~~-~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~t  193 (197)
T d2fzwa1         115 VTQGKGL-MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRT  193 (197)
T ss_dssp             HHHHTTC-CTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEE
T ss_pred             ccccccc-cCCccceeccCCcceecccccccceeEEEechHHEEECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCE
Confidence            6432222 233445566677777777778999999999999999999999999999999999999998755555567888


Q ss_pred             EEEE
Q 019414          160 VAVF  163 (341)
Q Consensus       160 vlI~  163 (341)
                      |||+
T Consensus       194 vvvi  197 (197)
T d2fzwa1         194 VVKI  197 (197)
T ss_dssp             EEEC
T ss_pred             EEeC
Confidence            8874

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.94  E-value=1e-26  Score=190.69  Aligned_cols=175  Identities=46%  Similarity=0.873  Sum_probs=145.9

Q ss_pred             CchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       130 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      ++++||.++|++.|+|+++.+.++++|||+|||+|+|++|++++++++..|..+|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            56889999999999999999999999999999999999999999999999988999999999999999999999998876


Q ss_pred             CCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCCC
Q 019414          210 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  289 (341)
Q Consensus       210 ~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  289 (341)
                      +.++...+..+...++++|++||++|.+..+++++..+.++++.++..+..............+.+++++.|+..++..+
T Consensus        82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  161 (176)
T d2jhfa2          82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKS  161 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred             CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCCH
Confidence            55433555555555569999999999988999999999986355555555444443444344567899999998877766


Q ss_pred             CCCHHHHHHHHHCCC
Q 019414          290 RTDLPSVVDMYMNKQ  304 (341)
Q Consensus       290 ~~~~~~~~~~~~~~~  304 (341)
                      +++++++++++++||
T Consensus       162 ~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         162 KDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            678899999998875

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.94  E-value=8.8e-27  Score=190.61  Aligned_cols=172  Identities=37%  Similarity=0.701  Sum_probs=146.8

Q ss_pred             CchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       130 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      +++.||.++|++.|+|+++.+.+++++||+|+|+|+|++|++++|+++.+|+.+|++++.+++|+++++++|+++++|+.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            47899999999999999998999999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCC
Q 019414          210 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  288 (341)
Q Consensus       210 ~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  288 (341)
                      +.+. ..+.+.+.+.+ ++|++||++|.+..++.++..+.+++|+++.+|.......+.+.+..+.++.++.|+..++..
T Consensus        83 ~~~~-~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  161 (176)
T d1d1ta2          83 DSTK-PISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK  161 (176)
T ss_dssp             GCSS-CHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             ccch-HHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCCC
Confidence            6542 34455555555 999999999998888888888876559999999877666666655556678899999888776


Q ss_pred             CCCCHHHHHHHHHC
Q 019414          289 PRTDLPSVVDMYMN  302 (341)
Q Consensus       289 ~~~~~~~~~~~~~~  302 (341)
                      +++++.++++++.+
T Consensus       162 ~~~dip~li~~~~~  175 (176)
T d1d1ta2         162 SRDDVPKLVTEFLA  175 (176)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhC
Confidence            66788888887654

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.3e-27  Score=193.27  Aligned_cols=167  Identities=20%  Similarity=0.263  Sum_probs=142.4

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  207 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~  207 (341)
                      +|+++||++++++.|||++|.+..+++||++|||+|+ |++|++++|+||.+|+ +|++++++++|++.++++|++.++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5889999999999999999988899999999999996 9999999999999999 8888889999999999999999999


Q ss_pred             CCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecC
Q 019414          208 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  286 (341)
Q Consensus       208 ~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  286 (341)
                      +++.+  +.+.+++.+++ ++|++||++|+ +.+++++++++++ |+++.+|... ..+++. ...+.+++++.|+.++.
T Consensus        80 ~~~~~--~~~~i~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~-~~~~~~-~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          80 HREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRG-TIEINP-RDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             TTSTT--HHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCS-CEEECT-HHHHTTTCEEEECCGGG
T ss_pred             ccccc--HHHHhhhhhccCCceEEeecccH-HHHHHHHhccCCC-CEEEEEecCC-CCCCCH-HHHHHCCCEEEEEEecC
Confidence            98877  99999999988 99999999986 7899999999998 9999998643 233332 23356899999987654


Q ss_pred             CCCCCCHHHHHHHHHCC
Q 019414          287 YKPRTDLPSVVDMYMNK  303 (341)
Q Consensus       287 ~~~~~~~~~~~~~~~~~  303 (341)
                      .. .+++++++++++++
T Consensus       154 ~~-~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         154 ST-KEEFQQYAAALQAG  169 (174)
T ss_dssp             CC-HHHHHHHHHHHHHH
T ss_pred             CC-HHHHHHHHHHHHHH
Confidence            32 24577777777654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=4.7e-27  Score=191.67  Aligned_cols=168  Identities=23%  Similarity=0.311  Sum_probs=150.0

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  207 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~  207 (341)
                      +|+.+||+++|++.|||+++ +..++++||+|+|+|+ |++|++++|+++..|..+|++++.+++|++.++++|++.+++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999996 6689999999999995 999999999999999889999999999999999999999999


Q ss_pred             CCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecC
Q 019414          208 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  286 (341)
Q Consensus       208 ~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~  286 (341)
                      +++.+  +.+.+++.+.+ ++|++|||+|+++.+++++++++++ |+++.+|....+.+++... .+.+++++.|+..++
T Consensus        80 ~~~~~--~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          80 ASMQD--PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADLHYHAPL-ITLSEIQFVGSLVGN  155 (170)
T ss_dssp             TTTSC--HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCCCCCHHH-HHHHTCEEEECCSCC
T ss_pred             cCCcC--HHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccCccccCHHH-HHhCCcEEEEEecCC
Confidence            88776  88888888877 8999999999988999999999998 9999999887766666543 367999999988765


Q ss_pred             CCCCCCHHHHHHHHHCCC
Q 019414          287 YKPRTDLPSVVDMYMNKQ  304 (341)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~  304 (341)
                      .   ++++++++++++||
T Consensus       156 ~---~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 Q---SDFLGIMRLAEAGK  170 (170)
T ss_dssp             H---HHHHHHHHHHHTTS
T ss_pred             H---HHHHHHHHHHHcCC
Confidence            4   67999999999885

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.8e-28  Score=199.88  Aligned_cols=141  Identities=16%  Similarity=0.153  Sum_probs=118.4

Q ss_pred             CccccccCCcCcceeeecc----CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ----GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD   76 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~----~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~   76 (341)
                      |||++++|+|++|......    ....++|+++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++++|+|.
T Consensus        35 lVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~  114 (185)
T d1pl8a1          35 LLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSP  114 (185)
T ss_dssp             EEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCT
T ss_pred             EEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeeecccccceecceeccccchhhccchhchhc
Confidence            6899999999999654322    223567999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCC
Q 019414           77 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  156 (341)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  156 (341)
                      ...+...                     ...+|+|+||++++.++++++|+++++++|+.+  ++++|+++ ++..++++
T Consensus       115 ~~~~~g~---------------------~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~--pl~~a~~a-~~~~~~~~  170 (185)
T d1pl8a1         115 SIFFCAT---------------------PPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF--PLEKALEA-FETFKKGL  170 (185)
T ss_dssp             TCEETTB---------------------TTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE--EGGGHHHH-HHHHHTTC
T ss_pred             cceeeec---------------------ccccccceEEEEEchHHEEECCCCCCHHHHHHH--HHHHHHHH-HHHhCCCC
Confidence            8766421                     112379999999999999999999999987755  45677777 46678999


Q ss_pred             CCEEEEECCC
Q 019414          157 GSSVAVFGLG  166 (341)
Q Consensus       157 g~~vlI~G~g  166 (341)
                      |++||| |+|
T Consensus       171 G~~VlI-g~G  179 (185)
T d1pl8a1         171 GLKIML-KCD  179 (185)
T ss_dssp             CSEEEE-ECC
T ss_pred             CCEEEE-EeC
Confidence            999998 444

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=3.3e-27  Score=194.92  Aligned_cols=173  Identities=20%  Similarity=0.247  Sum_probs=145.0

Q ss_pred             hhhhhccccchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCC
Q 019414          132 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  210 (341)
Q Consensus       132 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~  210 (341)
                      +|||++++++.|||+++++.+++++||+|||+|+ |++|++++|+|+.+|+ +++++.+++++.+.++++|++.++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            5799999999999999999999999999999986 9999999999999999 8888888999999999999999999887


Q ss_pred             CChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC--
Q 019414          211 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY--  287 (341)
Q Consensus       211 ~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--  287 (341)
                      .+  +.+.+++.+++ ++|++||++|+ +.+++++++++++ |+++.+|..............+.+++++.+......  
T Consensus        80 ~~--~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (183)
T d1pqwa_          80 VD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK  155 (183)
T ss_dssp             ST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred             cC--HHHHHHHHhCCCCEEEEEecccc-hHHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence            76  99999999987 99999999997 7899999999998 999999865443333333333567888777653211  


Q ss_pred             -C---CCCCHHHHHHHHHCCCCCCCC
Q 019414          288 -K---PRTDLPSVVDMYMNKQLELEK  309 (341)
Q Consensus       288 -~---~~~~~~~~~~~~~~~~i~~~~  309 (341)
                       .   .++.++++++++++|++++.|
T Consensus       156 ~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         156 LQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             cCHHHHHHHHHHHHHHHHCCCCceeC
Confidence             0   124588889999999998764

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=1.7e-26  Score=190.33  Aligned_cols=170  Identities=25%  Similarity=0.345  Sum_probs=144.8

Q ss_pred             CchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       130 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      +++.+|.+.|+++|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++|+.
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~   81 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR   81 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEecc
Confidence            34567889999999999988888999999999999999999999999999998999999999999999999999999988


Q ss_pred             CCCh-hHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCccccccc--ceeeecceEEEeeec
Q 019414          210 EHDR-PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP--INVLNERTLKGTFFG  285 (341)
Q Consensus       210 ~~~~-~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~~~~~~~~~~g~~~~  285 (341)
                      +.+. ++.+.+++.+.+ ++|+||||+|++..+++++++++++ |+++++|......+++...  ..+.|++++.|++.+
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~  160 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS  160 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence            7652 345567778877 9999999999988999999999998 9999999765544444432  235689999998866


Q ss_pred             CCCCCCCHHHHHHHHHCC
Q 019414          286 NYKPRTDLPSVVDMYMNK  303 (341)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~  303 (341)
                      +.   ++++++++++++.
T Consensus       161 ~~---~~~~~~~~~i~~~  175 (182)
T d1vj0a2         161 DT---SHFVKTVSITSRN  175 (182)
T ss_dssp             CH---HHHHHHHHHHHTC
T ss_pred             CH---HHHHHHHHHHHHC
Confidence            54   5688888888765

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-25  Score=183.59  Aligned_cols=170  Identities=22%  Similarity=0.324  Sum_probs=141.3

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  208 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~  208 (341)
                      +|+++|| +.+++++||+++ +++++++||+|+|+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++
T Consensus         1 vS~e~Aa-l~epla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGA-LIEPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHH-HHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHH-HHHHHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            4778866 557899999984 67899999999999999999999999999999899999999999999999999999988


Q ss_pred             CCCChhH-HHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC
Q 019414          209 SEHDRPI-QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  287 (341)
Q Consensus       209 ~~~~~~~-~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  287 (341)
                      .+.+... .+.+....+.++|++|||+|++..++.++++++++ |+++++|......++++. ..+.|++++.|++.+  
T Consensus        79 ~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~~~~~~~~-~~~~k~l~i~Gs~~~--  154 (171)
T d1pl8a2          79 SKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTTVPLL-HAAIREVDIKGVFRY--  154 (171)
T ss_dssp             SSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSCCCCCHH-HHHHTTCEEEECCSC--
T ss_pred             cccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCCCCccCHH-HHHHCCcEEEEEeCC--
Confidence            7766222 22222333348999999999988999999999998 999999987766555553 335689999998633  


Q ss_pred             CCCCCHHHHHHHHHCCCCC
Q 019414          288 KPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       288 ~~~~~~~~~~~~~~~~~i~  306 (341)
                        .++++++++++++|+++
T Consensus       155 --~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         155 --CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             --SSCHHHHHHHHHTTSCC
T ss_pred             --HhHHHHHHHHHHcCCCC
Confidence              25799999999999873

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.93  E-value=8.2e-26  Score=185.11  Aligned_cols=173  Identities=51%  Similarity=0.871  Sum_probs=142.7

Q ss_pred             CchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       130 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      ++++||.++|++.|+|+++.+.+++++||+|+|+|+|++|++++++++..|..+|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            56889999999999999998999999999999999999999999999999998999999999999999999999999987


Q ss_pred             CCChhHHHHHHHHhc-CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCC
Q 019414          210 EHDRPIQEVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  288 (341)
Q Consensus       210 ~~~~~~~~~i~~~~~-~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  288 (341)
                      +.+. +.++.++.+. +++|++||++|+...+..++.++.++++.++..+........ .....+.+++++.|+..+++.
T Consensus        82 ~~~~-~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~-~~~~~~~~~~~i~Gs~~G~~~  159 (175)
T d1cdoa2          82 DHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA-TRPIQLIAGRTWKGSMFGGFK  159 (175)
T ss_dssp             GCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEE-ECHHHHHTTCEEEECSGGGCC
T ss_pred             Ccch-hHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccC-ccHHHHHCCcEEEEEEEeCCc
Confidence            6543 3445555554 499999999999888999999988863555555554433322 333445678899999887776


Q ss_pred             CCCCHHHHHHHHHCCC
Q 019414          289 PRTDLPSVVDMYMNKQ  304 (341)
Q Consensus       289 ~~~~~~~~~~~~~~~~  304 (341)
                      ++++++++++++++||
T Consensus       160 ~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         160 GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            6678999999999885

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=3.5e-27  Score=195.10  Aligned_cols=147  Identities=16%  Similarity=0.241  Sum_probs=118.1

Q ss_pred             CccccccCCcCcceeeeccC-CCCCCCccccccceEEEEEecCCC-CCCCCCCEEEecccC-CCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG-QTPLFPRIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~-~~~~~p~i~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~   77 (341)
                      |||+.++|+|++|+...... ....+|+|+|||++|+|+++|+++ +.+++||||.+.+.. +|+.|++|+.+++++|.+
T Consensus        37 lVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~  116 (192)
T d1piwa1          37 DIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTK  116 (192)
T ss_dssp             EEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTT
T ss_pred             EEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccc
Confidence            68999999999996543333 234689999999999999999988 569999999876654 799999999999999998


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      .........          .+     +...+|+|+||+++++..++++|+++++++|+.+...+.|||+++ +.+++++|
T Consensus       117 ~~~~~~~~~----------~~-----G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g  180 (192)
T d1piwa1         117 FVTTYSQPY----------ED-----GYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM-EKGDVRYR  180 (192)
T ss_dssp             CEESSSCBC----------TT-----SCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSE
T ss_pred             ccccccccc----------cc-----ccccccceeeEEEeehHHeEECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCC
Confidence            765421111          11     122357999999999999999999999988665544467999986 67899999


Q ss_pred             CEEEEE
Q 019414          158 SSVAVF  163 (341)
Q Consensus       158 ~~vlI~  163 (341)
                      ++|||.
T Consensus       181 ~~Vvv~  186 (192)
T d1piwa1         181 FTLVGY  186 (192)
T ss_dssp             EEEECC
T ss_pred             CEEEEE
Confidence            999975

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=4.6e-26  Score=184.96  Aligned_cols=165  Identities=23%  Similarity=0.305  Sum_probs=142.4

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  208 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~  208 (341)
                      +|+++||+++|++.|||+++ +++++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|++.++++|++.++|+
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999996 56899999999999999999999999999998 99999999999999999999999998


Q ss_pred             CCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCC
Q 019414          209 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  288 (341)
Q Consensus       209 ~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  288 (341)
                      .+.+  +.+.+++.+.+ ++.+++++++++.+++++++++++ |+++.+|......+++.. ..+.|++++.|+..++. 
T Consensus        79 ~~~~--~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~k~~~i~Gs~~~~~-  152 (166)
T d1llua2          79 RQED--PVEAIQRDIGG-AHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPGDFPTPIF-DVVLKGLHIAGSIVGTR-  152 (166)
T ss_dssp             TTSC--HHHHHHHHHSS-EEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCSSEEEEEHH-HHHHTTCEEEECCSCCH-
T ss_pred             cchh--HHHHHHHhhcC-CcccccccccchHHHHHHHHhcCC-cEEEEEEecCCCccCCHH-HHHhCCcEEEEEeecCH-
Confidence            8776  77778776654 666777777889999999999998 999999987655555443 33578999999876654 


Q ss_pred             CCCCHHHHHHHHHCC
Q 019414          289 PRTDLPSVVDMYMNK  303 (341)
Q Consensus       289 ~~~~~~~~~~~~~~~  303 (341)
                        ++++++++++++|
T Consensus       153 --~d~~e~l~l~~~G  165 (166)
T d1llua2         153 --ADLQEALDFAGEG  165 (166)
T ss_dssp             --HHHHHHHHHHHTT
T ss_pred             --HHHHHHHHHHHCc
Confidence              5799999999887

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=6.6e-26  Score=185.06  Aligned_cols=165  Identities=21%  Similarity=0.337  Sum_probs=141.6

Q ss_pred             chhhhhccccchhhhhhhhhhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          131 LDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       131 ~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      +.++|+++++++|||+++.+.. .++||++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            4678999999999999987765 489999999999999999999999999988999999999999999999999999887


Q ss_pred             CCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCC
Q 019414          210 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  288 (341)
Q Consensus       210 ~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  288 (341)
                      +.   ..+...+.+.+ ++|++||++|+...+++++++++++ |+++.+|... +.+++.. ..+.+++++.|++.+++ 
T Consensus        86 ~~---~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~-~~~~~~~-~l~~k~~~i~Gs~~~~~-  158 (172)
T d1h2ba2          86 RD---PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG-ELRFPTI-RVISSEVSFEGSLVGNY-  158 (172)
T ss_dssp             SC---HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS-CCCCCHH-HHHHTTCEEEECCSCCH-
T ss_pred             cc---HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc-cccCCHH-HHHhCCcEEEEEEecCH-
Confidence            54   45556667766 9999999999988999999999998 9999999643 3344432 33668999999987665 


Q ss_pred             CCCCHHHHHHHHHCCC
Q 019414          289 PRTDLPSVVDMYMNKQ  304 (341)
Q Consensus       289 ~~~~~~~~~~~~~~~~  304 (341)
                        .+++++++++++||
T Consensus       159 --~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         159 --VELHELVTLALQGK  172 (172)
T ss_dssp             --HHHHHHHHHHHTTS
T ss_pred             --HHHHHHHHHHHcCC
Confidence              57999999999885

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=5.2e-26  Score=186.98  Aligned_cols=130  Identities=22%  Similarity=0.292  Sum_probs=120.9

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  207 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~  207 (341)
                      +|+++||++++++.|||++|.+..+++|||+|||+|+ |++|++++|+|+..|+ +|++++++++|++.++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5899999999999999999998899999999999976 8899999999999999 8999999999999999999999999


Q ss_pred             CCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC
Q 019414          208 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  263 (341)
Q Consensus       208 ~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~  263 (341)
                      +++.+  +.+++++++++ ++|+++|++|+ +.+++++.+++++ |+++.++.....
T Consensus        80 ~~~~d--~~~~v~~~t~g~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~  132 (179)
T d1qora2          80 YREED--LVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSSGA  132 (179)
T ss_dssp             TTTSC--HHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTTCC
T ss_pred             CCCCC--HHHHHHHHhCCCCeEEEEeCccH-HHHHHHHHHHhcC-CeeeecccccCC
Confidence            98877  99999999988 99999999976 7899999999998 999999865543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.92  E-value=9.1e-25  Score=177.93  Aligned_cols=167  Identities=25%  Similarity=0.330  Sum_probs=136.6

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  208 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~  208 (341)
                      +|+++|| +.+++++||+++ ++.++++||+|+|+|+|++|++++|+||.+|+ +|++++++++|+++++++|++..++.
T Consensus         1 VS~e~Aa-l~ePla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGA-LLEPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHH-THHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHH-HHHHHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            4778866 457889999995 67899999999999999999999999999999 89999999999999999999876654


Q ss_pred             CCCCh---hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeec
Q 019414          209 SEHDR---PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG  285 (341)
Q Consensus       209 ~~~~~---~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~  285 (341)
                      +..+.   +..+.+.+..++++|++|||+|++..+++++++++++ |+++.+|.......+++. ..+.|++++.|++..
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~-~~~~k~i~i~gs~~~  155 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTVPLV-NACAREIDIKSVFRY  155 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCCCCCHH-HHHTTTCEEEECCSC
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCCCCCcCHH-HHHHCCCEEEEEECC
Confidence            43222   2445555555669999999999988999999999998 999999987655444442 335689999987532


Q ss_pred             CCCCCCCHHHHHHHHHCCC
Q 019414          286 NYKPRTDLPSVVDMYMNKQ  304 (341)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~  304 (341)
                          .++++++++++++|+
T Consensus       156 ----~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         156 ----CNDYPIALEMVASGR  170 (170)
T ss_dssp             ----SSCHHHHHHHHHTTS
T ss_pred             ----HHHHHHHHHHHHcCC
Confidence                257999999999885

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=5.1e-27  Score=195.43  Aligned_cols=159  Identities=35%  Similarity=0.582  Sum_probs=125.8

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||+.++|+|.+|+.......+..+|+++|||++|+|+++|++++++++||||++.+..+|+.|++|+++++++|+...+
T Consensus        37 lVkv~a~gICgsDlh~~~G~~~~~~P~i~GHE~~G~Vv~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~  116 (198)
T d1p0fa1          37 RIKILASGICGSDSSVLKEIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDM  116 (198)
T ss_dssp             EEEEEEEECCHHHHHHHTTSSCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCST
T ss_pred             EEEEEEEEEecccceeeeeccccccccccceeeeeeeeecCcccccCcCCCEEEEEeeccccccccccccccccchhhhc
Confidence            68999999999996655545556799999999999999999999999999999999999999999999999999998877


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ....+.. .++...+...|.........|+|+||+.+++..++++|++++.+.+++..+.+.          .+.+++.|
T Consensus       117 ~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~~~~~~~~~~~~~~~----------~v~~~~~v  185 (198)
T d1p0fa1         117 GAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLD----------QINKAFEL  185 (198)
T ss_dssp             TTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTTSCGGGGEEEEECGG----------GHHHHHHH
T ss_pred             ccccccc-CCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCCCCHHHHHHhhcchh----------hcCCCCEE
Confidence            5443332 222334456666666666679999999999999999999998776554433322          23345568


Q ss_pred             EEECCCHHHH
Q 019414          161 AVFGLGAVGL  170 (341)
Q Consensus       161 lI~G~g~~G~  170 (341)
                      ||.|+|++|+
T Consensus       186 lv~G~G~iGl  195 (198)
T d1p0fa1         186 LSSGQGVRSI  195 (198)
T ss_dssp             TTTSSCSEEE
T ss_pred             EEECCCcceE
Confidence            8888887775

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=5.1e-26  Score=185.12  Aligned_cols=170  Identities=14%  Similarity=0.118  Sum_probs=129.5

Q ss_pred             CCchhhhhccccchhhhhhh---hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce
Q 019414          129 APLDKVCILSCGVSTGLGAT---LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  204 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l---~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~  204 (341)
                      +|+++||++++++.|||+++   .+....++|++|||+|+ |++|.+++|+||.+|+ +|+++.++++|.++++++|++.
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            58899999999999999764   45678899999999986 9999999999999999 8899999999999999999999


Q ss_pred             ecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEee
Q 019414          205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTF  283 (341)
Q Consensus       205 vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~  283 (341)
                      ++|+++.   +.+.++...++++|+|||++|+ +.+++++++++++ |+++.+|...... +++. ..++.|++++.|..
T Consensus        80 vi~~~~~---~~~~~~~~~~~gvD~vid~vgg-~~~~~~l~~l~~~-Griv~~G~~~g~~~~~~~-~~~~~k~~~i~Gv~  153 (176)
T d1xa0a2          80 VLAREDV---MAERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGGAEVPTTV-HPFILRGVSLLGID  153 (176)
T ss_dssp             EEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSSSCCCCCS-HHHHHTTCEEEECC
T ss_pred             eeecchh---HHHHHHHhhccCcCEEEEcCCc-hhHHHHHHHhCCC-ceEEEeecccCcccCCCH-HHHHHCCcEEEEEe
Confidence            9988653   4444444445599999999988 7999999999998 9999999764433 3333 33467899999964


Q ss_pred             ecCCCCCCCHHHHHHHHHCCCCCC
Q 019414          284 FGNYKPRTDLPSVVDMYMNKQLEL  307 (341)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~i~~  307 (341)
                      .... +.+...++++.+. ++++|
T Consensus       154 ~~~~-~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         154 SVYC-PMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             SSSC-CHHHHHHHHHHHH-TTTCC
T ss_pred             CCcC-CHHHHHHHHHHHh-cccCC
Confidence            3221 2234445555553 65554

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=3.8e-25  Score=179.88  Aligned_cols=168  Identities=24%  Similarity=0.401  Sum_probs=144.8

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  208 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~  208 (341)
                      +|+++||++++++.|||+++ +..+++||++|||+|+|++|++++|+++..|+ +|++++++++|++.++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            58899999999999999996 56789999999999999999999999999999 89999999999999999999999999


Q ss_pred             CCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCCC
Q 019414          209 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  288 (341)
Q Consensus       209 ~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  288 (341)
                      .+.+  +.+.+++.+++..| ++++.++++.++.++++++++ |+++.+|....+..++... .+.+++++.|+..+.. 
T Consensus        79 ~~~~--~~~~~~~~~~~~~~-~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~~~~~~~~~~-~~~~~~~i~gs~~~~~-  152 (168)
T d1rjwa2          79 LKED--AAKFMKEKVGGVHA-AVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPIFD-TVLNGIKIIGSIVGTR-  152 (168)
T ss_dssp             TTSC--HHHHHHHHHSSEEE-EEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSEEEEEHHH-HHHTTCEEEECCSCCH-
T ss_pred             ccch--hhhhcccccCCCce-EEeecCCHHHHHHHHHHhccC-CceEecccccCCCCCCHHH-HHHCCcEEEEEeeCCH-
Confidence            8877  88888888876444 455666778999999999998 9999999876665554433 3678999999876543 


Q ss_pred             CCCCHHHHHHHHHCCCCC
Q 019414          289 PRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       289 ~~~~~~~~~~~~~~~~i~  306 (341)
                        ++++++++++++|+++
T Consensus       153 --~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         153 --KDLQEALQFAAEGKVK  168 (168)
T ss_dssp             --HHHHHHHHHHHTTSCC
T ss_pred             --HHHHHHHHHHHhCCCC
Confidence              6799999999999874

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=2.7e-26  Score=187.85  Aligned_cols=139  Identities=19%  Similarity=0.287  Sum_probs=116.5

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++++|++|+.......  ...+|.++|||++|+|+++|++++++++||||++.+.. .|+.|.+|+++.++.|.+
T Consensus        34 lVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~  113 (175)
T d1llua1          34 LVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCES  113 (175)
T ss_dssp             EEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTT
T ss_pred             EEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccccccCCEEEeccccccCCccccccCCccccccc
Confidence            689999999999965543322  34589999999999999999999999999999987654 799999999999999998


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      ....            |          ...+|+|+||+.+++++++++|++++++.++++.+++.|+++++ +. ...+|
T Consensus       114 ~~~~------------G----------~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t~~~~~-~~-g~~~G  169 (175)
T d1llua1         114 QQNT------------G----------YSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQM-RA-GQIEG  169 (175)
T ss_dssp             CEEB------------T----------TTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHHHHHHH-HT-TCCSS
T ss_pred             cccc------------c----------cccccccceEEEechHHEEECCCCCChhHHHHHHhHHHHHHHHH-Hh-CCCCC
Confidence            7663            1          22346999999999999999999999998888888888888874 33 34479


Q ss_pred             CEEEEE
Q 019414          158 SSVAVF  163 (341)
Q Consensus       158 ~~vlI~  163 (341)
                      ++|||+
T Consensus       170 ~~VLVl  175 (175)
T d1llua1         170 RIVLEM  175 (175)
T ss_dssp             EEEEEC
T ss_pred             CEEEeC
Confidence            999984

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.92  E-value=4.4e-28  Score=197.92  Aligned_cols=143  Identities=18%  Similarity=0.109  Sum_probs=110.3

Q ss_pred             CccccccCCcCcceeee-ccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFG-FQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~-~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++|+|++|+... ......++|+++|||++|+|+++|+++++|++||||++.+..+|+.|++|+++.++.|....
T Consensus        28 lIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~  107 (177)
T d1jqba1          28 IVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGML  107 (177)
T ss_dssp             EEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTT
T ss_pred             EEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCCcEEEeeeeccccccchhhhhhccccccc
Confidence            68999999999995433 33444578999999999999999999999999999999999999999999999999999864


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeec--CceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~--~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      .....                   +...+|+|+||+++|.  ..++++|++++.++++...   .+++..+        +
T Consensus       108 ~~~~~-------------------g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~---~~~~~~~--------~  157 (177)
T d1jqba1         108 AGWKF-------------------SNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHV---YHGFDHI--------E  157 (177)
T ss_dssp             TTCCB-------------------TTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEE---EESGGGH--------H
T ss_pred             ccccc-------------------cCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHH---HHHHHHh--------c
Confidence            42111                   1123479999999995  4689999999988765432   3333332        3


Q ss_pred             CEEEEECCCHHHHHHH
Q 019414          158 SSVAVFGLGAVGLAAA  173 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~  173 (341)
                      +.++|+|+|++|++++
T Consensus       158 ~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         158 EALLLMKDKPKDLIKA  173 (177)
T ss_dssp             HHHHHHHHCCTTCSEE
T ss_pred             CceEEECCCHHHhhee
Confidence            3467777777776543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=8.8e-26  Score=183.54  Aligned_cols=165  Identities=22%  Similarity=0.331  Sum_probs=137.7

Q ss_pred             CchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          130 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       130 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      +.+.||+++|+..|+|+++ +..+++|||+|+|+|+|++|++++|+||.+|+ +|++++++++|++.++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4577899999999999996 56899999999999999999999999999999 899999999999999999999998876


Q ss_pred             CCChhHHHHHHHHhcCCccEEEeccCChH--HHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC
Q 019414          210 EHDRPIQEVIAEMTNGGVDRSVECTGNID--NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  287 (341)
Q Consensus       210 ~~~~~~~~~i~~~~~~~~d~vld~~g~~~--~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  287 (341)
                      +.+ ++.    +...+++|+++||+++..  .+++++++++++ |+++.+|.......++..+ ++.|++++.|+..++.
T Consensus        80 ~~~-~~~----~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~k~~~i~Gs~~g~~  152 (168)
T d1piwa2          80 EEG-DWG----EKYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHEMLSLKP-YGLKAVSISYSALGSI  152 (168)
T ss_dssp             GTS-CHH----HHSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSCCEEECG-GGCBSCEEEECCCCCH
T ss_pred             chH-HHH----HhhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccccccHHH-HHhCCcEEEEEeeCCH
Confidence            543 133    233458999999987643  467899999998 9999999877666555543 3678999999887654


Q ss_pred             CCCCCHHHHHHHHHCCCCC
Q 019414          288 KPRTDLPSVVDMYMNKQLE  306 (341)
Q Consensus       288 ~~~~~~~~~~~~~~~~~i~  306 (341)
                         ++++++++++++|+|+
T Consensus       153 ---~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         153 ---KELNQLLKLVSEKDIK  168 (168)
T ss_dssp             ---HHHHHHHHHHHHTTCC
T ss_pred             ---HHHHHHHHHHHhCCCC
Confidence               6899999999999873

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.92  E-value=9.9e-26  Score=187.99  Aligned_cols=159  Identities=36%  Similarity=0.574  Sum_probs=128.0

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||+.++|+|.+|+..........+|+++|||++|+|+++|++++++++||||++.+..+|+.|.+|+++.++.|.....
T Consensus        37 lVkV~a~giC~sDl~~~~G~~~~~~P~i~GHE~~G~Vv~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~  116 (198)
T d2jhfa1          37 RIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL  116 (198)
T ss_dssp             EEEEEEEECCHHHHHHHHTSSCCCSSBCCCCSEEEEEEEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSS
T ss_pred             EEEEEEEecccccceeecCCcccccceecccceeEEEEecCccccCcCCCCEEEEeeeecccccccccCCccceeccccc
Confidence            68999999999996665555556789999999999999999999999999999999999999999999999999999877


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCCEE
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  160 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~v  160 (341)
                      ....+. ..+...++..+|..+.+..+.|+|+||+++++.+++++|+.++++.++....++.+....   ...+++|++|
T Consensus       117 ~~~~g~-~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~V  192 (198)
T d2jhfa1         117 SMPRGT-MQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINEG---FDLLRSGESI  192 (198)
T ss_dssp             SSCCCS-CTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTTSCCGGGEEEEEEGGGHHHH---HHHHHTTCCS
T ss_pred             cccCcc-ccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCCCCHHHHHHHHHHHHhhhhC---CceeeCCCEE
Confidence            644332 233345566777777777778999999999999999999999887665544443332221   2346789988


Q ss_pred             EEE
Q 019414          161 AVF  163 (341)
Q Consensus       161 lI~  163 (341)
                      +|+
T Consensus       193 aVi  195 (198)
T d2jhfa1         193 RTI  195 (198)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            775

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.91  E-value=6.6e-25  Score=180.71  Aligned_cols=164  Identities=16%  Similarity=0.190  Sum_probs=134.1

Q ss_pred             hhccccchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh
Q 019414          135 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  213 (341)
Q Consensus       135 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~  213 (341)
                      +++++++.|||++|.+..++++||+|||+|+ |++|++++|+||..|+ +||++++++++.++++++|+++++++++.+ 
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~-   85 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVN-   85 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCS-
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccccc-
Confidence            4677889999999999999999999999987 8999999999999999 999999999999999999999999988776 


Q ss_pred             hHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-----cccccc-cceeeecceEEEeeecC
Q 019414          214 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-----AVFMTK-PINVLNERTLKGTFFGN  286 (341)
Q Consensus       214 ~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-----~~~~~~-~~~~~~~~~~~g~~~~~  286 (341)
                       +.+.+++.+.+ ++|+|||++|+ +.+++++++++++ |+++.+|.....     .+.... ...+.|++++.|+....
T Consensus        86 -~~~~~~~~~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          86 -SLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             -CHHHHHHHHCTTCEEEEEESSCH-HHHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             -HHHHHHHHhhcCCCceeEEecCc-hhhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence             67777776666 99999999986 7999999999998 999999864221     111111 12356899999987765


Q ss_pred             CCCC---CCHHHHHHHHHCC
Q 019414          287 YKPR---TDLPSVVDMYMNK  303 (341)
Q Consensus       287 ~~~~---~~~~~~~~~~~~~  303 (341)
                      +...   +.++++++++++|
T Consensus       163 ~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         163 WQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT
T ss_pred             cChHHHHHHHHHHHHHHhCc
Confidence            5321   3467778887765

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.8e-25  Score=180.62  Aligned_cols=166  Identities=20%  Similarity=0.279  Sum_probs=133.4

Q ss_pred             CCCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC
Q 019414          128 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  207 (341)
Q Consensus       128 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~  207 (341)
                      +.+++.+|+++|+..|+|+++ +.++++|||+|+|+|+|++|++++|+||.+|+ ++++++++++++++++++|++.+++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEE
Confidence            445678889999999999996 67899999999999999999999999999999 6778889999999999999999998


Q ss_pred             CCCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeeecCC
Q 019414          208 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  287 (341)
Q Consensus       208 ~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  287 (341)
                      +.+.+  ..    ....+++|++||++|++..++.++++++++ |+++.+|..............+.+++++.|+..++.
T Consensus        81 ~~~~~--~~----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~  153 (168)
T d1uufa2          81 SRNAD--EM----AAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGI  153 (168)
T ss_dssp             TTCHH--HH----HTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC-------CHHHHHTTTCEEEECCSCCH
T ss_pred             Cchhh--HH----HHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCH
Confidence            87643  11    122248999999999988899999999998 999999976543322222333568999999887654


Q ss_pred             CCCCCHHHHHHHHHCCCC
Q 019414          288 KPRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       288 ~~~~~~~~~~~~~~~~~i  305 (341)
                         .+++++++++++++|
T Consensus       154 ---~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         154 ---PETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHcCC
Confidence               678999999987654

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=1.8e-25  Score=183.12  Aligned_cols=142  Identities=18%  Similarity=0.240  Sum_probs=111.2

Q ss_pred             CccccccCCcCcceeeeccCCC-CCCCccccccceEEEEEecCCCCC-----CCCCCEEEecccCCCCCChhhcCCCC-C
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQT-PLFPRIFGHEAAGVVESVGEGVSD-----LEVGDHVLPVFTGECGDCRHCRSDVS-N   73 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~-----~~~Gd~V~~~~~~~c~~c~~c~~~~~-~   73 (341)
                      |||++++|+|++|+........ .++|+++|||++|+|+++|++|++     +++||||++.+..+|+.|++|+.+++ +
T Consensus        33 lVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~  112 (184)
T d1vj0a1          33 LVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPY  112 (184)
T ss_dssp             EEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGG
T ss_pred             EEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccccccccceeeeEeccccccccChhHhCccccc
Confidence            6899999999999554333232 368999999999999999999864     68999999999999999999999975 5


Q ss_pred             CCccccccCcccccccCCCcccccCCCccccccCCCcccceEEee-cCceEECCCCCCchhhhhccccchhhhhhhhhhc
Q 019414           74 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA  152 (341)
Q Consensus        74 ~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~-~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~  152 (341)
                      .|.+...+...+..     ..+         ...+|+|+||+.++ +.+++++|++++.+.      ++++|+++ ++.+
T Consensus       113 ~c~~~~~~G~~~~~-----~~~---------~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~------pl~~A~~a-~~~~  171 (184)
T d1vj0a1         113 LCPNRKVYGINRGC-----SEY---------PHLRGCYSSHIVLDPETDVLKVSEKITHRL------PLKEANKA-LELM  171 (184)
T ss_dssp             GCTTCEETTTTCCS-----SST---------TCCCSSSBSEEEECTTCCEEEECTTCCEEE------EGGGHHHH-HHHH
T ss_pred             cCCCceeeccCCCC-----CCC---------CCcceeCcCcEEechhHcEEECCCCCCHHH------HHHHHHHH-HHHh
Confidence            68887665321110     000         11247999999996 579999999998653      45677877 4678


Q ss_pred             CCCCCCEEEEE
Q 019414          153 KPERGSSVAVF  163 (341)
Q Consensus       153 ~~~~g~~vlI~  163 (341)
                      ++++|++|||+
T Consensus       172 ~~~~G~~VlI~  182 (184)
T d1vj0a1         172 ESREALKVILY  182 (184)
T ss_dssp             HHTSCSCEEEE
T ss_pred             CCCcCCEEEEe
Confidence            99999999997

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.90  E-value=5.5e-25  Score=180.27  Aligned_cols=138  Identities=20%  Similarity=0.270  Sum_probs=109.7

Q ss_pred             CccccccCCcCcceeeeccC---------CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCC
Q 019414            1 MLSQKHNSFNPRNFVFGFQG---------QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDV   71 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~---------~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~   71 (341)
                      |||++++|+|+.|+......         ...++|+|+|||++|+|+++|+++++|++||||++.+..+|+.|++|++++
T Consensus        29 lVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~  108 (177)
T d1jvba1          29 LIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGE  108 (177)
T ss_dssp             EEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTC
T ss_pred             EEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccCccccccCceEeeeecccccccccccccc
Confidence            68999999999996543221         234689999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecC-ceEECCCCCCchhhhhccccchhhhhhhhh
Q 019414           72 SNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLN  150 (341)
Q Consensus        72 ~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~-~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~  150 (341)
                      ++.|.+...+.            +          ..+|+||||++++.. .++++|+..+.+.|+.+.+++.++++++ +
T Consensus       109 ~~~c~~~~~~g------------~----------~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~a~~~~-~  165 (177)
T d1jvba1         109 EHLCDSPRWLG------------I----------NFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNL-E  165 (177)
T ss_dssp             GGGCSSCEEBT------------T----------TBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHHHHHHH-H
T ss_pred             ccccCCcceee------------e----------ccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHHHHHHH-H
Confidence            99999876531            1          123699999999765 4666666655555544557888998885 4


Q ss_pred             hcCCCCCCEEEE
Q 019414          151 VAKPERGSSVAV  162 (341)
Q Consensus       151 ~~~~~~g~~vlI  162 (341)
                      ..++ .|++|||
T Consensus       166 ~~~~-~G~~VlI  176 (177)
T d1jvba1         166 NFKA-IGRQVLI  176 (177)
T ss_dssp             TTCC-CSEEEEE
T ss_pred             hhcc-cCCceEC
Confidence            5555 5899987

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.90  E-value=9e-25  Score=178.07  Aligned_cols=139  Identities=24%  Similarity=0.388  Sum_probs=112.7

Q ss_pred             CccccccCCcCcceeeecc--CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEeccc-CCCCCChhhcCCCCCCCcc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ--GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDL   77 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~--~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~   77 (341)
                      |||++++|+|++|+.....  .....+|+++|||++|+|+++|++++++++||||++.+. ..|+.|..|+++.+|.|..
T Consensus        29 lVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~  108 (171)
T d1rjwa1          29 LVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEH  108 (171)
T ss_dssp             EEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTT
T ss_pred             EEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceeeeEEeeccccccccccccccCCCcccccc
Confidence            6899999999999654433  344568999999999999999999999999999988654 4699999999999999998


Q ss_pred             ccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCC
Q 019414           78 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                      .....                      ...+|+|+||+++++++++++|++++++.|+ +. ++.++++++. .+.+ +|
T Consensus       109 ~~~~g----------------------~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~~~~-~~~~-~G  162 (171)
T d1rjwa1         109 QKNAG----------------------YSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFDRML-KGQI-NG  162 (171)
T ss_dssp             CEEBT----------------------TTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHHHHH-TTCC-SS
T ss_pred             ccccc----------------------eeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHHHHH-hcCC-CC
Confidence            76631                      2234799999999999999999999987654 43 4566776643 3455 59


Q ss_pred             CEEEEECC
Q 019414          158 SSVAVFGL  165 (341)
Q Consensus       158 ~~vlI~G~  165 (341)
                      ++|||+|.
T Consensus       163 ~tVlViG~  170 (171)
T d1rjwa1         163 RVVLTLED  170 (171)
T ss_dssp             EEEEECCC
T ss_pred             CEEEEeCC
Confidence            99999985

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=3.2e-24  Score=174.58  Aligned_cols=146  Identities=18%  Similarity=0.258  Sum_probs=117.8

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  207 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~  207 (341)
                      +|+++||++++++.|||+++. ..+++|||+|||+|+ |++|++++|+||..|+ +|++++++++|++.++++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            578999999999999999974 589999999999986 9999999999999999 8999999999999999999999998


Q ss_pred             CCCCChhHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCc-ccccccceeeecceEEEeeec
Q 019414          208 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNERTLKGTFFG  285 (341)
Q Consensus       208 ~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~  285 (341)
                      +.+    ..+   +.+.+ ++|+|||++|  +.+++++++++++ |+++.+|...... +++. ...+.|++++.|+...
T Consensus        79 ~~~----~~~---~~~~~~g~D~v~d~~G--~~~~~~~~~l~~~-G~~v~~G~~~g~~~~~~~-~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          79 YAE----VPE---RAKAWGGLDLVLEVRG--KEVEESLGLLAHG-GRLVYIGAAEGEVAPIPP-LRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GGG----HHH---HHHHTTSEEEEEECSC--TTHHHHHTTEEEE-EEEEEC-------CCCCT-THHHHTTCEEEECCHH
T ss_pred             hhh----hhh---hhhccccccccccccc--hhHHHHHHHHhcC-CcEEEEeCCCCCCCCccH-HHHHHCCcEEEEEeCc
Confidence            754    333   33334 8999999987  4689999999998 9999999764332 2332 2336789999998765


Q ss_pred             CC
Q 019414          286 NY  287 (341)
Q Consensus       286 ~~  287 (341)
                      .+
T Consensus       148 ~~  149 (171)
T d1iz0a2         148 PL  149 (171)
T ss_dssp             HH
T ss_pred             Ch
Confidence            44

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=5.8e-24  Score=176.00  Aligned_cols=172  Identities=17%  Similarity=0.230  Sum_probs=130.9

Q ss_pred             CCchhhhhccccchhhhhhhhhhcCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCCEEEEEcCCh----hhHHHHHHcCC
Q 019414          129 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAKKFGV  202 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~-G~-g~~G~~a~~la~~~g~~~vv~v~~~~----~~~~~~~~~g~  202 (341)
                      +|+++||++++++.|||++|.+..+++||++++|+ |+ |++|++++|+||.+|+ +||++.++.    ++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            58899999999999999999999999999999997 55 9999999999999999 777765443    45667889999


Q ss_pred             ceecCCCCC-ChhHHHHHHHHh---cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecc
Q 019414          203 TDFVNTSEH-DRPIQEVIAEMT---NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNER  277 (341)
Q Consensus       203 ~~vv~~~~~-~~~~~~~i~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~  277 (341)
                      ++++++++. ..++.+.+++.+   ++++|++||++|+ +.++.++++++++ |+++.+|..... ..++.. ..+.|++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~-~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNN-GLMLTYGGMSFQPVTIPTS-LYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTT-CEEEECCCCSSCCEEECHH-HHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCC-cEEEEECCccCCCccCcHH-HHHHCCc
Confidence            999987532 122455555543   4489999999986 6889999999998 999999965443 233332 2356899


Q ss_pred             eEEEeeecCCCC------CCCHHHHHHHHHCCC
Q 019414          278 TLKGTFFGNYKP------RTDLPSVVDMYMNKQ  304 (341)
Q Consensus       278 ~~~g~~~~~~~~------~~~~~~~~~~~~~~~  304 (341)
                      ++.|+++..+..      .+.++++++++++|+
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            999976543211      134667777777764

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=9.5e-24  Score=174.35  Aligned_cols=172  Identities=19%  Similarity=0.197  Sum_probs=128.9

Q ss_pred             CCCchhhhhccccchhhhhhhhhhcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHHcCCc
Q 019414          128 LAPLDKVCILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVT  203 (341)
Q Consensus       128 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~  203 (341)
                      ++|+.+. +++++..|||+++++..++++|  ++|||+|+ |++|++++|+||.+|+++|+++++++++.. +.+++|++
T Consensus         1 ~~~~~~g-alg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLG-AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGT-TTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHH-HhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            3556664 3677899999999999999987  88999986 999999999999999978887776766554 56689999


Q ss_pred             eecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccc--------cceee
Q 019414          204 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTK--------PINVL  274 (341)
Q Consensus       204 ~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~--------~~~~~  274 (341)
                      .++|+.+++  +.+.+++.++.|+|+|||++|+ +.+++++++++++ |+++.+|..... ...+..        .....
T Consensus        80 ~vi~~~~~~--~~~~~~~~~~~GvDvv~D~vGg-~~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          80 AAVNYKTGN--VAEQLREACPGGVDVYFDNVGG-DISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EEEETTSSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHH
T ss_pred             EEeeccchh--HHHHHHHHhccCceEEEecCCc-hhHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            999998887  9999999988899999999986 7899999999998 999999864321 111110        11234


Q ss_pred             ecceEEEeeecCCCC--CCCHHHHHHHHHCCC
Q 019414          275 NERTLKGTFFGNYKP--RTDLPSVVDMYMNKQ  304 (341)
Q Consensus       275 ~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~  304 (341)
                      |++++.|+.+..+..  .+.++++++++.+|+
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            777888776554422  134666777777764

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=6.8e-23  Score=169.88  Aligned_cols=166  Identities=23%  Similarity=0.213  Sum_probs=134.3

Q ss_pred             hhhhhccccchhhhhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC
Q 019414          132 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  211 (341)
Q Consensus       132 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~  211 (341)
                      ++.++|+++++|||+++ +.+++++||+|||+|+|++|++++++|+..|+.+|++++.+++|++.++++|+++++++.+.
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~   80 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDT   80 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSS
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCc
Confidence            56788999999999995 67999999999999999999999999999999899999999999999999999999998877


Q ss_pred             ChhHHHHHHHHhcC-CccEEEeccCC---------------hHHHHHHHHHhcCCCcEEEEEccCCCCcccccc------
Q 019414          212 DRPIQEVIAEMTNG-GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK------  269 (341)
Q Consensus       212 ~~~~~~~i~~~~~~-~~d~vld~~g~---------------~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~------  269 (341)
                      +  +.+.+++++++ ++|++||++|.               ++.++.++++++++ |+++.+|......+....      
T Consensus        81 ~--~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~~  157 (195)
T d1kola2          81 P--LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIG  157 (195)
T ss_dssp             C--HHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTT
T ss_pred             C--HHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhcC
Confidence            6  99999999988 99999999983               46899999999998 999999976543221111      


Q ss_pred             ------cceeeecceEEEeeecCCCCCCCHHHHHHHHHCCC
Q 019414          270 ------PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQ  304 (341)
Q Consensus       270 ------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  304 (341)
                            ...+.|++++.+.   ....++.++++++++.+++
T Consensus       158 ~~~~~~~~~~~k~~~i~~g---~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         158 SLSIRFGLGWAKSHSFHTG---QTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCCCHHHHHHTTCEEEES---SCCHHHHHHHHHHHHHTTS
T ss_pred             ceeeeHHHHHhhcceeccC---CCchHHHHHHHHHHHHcCC
Confidence                  1123456665431   1111234677888877653

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=3.2e-24  Score=175.21  Aligned_cols=132  Identities=20%  Similarity=0.222  Sum_probs=99.5

Q ss_pred             CccccccCCcCcceeeeccC-CCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccC-CCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQG-QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~-~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|++|+...... ....+|+|+|||++|+|+++|++|+++++||||.+++.. +|+.|++|+++++|+|++.
T Consensus        29 lVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~  108 (179)
T d1uufa1          29 KIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHM  108 (179)
T ss_dssp             EEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTC
T ss_pred             EEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCCEEEEcccccccCccccccCcccccCCCc
Confidence            68999999999996443333 345689999999999999999999999999999887654 8999999999999999986


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  149 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~  149 (341)
                      ...-....              ........|+|+||+.+++++++++|+......   +..++.++++++.
T Consensus       109 ~~~~~~~~--------------~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~---~a~~l~~a~~a~~  162 (179)
T d1uufa1         109 TGTYNSPT--------------PDEPGHTLGGYSQQIVVHERYVLRIRVADIEMI---RADQINEAYERML  162 (179)
T ss_dssp             EETTTSBC--------------SSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEE---CGGGHHHHHHHHH
T ss_pred             cccccccC--------------CCCCcccccccceEEEechHHEEECCCCCcChh---HhchhHHHHHHHH
Confidence            54211000              000112247999999999999999996653322   2235567777653

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.6e-23  Score=165.13  Aligned_cols=115  Identities=19%  Similarity=0.261  Sum_probs=101.7

Q ss_pred             CccccccCCcCcceeeecc--CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ--GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~--~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++++|+.|......  ...+.+|.++|||++|+|+++|+++++|++||||++.+..                   
T Consensus        34 lVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~~-------------------   94 (150)
T d1yb5a1          34 LIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTI-------------------   94 (150)
T ss_dssp             EEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTTCCTTCEEEESCCS-------------------
T ss_pred             EEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeeccccCccccccccc-------------------
Confidence            6899999999999665432  2334679999999999999999999999999999976421                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|+||++++++.++++|+++++++||+++++..|+|++++..+..++|+
T Consensus        95 -----------------------------~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~  145 (150)
T d1yb5a1          95 -----------------------------SGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGK  145 (150)
T ss_dssp             -----------------------------SCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSE
T ss_pred             -----------------------------cccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCC
Confidence                                         379999999999999999999999999999999999999999889999999


Q ss_pred             EEEEE
Q 019414          159 SVAVF  163 (341)
Q Consensus       159 ~vlI~  163 (341)
                      ++||+
T Consensus       146 ~vliL  150 (150)
T d1yb5a1         146 MILLL  150 (150)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            99974

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=8.5e-22  Score=155.94  Aligned_cols=113  Identities=21%  Similarity=0.262  Sum_probs=93.0

Q ss_pred             CccccccCCcCcceeeeccCC-CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCcccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR   79 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~   79 (341)
                      |||++++++|+.|+....... .+.+|.++|||++|+|+++|+++++|++||||+....                     
T Consensus        31 lVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~~~~~---------------------   89 (147)
T d1qora1          31 QVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQS---------------------   89 (147)
T ss_dssp             EEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEESCC---------------------
T ss_pred             EEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeecccccccceeeeecc---------------------
Confidence            689999999999976644332 4568999999999999999999999999999974421                     


Q ss_pred             ccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhh--hhccccchhhhhhhhhhcCCCCC
Q 019414           80 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV--CILSCGVSTGLGATLNVAKPERG  157 (341)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~a--a~l~~~~~ta~~~l~~~~~~~~g  157 (341)
                                                 ..|+|+||++++.+.++++|++++++.+  ++++...+++++++++ .++++|
T Consensus        90 ---------------------------~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G  141 (147)
T d1qora1          90 ---------------------------ALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQG  141 (147)
T ss_dssp             ---------------------------SSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCB
T ss_pred             ---------------------------ccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCC
Confidence                                       2379999999999999999999988755  4556666777777654 679999


Q ss_pred             CEEEE
Q 019414          158 SSVAV  162 (341)
Q Consensus       158 ~~vlI  162 (341)
                      ++|||
T Consensus       142 ~~VLI  146 (147)
T d1qora1         142 SSLLI  146 (147)
T ss_dssp             CCEEE
T ss_pred             CEEEe
Confidence            99997

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=4e-22  Score=162.23  Aligned_cols=148  Identities=15%  Similarity=0.172  Sum_probs=118.7

Q ss_pred             CCchhhhhccccchhhhhhhh---hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce
Q 019414          129 APLDKVCILSCGVSTGLGATL---NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  204 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~  204 (341)
                      +|+.+||+++++..|||++++   +....+++++|||+|+ |++|++++|+||.+|+ +||++.++++|.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578999999999999998754   3344556679999986 9999999999999999 8889989999999999999999


Q ss_pred             ecCCCCCChhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCC-cccccccceeeecceEEEee
Q 019414          205 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTF  283 (341)
Q Consensus       205 vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~  283 (341)
                      ++|+++.+  +.   +.+....+|.++|++|+ +.++..+++++++ |+++.+|..... .+++. ...+.|++++.|+.
T Consensus        80 vi~~~~~~--~~---~~l~~~~~~~vvD~Vgg-~~~~~~l~~l~~~-Griv~~G~~~~~~~~~~~-~~~~~k~~~i~G~~  151 (177)
T d1o89a2          80 VLPRDEFA--ES---RPLEKQVWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGGFTLPTTV-MPFILRNVRLQGVD  151 (177)
T ss_dssp             EEEGGGSS--SC---CSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTCSCCCCCS-HHHHHHCCEEEECC
T ss_pred             ccccccHH--HH---HHHHhhcCCeeEEEcch-HHHHHHHHHhccc-cceEeecccCCccccccH-HHHHHCCCeEEEEe
Confidence            99987654  22   22233468999999987 7899999999998 999999976543 22222 33467899999975


Q ss_pred             ec
Q 019414          284 FG  285 (341)
Q Consensus       284 ~~  285 (341)
                      ..
T Consensus       152 ~~  153 (177)
T d1o89a2         152 SV  153 (177)
T ss_dssp             SS
T ss_pred             cc
Confidence            43

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.80  E-value=1.3e-20  Score=151.62  Aligned_cols=138  Identities=17%  Similarity=0.168  Sum_probs=107.3

Q ss_pred             chhhh---hhhhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHH
Q 019414          141 VSTGL---GATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQ  216 (341)
Q Consensus       141 ~~ta~---~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~  216 (341)
                      ..|||   ++|.+....+++++|||+|+ |++|++++|+||.+|+ +||++.++++|.+.++++|++.++++++..   .
T Consensus         5 GlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~~---~   80 (167)
T d1tt7a2           5 GFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY---D   80 (167)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---S
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccchh---c
Confidence            45665   44555566778889999986 9999999999999999 899999999999999999999998765321   1


Q ss_pred             HHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccceeeecceEEEeee
Q 019414          217 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF  284 (341)
Q Consensus       217 ~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~  284 (341)
                      +.+....++++|+|||++|+ +.+++++++++++ |+++.+|.............++.|++++.|...
T Consensus        81 ~~~~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~-G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~  146 (167)
T d1tt7a2          81 GTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGGGEVPATVYPFILRGVSLLGIDS  146 (167)
T ss_dssp             SCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSCSCEEECSHHHHTSCCEEEECCS
T ss_pred             hhhhcccCCCceEEEecCcH-HHHHHHHHHhccC-ceEEEeeccCCCcccCCHHHHHHCCcEEEEEec
Confidence            12222333499999999987 7999999999998 999999987654322222334679999999653

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.78  E-value=6.6e-20  Score=145.68  Aligned_cols=117  Identities=16%  Similarity=0.133  Sum_probs=94.9

Q ss_pred             CccccccCCcCcceeeecc--CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ--GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~--~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|++|+.....  ...+.+|+++|+|++|+|++  .+++.+++||+|+.....                   
T Consensus        34 lVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~-------------------   92 (152)
T d1xa0a1          34 LVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYE-------------------   92 (152)
T ss_dssp             EEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSCCTTCEEEEESTT-------------------
T ss_pred             EEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCccccCCEEEEecCc-------------------
Confidence            6899999999999554322  22346899999999999999  567889999999866211                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                    .          +....|+||||+.+|++.++++|+++| .+||+++++..|++.++....+++ |+
T Consensus        93 --------------~----------~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~  146 (152)
T d1xa0a1          93 --------------I----------GVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GR  146 (152)
T ss_dssp             --------------B----------TTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SE
T ss_pred             --------------c----------ccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CC
Confidence                          0          011237999999999999999999998 578889999999999988888886 99


Q ss_pred             EEEEEC
Q 019414          159 SVAVFG  164 (341)
Q Consensus       159 ~vlI~G  164 (341)
                      +|||+|
T Consensus       147 tVL~l~  152 (152)
T d1xa0a1         147 TVVRLA  152 (152)
T ss_dssp             EEEECC
T ss_pred             EEEEcC
Confidence            999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.75  E-value=9.2e-20  Score=140.57  Aligned_cols=101  Identities=18%  Similarity=0.186  Sum_probs=85.9

Q ss_pred             CccccccCCcCcceeeecc--CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ--GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~--~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++++|+|+.|......  ...+.+|+++|||++|+|           +||||+....                    
T Consensus        29 lVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vGd~V~~~~~--------------------   77 (131)
T d1iz0a1          29 VLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EGRRYAALVP--------------------   77 (131)
T ss_dssp             EEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TTEEEEEECS--------------------
T ss_pred             EEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------ccceEEEEec--------------------
Confidence            6899999999999765433  233568999999999999           3999987631                    


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                                   .|+|+||+++++++++++|+++++++||++++++.|||++|.+++  +.|+
T Consensus        78 -----------------------------~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~  126 (131)
T d1iz0a1          78 -----------------------------QGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGK  126 (131)
T ss_dssp             -----------------------------SCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBE
T ss_pred             -----------------------------cCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCC
Confidence                                         379999999999999999999999999999999999999987766  4589


Q ss_pred             EEEEE
Q 019414          159 SVAVF  163 (341)
Q Consensus       159 ~vlI~  163 (341)
                      +||++
T Consensus       127 tvl~l  131 (131)
T d1iz0a1         127 VVVRL  131 (131)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            98863

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.70  E-value=1.6e-19  Score=145.02  Aligned_cols=119  Identities=18%  Similarity=0.196  Sum_probs=94.3

Q ss_pred             CccccccCCcCcceeeeccCC--CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++|+|+|++|++......  .+.+|.++|+|++|+|++  +.+.++++||+|+.....                   
T Consensus        34 LVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~~~~g~~v~~~~~~-------------------   92 (162)
T d1tt7a1          34 LIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYE-------------------   92 (162)
T ss_dssp             EEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTTCCTTCEEEEESTT-------------------
T ss_pred             EEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccccccceeeEeeecc-------------------
Confidence            689999999999966543332  235789999999999998  567889999999876321                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhhhhcCCCCCC
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS  158 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~  158 (341)
                                    .+          ....|+|+||+.+|++.++++|+++|+++||++++..+|||+++.. .++..++
T Consensus        93 --------------~g----------~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~  147 (162)
T d1tt7a1          93 --------------LG----------VSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSLE-ETPGALK  147 (162)
T ss_dssp             --------------BT----------TTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECST-THHHHHH
T ss_pred             --------------ce----------eccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCCC
Confidence                          01          1124799999999999999999999999999999999999987543 3455557


Q ss_pred             EEEEECC
Q 019414          159 SVAVFGL  165 (341)
Q Consensus       159 ~vlI~G~  165 (341)
                      +|||+|+
T Consensus       148 ~Vli~ga  154 (162)
T d1tt7a1         148 DILQNRI  154 (162)
T ss_dssp             HTTTTCC
T ss_pred             EEEEECC
Confidence            7887765

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=4.4e-18  Score=133.68  Aligned_cols=102  Identities=15%  Similarity=0.074  Sum_probs=82.3

Q ss_pred             CccccccCCcCcceeeecc--CCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQ--GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL   78 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~--~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~   78 (341)
                      |||++|+|+||.|.+....  .....+|.++|+|++|+|+++|.  ..+++||+|++....                   
T Consensus        31 lVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~~g~~v~~~~~~-------------------   89 (146)
T d1o89a1          31 TVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFHAGQEVLLTGWG-------------------   89 (146)
T ss_dssp             EEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCCTTCEEEEECTT-------------------
T ss_pred             EEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCccceeeEEeeccc-------------------
Confidence            6899999999999654322  33456899999999999999866  479999999876311                   


Q ss_pred             cccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhh
Q 019414           79 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA  147 (341)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  147 (341)
                                    .          +...+|+||||+++|+++++++|+++|+++||+++++..||+.+
T Consensus        90 --------------~----------g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1          90 --------------V----------GENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAII  134 (146)
T ss_dssp             --------------B----------TTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHH
T ss_pred             --------------c----------eecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence                          0          11124799999999999999999999999999999888888654

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.67  E-value=1.3e-19  Score=147.59  Aligned_cols=124  Identities=18%  Similarity=0.055  Sum_probs=100.1

Q ss_pred             CccccccCCcCcceeeeccCC-----------CCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcC
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQ-----------TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS   69 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~-----------~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~   69 (341)
                      |||++++++|+.|+.+.....           ...+|.++|+|++|+|+++|.+++.++.||+|...+.           
T Consensus        37 lVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~V~~~~~~~~~~~~g~~v~~~~~-----------  105 (175)
T d1gu7a1          37 IVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHV-----------  105 (175)
T ss_dssp             EEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEEEEEECTTCCSCCTTCEEEESSS-----------
T ss_pred             EEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccccccccccccccccccceecccc-----------
Confidence            689999999999976532211           1246789999999999999999999999999986632           


Q ss_pred             CCCCCCccccccCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCchhhhhccccchhhhhhhh
Q 019414           70 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  149 (341)
Q Consensus        70 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~  149 (341)
                                                           ..|+|+||+.+++++++++|++++.+.  ++++...|||+++.
T Consensus       106 -------------------------------------~~g~~aey~~v~~~~~~~iP~~~~~~~--a~~~~~~ta~~~l~  146 (175)
T d1gu7a1         106 -------------------------------------NFGTWRTHALGNDDDFIKLPNPAQSKA--NGKPNGLTDAKSIE  146 (175)
T ss_dssp             -------------------------------------CCCCSBSEEEEEGGGEEEECCHHHHHH--TTCSCCCCCCCCEE
T ss_pred             -------------------------------------ccccccceeeehhhhccCCCccchhhh--hccchHHHHHHHHH
Confidence                                                 136899999999999999999875443  44567789998876


Q ss_pred             h-hcCCCCCCEEEEEC-C-CHHHHHHHH
Q 019414          150 N-VAKPERGSSVAVFG-L-GAVGLAAAE  174 (341)
Q Consensus       150 ~-~~~~~~g~~vlI~G-~-g~~G~~a~~  174 (341)
                      . ..+++||++|||+| + |++|++++|
T Consensus       147 ~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         147 TLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             EECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             HHhcCCCCCCEEEEECccchhhhheEEe
Confidence            4 46799999999996 4 779988776

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=3.5e-15  Score=102.28  Aligned_cols=73  Identities=19%  Similarity=0.245  Sum_probs=66.0

Q ss_pred             CCchhhhhccccchhhhhhhh---hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC
Q 019414          129 APLDKVCILSCGVSTGLGATL---NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  202 (341)
Q Consensus       129 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~  202 (341)
                      +|+++|+++++++.|||++++   +....+++++|||+|+ |++|.+++|++|.+|+ +|+++.+++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            578999999999999998765   4456789999999986 9999999999999999 89999899999999999985

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.00  E-value=2.5e-10  Score=88.42  Aligned_cols=103  Identities=15%  Similarity=0.063  Sum_probs=75.5

Q ss_pred             CccccccCCcCcceeeeccCCCCCCCccccccceEEEEEecCCCCCCCCCCEEEecccCCCCCChhhcCCCCCCCccccc
Q 019414            1 MLSQKHNSFNPRNFVFGFQGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI   80 (341)
Q Consensus         1 ~~~~~~~~~n~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~   80 (341)
                      |||+.+.+++|-.+.+...   .+...++..+.+|+|++  ++.++|++||+|+.+                        
T Consensus        38 Lvk~~~~svDp~~R~~~~~---~~~g~~~~g~~vg~Vv~--S~~~~f~~GD~V~g~------------------------   88 (147)
T d1v3va1          38 LLEALFLSVDPYMRIASKR---LKEGAVMMGQQVARVVE--SKNSAFPAGSIVLAQ------------------------   88 (147)
T ss_dssp             EEEEEEEECCTHHHHHGGG---SCTTSBCCCCEEEEEEE--ESCTTSCTTCEEEEC------------------------
T ss_pred             EEEEEEEeEcccccccccc---cccCCccccceEEEEEE--eCCCcccCCCEEEEc------------------------
Confidence            6899999999876554321   22234566789999998  678899999999966                        


Q ss_pred             cCcccccccCCCcccccCCCccccccCCCcccceEEeecCceEECCCCCCch-----hhhhccccchhh-hhhhhhhcCC
Q 019414           81 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLD-----KVCILSCGVSTG-LGATLNVAKP  154 (341)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ae~~~v~~~~~~~lp~~~~~~-----~aa~l~~~~~ta-~~~l~~~~~~  154 (341)
                                                  ++|+||.+++++.+.++|+..+..     ..+++.....|| |..++.  ..
T Consensus        89 ----------------------------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~~--~~  138 (147)
T d1v3va1          89 ----------------------------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEMLN--GA  138 (147)
T ss_dssp             ----------------------------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHHT--TC
T ss_pred             ----------------------------cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhhC--CC
Confidence                                        589999999999999998765432     344566666664 445543  45


Q ss_pred             CCCCEEEE
Q 019414          155 ERGSSVAV  162 (341)
Q Consensus       155 ~~g~~vlI  162 (341)
                      +.|++||+
T Consensus       139 k~Getvv~  146 (147)
T d1v3va1         139 NLGKAVVT  146 (147)
T ss_dssp             CSSEEEEE
T ss_pred             CCCCEEEe
Confidence            67999986

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.90  E-value=1.7e-05  Score=61.27  Aligned_cols=98  Identities=22%  Similarity=0.148  Sum_probs=70.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +..+|+|+|+|..|+.+++.|+.+|+ .|.+.+.+.++++.+++.....+.-....+..+.+.+.     ..|+||-++=
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-----~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA-----EADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH-----TCSEEEECCC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhc-----cCcEEEEeee
Confidence            45789999999999999999999999 99999999999999888654322111111111333332     3899998753


Q ss_pred             C-----hH-HHHHHHHHhcCCCcEEEEEccC
Q 019414          236 N-----ID-NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       236 ~-----~~-~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      -     |. .-+..++.++++ +.++++...
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~G-SVIVDvaid  134 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTG-SVIVDVAVD  134 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTT-CEEEETTCT
T ss_pred             cCCcccCeeecHHHHhhcCCC-cEEEEeecC
Confidence            2     11 235678899997 999999754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.88  E-value=8.1e-05  Score=58.20  Aligned_cols=102  Identities=19%  Similarity=0.187  Sum_probs=72.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCC-CCC-C----------------hhHHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT-SEH-D----------------RPIQE  217 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~-~~~-~----------------~~~~~  217 (341)
                      +..+|+|+|+|.+|+.|+..|+.+|+ .|.+.+.+.++++.+++++...+.-. ... +                ....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            45689999999999999999999999 99999999999999999988654211 000 0                00122


Q ss_pred             HHHHHhcCCccEEEeccCC-----hH-HHHHHHHHhcCCCcEEEEEccC
Q 019414          218 VIAEMTNGGVDRSVECTGN-----ID-NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       218 ~i~~~~~~~~d~vld~~g~-----~~-~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      .+.+... ..|+||-++=-     |. .-+..++.++|+ +.++++...
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaid  153 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVE  153 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGG
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeec
Confidence            2322222 48999976431     11 245778899997 999999753

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.59  E-value=0.00066  Score=52.16  Aligned_cols=100  Identities=20%  Similarity=0.242  Sum_probs=67.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHHcCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~-~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      +...--.+.+|||+|+|.+|.+.++.+...|++.++++.++.+|. ++++++|.. ++.+++    +.+.+.     .+|
T Consensus        17 ~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~----~~~~l~-----~~D   86 (159)
T d1gpja2          17 RELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDE----LVDHLA-----RSD   86 (159)
T ss_dssp             HHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGG----HHHHHH-----TCS
T ss_pred             HHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchh----HHHHhc-----cCC
Confidence            333334678999999999999999999999998899999987775 467778864 333322    444443     499


Q ss_pred             EEEeccCChH------HHHHHHHHhcCCCc--EEEEEccC
Q 019414          229 RSVECTGNID------NMISAFECVHDGWG--VAVLVGVP  260 (341)
Q Consensus       229 ~vld~~g~~~------~~~~~~~~l~~~~g--~~v~~g~~  260 (341)
                      +||.|++++.      .++..++.-..+ .  .++.++.+
T Consensus        87 ivi~atss~~~ii~~~~i~~~~~~r~~~-~~~~iiDlavP  125 (159)
T d1gpja2          87 VVVSATAAPHPVIHVDDVREALRKRDRR-SPILIIDIANP  125 (159)
T ss_dssp             EEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEEEECCSS
T ss_pred             EEEEecCCCCccccHhhhHHHHHhcccC-CCeEEEeecCC
Confidence            9999998643      344444333332 3  45666543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.54  E-value=0.00021  Score=55.54  Aligned_cols=73  Identities=16%  Similarity=0.165  Sum_probs=55.4

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceecCCCCCChhHHHHHHHHhcCCc
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      ++...+.++.+|||+|+|+.+.+++.-++..|++++..+.|+.++.+.+. .++...+-....              ..+
T Consensus         9 l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~~--------------~~~   74 (167)
T d1npya1           9 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLEN--------------QQA   74 (167)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCTT--------------CCC
T ss_pred             HHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcccc--------------cch
Confidence            45566678889999999999999999999999888999999998877654 455543321111              258


Q ss_pred             cEEEeccC
Q 019414          228 DRSVECTG  235 (341)
Q Consensus       228 d~vld~~g  235 (341)
                      |++++|+.
T Consensus        75 DliINaTp   82 (167)
T d1npya1          75 DILVNVTS   82 (167)
T ss_dssp             SEEEECSS
T ss_pred             hhheeccc
Confidence            99999875

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.53  E-value=1.1e-05  Score=66.01  Aligned_cols=103  Identities=21%  Similarity=0.245  Sum_probs=71.2

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      +.+..++++|++||-+|+|. |..++.+|+..|. ..|++++.+++..+.+++    .+.+.+.-.. .+  ..+..  .
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~-~d--~~~~~--~  140 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC-GD--GYYGV--P  140 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE-SC--GGGCC--G
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhccccccccc-Cc--hHHcc--c
Confidence            45778999999999999875 8888899998763 389999999988777654    3443322111 11  00000  1


Q ss_pred             hcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          223 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       223 ~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ..+.||+|+...+-....+.+++.|+|+ |+++..
T Consensus       141 ~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p  174 (213)
T d1dl5a1         141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (213)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             cccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence            1236999997765545567788999998 999873

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.53  E-value=1.9e-05  Score=64.31  Aligned_cols=101  Identities=18%  Similarity=0.194  Sum_probs=71.0

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCceecCCCCCChhHHHHHHHHh
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.+.+++++|++||.+|+|. |..++.+|+..|. .|++++.+++-.+.    ++++|.+.+......   ..   ....
T Consensus        70 ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd---~~---~g~~  141 (215)
T d1jg1a_          70 MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGD---GS---KGFP  141 (215)
T ss_dssp             HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC---GG---GCCG
T ss_pred             HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECc---cc---cCCc
Confidence            45778999999999999864 7778888888785 89999998765444    455776654322111   10   0111


Q ss_pred             -cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          224 -NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       224 -~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                       .++||.|+-..+.....+..++.|+++ |+++..
T Consensus       142 ~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         142 PKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             ccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence             237999987766656667889999998 998874

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.52  E-value=8.3e-05  Score=61.85  Aligned_cols=102  Identities=16%  Similarity=0.217  Sum_probs=69.4

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cC-CceecCCCCCChhHHHHHHHH
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG-VTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g-~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      ...++++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    ++ ...+- ....+  +.+.   .
T Consensus        78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~-~~~~D--i~~~---~  150 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVR-TSRSD--IADF---I  150 (250)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEE-EECSC--TTTC---C
T ss_pred             HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceE-EEEee--eecc---c
Confidence            4568999999999998865 7778888887753 499999999998887765    22 22221 11111  1110   1


Q ss_pred             hcCCccEEE-eccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          223 TNGGVDRSV-ECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       223 ~~~~~d~vl-d~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .++.||.|+ |.....+.++.+.+.|+|+ |+++.+.
T Consensus       151 ~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~  186 (250)
T d1yb2a1         151 SDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  186 (250)
T ss_dssp             CSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             ccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence            223799887 5544456789999999998 9998874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.39  E-value=0.00034  Score=58.12  Aligned_cols=79  Identities=25%  Similarity=0.236  Sum_probs=58.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhc--CCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~--~~~d~vl  231 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+ +|-.+.+ +..+.+.+...  +++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLEDER-ERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTCHH-HHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhcCCCCeEE
Confidence            5789999986 9999999999999999 89999999999988888877543 3443322 12222322222  4799999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      ++.|.
T Consensus        82 nnAG~   86 (248)
T d2d1ya1          82 NNAAI   86 (248)
T ss_dssp             ECCCC
T ss_pred             EeCcC
Confidence            98773

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.31  E-value=0.00035  Score=58.56  Aligned_cols=103  Identities=19%  Similarity=0.267  Sum_probs=72.5

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      +...++++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    +|....+.....+  .    ...
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d--~----~~~  167 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD--I----SEG  167 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC--G----GGC
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc--c----ccc
Confidence            46778999999999999865 7788888998763 399999999998877654    5543222111111  1    111


Q ss_pred             hcC-CccEEEeccCC-hHHHHHHHHHhcCCCcEEEEEc
Q 019414          223 TNG-GVDRSVECTGN-IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       223 ~~~-~~d~vld~~g~-~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .+. .+|.|+.-... .+.++.+.+.|+|+ |+++.+.
T Consensus       168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~  204 (266)
T d1o54a_         168 FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  204 (266)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence            223 68887754444 45789999999998 9998764

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.25  E-value=0.00014  Score=59.45  Aligned_cols=101  Identities=21%  Similarity=0.249  Sum_probs=68.2

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--ceecCCCCCChhHHHHHHHHhcC
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      +.+...+++|++||-+|+| .|..++.+|+.. . +|++++.+++..+.+++.-.  ..+. ....+  .....  ...+
T Consensus        62 ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~-~~~~d--~~~g~--~~~~  133 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTG-IGYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIK-LILGD--GTLGY--EEEK  133 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEE-EEESC--GGGCC--GGGC
T ss_pred             HHHHhhhcccceEEEecCC-CCHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccc-cccCc--hhhcc--hhhh
Confidence            4577899999999999986 367777788764 3 89999999998888876422  1110 00011  00000  0124


Q ss_pred             CccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          226 GVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       226 ~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      +||.|+-+.+.+...+..++.|+++ |+++..
T Consensus       134 pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         134 PYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             CEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            7999986655556667788999998 998875

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.17  E-value=0.00098  Score=54.96  Aligned_cols=79  Identities=20%  Similarity=0.249  Sum_probs=55.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce-ecCCCCCCh--hHHHHHHHHhcCCccEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHDR--PIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-vv~~~~~~~--~~~~~i~~~~~~~~d~v  230 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. ++++.. ..|..+.+.  .+.+.+.+.. +++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL-GRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH-SSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhc-CCceEE
Confidence            4788999987 8999999999999999 8999999998877654 456543 234443321  1223333332 369999


Q ss_pred             EeccCC
Q 019414          231 VECTGN  236 (341)
Q Consensus       231 ld~~g~  236 (341)
                      +++.|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.0017  Score=53.49  Aligned_cols=77  Identities=21%  Similarity=0.318  Sum_probs=54.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...  .+|..+.+  ..+++.+.. +++|+++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~--~v~~~~~~~-g~iDilV   81 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDWE--ATERALGSV-GPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH--HHHHHHTTC-CCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHH--HHHHHHHHh-CCceEEE
Confidence            5789999987 9999999999999999 899999999887754 4444322  34444322  333333222 3799999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      ++.|.
T Consensus        82 nnAg~   86 (244)
T d1pr9a_          82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            98774

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.01  E-value=0.00047  Score=54.77  Aligned_cols=75  Identities=20%  Similarity=0.224  Sum_probs=53.0

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCc-eecCCCCCChhHHHHHHHHhcCCc
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVT-DFVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~-~vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      -+|.++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+ +    ... ...|..+     .+.+.+.. +++
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~~i   93 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEAV-KGA   93 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHHT-TTC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc-----HHHHHHHh-cCc
Confidence            47899999986 9999999999999999 89999999988765433 2    211 2233332     12333333 469


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |++|++.|.
T Consensus        94 Dilin~Ag~  102 (191)
T d1luaa1          94 HFVFTAGAI  102 (191)
T ss_dssp             SEEEECCCT
T ss_pred             CeeeecCcc
Confidence            999999763

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.99  E-value=0.0025  Score=52.96  Aligned_cols=80  Identities=21%  Similarity=0.334  Sum_probs=57.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.    +++.+...   ..|..+.+.  .+.+.+.+..++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6889999986 9999999999999999 89999999877554    34455533   234433321  233444555555


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      .+|+++++.|.
T Consensus        84 ~idilinnag~   94 (258)
T d1ae1a_          84 KLNILVNNAGV   94 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CcEEEeccccc
Confidence            79999998874

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.00031  Score=58.08  Aligned_cols=104  Identities=22%  Similarity=0.235  Sum_probs=69.9

Q ss_pred             hhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH
Q 019414          147 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       147 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      .+....+++||++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++    .|...-+.....+  +.+   ..
T Consensus        24 ~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d--~~~---~~   96 (245)
T d1nkva_          24 TLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--AAG---YV   96 (245)
T ss_dssp             HHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--CTT---CC
T ss_pred             HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH--Hhh---cc
Confidence            356778999999999998753 4566778888898 99999999988776655    4543211111111  110   01


Q ss_pred             hcCCccEEEec-----c-CChHHHHHHHHHhcCCCcEEEEEc
Q 019414          223 TNGGVDRSVEC-----T-GNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       223 ~~~~~d~vld~-----~-g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .++.||.|+-.     . .-...++.+.+.|+|+ |+++...
T Consensus        97 ~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~~  137 (245)
T d1nkva_          97 ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  137 (245)
T ss_dssp             CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             ccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEEe
Confidence            23479988742     1 1245788899999998 9998764

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.98  E-value=0.0021  Score=54.32  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=71.1

Q ss_pred             hhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHHH
Q 019414          147 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       147 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      .+.+++++++|++||=+|+|- |..+..+|+..|+ +|++++.+++..+.++    +.|....+.....+  .     ..
T Consensus        52 ~~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d--~-----~~  122 (291)
T d1kpia_          52 LALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG--W-----EE  122 (291)
T ss_dssp             HHHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECC--G-----GG
T ss_pred             HHHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhhhc--c-----cc
Confidence            356888999999999999763 4457788999999 9999999999866544    45654322221122  1     12


Q ss_pred             hcCCccEEEe-----ccCC----------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 TNGGVDRSVE-----CTGN----------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~~~~~d~vld-----~~g~----------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .++.||.|+.     .++.          +..++.+.+.|+|+ |++++-..
T Consensus       123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i  173 (291)
T d1kpia_         123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  173 (291)
T ss_dssp             CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred             cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence            2357998864     2322          24678899999998 99987654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.97  E-value=0.0063  Score=50.22  Aligned_cols=103  Identities=16%  Similarity=0.169  Sum_probs=67.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCcee---cCCCCCC--hhHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~v---v~~~~~~--~~~~~~i~~~~~~~~d  228 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+. .++++....   .|..+.+  ..+.+.+.+.. +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iD   82 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence            5778899986 8999999999999999 89999999888665 455665432   2322221  01222232222 4799


Q ss_pred             EEEeccCCh-------------------------HHHHHHHHHhcCCCcEEEEEccC
Q 019414          229 RSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       229 ~vld~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +++++.|..                         ...+.++..+...+|+++.++..
T Consensus        83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            999988741                         12334555565544999988754

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.97  E-value=0.0018  Score=53.26  Aligned_cols=77  Identities=21%  Similarity=0.266  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...  .+|..+.+  ..+++.+.. +++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~--~v~~~~~~~-g~iDilV   79 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWD--ATEKALGGI-GPVDLLV   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH--HHHHHHTTC-CCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHH--HHHHHHHHc-CCCeEEE
Confidence            4788999987 8999999999999999 899999998887654 4443322  23443322  223332222 4799999


Q ss_pred             eccCC
Q 019414          232 ECTGN  236 (341)
Q Consensus       232 d~~g~  236 (341)
                      ++.|.
T Consensus        80 nnAg~   84 (242)
T d1cyda_          80 NNAAL   84 (242)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            98773

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.00075  Score=55.00  Aligned_cols=98  Identities=18%  Similarity=0.205  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCcee----cCCCCCChhHHHHHHHHh
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDF----VNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~v----v~~~~~~~~~~~~i~~~~  223 (341)
                      .++||++||-+|+|. |..++.+|+..|. .+|++++.+++-.+.+++    .+....    +.....|  ..   ....
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD--~~---~~~~  146 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD--GR---MGYA  146 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC--GG---GCCG
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee--cc---cccc
Confidence            789999999999864 7888888887763 499999999988776543    232210    0000011  00   0011


Q ss_pred             -cCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          224 -NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       224 -~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                       .+.||.|+-+.......+..++.|+|+ |+++..
T Consensus       147 ~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         147 EEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence             237999987665556667889999998 999874

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.95  E-value=0.0015  Score=54.29  Aligned_cols=104  Identities=19%  Similarity=0.293  Sum_probs=71.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cC---CceecCCCCCChhHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG---VTDFVNTSEHDRPIQEVI  219 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g---~~~vv~~~~~~~~~~~~i  219 (341)
                      +...++++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    ++   .+.+... ..+  ..+  
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~-~~d--~~~--  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV-VSD--LAD--  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE-CSC--GGG--
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEE-ecc--ccc--
Confidence            46778999999999998764 8888899998864 499999999999888765    21   1221100 111  110  


Q ss_pred             HHHhcCCccEEE-eccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          220 AEMTNGGVDRSV-ECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       220 ~~~~~~~~d~vl-d~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ....++.||.|| |.....+.++.+.+.|+|+ |+++.+-
T Consensus       162 ~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         162 SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence            011223799876 5443446789999999998 9998874

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.95  E-value=0.0022  Score=54.12  Aligned_cols=103  Identities=16%  Similarity=0.127  Sum_probs=70.4

Q ss_pred             hhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH
Q 019414          147 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       147 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~  222 (341)
                      .+.++++++||++||=+|+|- |..++.+|+..|+ +|++++.+++..+.+++    .|...-+.....+  +    ++ 
T Consensus        53 ~~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d--~----~~-  123 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W----EQ-  123 (285)
T ss_dssp             HHHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G----GG-
T ss_pred             HHHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhh--h----hc-
Confidence            356788999999999999864 6778889999999 99999999998887765    3322111111111  1    11 


Q ss_pred             hcCCccEEEe-----ccCC---hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          223 TNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       223 ~~~~~d~vld-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .++.+|.|+-     .++.   ...+..+.+.|+|+ |++++...
T Consensus       124 ~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~i  167 (285)
T d1kpga_         124 FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  167 (285)
T ss_dssp             CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEEE
Confidence            1346888763     3332   24577889999998 99886543

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.0014  Score=54.05  Aligned_cols=77  Identities=18%  Similarity=0.278  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.....  +.|..  ..+..+...+.. +++|.+++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~--~~~~~~~~~~~~-~~id~lVn   80 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVT--KKKQIDQFANEV-ERLDVLFN   80 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTT--CHHHHHHHHHHC-SCCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecc--cccccccccccc-ccceeEEe
Confidence            4778999987 9999999999999999 9999999998877665533322  33332  222444444332 37999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus        81 ~ag~   84 (245)
T d2ag5a1          81 VAGF   84 (245)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            8774

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.88  E-value=0.0018  Score=54.60  Aligned_cols=104  Identities=15%  Similarity=0.168  Sum_probs=69.9

Q ss_pred             hhhhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHH
Q 019414          145 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIA  220 (341)
Q Consensus       145 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~  220 (341)
                      +..+.+..+++||++||=+|+|. |..+..+++..|+ .|++++.+++..+.+++    .|....+.....+  .    +
T Consensus        41 ~~~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d--~----~  112 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W----E  112 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G----G
T ss_pred             HHHHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhhhh--h----h
Confidence            33456788999999999999763 3356678888898 99999999999877665    3432211111111  1    1


Q ss_pred             HHhcCCccEEEe-----ccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          221 EMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       221 ~~~~~~~d~vld-----~~g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                       ..++.||.|+-     .++.   +..+..+.++|+|+ |++++-.
T Consensus       113 -~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~  156 (280)
T d2fk8a1         113 -DFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQS  156 (280)
T ss_dssp             -GCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             -hhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEE
Confidence             12347888863     3332   24578889999998 9998754

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.86  E-value=0.0022  Score=53.12  Aligned_cols=96  Identities=24%  Similarity=0.293  Sum_probs=63.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      ..++|++||=+|+|. |..++.+++ .|. +|++++.+++..+.+++    .|....+.  ..+  ..+   ....+.||
T Consensus       117 ~~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~--~~d--~~~---~~~~~~fD  186 (254)
T d2nxca1         117 HLRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFL--EGS--LEA---ALPFGPFD  186 (254)
T ss_dssp             HCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEE--ESC--HHH---HGGGCCEE
T ss_pred             hcCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEE--ecc--ccc---cccccccc
Confidence            367999999998763 566665554 687 89999999999887764    34432111  112  221   22335899


Q ss_pred             EEEeccCCh---HHHHHHHHHhcCCCcEEEEEcc
Q 019414          229 RSVECTGNI---DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       229 ~vld~~g~~---~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +|+-.....   +.++.+.+.|+|+ |++++.|.
T Consensus       187 ~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgi  219 (254)
T d2nxca1         187 LLVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             hhhhccccccHHHHHHHHHHhcCCC-cEEEEEec
Confidence            998544321   3456788899998 99988664

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.84  E-value=0.004  Score=48.11  Aligned_cols=71  Identities=17%  Similarity=0.198  Sum_probs=50.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCC---ceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV---TDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~---~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      ..+|.+|||+|+|+.+.+++.-+...|. +++.+.|+.+|.+.+.+ +..   ...+...+           .....+|+
T Consensus        15 ~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-----------~~~~~~dl   82 (170)
T d1nyta1          15 IRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE-----------LEGHEFDL   82 (170)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-----------GTTCCCSE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc-----------ccccccce
Confidence            4578999999999999999988888998 78899999888765543 322   11221111           11236899


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      +++|+..
T Consensus        83 iIN~Tp~   89 (170)
T d1nyta1          83 IINATSS   89 (170)
T ss_dssp             EEECCSC
T ss_pred             eeccccc
Confidence            9999854

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.84  E-value=0.00044  Score=59.58  Aligned_cols=106  Identities=17%  Similarity=0.224  Sum_probs=68.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cC-----------CceecCCCCC
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG-----------VTDFVNTSEH  211 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g-----------~~~vv~~~~~  211 (341)
                      +...++++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++    ++           .+.+- ....
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~-~~~~  167 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVD-FIHK  167 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEE-EEES
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhcccccee-EEec
Confidence            45678999999999998865 8889999998874 399999999998887664    11           11110 0000


Q ss_pred             ChhHHHHHHHHhcCCccEEE-eccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          212 DRPIQEVIAEMTNGGVDRSV-ECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       212 ~~~~~~~i~~~~~~~~d~vl-d~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +  +.........+.||.|| |-......++.+.+.|+|+ |+++.+-
T Consensus       168 d--i~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         168 D--ISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             C--TTCCC-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             c--hhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence            0  00000111223588876 5433335789999999998 9998874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0035  Score=51.78  Aligned_cols=78  Identities=19%  Similarity=0.286  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CCce--ecCCCCCChhHHHHHHHHhc--CCccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD--FVNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~~--vv~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+. +...  ..|..+.+ +..+.+.+...  +++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~-~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQED-DVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHH-HHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHH-HHHHHHHHHHHhcCCCCE
Confidence            5788999987 9999999999999999 899999999988776553 3222  23433322 12222222222  47999


Q ss_pred             EEeccC
Q 019414          230 SVECTG  235 (341)
Q Consensus       230 vld~~g  235 (341)
                      ++++.|
T Consensus        83 lVnnAG   88 (250)
T d1ydea1          83 VVNNAG   88 (250)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999887

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.80  E-value=0.004  Score=47.71  Aligned_cols=85  Identities=20%  Similarity=0.288  Sum_probs=58.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC-ceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|.|+|.|.+|...+..++..|+ .|++.++++++.+.+++.|. +...+..+       .+     ...|+||-|+.. 
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~~-------~~-----~~~DiIilavp~-   67 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDLS-------LL-----QTAKIIFLCTPI-   67 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCGG-------GG-----TTCSEEEECSCH-
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeecc-------cc-----cccccccccCcH-
Confidence            58899999999998888888998 99999999999999998885 33322111       01     257899988854 


Q ss_pred             HHHHHHH----HHhcCCCcEEEEEc
Q 019414          238 DNMISAF----ECVHDGWGVAVLVG  258 (341)
Q Consensus       238 ~~~~~~~----~~l~~~~g~~v~~g  258 (341)
                      ..++..+    ..+.++ ..++.++
T Consensus        68 ~~~~~vl~~l~~~l~~~-~iv~~~~   91 (165)
T d2f1ka2          68 QLILPTLEKLIPHLSPT-AIVTDVA   91 (165)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEECC
T ss_pred             hhhhhhhhhhhhhcccc-cceeecc
Confidence            3333333    334444 4554454

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.77  E-value=0.0046  Score=51.27  Aligned_cols=80  Identities=19%  Similarity=0.295  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+.+.  .+.+.+.+..++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            5788999987 8999999999999999 899999998886543    3344432   234433221  122333333344


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d2ae2a_          86 KLNILVNNAGI   96 (259)
T ss_dssp             CCCEEEECCCC
T ss_pred             CceEEEECCce
Confidence            79999998874

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.76  E-value=0.022  Score=41.56  Aligned_cols=75  Identities=16%  Similarity=0.213  Sum_probs=54.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|+|.|.|.+|...++.+...|. .|++++.++++.+.+++ ++...+. -+..+   .+.+++..-+.+|.++-++.+.
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~vi~-Gd~~~---~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDCTK---IKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCTTS---HHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhhhcc-Ccccc---hhhhhhcChhhhhhhcccCCcH
Confidence            58899999999999999999998 99999999999887765 5654433 22222   2233333334789999888774


Q ss_pred             H
Q 019414          238 D  238 (341)
Q Consensus       238 ~  238 (341)
                      +
T Consensus        77 ~   77 (132)
T d1lssa_          77 E   77 (132)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.71  E-value=0.013  Score=41.76  Aligned_cols=92  Identities=15%  Similarity=-0.063  Sum_probs=61.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHHcCCceec-CCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~--~~~~~~~~~g~~~vv-~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      .|.+|||+|+|.+|..-++.+...|+ .|++++...  +-..++++-.....- .+.+.+           -.++++|+-
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~d-----------l~~~~lv~~   78 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLTLVEGPFDETL-----------LDSCWLAIA   78 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCEEEESSCCGGG-----------GTTCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCceeeccCCCHHH-----------hCCCcEEee
Confidence            36799999999999999999999999 666665433  223333332222221 111111           126899999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +.+..+.-.+..+..++. |..+...+.
T Consensus        79 at~d~~~n~~i~~~a~~~-~ilVNv~D~  105 (113)
T d1pjqa1          79 ATDDDTVNQRVSDAAESR-RIFCNVVDA  105 (113)
T ss_dssp             CCSCHHHHHHHHHHHHHT-TCEEEETTC
T ss_pred             cCCCHHHHHHHHHHHHHc-CCEEEeCCC
Confidence            998866666777888886 888887653

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.71  E-value=0.0021  Score=53.35  Aligned_cols=79  Identities=23%  Similarity=0.323  Sum_probs=55.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+. ++++|...   ..|..+.+ .+.+.+.+...  +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~-~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQA-SIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHH-HHHHHHHHHHHHhCCcc
Confidence            4778899987 9999999999999999 89999999888664 55676543   23444332 12222333222  4799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99998874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.67  E-value=0.0037  Score=48.96  Aligned_cols=98  Identities=10%  Similarity=-0.035  Sum_probs=66.1

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce------------------e--cCC
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD------------------F--VNT  208 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~------------------v--v~~  208 (341)
                      +....+.||.+||.+|+|. |..+..+|+ .|+ .|++++.+++..+.+++.....                  .  -+.
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~-~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHH-cCC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            4456889999999999864 678888887 498 9999999999999988742110                  0  011


Q ss_pred             CCCChhHHHHHHHHhcCCccEEEeccCC--------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          209 SEHDRPIQEVIAEMTNGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       209 ~~~~~~~~~~i~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .+..    .    .....+|.|++...-        ...++.+.+.|+|+ |++++..
T Consensus        90 ~~l~----~----~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          90 FALT----A----RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             SSST----H----HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             cccc----c----ccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence            1110    0    011258888874331        24577888999998 9876654

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.66  E-value=0.0045  Score=51.37  Aligned_cols=80  Identities=23%  Similarity=0.250  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCC--hhHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHD--RPIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~--~~~~~~i~~~~~~  225 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+...   ..|..+.+  ..+.+.+.+..++
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            5788999987 9999999999999999 8999999988866432    233321   23443322  1133334444445


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      .+|+++++.|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d1xq1a_          86 KLDILINNLGA   96 (259)
T ss_dssp             CCSEEEEECCC
T ss_pred             Ccccccccccc
Confidence            79999998874

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.65  E-value=0.0028  Score=52.54  Aligned_cols=79  Identities=25%  Similarity=0.314  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCCh--hHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDR--PIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~~~d  228 (341)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+. +++++...   ..|..+.+.  .+.+.+.+.. +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHc-CCcc
Confidence            5788999987 8999999999999999 89999999888665 45565432   234333221  1223333322 3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99998874

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.65  E-value=0.0098  Score=46.04  Aligned_cols=92  Identities=20%  Similarity=0.225  Sum_probs=60.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCC--------ChhHHHHHHHHhcCCccE
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH--------DRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~--------~~~~~~~i~~~~~~~~d~  229 (341)
                      .+|.|+|+|.+|++.+..+...|+ .|...++++++.+.+++.+..........        ..+..+.+     ...|+
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD~   75 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDADV   75 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCSE
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCCE
Confidence            578999999999999999999999 99999999999998887654221110000        00133322     24899


Q ss_pred             EEeccCChH---HHHHHHHHhcCCCcEEEE
Q 019414          230 SVECTGNID---NMISAFECVHDGWGVAVL  256 (341)
Q Consensus       230 vld~~g~~~---~~~~~~~~l~~~~g~~v~  256 (341)
                      +|-++....   .+++....+.++ ..++.
T Consensus        76 iii~v~~~~~~~~~~~i~~~l~~~-~~iv~  104 (184)
T d1bg6a2          76 ILIVVPAIHHASIAANIASYISEG-QLIIL  104 (184)
T ss_dssp             EEECSCGGGHHHHHHHHGGGCCTT-CEEEE
T ss_pred             EEEEEchhHHHHHHHHhhhccCCC-CEEEE
Confidence            999987642   333344455554 44443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.65  E-value=0.0067  Score=46.69  Aligned_cols=96  Identities=10%  Similarity=0.024  Sum_probs=61.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +.+|+|+|+|.+|..+++.+...|+ .|++++++.++.+.+.+ ++...+.......  .. ..... -...|.++.+..
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~--~~-~~~~~-i~~~~~~i~~~~   76 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND--DA-ALDAE-VAKHDLVISLIP   76 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTC--HH-HHHHH-HTTSSEEEECSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccccc--hh-hhHhh-hhccceeEeecc
Confidence            5789999999999999998888899 89999999999887665 3332222111111  11 11111 124788888776


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          236 NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ..........+...+ -.++...
T Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~~   98 (182)
T d1e5qa1          77 YTFHATVIKSAIRQK-KHVVTTS   98 (182)
T ss_dssp             GGGHHHHHHHHHHHT-CEEECSS
T ss_pred             chhhhHHHHHHHhhc-cceeecc
Confidence            655555555555554 5555443

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.62  E-value=0.0022  Score=52.96  Aligned_cols=79  Identities=18%  Similarity=0.228  Sum_probs=54.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHHcCCce----ecCCCCCC--hhHHHHHHHHhcC-Ccc
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTD----FVNTSEHD--RPIQEVIAEMTNG-GVD  228 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~-~vv~v~~~~~~~~~~~~~g~~~----vv~~~~~~--~~~~~~i~~~~~~-~~d  228 (341)
                      .+|||+|+ +++|++.++.+...|+. .|+.+.+++++.+.+++.....    .+|..+.+  ..+.+.+.+..+. ++|
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~id   83 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLS   83 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            68999987 99999988877777863 7888889999888777654322    23433321  1244445444444 699


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        84 ilinnAG~   91 (250)
T d1yo6a1          84 LLINNAGV   91 (250)
T ss_dssp             EEEECCCC
T ss_pred             EEEEcCcc
Confidence            99998873

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.58  E-value=0.0023  Score=52.64  Aligned_cols=79  Identities=27%  Similarity=0.391  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc---eecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT---DFVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~---~vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++..   ...|..+.+ .+.+.+.+...  +++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDPA-SIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHH-HHHHHHHHHHHHTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHH-HhhhhhhhhhcccCCcc
Confidence            4778899987 8999999999999999 899999999887654 445543   234444322 12222333222  3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        81 ilVnnAg~   88 (243)
T d1q7ba_          81 ILVNNAGI   88 (243)
T ss_dssp             EEEECCCC
T ss_pred             eehhhhhh
Confidence            99998774

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.57  E-value=0.0044  Score=51.14  Aligned_cols=79  Identities=27%  Similarity=0.413  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-----HHHcCCce---ecCCCCCCh--hHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-----AKKFGVTD---FVNTSEHDR--PIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-----~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~  224 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.     .++.|...   ..|-.+.+.  .+.+.+.+.. 
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            4788999987 8999999999999999 89999999877543     23455532   234433221  1223333322 


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++++.|.
T Consensus        82 g~iDiLVnnAG~   93 (251)
T d1vl8a_          82 GKLDTVVNAAGI   93 (251)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998874

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.0016  Score=51.92  Aligned_cols=73  Identities=22%  Similarity=0.281  Sum_probs=50.6

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceec-CCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      ..+|+|+|+ |.+|...+..+...|+ +|+++.++.++.......+++.+. |..+    . +.+.+.. .+.|+||.++
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~gD~~d----~-~~l~~al-~~~d~vi~~~   75 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVLQ----A-ADVDKTV-AGQDAVIVLL   75 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTTS----H-HHHHHHH-TTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccccccccccc----h-hhHHHHh-cCCCEEEEEe
Confidence            367999997 9999999998888898 899999998886544444443332 3322    2 2233332 2589999998


Q ss_pred             CC
Q 019414          235 GN  236 (341)
Q Consensus       235 g~  236 (341)
                      |.
T Consensus        76 g~   77 (205)
T d1hdoa_          76 GT   77 (205)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.55  E-value=0.0046  Score=51.28  Aligned_cols=78  Identities=23%  Similarity=0.323  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      .|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.    +.|...   ..|..+.+.  .+.+.+.+.. +
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            5788999987 8999999999999999 8999999998866443    345432   234433221  1233333322 4


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ++|+++++.|
T Consensus        82 ~iDilVnnaG   91 (260)
T d1zema1          82 KIDFLFNNAG   91 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCeehhhhc
Confidence            7999999877

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.54  E-value=0.0089  Score=48.62  Aligned_cols=72  Identities=22%  Similarity=0.276  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.   ++.+... ..|..+.   + +.+.+.. +++|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv~~~---~-~~~~~~~-g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDLRKD---L-DLLFEKV-KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCTTTC---H-HHHHHHS-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcchHHH---H-HHHHHHh-CCCcEEEec
Confidence            4778999987 9999999999999999 899999887654   4555543 2333321   3 3333333 469999998


Q ss_pred             cCC
Q 019414          234 TGN  236 (341)
Q Consensus       234 ~g~  236 (341)
                      .|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.52  E-value=0.0043  Score=51.96  Aligned_cols=78  Identities=19%  Similarity=0.328  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+. .++++...   ..|..+.+ ...+.+.+...  +++|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSLE-DQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccHH-HHHHHHHHHHHHhCCcc
Confidence            4789999987 9999999999999999 89999999988765 44455432   23433322 12222222222  3799


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      +++++.|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999876

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.52  E-value=0.00072  Score=55.55  Aligned_cols=98  Identities=17%  Similarity=0.263  Sum_probs=61.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC----hhHHHHHHHHhcC-CccE
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD----RPIQEVIAEMTNG-GVDR  229 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~----~~~~~~i~~~~~~-~~d~  229 (341)
                      +|.+|||+|+ +++|.+.++.+...|+ +|+.+++++.+..     .....+.....+    +.+...+.+.... ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4788999987 9999999999999999 8888877654321     111122111111    1133333344444 7999


Q ss_pred             EEeccCCh-----------H---------------HHHHHHHHhcCCCcEEEEEccC
Q 019414          230 SVECTGNI-----------D---------------NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       230 vld~~g~~-----------~---------------~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ++++.|..           +               ..+.++..++++ |+++.++..
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~  130 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAK  130 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccH
Confidence            99987730           1               122344555776 999988754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0058  Score=50.16  Aligned_cols=79  Identities=22%  Similarity=0.252  Sum_probs=54.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHh--cC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      .|.++||+|+ +++|.+.+.-....|+ +|+.+++++++.+.+    ++.|...   ..|..+.+ ...+.+++..  .+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~-~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNRE-DIYSSAKKVKAEIG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHHcC
Confidence            5788999987 8999999888889999 899999999886643    3455432   33444432 1233333322  23


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      .+|+++++.|.
T Consensus        84 ~idilinnag~   94 (244)
T d1yb1a_          84 DVSILVNNAGV   94 (244)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCceeEeeccc
Confidence            69999998884

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.0048  Score=51.08  Aligned_cols=79  Identities=25%  Similarity=0.374  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-e----ecCCCCCCh--hHHHHHHHHh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVT-D----FVNTSEHDR--PIQEVIAEMT  223 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~----vv~~~~~~~--~~~~~i~~~~  223 (341)
                      +|.++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+    ++.+.. .    ..|-.+.+.  .+.+.+.+..
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999987 8999999999989999 899999999886653    333421 2    234443221  1333333333


Q ss_pred             cCCccEEEeccCC
Q 019414          224 NGGVDRSVECTGN  236 (341)
Q Consensus       224 ~~~~d~vld~~g~  236 (341)
                       +++|+++++.|.
T Consensus        88 -g~iD~lVnnAg~   99 (257)
T d1xg5a_          88 -SGVDICINNAGL   99 (257)
T ss_dssp             -CCCSEEEECCCC
T ss_pred             -CCCCEEEecccc
Confidence             479999998874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.46  E-value=0.0085  Score=49.83  Aligned_cols=78  Identities=14%  Similarity=0.265  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc---e--ecCCCCCChhHHHHHHHHhc--CC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT---D--FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~---~--vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      .|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+ ++++..   .  ..|..+.+ ++.+.+.+...  ++
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDE-DVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHH-HHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHH-HHHHHHHHHHHHcCC
Confidence            5788999987 8999999999999999 899999999887654 344431   1  22433322 12222322222  47


Q ss_pred             ccEEEeccC
Q 019414          227 VDRSVECTG  235 (341)
Q Consensus       227 ~d~vld~~g  235 (341)
                      +|+++++.|
T Consensus        83 iD~lVnnAG   91 (268)
T d2bgka1          83 LDIMFGNVG   91 (268)
T ss_dssp             CCEEEECCC
T ss_pred             cceeccccc
Confidence            999999887

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.46  E-value=0.0072  Score=49.58  Aligned_cols=79  Identities=14%  Similarity=0.178  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---ecCCCCCCh--hHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDR--PIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~~~d  228 (341)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+ ++++...   ..|..+.+.  .+.+.+.+.. +++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GGLH   82 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHh-CCCe
Confidence            5788999987 9999999999999999 899999999887654 4454322   234333220  1223333322 3799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        83 ilinnAG~   90 (244)
T d1nffa_          83 VLVNNAGI   90 (244)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998874

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.40  E-value=0.0063  Score=47.63  Aligned_cols=101  Identities=18%  Similarity=0.261  Sum_probs=65.3

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-eecCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~i~~~  222 (341)
                      +....++++|++||=+|+|. |..++.+|+. +. +|++++.+++..+.+++    +|.. .+ .....+  ..+..   
T Consensus        25 il~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v-~~~~gd--a~~~~---   95 (186)
T d1l3ia_          25 IMCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEGD--APEAL---   95 (186)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEESC--HHHHH---
T ss_pred             HHHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcce-EEEECc--hhhcc---
Confidence            34567899999999998643 4445566654 44 99999999988777654    5653 22 111122  32222   


Q ss_pred             hc-CCccEEEeccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          223 TN-GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       223 ~~-~~~d~vld~~g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .+ ..+|.|+-..+.   .+.++.+.+.|+|+ |+++...
T Consensus        96 ~~~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          96 CKIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             TTSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cccCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence            22 379988754322   34677888999998 9988764

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.38  E-value=0.015  Score=45.18  Aligned_cols=41  Identities=22%  Similarity=0.430  Sum_probs=35.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE  196 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~  196 (341)
                      .+.+|+|+|+|+.+.+++..+...|.+.++.+.++.++.+.
T Consensus        17 ~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~   57 (182)
T d1vi2a1          17 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDK   57 (182)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHH
Confidence            67899999999999999888888999899999998776554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.38  E-value=0.00077  Score=55.30  Aligned_cols=97  Identities=24%  Similarity=0.255  Sum_probs=59.3

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC----hhHHHHHHHHhc-CCccEE
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD----RPIQEVIAEMTN-GGVDRS  230 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~----~~~~~~i~~~~~-~~~d~v  230 (341)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.+++++++..     .....+......    ....+.+..... +++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            357999987 9999999999999999 8999988765421     111111111111    112222333323 479999


Q ss_pred             EeccCCh--------------------------HHHHHHHHHhcCCCcEEEEEccC
Q 019414          231 VECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       231 ld~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +++.|..                          ...+.++..++++ |+++.++..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~  130 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  130 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence            9987730                          1123345556776 899888743

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.37  E-value=0.0011  Score=53.77  Aligned_cols=99  Identities=13%  Similarity=0.157  Sum_probs=60.9

Q ss_pred             CCCCCCEEEEECC--CHHHHHHHHHHHHcCC---CEEEEEcCChhhHHHHHHc---------CCceecCCCCCChhHHHH
Q 019414          153 KPERGSSVAVFGL--GAVGLAAAEGARIAGA---SRIIGVDRSSKRFEEAKKF---------GVTDFVNTSEHDRPIQEV  218 (341)
Q Consensus       153 ~~~~g~~vlI~G~--g~~G~~a~~la~~~g~---~~vv~v~~~~~~~~~~~~~---------g~~~vv~~~~~~~~~~~~  218 (341)
                      .++||++||.+|+  |-....+.+++...|.   .+|++++.+++-.+.+++.         +...+.... .+  ..+.
T Consensus        77 ~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~-~d--~~~~  153 (223)
T d1r18a_          77 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE-GD--GRKG  153 (223)
T ss_dssp             TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE-SC--GGGC
T ss_pred             ccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe-cc--cccc
Confidence            7899999999986  4444444555555553   2899999998766655431         222221110 11  0000


Q ss_pred             HHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEE
Q 019414          219 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       219 i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      .  ...++||.|+-+.+-++..+..++.|+++ |+++..
T Consensus       154 ~--~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~p  189 (223)
T d1r18a_         154 Y--PPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP  189 (223)
T ss_dssp             C--GGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             c--ccccceeeEEEEeechhchHHHHHhcCCC-cEEEEE
Confidence            0  11237999987666656667888999998 999774

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=96.36  E-value=0.02  Score=43.39  Aligned_cols=95  Identities=17%  Similarity=0.204  Sum_probs=57.7

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHcCCCEEEEEc-CCh--hhHHHHHHcCCceecCCCCCChhHHHHHHHHhc-CCccEEEe
Q 019414          158 SSVAVFGLGAVGL-AAAEGARIAGASRIIGVD-RSS--KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVE  232 (341)
Q Consensus       158 ~~vlI~G~g~~G~-~a~~la~~~g~~~vv~v~-~~~--~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~-~~~d~vld  232 (341)
                      =+|.|+|+|.+|. ..+++++....-.++++. ++.  ....+.+++|......       ..+.+.+... .++|+||+
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~-------~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA-------GVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS-------HHHHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc-------ceeeeeecccccccCEEEE
Confidence            3689999999987 567788776544666664 443  3456778888754321       3344444333 26999999


Q ss_pred             ccCChHHHHHHH--HHhcCCCcEEEEEccCC
Q 019414          233 CTGNIDNMISAF--ECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       233 ~~g~~~~~~~~~--~~l~~~~g~~v~~g~~~  261 (341)
                      ++......+..+  +.+..  |.+|.-....
T Consensus        78 ATpag~h~~~~~~~~aa~~--G~~VID~s~a  106 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKP--GIRLIDLTPA  106 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCT--TCEEEECSTT
T ss_pred             cCCchhHHHhHHHHHHHHc--CCEEEEcccc
Confidence            986555555443  34554  5555444333

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.34  E-value=0.018  Score=43.78  Aligned_cols=88  Identities=18%  Similarity=0.230  Sum_probs=62.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|.|+|.|.+|...+.-+...|+ .|++.++++++.+.+++.++...- .      ..+.+++     .|++|-|+..++
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~~-~------~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETAS-T------AKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECS-S------HHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhcc-c------HHHHHhC-----CCeEEEEcCCHH
Confidence            47889999999999888888899 899999999999999988874321 1      3333322     688888887766


Q ss_pred             HHHHHH-------HHhcCCCcEEEEEccC
Q 019414          239 NMISAF-------ECVHDGWGVAVLVGVP  260 (341)
Q Consensus       239 ~~~~~~-------~~l~~~~g~~v~~g~~  260 (341)
                      ..+..+       ..+.++ ..++.++..
T Consensus        69 ~v~~v~~~~~~~~~~~~~g-~iiid~sT~   96 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPG-TVLIDMSSI   96 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECSCC
T ss_pred             HHHHHHhCCcchhhccCCC-CEEEECCCC
Confidence            555443       344554 566666543

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.34  E-value=0.0038  Score=50.85  Aligned_cols=94  Identities=18%  Similarity=0.214  Sum_probs=67.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      ...++.+||=+|+| .|..+..+++ .|+ +|++++.+++..+.+++.+....+.....+  +     ...++.||+|+-
T Consensus        39 ~~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~~~--l-----~~~~~~fD~ii~  108 (246)
T d2avna1          39 YLKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAED--L-----PFPSGAFEAVLA  108 (246)
T ss_dssp             HCCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCTTS--C-----CSCTTCEEEEEE
T ss_pred             hcCCCCEEEEECCC-Cchhcccccc-cce-EEEEeecccccccccccccccccccccccc--c-----ccccccccceee
Confidence            35577899988987 4888888876 488 899999999999999997776554433322  1     122347999885


Q ss_pred             ccC------C-hHHHHHHHHHhcCCCcEEEEE
Q 019414          233 CTG------N-IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       233 ~~g------~-~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ...      . ...+.++.++|+|+ |.++..
T Consensus       109 ~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         109 LGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             CSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            432      2 23577888999998 988764

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.33  E-value=0.0037  Score=51.74  Aligned_cols=80  Identities=9%  Similarity=0.072  Sum_probs=48.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce----ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD----FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~----vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      +|.++||+|+ +++|.+.+......|+ +|+.+.++.++.+.+.+    .+-..    ..|......++.+.+.+...  
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4788999987 8999999998889999 55555555544433322    22211    22332221123332333322  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++++.|.
T Consensus        83 g~iDilvnnAG~   94 (254)
T d1sbya1          83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEeCCCC
Confidence            379999999884

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.33  E-value=0.022  Score=42.76  Aligned_cols=83  Identities=25%  Similarity=0.291  Sum_probs=55.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|.++|+|.+|.+.++-+...|..++++.++++++.+.+++ +|+...-+..+-             ...|+||-|+- |
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~v-------------~~~Div~lavk-P   67 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPEL-------------HSDDVLILAVK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCC-------------CTTSEEEECSC-H
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccccc-------------cccceEEEecC-H
Confidence            47889999999988774433453499999999999887655 676433222211             13688888874 4


Q ss_pred             HHHHHHHHHhcCCCcEEEE
Q 019414          238 DNMISAFECVHDGWGVAVL  256 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~  256 (341)
                      ..+...++-+.+. +.++.
T Consensus        68 ~~~~~v~~~l~~~-~~~vi   85 (152)
T d1yqga2          68 QDMEAACKNIRTN-GALVL   85 (152)
T ss_dssp             HHHHHHHTTCCCT-TCEEE
T ss_pred             HHHHHhHHHHhhc-ccEEe
Confidence            5666666666665 55443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.32  E-value=0.0081  Score=44.09  Aligned_cols=73  Identities=16%  Similarity=0.288  Sum_probs=53.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceec-CCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv-~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +++|.|.|.+|...++.++..|. .|++++.++++.+.+++.+...++ |..+.+  ..   .+..-...|.++-++++.
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~--~l---~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANATEEN--EL---LSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEECCTTCTT--HH---HHHTGGGCSEEEECCCSC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceeeecccch--hh---hccCCccccEEEEEcCch
Confidence            47888999999999999999999 899999999999999888875443 332322  32   222112578888777653

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.32  E-value=0.0061  Score=49.47  Aligned_cols=98  Identities=19%  Similarity=0.187  Sum_probs=66.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCcee--c--CCCCCChhHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--V--NTSEHDRPIQEVI  219 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v--v--~~~~~~~~~~~~i  219 (341)
                      +.+.++++||++||=+|+|. |..+..+++. +. +|++++.+++..+.+++    .+.+.+  +  |..+-        
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~--------   76 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL--------   76 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC--------
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhcccccccccccccccccc--------
Confidence            56788999999999999864 6777777774 55 89999999987766543    343321  1  11110        


Q ss_pred             HHHhcCCccEEEeccC-----C-hHHHHHHHHHhcCCCcEEEEEc
Q 019414          220 AEMTNGGVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g-----~-~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                       .+.++.||+|+-.-.     . ...+..+.+.|+|+ |+++...
T Consensus        77 -~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~  119 (234)
T d1xxla_          77 -PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD  119 (234)
T ss_dssp             -CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             -cccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence             112347999885322     1 34688999999998 9888764

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.31  E-value=0.0077  Score=49.81  Aligned_cols=78  Identities=23%  Similarity=0.293  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cC--Cce---ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FG--VTD---FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g--~~~---vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.+    .+  ...   ..|..+.+ ++.+.+.+... 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~-~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEA-QVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHH-HHHHHHHHHHHH
Confidence            4678899987 8999999999999999 89999999988664322    22  221   23444332 13222332222 


Q ss_pred             -CCccEEEeccC
Q 019414          225 -GGVDRSVECTG  235 (341)
Q Consensus       225 -~~~d~vld~~g  235 (341)
                       +++|+++++.|
T Consensus        81 ~G~iDiLVnnAG   92 (258)
T d1iy8a_          81 FGRIDGFFNNAG   92 (258)
T ss_dssp             HSCCSEEEECCC
T ss_pred             hCCCCEEEECCc
Confidence             47999999876

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.30  E-value=0.008  Score=49.16  Aligned_cols=79  Identities=23%  Similarity=0.372  Sum_probs=55.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCce---ecCCCCCChhHHHHHHHHhc--CCcc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d  228 (341)
                      .|.++||+|+ +++|.+.++-+...|+ +|+.+.+++++.+. .++++.+.   ..|.++.+ ...+.+.+...  +++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~-~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPK-AVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHH-HHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCHH-HHHHHHHHHHHHhCCcc
Confidence            5788999987 8999999999999999 99999999988665 45577543   23443322 23232333322  4799


Q ss_pred             EEEeccCC
Q 019414          229 RSVECTGN  236 (341)
Q Consensus       229 ~vld~~g~  236 (341)
                      +++++.|.
T Consensus        82 iLinnAg~   89 (241)
T d2a4ka1          82 GVAHFAGV   89 (241)
T ss_dssp             EEEEGGGG
T ss_pred             Eecccccc
Confidence            99998763

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.29  E-value=0.016  Score=47.65  Aligned_cols=84  Identities=18%  Similarity=0.269  Sum_probs=53.5

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh-------HHHHHHcCCcee---cCCCCCChhHHHHHH
Q 019414          152 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FEEAKKFGVTDF---VNTSEHDRPIQEVIA  220 (341)
Q Consensus       152 ~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~-------~~~~~~~g~~~v---v~~~~~~~~~~~~i~  220 (341)
                      ..++|+.++||+|+ +++|++.+..+...|++.|+.+.+++.+       .+.+++.|....   .|..+.+ ...+.+.
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~-~~~~~~~   82 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRE-SVRELLG   82 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHH-HHHHHHH
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHH-HHHHhhc
Confidence            35789999999986 9999999888888898667777665322       223445665432   3443322 1222232


Q ss_pred             HHhcC-CccEEEeccCC
Q 019414          221 EMTNG-GVDRSVECTGN  236 (341)
Q Consensus       221 ~~~~~-~~d~vld~~g~  236 (341)
                      ..... ++|.++++.|.
T Consensus        83 ~i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          83 GIGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             TSCTTSCEEEEEECCCC
T ss_pred             ccccccccccccccccc
Confidence            23223 68999998874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.26  E-value=0.0093  Score=48.96  Aligned_cols=79  Identities=19%  Similarity=0.201  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCce---ecCCCCCChhHHHHHHHHhc--CCc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGV  227 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~  227 (341)
                      +|..+||+|+ +++|.+.++.+...|+ +|+.+++++++  .+.+++.|...   ..|-.+.+ ++.+.+.+...  +++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~-~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPG-DVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHH-HHHHHHHHHHHHcCCC
Confidence            4678899987 8999999999999999 88888886543  34566677543   23444332 12222222222  479


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+++++.|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.26  E-value=0.0056  Score=50.78  Aligned_cols=79  Identities=20%  Similarity=0.221  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh-hH----HHHHHcCCcee---cCCCCCCh--hHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RF----EEAKKFGVTDF---VNTSEHDR--PIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~-~~----~~~~~~g~~~v---v~~~~~~~--~~~~~i~~~~~  224 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.++++.+ +.    +.+++.|....   .|..+.+.  .+.+.+.+.. 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            4778899986 9999999998889999 8888887754 32    33455665432   34433221  1222322222 


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++++.|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            479999998874

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.001  Score=54.35  Aligned_cols=100  Identities=16%  Similarity=0.177  Sum_probs=65.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ecCCCCCChhHHHHHHHHhcCCccEEE
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~~~d~vl  231 (341)
                      ..+|.+||-+|+|. |..+..+++..+. .|++++.+++..+.+++.....  .+.....+  +......+..+.||.++
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~fD~i~  126 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVAPTLPDGHFDGIL  126 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccccc--cccccccccccccccee
Confidence            36789999998763 6677788876655 8999999999999888743221  11111111  33333333445899884


Q ss_pred             -eccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          232 -ECTGN----------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       232 -d~~g~----------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                       |.+..          ...+..+.+.|+|+ |+++...
T Consensus       127 fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~~  163 (229)
T d1zx0a1         127 YDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  163 (229)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             ecccccccccccccCHHHHHHHHHHHcCCC-cEEEEEe
Confidence             65432          12556788999998 9998753

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.0079  Score=50.04  Aligned_cols=42  Identities=24%  Similarity=0.326  Sum_probs=37.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  198 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~  198 (341)
                      +|.++||+|+ +++|++.+..+...|+ +|+.+++++++.+.+.
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~   55 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVV   55 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence            5889999987 8999999999999999 9999999999877653

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.22  E-value=0.0098  Score=48.92  Aligned_cols=79  Identities=24%  Similarity=0.269  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCc---e--ecCCCCCC--hhHHHHHHHHhcCC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT---D--FVNTSEHD--RPIQEVIAEMTNGG  226 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~---~--vv~~~~~~--~~~~~~i~~~~~~~  226 (341)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+. +++..   .  ..|..+.+  ..+.+.+.+.. ++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            4788899986 9999999999999999 8999999988877544 34321   1  22333322  11333333333 47


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999998874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.19  E-value=0.0049  Score=51.10  Aligned_cols=79  Identities=25%  Similarity=0.369  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-----HHHcCCce---ecCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~--  224 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.     .++.|...   ..|..+.+ ...+.+.+...  
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTD-IVTKTIQQIDADL   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHH-HHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHh
Confidence            4678999987 8999999999999999 89999998876543     23445432   23443332 12222322222  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++++.|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            479999998773

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.0088  Score=49.31  Aligned_cols=79  Identities=20%  Similarity=0.298  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc----CCce----ecCCCCCChhHHHHHHHHhc-
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD----FVNTSEHDRPIQEVIAEMTN-  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~----vv~~~~~~~~~~~~i~~~~~-  224 (341)
                      .|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+. ++    +...    ..|..+.+ ++.+.+.+... 
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQ-QLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHH-HHHHHHHHHHHH
Confidence            4788999987 8999999999999999 8999999988866543 22    1111    23444322 12233333222 


Q ss_pred             -CCccEEEeccCC
Q 019414          225 -GGVDRSVECTGN  236 (341)
Q Consensus       225 -~~~d~vld~~g~  236 (341)
                       +++|+++++.|.
T Consensus        80 ~G~iDilVnnAg~   92 (254)
T d2gdza1          80 FGRLDILVNNAGV   92 (254)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCcCeecccccc
Confidence             379999998874

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.17  E-value=0.0068  Score=50.63  Aligned_cols=78  Identities=28%  Similarity=0.380  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc--e----ecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVT--D----FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~--~----vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .|.++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.+..  .    ..|..+.+ ...+.+.+...
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~   80 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEAS-GQDDIINTTLA   80 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHH-HHHHHHHHHHH
Confidence            4788999987 8999999999999999 899999998886643    334432  1    23443332 12222222222


Q ss_pred             --CCccEEEeccC
Q 019414          225 --GGVDRSVECTG  235 (341)
Q Consensus       225 --~~~d~vld~~g  235 (341)
                        +++|+++++.|
T Consensus        81 ~~G~iDilVnnAG   93 (274)
T d1xhla_          81 KFGKIDILVNNAG   93 (274)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCceEEEeecc
Confidence              37999999876

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.17  E-value=0.0062  Score=50.83  Aligned_cols=79  Identities=27%  Similarity=0.365  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc------eecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT------DFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~------~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+..      ...|..+.+ .+.+.+.+...
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~-~v~~~~~~~~~   81 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTED-GQDQIINSTLK   81 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHH-HHHHHHHHHHH
Confidence            4678899986 9999999999999999 8999999998866543    33321      123443322 12222332222


Q ss_pred             --CCccEEEeccCC
Q 019414          225 --GGVDRSVECTGN  236 (341)
Q Consensus       225 --~~~d~vld~~g~  236 (341)
                        +++|+++++.|.
T Consensus        82 ~~g~iDilvnnAG~   95 (272)
T d1xkqa_          82 QFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCceEEEeCCcc
Confidence              479999998763

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.15  E-value=0.026  Score=46.76  Aligned_cols=101  Identities=22%  Similarity=0.261  Sum_probs=63.9

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC-hhhHH----HHHHcCCcee---cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFE----EAKKFGVTDF---VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~-~~~~~----~~~~~g~~~v---v~~~~~~~~~~~~i~~~~~--  224 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++ ++..+    .+++.|.+..   .|..+.+ .+.+.+.+...  
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~-~v~~~~~~~~~~~   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVE-DIVRMFEEAVKIF   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHH-HHHHHHHHHHHHh
Confidence            4788999987 9999999999999999 78777665 44433    3445565432   2333321 23333333322  


Q ss_pred             CCccEEEeccCCh-------------------------HHHHHHHHHhcCCCcEEEEEcc
Q 019414          225 GGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       225 ~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +++|+++++.|..                         ...+.+...+... |+++.++.
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s  153 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGS  153 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECC
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-cccccccc
Confidence            3799999887741                         1244566666776 77777754

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.13  E-value=0.014  Score=49.13  Aligned_cols=79  Identities=14%  Similarity=0.200  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-----HHHcCCce-e--cCCCCCChhHHHHHHHHh--c
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-----AKKFGVTD-F--VNTSEHDRPIQEVIAEMT--N  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-----~~~~g~~~-v--v~~~~~~~~~~~~i~~~~--~  224 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.     .++.|... .  .|..+.+ ...+.+....  .
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~-~v~~~~~~~~~~~  101 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPD-MVQNTVSELIKVA  101 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHH-HHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChH-HHHHHhhhhhhhc
Confidence            5788999986 9999999999999999 99999999877543     22334432 2  3333322 1222222222  2


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++++.|.
T Consensus       102 g~iDilvnnAg~  113 (294)
T d1w6ua_         102 GHPNIVINNAAG  113 (294)
T ss_dssp             CSCSEEEECCCC
T ss_pred             cccchhhhhhhh
Confidence            479999998874

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.12  E-value=0.0069  Score=50.27  Aligned_cols=79  Identities=22%  Similarity=0.325  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc--e----ecCCCCCChhHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT--D----FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~--~----vv~~~~~~~~~~~~i~~~~~  224 (341)
                      +|..+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    +.+..  .    ..|..+.+ ++.+.+.+...
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~-~v~~~~~~~~~   81 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDA-GQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHH-HHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHH-HHHHHHHHHHH
Confidence            4677888987 9999999999999999 8999999988866433    33321  1    23443332 12222333222


Q ss_pred             --CCccEEEeccCC
Q 019414          225 --GGVDRSVECTGN  236 (341)
Q Consensus       225 --~~~d~vld~~g~  236 (341)
                        +++|+++++.|.
T Consensus        82 ~~g~iDilvnnAG~   95 (264)
T d1spxa_          82 KFGKLDILVNNAGA   95 (264)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HhCCCCEeeccccc
Confidence              479999998773

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.08  E-value=0.03  Score=42.70  Aligned_cols=91  Identities=15%  Similarity=0.163  Sum_probs=63.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCC-ceecCCCCCChhHHHHHHHHhcCCccEEEeccCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  236 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~  236 (341)
                      +|+|+|.|.+|...+.-++..|. .+|++.+++++..+.+++.+. +......+.          ......|+|+-|+..
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~----------~~~~~~dlIila~p~   72 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK----------VEDFSPDFVMLSSPV   72 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG----------GGGTCCSEEEECSCH
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh----------hhccccccccccCCc
Confidence            68999999999999988888885 389999999999999999886 333222111          111257888888764


Q ss_pred             hH---HHHHHHHHhcCCCcEEEEEccC
Q 019414          237 ID---NMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       237 ~~---~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ..   .+.+....+.++ ..++.++..
T Consensus        73 ~~~~~vl~~l~~~~~~~-~ii~d~~s~   98 (171)
T d2g5ca2          73 RTFREIAKKLSYILSED-ATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             hhhhhhhhhhhcccccc-ccccccccc
Confidence            22   344455566665 666666643

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.05  E-value=0.01  Score=48.97  Aligned_cols=79  Identities=18%  Similarity=0.260  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCCh--hHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDR--PIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~  225 (341)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.    +++.|...   ..|..+.+.  .+.+.+.+.. +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            5788999987 8999999999999999 89999999887654    34455532   233333220  1222333322 3


Q ss_pred             CccEEEeccCC
Q 019414          226 GVDRSVECTGN  236 (341)
Q Consensus       226 ~~d~vld~~g~  236 (341)
                      ++|+++++.|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            79999998874

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.04  E-value=0.012  Score=48.42  Aligned_cols=78  Identities=22%  Similarity=0.334  Sum_probs=52.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      |..+||+|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|-.+.+ ++.+.+.+...  ++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~-~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVP-EIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHH-HHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence            456689987 8999999999999999 899999998876543    3455432   23443332 13222333222  47


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999998874

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.04  E-value=0.0044  Score=51.98  Aligned_cols=102  Identities=15%  Similarity=0.085  Sum_probs=68.6

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-e--ecCCCCCChhHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-D--FVNTSEHDRPIQEVIA  220 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~--vv~~~~~~~~~~~~i~  220 (341)
                      |.....++++++||=+|+| .|..+..+++..|+ .|++++.++...+.+++    .|.. .  ++..+..+  +     
T Consensus        59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~--l-----  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE--I-----  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccccc--c-----
Confidence            3455688999999999986 36677788888888 89999999988776654    3432 1  22111111  0     


Q ss_pred             HHhcCCccEEEecc-----CC-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          221 EMTNGGVDRSVECT-----GN-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       221 ~~~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ...++.||+|+-.-     .. ...+.++.+.|+|+ |++++...
T Consensus       130 ~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            11224799987421     12 24688999999998 99888754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.014  Score=49.17  Aligned_cols=80  Identities=16%  Similarity=0.255  Sum_probs=52.7

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc--------CCce---ecCCCCCChhHHHHHHH
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF--------GVTD---FVNTSEHDRPIQEVIAE  221 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~--------g~~~---vv~~~~~~~~~~~~i~~  221 (341)
                      -+|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ +++        +...   ..|..+.+ .+.+.+.+
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~-~v~~~~~~   87 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEE-EVNNLVKS   87 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHH-HHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHH-HHHHHHHH
Confidence            46889999987 8999999999999999 899999998876543 222        2221   13333322 12222322


Q ss_pred             Hhc--CCccEEEeccCC
Q 019414          222 MTN--GGVDRSVECTGN  236 (341)
Q Consensus       222 ~~~--~~~d~vld~~g~  236 (341)
                      ...  +++|+++++.|.
T Consensus        88 ~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHhCCeEEEEeeccc
Confidence            222  379999998774

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.98  E-value=0.017  Score=47.40  Aligned_cols=79  Identities=22%  Similarity=0.319  Sum_probs=50.3

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCceec--CCCCCCh--hHHHHHHHHhc
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFV--NTSEHDR--PIQEVIAEMTN  224 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~vv--~~~~~~~--~~~~~i~~~~~  224 (341)
                      +|.++||+|+ |  ++|++.++.+...|+ +|+.++++++..+.++    +.+....+  |..+.+.  .+.+.+.+.. 
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc-
Confidence            5788999997 5  799999999989999 7888888876554433    23332332  3332210  1222233322 


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++++.|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            479999998763

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.02  Score=43.36  Aligned_cols=98  Identities=24%  Similarity=0.257  Sum_probs=67.8

Q ss_pred             hhhhhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhc
Q 019414          146 GATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       146 ~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      .++.+... .-.|.+++|.|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|.. +.     .  +.+.+     
T Consensus        12 ~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~-----~--~~~a~-----   77 (163)
T d1li4a1          12 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT-----T--MDEAC-----   77 (163)
T ss_dssp             HHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-----C--HHHHT-----
T ss_pred             HHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee-----e--hhhhh-----
Confidence            33444444 4478999999999999999999999999 999999988664444333432 21     1  22222     


Q ss_pred             CCccEEEeccCChHH-HHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRSVECTGNIDN-MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~vld~~g~~~~-~~~~~~~l~~~~g~~v~~g  258 (341)
                      ...|+++=++|.... -.+.++.++++ ..+...|
T Consensus        78 ~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~G  111 (163)
T d1li4a1          78 QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIG  111 (163)
T ss_dssp             TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECS
T ss_pred             hhccEEEecCCCccchhHHHHHhccCC-eEEEEec
Confidence            237899999987543 34677888886 5555555

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.95  E-value=0.009  Score=48.11  Aligned_cols=101  Identities=17%  Similarity=0.202  Sum_probs=67.7

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCcee--cCCCCCChhHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAE  221 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v--v~~~~~~~~~~~~i~~  221 (341)
                      +.+.++++++++||=+|+| .|..+..+++. |. +|++++.+++..+.+++    .+.+.+  +..+..+  +     .
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~--l-----~   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ--M-----P   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C--C-----C
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccc--c-----c
Confidence            4677899999999999986 46666667654 66 89999999987776653    444322  2111111  0     1


Q ss_pred             HhcCCccEEEeccC-----C-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          222 MTNGGVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       222 ~~~~~~d~vld~~g-----~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +.++.||+|+-.-.     . ...+.++.+.|+|+ |++++...
T Consensus        77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~~  119 (231)
T d1vl5a_          77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVDN  119 (231)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            12347999974321     2 24688999999998 99988643

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.92  E-value=0.0027  Score=52.51  Aligned_cols=74  Identities=23%  Similarity=0.193  Sum_probs=50.3

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc----eecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~----~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      +.||+|+ +++|++.++-+...|+ +|+.++++.++.+.+++.+..    .+.+..+. ..+.+.+.+.. +++|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~-~~~~~~~~~~~-G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQEP-AELIEAVTSAY-GQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCSH-HHHHHHHHHHH-SCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHHH-HHHHHHHHHHc-CCCCEEEEC
Confidence            6789987 8999999998889999 899999988887776654321    22222221 12333343333 479999986


Q ss_pred             cC
Q 019414          234 TG  235 (341)
Q Consensus       234 ~g  235 (341)
                      .|
T Consensus        79 Ag   80 (252)
T d1zmta1          79 DI   80 (252)
T ss_dssp             CC
T ss_pred             Cc
Confidence            65

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.83  E-value=0.028  Score=43.15  Aligned_cols=98  Identities=19%  Similarity=0.185  Sum_probs=63.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCEEEEEcC--ChhhHHHHHHcCCceecCCCCCChhHHHHHHHH----------hcC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAG-ASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM----------TNG  225 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~--~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~----------~~~  225 (341)
                      +|.|.|.|-+|...+..+.... . .++++-.  +.+....+.+.+.+......+.    .......          ...
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEEF----IPRFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGG----HHHHHHHTCCCSCBHHHHHT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccccc----eeeecccCccccchhhhhhc
Confidence            5889999999998888776543 4 5665532  3344556666665443221111    1111110          013


Q ss_pred             CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC
Q 019414          226 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  262 (341)
Q Consensus       226 ~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  262 (341)
                      ++|+|+||+|.....+.+-.++..+ .+.|+.+....
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~~  114 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA  114 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcC-CCEEEECCCCc
Confidence            6999999999888888888999997 88888876543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.78  E-value=0.013  Score=48.87  Aligned_cols=78  Identities=23%  Similarity=0.344  Sum_probs=49.6

Q ss_pred             CCEE-EEECC-CHHHHHHHH-HHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCC--hhHHHHHHHHhc
Q 019414          157 GSSV-AVFGL-GAVGLAAAE-GARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHD--RPIQEVIAEMTN  224 (341)
Q Consensus       157 g~~v-lI~G~-g~~G~~a~~-la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~--~~~~~~i~~~~~  224 (341)
                      |.+| ||+|+ +++|+++++ +++..|+ +|+.+.+++++.+.+    ++.+...   ..|..+.+  ..+.+.+.+.. 
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-   79 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   79 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-
Confidence            6677 66787 999998765 5666688 899999999886543    3334332   23443322  11333444433 


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|++++..|-
T Consensus        80 g~iDiLVnNAGi   91 (275)
T d1wmaa1          80 GGLDVLVNNAGI   91 (275)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCcEEEEEcCCc
Confidence            379999998873

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=95.68  E-value=0.015  Score=47.73  Aligned_cols=78  Identities=24%  Similarity=0.317  Sum_probs=51.7

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--CC
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GG  226 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~  226 (341)
                      +..+||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+.+ .+.+.+.+...  ++
T Consensus        10 nKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~-~v~~~~~~~~~~~g~   87 (251)
T d2c07a1          10 NKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKE-EISEVINKILTEHKN   87 (251)
T ss_dssp             SCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHH-HHHHHHHHHHHHCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHhcCC
Confidence            567788887 8999999988888899 899999998886543    3445432   23443322 12222222211  47


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus        88 iDilvnnag~   97 (251)
T d2c07a1          88 VDILVNNAGI   97 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceeeeecccc
Confidence            9999998774

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.66  E-value=0.031  Score=45.05  Aligned_cols=102  Identities=19%  Similarity=0.163  Sum_probs=66.6

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ....++||++||=+|+|. |..+..+|+..|. .+|++++.+++..+.+++.    +....+..+...   ..... ...
T Consensus        67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~---~~~~~-~~~  141 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK---PEEYR-ALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC---GGGGT-TTC
T ss_pred             cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCC---ccccc-ccc
Confidence            456899999999999864 7788888888763 4999999999998877653    221112122111   00010 111


Q ss_pred             CCccEEEeccCC----hHHHHHHHHHhcCCCcEEEEE
Q 019414          225 GGVDRSVECTGN----IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       225 ~~~d~vld~~g~----~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ..+|+++..+.-    ...+..+.+.|+++ |++++.
T Consensus       142 ~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            368888754332    22577888999998 988765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.66  E-value=0.0027  Score=52.05  Aligned_cols=75  Identities=24%  Similarity=0.209  Sum_probs=50.8

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCCh--hHHHHHHHHhcCCccEEEe
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~--~~~~~i~~~~~~~~d~vld  232 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    ....|..+.+.  .+.+.+.+.. +++|++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~----~~~~Dv~~~~~v~~~~~~~~~~~-g~iDiLVn   79 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF----GVEVDVTDSDAVDRAFTAVEEHQ-GPVEVLVS   79 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE----EEECCTTCHHHHHHHHHHHHHHH-SSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCce----EEEEecCCHHHHHHHHHHHHHhc-CCceEEEe
Confidence            5788999987 8999999999999999 9999998876643221    12334443321  1233333332 37999999


Q ss_pred             ccCC
Q 019414          233 CTGN  236 (341)
Q Consensus       233 ~~g~  236 (341)
                      +.|.
T Consensus        80 nAG~   83 (237)
T d1uzma1          80 NAGL   83 (237)
T ss_dssp             ECSC
T ss_pred             eecc
Confidence            8874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.66  E-value=0.019  Score=47.33  Aligned_cols=101  Identities=22%  Similarity=0.246  Sum_probs=63.3

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEE-EcCChhhHH----HHHHcCCcee---cCCCCCCh--hHHHHHHHHh
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFE----EAKKFGVTDF---VNTSEHDR--PIQEVIAEMT  223 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~-v~~~~~~~~----~~~~~g~~~v---v~~~~~~~--~~~~~i~~~~  223 (341)
                      -.|.++||+|+ +++|.+.++.+...|+ +|+. ..++++..+    .+++.|.+..   .|..+.+.  .+.+.+.+..
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            45889999987 9999999999999999 6665 455655543    3455666432   33332210  1223333332


Q ss_pred             cCCccEEEeccCCh-------------------------HHHHHHHHHhcCCCcEEEEEc
Q 019414          224 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       224 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~~g~~v~~g  258 (341)
                       +++|+++++.|..                         ...+.++..+... |.++.+.
T Consensus        83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~  140 (259)
T d1ja9a_          83 -GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTS  140 (259)
T ss_dssp             -SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             -CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Ccccccc
Confidence             3699999988741                         1344566666776 7766664

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.64  E-value=0.016  Score=45.83  Aligned_cols=81  Identities=26%  Similarity=0.260  Sum_probs=59.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++.+.++.+....+|.+.+ ..+           ++.....|+.+=|.
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~-----------~~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE-----------DVLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG-----------GGGGCCCSEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc-----------ccccccceeeeccc
Confidence            368899999999999999999999999 99999999999999888887643 111           12223688888665


Q ss_pred             CChHHHHHHHHHhc
Q 019414          235 GNIDNMISAFECVH  248 (341)
Q Consensus       235 g~~~~~~~~~~~l~  248 (341)
                      .....-+...+.++
T Consensus        92 ~~~~I~~~~a~~i~  105 (201)
T d1c1da1          92 MGGVITTEVARTLD  105 (201)
T ss_dssp             CSCCBCHHHHHHCC
T ss_pred             ccccccHHHHhhhh
Confidence            44233333444454

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.63  E-value=0.021  Score=48.27  Aligned_cols=79  Identities=23%  Similarity=0.253  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC---------hhhHHH----HHHcCCceecCCCCCCh--hHHHHH
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS---------SKRFEE----AKKFGVTDFVNTSEHDR--PIQEVI  219 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~---------~~~~~~----~~~~g~~~vv~~~~~~~--~~~~~i  219 (341)
                      .|.++||+|+ +++|.+.++.+...|+ +|+..+++         +++.+.    +...+.....|..+.+.  .+.+.+
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            4778899987 8999999999999999 88887553         223222    22344444455444321  123333


Q ss_pred             HHHhcCCccEEEeccCC
Q 019414          220 AEMTNGGVDRSVECTGN  236 (341)
Q Consensus       220 ~~~~~~~~d~vld~~g~  236 (341)
                      .+.. +++|+++++.|.
T Consensus        85 ~~~~-G~iDiLVnNAGi  100 (302)
T d1gz6a_          85 LDTF-GRIDVVVNNAGI  100 (302)
T ss_dssp             HHHT-SCCCEEEECCCC
T ss_pred             HHHc-CCCCEEEECCcc
Confidence            3322 479999998874

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.62  E-value=0.022  Score=45.87  Aligned_cols=106  Identities=15%  Similarity=0.033  Sum_probs=66.7

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCcee-------------cCCCCCChh-H
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-------------VNTSEHDRP-I  215 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-------------v~~~~~~~~-~  215 (341)
                      ....+.++.+||..|+|. |..+..+|+ .|+ .|++++.+++..+.+++......             ......... .
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445778999999999875 777888876 698 99999999999888765322110             000000000 0


Q ss_pred             HHHHHHH---hcCCccEEEeccCC--------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          216 QEVIAEM---TNGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       216 ~~~i~~~---~~~~~d~vld~~g~--------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ...+.++   ..+.+|+|+++..-        ...+..+.++|+|+ |++++...
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence            0001111   12368999986431        23567889999998 98776654

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.59  E-value=0.025  Score=46.48  Aligned_cols=75  Identities=21%  Similarity=0.240  Sum_probs=50.1

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---ecCCCCCChhHHHHHHHHhc--CCccE
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVDR  229 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~~~~~~i~~~~~--~~~d~  229 (341)
                      +||+|+ +++|++.++.+...|+ +|+.+++++++.+.+    ++.|...   ..|..+.+ +..+.+.+...  +++|+
T Consensus         4 alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~-~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           4 ALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRD-QVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHH-HHHHHHHHHHHHTTCCCE
T ss_pred             EEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHHhCCccE
Confidence            588887 8999999888888999 899999999886543    4455432   23444332 12222222222  47999


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      ++++.|.
T Consensus        82 lVnnAG~   88 (255)
T d1gega_          82 IVNNAGV   88 (255)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9998874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=95.55  E-value=0.037  Score=45.47  Aligned_cols=79  Identities=23%  Similarity=0.323  Sum_probs=50.5

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHH-----HHcCCcee---cCCCCCC--hhHHHHHHHHh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEA-----KKFGVTDF---VNTSEHD--RPIQEVIAEMT  223 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~-~~~~~~-----~~~g~~~v---v~~~~~~--~~~~~~i~~~~  223 (341)
                      +|.++||+|+ +++|++.++.+...|+ +|+.+++++ ++.+.+     ++.|....   .|..+.+  ..+.+.+.+..
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5778899987 8999999999999999 899998864 443322     23344322   2333322  01223333322


Q ss_pred             cCCccEEEeccCC
Q 019414          224 NGGVDRSVECTGN  236 (341)
Q Consensus       224 ~~~~d~vld~~g~  236 (341)
                       +++|+++++.|.
T Consensus        82 -G~iDiLVnnAG~   93 (260)
T d1x1ta1          82 -GRIDILVNNAGI   93 (260)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEeeccc
Confidence             479999998874

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.51  E-value=0.031  Score=42.83  Aligned_cols=71  Identities=15%  Similarity=0.147  Sum_probs=48.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCC---ceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV---TDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~---~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      ..++.+|+|+|+|+.+.+++..+...+ .+++.+.|+.++.+.+.+ ++.   ...+...+           .....+|+
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-----------~~~~~~di   82 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-----------IPLQTYDL   82 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CCCSCCSE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhcc-----------ccccccce
Confidence            347889999999999999888777655 589999999988765533 331   11111111           11136899


Q ss_pred             EEeccCC
Q 019414          230 SVECTGN  236 (341)
Q Consensus       230 vld~~g~  236 (341)
                      +++|++.
T Consensus        83 iIN~tp~   89 (171)
T d1p77a1          83 VINATSA   89 (171)
T ss_dssp             EEECCCC
T ss_pred             eeecccc
Confidence            9999864

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.11  Score=44.06  Aligned_cols=105  Identities=15%  Similarity=0.153  Sum_probs=68.6

Q ss_pred             hhhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-----------CCc----eecCCCCC
Q 019414          147 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----------GVT----DFVNTSEH  211 (341)
Q Consensus       147 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-----------g~~----~vv~~~~~  211 (341)
                      -+++..+++++++||=+|+|. |..+.++|+..+..++++++.+++..+.+++.           |..    .++..+-.
T Consensus       142 ~~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~  220 (328)
T d1nw3a_         142 QMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL  220 (328)
T ss_dssp             HHHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred             HHHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence            356778999999999898864 88888999999987899999999887766542           211    12211112


Q ss_pred             ChhHHHHHHHHhcCCccEEEe-ccC-Ch---HHHHHHHHHhcCCCcEEEEEc
Q 019414          212 DRPIQEVIAEMTNGGVDRSVE-CTG-NI---DNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       212 ~~~~~~~i~~~~~~~~d~vld-~~g-~~---~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.++.+.+.+     +|+|+- ..- .+   ..+.+.++.|+|| |+++...
T Consensus       221 ~~~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         221 SEEWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             SHHHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             ccccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            2123322221     577763 221 22   3466788889998 9998764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.49  E-value=0.27  Score=36.25  Aligned_cols=94  Identities=17%  Similarity=0.125  Sum_probs=62.4

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC--CccEEEecc
Q 019414          158 SSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVECT  234 (341)
Q Consensus       158 ~~vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~--~~d~vld~~  234 (341)
                      .+|.|+| .|.+|...+..++..|+ .|.+.+++.+........+++.++...... ...+.+.+..+.  .=.+++|+.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~v~~~~~~~~~~~~iiiD~~   87 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVPIN-LTLETIERLKPYLTENMLLADLT   87 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSCGG-GHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccchh-hheeeeecccccccCCceEEEec
Confidence            4799999 59999999999999999 899999988776665556676655433322 244444444443  335788988


Q ss_pred             CChHHHHHHHHHhcCCCcEEE
Q 019414          235 GNIDNMISAFECVHDGWGVAV  255 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v  255 (341)
                      +.+..+.+.+....+  .+++
T Consensus        88 Svk~~~~~~~~~~~~--~~~v  106 (152)
T d2pv7a2          88 SVKREPLAKMLEVHT--GAVL  106 (152)
T ss_dssp             SCCHHHHHHHHHHCS--SEEE
T ss_pred             ccCHHHHHHHHHHcc--CCEE
Confidence            765555454444444  4444

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.44  E-value=0.0099  Score=48.72  Aligned_cols=77  Identities=14%  Similarity=0.206  Sum_probs=48.9

Q ss_pred             CEEEEECC-CHHHHHHHHHHH---HcCCCEEEEEcCChhhHHHHHHc---CCc---eecCCCCCCh--hHHHHHHHHhc-
Q 019414          158 SSVAVFGL-GAVGLAAAEGAR---IAGASRIIGVDRSSKRFEEAKKF---GVT---DFVNTSEHDR--PIQEVIAEMTN-  224 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~---~~g~~~vv~v~~~~~~~~~~~~~---g~~---~vv~~~~~~~--~~~~~i~~~~~-  224 (341)
                      .+|||+|+ +++|++.++.+.   ..|+ +|+.+.+++++.+.++++   +..   ..+|..+.+.  .+.+.+++... 
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            47999987 899999876554   3577 899999998886655432   222   1234444321  23334433333 


Q ss_pred             CCccEEEeccC
Q 019414          225 GGVDRSVECTG  235 (341)
Q Consensus       225 ~~~d~vld~~g  235 (341)
                      +++|++++..|
T Consensus        82 ~~iDiLvnNAg   92 (248)
T d1snya_          82 QGLNVLFNNAG   92 (248)
T ss_dssp             GCCSEEEECCC
T ss_pred             CCcceEEeecc
Confidence            37999999876

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.41  E-value=0.048  Score=43.97  Aligned_cols=101  Identities=18%  Similarity=0.121  Sum_probs=64.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC----ceecCCCCCChhHHHHHHHHhcC
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV----TDFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~----~~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ....++||++||=+|+|. |..+..+|+......|++++.+++..+.+++.-.    ...+......  .    ....+.
T Consensus        68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~--~----~~~~~~  140 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANK--P----QEYANI  140 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC--G----GGGTTT
T ss_pred             HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeecc--C----cccccc
Confidence            456899999999999864 6777777876544599999999999887776422    1122121111  0    011112


Q ss_pred             --CccEEEeccCC----hHHHHHHHHHhcCCCcEEEEEc
Q 019414          226 --GVDRSVECTGN----IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       226 --~~d~vld~~g~----~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                        .+|.++....-    ...+..+.+.|+|+ |.+++.-
T Consensus       141 ~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~~  178 (230)
T d1g8sa_         141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIAI  178 (230)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEEe
Confidence              35556554432    12467788899998 9887663

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.36  E-value=0.022  Score=47.83  Aligned_cols=100  Identities=19%  Similarity=0.136  Sum_probs=66.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eecC-CC----CCChhHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVN-TS----EHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~vv~-~~----~~~~~~~~~i~~~~~~~~d  228 (341)
                      ..++|||+|+|. |.++-.+++..+.++|..++-+++=.+.++++-..  ...+ .+    -.|  ..+.+++...+.+|
T Consensus        80 ~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~D--a~~~l~~~~~~~yD  156 (290)
T d1xj5a_          80 NPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGD--GVAFLKNAAEGSYD  156 (290)
T ss_dssp             CCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESC--HHHHHHTSCTTCEE
T ss_pred             CCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEcc--HHHHHhhccccCcc
Confidence            346899998654 44555777777777999999999999998875311  0000 00    012  45555555455899


Q ss_pred             EEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          229 RSV-ECTG---------NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       229 ~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +|| |+..         +.+-++.+.++|+++ |.++.-..
T Consensus       157 vIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  196 (290)
T d1xj5a_         157 AVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQAE  196 (290)
T ss_dssp             EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEecC
Confidence            876 5543         235688899999998 99887653

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.23  E-value=0.019  Score=43.60  Aligned_cols=71  Identities=17%  Similarity=0.205  Sum_probs=50.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +|.++|.|.+|...+.-+...|+ .|.+.+++.++.+.+...++...-+       ..+.+     ...|+++-|+....
T Consensus         3 kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-------~~e~~-----~~~diii~~v~~~~   69 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAARS-------ARDAV-----QGADVVISMLPASQ   69 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECSS-------HHHHH-----TSCSEEEECCSCHH
T ss_pred             EEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccccch-------hhhhc-----cccCeeeecccchh
Confidence            68899999999988887778899 9999999999999988887653211       22222     13567777766554


Q ss_pred             HHHH
Q 019414          239 NMIS  242 (341)
Q Consensus       239 ~~~~  242 (341)
                      ..+.
T Consensus        70 ~~~~   73 (162)
T d3cuma2          70 HVEG   73 (162)
T ss_dssp             HHHH
T ss_pred             hHHH
Confidence            4443

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.22  E-value=0.031  Score=46.21  Aligned_cols=79  Identities=11%  Similarity=0.127  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCC-cee--cCCCCCChhHHHHHHHHhc--
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGV-TDF--VNTSEHDRPIQEVIAEMTN--  224 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~---~g~-~~v--v~~~~~~~~~~~~i~~~~~--  224 (341)
                      +|.++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.+++   .+. ..+  .|..+. ....+.+.+...  
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKE-EHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCH-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccch-hhHHHHHHHHHHHc
Confidence            5889999985 5  799999999999999 89999888754443332   222 222  222222 112222222222  


Q ss_pred             CCccEEEeccCC
Q 019414          225 GGVDRSVECTGN  236 (341)
Q Consensus       225 ~~~d~vld~~g~  236 (341)
                      +++|+++.+.|.
T Consensus        82 g~id~lV~nag~   93 (274)
T d2pd4a1          82 GSLDFIVHSVAF   93 (274)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCeEEeeccc
Confidence            479999988764

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.18  E-value=0.078  Score=41.95  Aligned_cols=102  Identities=17%  Similarity=0.016  Sum_probs=64.1

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCC
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      ...++||++||=+|+|. |..+..+++..+-.+|++++.+++..+.+++    .+....+..+..+...   . ......
T Consensus        51 ~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~---~-~~~~~~  125 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK---Y-SGIVEK  125 (209)
T ss_dssp             CCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG---T-TTTCCC
T ss_pred             cCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc---c-ccccce
Confidence            46799999999999754 5677777887775699999999988776654    3322222122111000   0 001125


Q ss_pred             ccEEEeccCC----hHHHHHHHHHhcCCCcEEEEEc
Q 019414          227 VDRSVECTGN----IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       227 ~d~vld~~g~----~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|+++....-    ...+..+.+.|+++ |++++.-
T Consensus       126 vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  160 (209)
T d1nt2a_         126 VDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIMV  160 (209)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEEEecccChhhHHHHHHHHHHHhccC-CeEEEEE
Confidence            7777654322    12567788999998 9887763

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.16  E-value=0.014  Score=49.46  Aligned_cols=44  Identities=27%  Similarity=0.423  Sum_probs=32.0

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  194 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~  194 (341)
                      .+.....+|++||-+|+| .|..++.+|+ .|+++|++++.++...
T Consensus        28 ~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~   71 (311)
T d2fyta1          28 YQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILY   71 (311)
T ss_dssp             HHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHH
T ss_pred             HhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHH
Confidence            334456789999999876 4566665555 5877999999887543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.10  E-value=0.015  Score=41.28  Aligned_cols=39  Identities=26%  Similarity=0.404  Sum_probs=32.8

Q ss_pred             CCCCC-CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          153 KPERG-SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       153 ~~~~g-~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      .+.|+ .+|.|+|+|.+|++.++-|+.+|+ ++++.+.++.
T Consensus         6 ~~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2           6 ALRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             TTSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CCCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            34444 469999999999999999999999 8888887655

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.08  E-value=0.01  Score=40.61  Aligned_cols=36  Identities=25%  Similarity=0.366  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      +|.+|+|+|.|..|+++++++...|+ +|++.+.+..
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcC
Confidence            46789999999999999999999999 8999887543

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=95.05  E-value=0.042  Score=44.20  Aligned_cols=102  Identities=19%  Similarity=0.213  Sum_probs=67.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH-----
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM-----  222 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~-----  222 (341)
                      +.....+||-+|++ +|..++.+|+.+. -.++++++.+++..+.+++    .|...-+.....+  ..+.+.++     
T Consensus        56 ~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~--a~~~L~~l~~~~~  132 (227)
T d1susa1          56 KLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDEK  132 (227)
T ss_dssp             HHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCGG
T ss_pred             HhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehH--HHHHHHHHHhccc
Confidence            33455789999874 4778888888764 2399999999988776654    5654333222222  44444444     


Q ss_pred             hcCCccEEE-eccC--ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          223 TNGGVDRSV-ECTG--NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       223 ~~~~~d~vl-d~~g--~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ..+.||.|| |+--  ....++.++++++++ |.++.=+
T Consensus       133 ~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DN  170 (227)
T d1susa1         133 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  170 (227)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEET
T ss_pred             cCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEcc
Confidence            234799997 5432  235788999999997 8877654

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.99  E-value=0.037  Score=47.17  Aligned_cols=101  Identities=26%  Similarity=0.345  Sum_probs=63.8

Q ss_pred             CCCCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh--c
Q 019414          153 KPERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT--N  224 (341)
Q Consensus       153 ~~~~g~~vlI~G~--g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~--~  224 (341)
                      .+++|++||=.++  |+.+.   .+| ..|+..|++++.+++..+.+++    .|...-+.....+  ..+.+..+.  +
T Consensus       142 ~~~~g~~VLDl~~g~G~~si---~~a-~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d--~~~~~~~~~~~~  215 (324)
T d2as0a2         142 WVQPGDRVLDVFTYTGGFAI---HAA-IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGS--AFEEMEKLQKKG  215 (324)
T ss_dssp             GCCTTCEEEETTCTTTHHHH---HHH-HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHTT
T ss_pred             hcCCCCeeecccCcccchhh---hhh-hcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeech--hhhhhHHHHhcc
Confidence            3678999987754  55444   333 3477799999999999887765    4553222222233  444443332  2


Q ss_pred             CCccEEE-eccCC--------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          225 GGVDRSV-ECTGN--------------IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       225 ~~~d~vl-d~~g~--------------~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +.||+|+ |.-..              .+.+..++++++|+ |.++.+...
T Consensus       216 ~~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s  265 (324)
T d2as0a2         216 EKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCS  265 (324)
T ss_dssp             CCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECC
T ss_pred             CCCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCC
Confidence            3899987 43221              23567788899998 999988643

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.97  E-value=0.016  Score=47.80  Aligned_cols=94  Identities=16%  Similarity=0.190  Sum_probs=60.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce---ecCCCCCChhHHHHHHHHhcC
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~---vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      .+++|++||-.++| +|..++.+|+. |..+|++++.+++..+.+++    .|.+.   ++..+..         +....
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~---------~~~~~  172 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR---------DFPGE  172 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT---------TCCCC
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH---------HhccC
Confidence            46899999988653 24445566665 44499999999998887764    34432   2222111         12223


Q ss_pred             -CccEEE-ec-cCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          226 -GVDRSV-EC-TGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       226 -~~d~vl-d~-~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                       .+|.|+ +. ..+.+.++.+++.++++ |.+....
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~  207 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHN  207 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEe
Confidence             688665 43 33456788999999997 8776543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.96  E-value=0.009  Score=48.79  Aligned_cols=96  Identities=18%  Similarity=0.248  Sum_probs=64.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCce-ecCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD-FVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~-vv~~~~~~~~~~~~i~~~  222 (341)
                      ++......+..+||=+|+|. |..+..+++ .|+ .|++++.+++..+.+++.    +... ++..   +      +.++
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~---d------~~~l  100 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQG---D------VLEI  100 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEES---C------GGGC
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheeh---h------hhhc
Confidence            34455667788999999875 777777776 577 899999999888877753    3211 1111   1      1122


Q ss_pred             hc-CCccEEEeccCC---------hHHHHHHHHHhcCCCcEEEE
Q 019414          223 TN-GGVDRSVECTGN---------IDNMISAFECVHDGWGVAVL  256 (341)
Q Consensus       223 ~~-~~~d~vld~~g~---------~~~~~~~~~~l~~~~g~~v~  256 (341)
                      .. +.||+|+-..+.         ...++.+.++|+|+ |+++.
T Consensus       101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            22 379998854321         13677899999998 98876

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.92  E-value=0.056  Score=41.95  Aligned_cols=40  Identities=25%  Similarity=0.297  Sum_probs=34.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  198 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~  198 (341)
                      .+|.|+|+|.+|...++++...|+ .|+..+.+++..+...
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhhh
Confidence            358999999999998888888999 8999999998766543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.026  Score=46.03  Aligned_cols=47  Identities=32%  Similarity=0.345  Sum_probs=39.0

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCc
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVT  203 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~  203 (341)
                      +|..+||+|+ +++|.+.++-+...|+ +|+.+++++++.+. +++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            6888999987 8999999999999999 89999998887664 4556543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.72  E-value=0.094  Score=40.12  Aligned_cols=44  Identities=14%  Similarity=0.229  Sum_probs=38.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  202 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~  202 (341)
                      .+|-|+|.|.+|..++.-+...|+ .|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468899999999998888888899 89999999999988877654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.65  E-value=0.014  Score=45.36  Aligned_cols=36  Identities=19%  Similarity=0.271  Sum_probs=31.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      +.+|+|+|+|+.|+.++..++..|++.|+.+++++.
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999999999999999999999866878877653

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.61  E-value=0.091  Score=45.95  Aligned_cols=105  Identities=14%  Similarity=0.112  Sum_probs=67.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC---------------Ccee-cCCCCC
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---------------VTDF-VNTSEH  211 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g---------------~~~v-v~~~~~  211 (341)
                      +++..++++|+++|=+|+| +|..+.++|+..|..+|++++.++...+.+++..               .... +.-...
T Consensus       208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            4677899999998888887 4889999999999879999999998877765421               1111 111111


Q ss_pred             ChhHHHHHHHHhcCCccEEEe-cc-CC---hHHHHHHHHHhcCCCcEEEEEc
Q 019414          212 DRPIQEVIAEMTNGGVDRSVE-CT-GN---IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       212 ~~~~~~~i~~~~~~~~d~vld-~~-g~---~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.+..   .... ..+|+++- +. -.   ...+.+.++.|+|| |+++...
T Consensus       287 ~~~~~---d~~~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         287 DNNRV---AELI-PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TCHHH---HHHG-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hcccc---cccc-ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            10111   1111 13677763 22 12   23577888899998 9998764

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.60  E-value=0.077  Score=43.18  Aligned_cols=79  Identities=18%  Similarity=0.261  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCCh-hHHHHHHHHhc--C
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDR-PIQEVIAEMTN--G  225 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~-~~~~~i~~~~~--~  225 (341)
                      .|.++||+|+ |  ++|.+.+..+...|+ +|+.+.++++..+.+++    .+....+.....+. ...+...+...  +
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            5789999986 5  688999899999999 78888888776555433    34333322222221 12223333322  2


Q ss_pred             CccEEEeccC
Q 019414          226 GVDRSVECTG  235 (341)
Q Consensus       226 ~~d~vld~~g  235 (341)
                      ..|+.+++.+
T Consensus        83 ~~d~~v~~a~   92 (258)
T d1qsga_          83 KFDGFVHSIG   92 (258)
T ss_dssp             SEEEEEECCC
T ss_pred             ccceEEEeec
Confidence            7899998765

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.59  E-value=0.14  Score=39.09  Aligned_cols=100  Identities=22%  Similarity=0.275  Sum_probs=61.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHHHHcCCceecCCCCCChhHHH-------HHHHHhcCCccE
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS--SKRFEEAKKFGVTDFVNTSEHDRPIQE-------VIAEMTNGGVDR  229 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~--~~~~~~~~~~g~~~vv~~~~~~~~~~~-------~i~~~~~~~~d~  229 (341)
                      +|.|.|-|-+|...++++...+--.++++-..  ......+..++.+......+....+.+       .+.... .++|+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~vDv   81 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEADI   81 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCSE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-cCCCE
Confidence            58899999999999988765553266655432  233445555665432222111000000       001111 25999


Q ss_pred             EEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          230 SVECTGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       230 vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      |+||+|.....+.+-.++..+ .++++.+..
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~  111 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKG-IKAIFQGGE  111 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred             EEEccCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence            999999877888888899887 788877644

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.53  E-value=0.1  Score=38.82  Aligned_cols=84  Identities=15%  Similarity=0.192  Sum_probs=58.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|.++|+|.+|.+.+.-....|. ++++.+++.++.+.+ +++|+...-     +  ..+.+.     ..|+||-|+- +
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~-----~--~~~~~~-----~~dvIilavk-p   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAM-----S--HQDLID-----QVDLVILGIK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCS-----S--HHHHHH-----TCSEEEECSC-G
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeec-----h--hhhhhh-----ccceeeeecc-h
Confidence            47889999999988776666677 889999998887665 567764321     1  222222     3789998884 4


Q ss_pred             HHHHHHHHHhcCCCcEEEEE
Q 019414          238 DNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ..++..++.+.++ ..++.+
T Consensus        68 ~~~~~vl~~l~~~-~~iis~   86 (152)
T d2ahra2          68 QLFETVLKPLHFK-QPIISM   86 (152)
T ss_dssp             GGHHHHHTTSCCC-SCEEEC
T ss_pred             HhHHHHhhhcccc-eeEecc
Confidence            6777788888775 665544

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.48  E-value=0.035  Score=47.47  Aligned_cols=47  Identities=30%  Similarity=0.330  Sum_probs=38.8

Q ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 019414          152 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  199 (341)
Q Consensus       152 ~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~  199 (341)
                      .-+++|.+|||+|+ |-+|...+.-+...|+ .|+++.++.++.+.++.
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~   53 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQK   53 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHH
Confidence            44678999999987 9999999988888898 88888888877665543

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.45  E-value=0.071  Score=42.13  Aligned_cols=94  Identities=13%  Similarity=0.129  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce-ecCCCCCChhHHHHHHHHhcCCc
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vv~~~~~~~~~~~~i~~~~~~~~  227 (341)
                      -++++++||=+|+|. |..+..+++ .|. .|++++.+++..+.+++    .+... .+..+..+  +     ...++.+
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~--l-----~~~~~~f  103 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK--L-----SFEDKTF  103 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS--C-----CSCTTCE
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccccc--c-----cccCcCc
Confidence            357889999999865 777777876 477 89999999998877764    33221 11111111  0     0122379


Q ss_pred             cEEEeccC-----C---hHHHHHHHHHhcCCCcEEEEE
Q 019414          228 DRSVECTG-----N---IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       228 d~vld~~g-----~---~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      |+|+-...     .   ...+..+.+.|+|+ |++++.
T Consensus       104 D~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         104 DYVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            99874321     1   12577899999998 988765

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.34  Score=41.42  Aligned_cols=110  Identities=16%  Similarity=0.177  Sum_probs=71.2

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCceecCCCCC---------------
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEH---------------  211 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vv~~~~~---------------  211 (341)
                      .+...++++..|+...+|+.|.+.+..|+.+|.+-++++..  +++|.+.++.+|++.+......               
T Consensus        89 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          89 ERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            34456677777776678999999999999999954554433  5578889999999755321110               


Q ss_pred             ---------------Ch-------hHHHHHHHHhcCCccEEEeccCChHHHH---HHHHHhcCCCcEEEEEcc
Q 019414          212 ---------------DR-------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       212 ---------------~~-------~~~~~i~~~~~~~~d~vld~~g~~~~~~---~~~~~l~~~~g~~v~~g~  259 (341)
                                     +.       ....++.+..++.+|.++-++|+..++.   ..++...+. -+++.+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~vep  240 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVDP  240 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeecc
Confidence                           00       0122333333446899999999765544   445555565 67776654

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.36  E-value=0.019  Score=37.68  Aligned_cols=33  Identities=21%  Similarity=0.320  Sum_probs=29.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      +|.|+|+|-+|+|.++-++.+|+ ++++.+.++.
T Consensus         3 ~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~   35 (78)
T d3etja2           3 QVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAE   35 (78)
T ss_dssp             EEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCC
Confidence            68999999999999999999999 8888876544

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.31  E-value=0.24  Score=37.92  Aligned_cols=96  Identities=21%  Similarity=0.201  Sum_probs=58.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcC-C-hhhHHHHHHcCCceecCCCCC----------ChhHHHHHHHHhcCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR-S-SKRFEEAKKFGVTDFVNTSEH----------DRPIQEVIAEMTNGG  226 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~-~-~~~~~~~~~~g~~~vv~~~~~----------~~~~~~~i~~~~~~~  226 (341)
                      +|.|.|.|-+|+..++.+....--.++++-. + ......+...+.......+..          +..+.+..     .+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~~   77 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----KT   77 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----HH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----hc
Confidence            5889999999999999888654226777643 2 233333444443221111000          00122111     14


Q ss_pred             ccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          227 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       227 ~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +|+|+||+|.....+.+-.++..+ -++++.+..
T Consensus        78 vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~~  110 (178)
T d1b7go1          78 SDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGE  110 (178)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred             CCEEEECCCCcCCHHHHHHHHHcC-CEEEEECCC
Confidence            899999999877778888888876 788877643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.18  E-value=0.17  Score=39.48  Aligned_cols=86  Identities=20%  Similarity=0.132  Sum_probs=56.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...+++++.+|. +|++.++..+.....  .+..    ..  +  +.+.+.+     .|+++-++.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~----~~--~--l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY----VD--S--LDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB----CS--C--HHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee----ec--c--ccccccc-----cccccccCC
Confidence            47899999999999999999999999 999997665433221  1211    11  1  4443433     688876654


Q ss_pred             -ChHH----HHHHHHHhcCCCcEEEEEc
Q 019414          236 -NIDN----MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 -~~~~----~~~~~~~l~~~~g~~v~~g  258 (341)
                       ++++    -.+.++.++++ ..++-++
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~s  132 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQD-VVIVNVS  132 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECS
T ss_pred             ccccccccccHHHHhhhCCc-cEEEecC
Confidence             2221    24567788886 7777665

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.17  E-value=0.03  Score=46.47  Aligned_cols=95  Identities=21%  Similarity=0.143  Sum_probs=64.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--------e--ecCCCCCChhHHHHHHHHhcC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--------D--FVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--------~--vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ...+|||+|+|. |..+-.+++..+..+|.+++-+++=.+.++++-..        +  ++..   |  ..+.+++ +++
T Consensus        75 ~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~---D--~~~~l~~-~~~  147 (274)
T d1iy9a_          75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD---D--GFMHIAK-SEN  147 (274)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES---C--SHHHHHT-CCS
T ss_pred             CcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec---h--HHHHHhh-cCC
Confidence            457899998654 55566777777777999999999998888875311        1  1111   1  3333333 345


Q ss_pred             CccEEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          226 GVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       226 ~~d~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .+|+|+ |...         +.+-++.+.++|+++ |.++.-.
T Consensus       148 ~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~  189 (274)
T d1iy9a_         148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (274)
T ss_dssp             CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence            899986 5432         235688899999998 9988765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.15  E-value=0.087  Score=44.29  Aligned_cols=74  Identities=18%  Similarity=0.217  Sum_probs=44.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC--Chhh---HHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEE
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR--SSKR---FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  230 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~--~~~~---~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~v  230 (341)
                      .+|||+|+ |-+|...+..+...|+ .|+++++  ...+   .+.+...+--.++..+-.+   .+.+.+...+ ++|+|
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~---~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN---KNDVTRLITKYMPDSC   76 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC---HHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCC---HHHHHHHHHhcCCceE
Confidence            36999987 9999999998888898 8888853  2222   2333333221222111111   1233333334 78999


Q ss_pred             EeccC
Q 019414          231 VECTG  235 (341)
Q Consensus       231 ld~~g  235 (341)
                      |++.+
T Consensus        77 ih~aa   81 (338)
T d1orra_          77 FHLAG   81 (338)
T ss_dssp             EECCC
T ss_pred             Eeecc
Confidence            99875

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.13  E-value=0.28  Score=35.66  Aligned_cols=28  Identities=25%  Similarity=0.356  Sum_probs=20.9

Q ss_pred             EEEEECC-CHHHHHHHHHHHHc-CCCEEEEE
Q 019414          159 SVAVFGL-GAVGLAAAEGARIA-GASRIIGV  187 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~-g~~~vv~v  187 (341)
                      +|.|.|+ |-+|.+.++.+... +. .+++.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEE
Confidence            5889996 99999988877654 56 44443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.10  E-value=0.071  Score=42.23  Aligned_cols=71  Identities=21%  Similarity=0.217  Sum_probs=45.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~-~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .+|||+|+ |.+|...+..+...|.. .|+...+++++...+.. +...+ .|..+    . +.+.+.. .++|.|+++.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~~d~~~----~-~~~~~~~-~~~d~vi~~a   76 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFIGDITD----A-DSINPAF-QGIDALVILT   76 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEECCTTS----H-HHHHHHH-TTCSEEEECC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEEeeecc----c-ccccccc-ccceeeEEEE
Confidence            47999987 99999999999888863 56777788776554322 23222 22222    1 2222322 3589999886


Q ss_pred             C
Q 019414          235 G  235 (341)
Q Consensus       235 g  235 (341)
                      +
T Consensus        77 ~   77 (252)
T d2q46a1          77 S   77 (252)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.10  E-value=0.091  Score=39.49  Aligned_cols=96  Identities=23%  Similarity=0.320  Sum_probs=67.7

Q ss_pred             hhhhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCC
Q 019414          148 TLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       148 l~~~~~-~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      +.+... +-.|.+++|.|=|-+|.-.++-+|.+|+ +|++++.++-+.-.+.--|.. |..       ..+.+     +.
T Consensus        13 i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~~-------~~~a~-----~~   78 (163)
T d1v8ba1          13 LMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VVT-------LDEIV-----DK   78 (163)
T ss_dssp             HHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-ECC-------HHHHT-----TT
T ss_pred             HHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cCc-------hhHcc-----cc
Confidence            344434 4578999999999999999999999999 999999998664333322332 211       22222     24


Q ss_pred             ccEEEeccCChHH-HHHHHHHhcCCCcEEEEEc
Q 019414          227 VDRSVECTGNIDN-MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       227 ~d~vld~~g~~~~-~~~~~~~l~~~~g~~v~~g  258 (341)
                      .|+++-++|.... -...++.++++ ..+.-.|
T Consensus        79 aDi~vTaTGn~~vI~~~h~~~MKdg-aIl~N~G  110 (163)
T d1v8ba1          79 GDFFITCTGNVDVIKLEHLLKMKNN-AVVGNIG  110 (163)
T ss_dssp             CSEEEECCSSSSSBCHHHHTTCCTT-CEEEECS
T ss_pred             CcEEEEcCCCCccccHHHHHHhhCC-eEEEecc
Confidence            7999999998664 44678888886 6666666

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.10  E-value=0.016  Score=48.60  Aligned_cols=100  Identities=17%  Similarity=0.118  Sum_probs=62.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCcee-c--CCCCCChhHHHHHHHHhc
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDF-V--NTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~v-v--~~~~~~~~~~~~i~~~~~  224 (341)
                      .+.+++.+||=+|+|. |..++.+|+. |+ .|++++.+++.++.+++.    +.... .  +..+.+  +...-.....
T Consensus        52 l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  126 (292)
T d1xvaa_          52 LRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN--WLTLDKDVPA  126 (292)
T ss_dssp             HHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC--GGGHHHHSCC
T ss_pred             hhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeecc--ccccccccCC
Confidence            3445678899888764 7777888775 88 899999999988877652    22110 0  000111  2111122222


Q ss_pred             -CCccEEEeccCC--------------hHHHHHHHHHhcCCCcEEEEE
Q 019414          225 -GGVDRSVECTGN--------------IDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       225 -~~~d~vld~~g~--------------~~~~~~~~~~l~~~~g~~v~~  257 (341)
                       +.+|.|+.....              ...++.+.+.|+|+ |.+++-
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~  173 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVID  173 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEEe
Confidence             379998853221              12688999999998 988763

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.07  E-value=0.064  Score=38.18  Aligned_cols=42  Identities=21%  Similarity=0.196  Sum_probs=35.5

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .+.....++.+|+|+|+|.+|+=+++.++.+|. .|..+.+++
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            344567788999999999999999999999998 888887654

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.07  E-value=0.025  Score=48.02  Aligned_cols=93  Identities=19%  Similarity=0.226  Sum_probs=53.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHH---HHHHcCCce---ecCCCCCChhHHHHHHHHhcCC
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVTD---FVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~---~~~~~g~~~---vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      .+.+|++||-+|+|. |.+++.+|+ .|+++|++++.++....   ..+..+...   ++.....+  +     ....+.
T Consensus        30 ~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~--~-----~~~~~~  100 (316)
T d1oria_          30 HLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE--V-----ELPVEK  100 (316)
T ss_dssp             HHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT--C-----CCSSSC
T ss_pred             ccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHH--c-----ccccce
Confidence            455899999998864 666666665 68879999998764322   223334322   22111111  0     111237


Q ss_pred             ccEEEe-ccCC--------hHHHHHHHHHhcCCCcEEE
Q 019414          227 VDRSVE-CTGN--------IDNMISAFECVHDGWGVAV  255 (341)
Q Consensus       227 ~d~vld-~~g~--------~~~~~~~~~~l~~~~g~~v  255 (341)
                      +|+|+- ..+.        +..+....+.|+|+ |+++
T Consensus       101 ~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_         101 VDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             EEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             eEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            899864 2221        23445566789997 8764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.06  E-value=0.26  Score=36.47  Aligned_cols=96  Identities=14%  Similarity=0.195  Sum_probs=60.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHc--CCCEEEEEcCChh--h-HHHHHHcCCceecCCCCCChh---------------HH
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSK--R-FEEAKKFGVTDFVNTSEHDRP---------------IQ  216 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~--g~~~vv~v~~~~~--~-~~~~~~~g~~~vv~~~~~~~~---------------~~  216 (341)
                      .+|.|+|+ |.+|.-++.+.+..  .+ +|++......  + .+.++++.+..++..++....               -.
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            57999997 99999999999876  35 6666654432  2 334667888776544332100               11


Q ss_pred             HHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEE
Q 019414          217 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV  255 (341)
Q Consensus       217 ~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v  255 (341)
                      +.+.+.....+|+++.++.+...+.-.+..+..+ -++.
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g-k~ia  119 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG-KTVA  119 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT-SEEE
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcC-CEEE
Confidence            1122222235788888876667788888888874 4443

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.00  E-value=0.24  Score=37.80  Aligned_cols=136  Identities=16%  Similarity=0.126  Sum_probs=77.0

Q ss_pred             EEEEECCCHHHHH-HHHHHHHcCCC-EEE-EEcCChhhHHH-HHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          159 SVAVFGLGAVGLA-AAEGARIAGAS-RII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       159 ~vlI~G~g~~G~~-a~~la~~~g~~-~vv-~v~~~~~~~~~-~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      +|.|+|+|..|.- .+...+..+-. .++ ++++++++.+. .++++...+++.      +.+.+.   ...+|+|+-|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~------~~ell~---~~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDS------YEELLE---SGLVDAVDLTL   75 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESC------HHHHHH---SSCCSEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeee------eecccc---ccccceeeccc
Confidence            5789999999964 46666654321 455 55666766554 556776555421      433322   23699999998


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEccCCCCcccccccc-ee--eecceEEEeeecCCC-CCCCHHHHHHHHHCCCC
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NV--LNERTLKGTFFGNYK-PRTDLPSVVDMYMNKQL  305 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~--~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~i  305 (341)
                      ......+.+..++..  |+-+++.-+........... ..  .++..+.-.....+. ....++++.+++.+|++
T Consensus        76 p~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          76 PVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             ccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            876778888888876  67777764322211111111 01  123333222111111 11346788889999876

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=93.99  E-value=0.058  Score=43.85  Aligned_cols=76  Identities=25%  Similarity=0.284  Sum_probs=47.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH----HHcCCce---ecCCCCCCh--hHHHHHHHHhcCCc
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD---FVNTSEHDR--PIQEVIAEMTNGGV  227 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v-~~~~~~~~~~----~~~g~~~---vv~~~~~~~--~~~~~i~~~~~~~~  227 (341)
                      .+||+|+ +++|++.++.+...|+ +|+.. .+++++.+.+    ++.|...   ..|..+.+.  .+.+.+.+.. +++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   80 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI   80 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            4577786 9999999999999999 66664 5566555433    4455432   234433221  1223333332 479


Q ss_pred             cEEEeccCC
Q 019414          228 DRSVECTGN  236 (341)
Q Consensus       228 d~vld~~g~  236 (341)
                      |+++++.|.
T Consensus        81 DiLVnnAg~   89 (244)
T d1edoa_          81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             Ccccccccc
Confidence            999998874

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.96  E-value=0.034  Score=45.22  Aligned_cols=35  Identities=34%  Similarity=0.305  Sum_probs=31.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ..++|+|+|+|..|++++..++..|+ +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            35789999999999999999999999 999998754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.93  E-value=0.01  Score=46.69  Aligned_cols=91  Identities=15%  Similarity=0.226  Sum_probs=60.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCcee----cCCCCCChhHHHHHHHHhcC
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF----VNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v----v~~~~~~~~~~~~i~~~~~~  225 (341)
                      +++ .+||=+|+| .|..+..+++ .|+ +|++++.+++..+.+++    .+.+.+    .|..+..          .++
T Consensus        29 ~~~-grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~----------~~~   94 (198)
T d2i6ga1          29 VAP-GRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT----------FDG   94 (198)
T ss_dssp             SCS-CEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC----------CCC
T ss_pred             CCC-CcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccccc----------ccc
Confidence            344 489999987 5777777776 588 99999999998886654    444421    1221111          124


Q ss_pred             CccEEEeccC-----C---hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          226 GVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       226 ~~d~vld~~g-----~---~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .||+|+...-     .   ...++.+.++|+|+ |.+++...
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1          95 EYDFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             CEEEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             cccEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            7999885221     1   23677888889998 98887654

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.90  E-value=0.18  Score=37.98  Aligned_cols=88  Identities=16%  Similarity=0.188  Sum_probs=59.5

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCEEEEEcCChhhHHHH-HHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~-a~~la~~~-g~~~vv~v~~~~~~~~~~-~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|+|..|.- .+...+.. +. .+++++.++++.+.+ ++++...+++  +    +.+    +....+|+|+-|+.
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~--~----~~~----ll~~~iD~V~I~tp   71 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCT--D----YRD----VLQYGVDAVMIHAA   71 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCS--S----TTG----GGGGCCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccc--c----HHH----hcccccceeccccc
Confidence            5889999999964 45556555 45 677888888776654 5577654432  1    111    11235899999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .....+.+..++..  |+-+++.-
T Consensus        72 ~~~H~~~~~~al~~--gk~V~~EK   93 (167)
T d1xeaa1          72 TDVHSTLAAFFLHL--GIPTFVDK   93 (167)
T ss_dssp             GGGHHHHHHHHHHT--TCCEEEES
T ss_pred             cccccccccccccc--ccccccCC
Confidence            87788888888886  55567754

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=93.78  E-value=0.11  Score=42.41  Aligned_cols=79  Identities=15%  Similarity=0.277  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhhH-HHH-HHcCCce---ecCCCCCC--hhHHHHHHHHhcC
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRF-EEA-KKFGVTD---FVNTSEHD--RPIQEVIAEMTNG  225 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~~-~~~-~~~g~~~---vv~~~~~~--~~~~~~i~~~~~~  225 (341)
                      .|.++||+|+ |  ++|.+.++-+...|+ +|+.+.+++++. +.+ ++++...   ..|..+.+  ..+.+.+.+....
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            5788999984 3  699999988899999 788888877764 333 3455422   23333221  1244445444433


Q ss_pred             --CccEEEeccC
Q 019414          226 --GVDRSVECTG  235 (341)
Q Consensus       226 --~~d~vld~~g  235 (341)
                        .+|+++++.|
T Consensus        84 ~~~ld~~i~~ag   95 (268)
T d2h7ma1          84 GNKLDGVVHSIG   95 (268)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCcceeeeccc
Confidence              6899998877

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.75  E-value=0.01  Score=45.12  Aligned_cols=87  Identities=13%  Similarity=0.104  Sum_probs=52.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-----ecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-----FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-----vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+..+..+...     .+..  .   ..+.+     +.+|++|-+
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~-----~~~D~iii~   70 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTA--N---DPDFL-----ATSDLLLVT   70 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEE--S---CHHHH-----HTCSEEEEC
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCcccccccccc--c---hhhhh-----cccceEEEe
Confidence            58999999999998888888898 9999988876554333222211     1101  1   11111     258999999


Q ss_pred             cCChHH---HHHHHHHhcCCCcEEEEE
Q 019414          234 TGNIDN---MISAFECVHDGWGVAVLV  257 (341)
Q Consensus       234 ~g~~~~---~~~~~~~l~~~~g~~v~~  257 (341)
                      +-....   ++.+...+.++ ..++.+
T Consensus        71 vka~~~~~~~~~l~~~~~~~-~~Iv~~   96 (167)
T d1ks9a2          71 LKAWQVSDAVKSLASTLPVT-TPILLI   96 (167)
T ss_dssp             SCGGGHHHHHHHHHTTSCTT-SCEEEE
T ss_pred             ecccchHHHHHhhccccCcc-cEEeec
Confidence            876332   23333344454 556555

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=93.70  E-value=0.46  Score=39.17  Aligned_cols=110  Identities=16%  Similarity=0.123  Sum_probs=69.2

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCceecCCCCCC--------------
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEHD--------------  212 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vv~~~~~~--------------  212 (341)
                      .+.....++.+|+...+|+.|++++..++.+|.+-++.+..  ++.|.+.++.+|++.++...+.+              
T Consensus        52 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          52 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            34455666776666678999999999999999854444432  66788899999997543222210              


Q ss_pred             ------------h-------hHHHHHHHHhcCCccEEEeccCChHHHH---HHHHHhcCCCcEEEEEcc
Q 019414          213 ------------R-------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       213 ------------~-------~~~~~i~~~~~~~~d~vld~~g~~~~~~---~~~~~l~~~~g~~v~~g~  259 (341)
                                  .       ....++.+..++.+|.++-++|+..++.   ..++...+. .+++.+..
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~Vep  199 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGLQP  199 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEecc
Confidence                        0       0122233333446899999888765544   444445565 66666643

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.65  E-value=0.083  Score=42.05  Aligned_cols=97  Identities=22%  Similarity=0.218  Sum_probs=61.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEEcCChhhHHHHHHc----CCceecCCCCCChhHHHHHHHHhcCC
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARI---AGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~---~g~~~vv~v~~~~~~~~~~~~~----g~~~vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      ++++.+||=+|+|. |..+..+++.   .++ +|++++.+++..+.+++.    +....+.....+      ........
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d------~~~~~~~~  108 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCND------IRHVEIKN  108 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSC------TTTCCCCS
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccch------hhcccccc
Confidence            67899999999753 6666677764   466 999999999998888752    322111111111      01122235


Q ss_pred             ccEEEeccC----C----hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          227 VDRSVECTG----N----IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       227 ~d~vld~~g----~----~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +|+++-...    .    ...++++.+.|+|+ |.+++...
T Consensus       109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~~  148 (225)
T d1im8a_         109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSEK  148 (225)
T ss_dssp             EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             ceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeecccc
Confidence            666553221    1    24688999999998 99988753

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.65  E-value=0.15  Score=41.52  Aligned_cols=34  Identities=21%  Similarity=0.215  Sum_probs=28.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  193 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~  193 (341)
                      ..||+|+ +++|.+.+..+...|+ +|+.++++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            3577887 8999999999999999 88888887654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.64  E-value=0.076  Score=41.39  Aligned_cols=40  Identities=28%  Similarity=0.412  Sum_probs=34.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  198 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~  198 (341)
                      .+|.|+|+|.+|...++++...|+ .|+..+.+++..+.++
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHHH
Confidence            479999999999999999999999 9999999998766543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.59  E-value=0.13  Score=37.14  Aligned_cols=30  Identities=20%  Similarity=0.334  Sum_probs=24.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVD  188 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~  188 (341)
                      +|.|+|+ |-+|++..+++...+...+..++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id   32 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVD   32 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEEC
Confidence            5889997 99999999999988884444443

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.59  E-value=0.036  Score=41.37  Aligned_cols=85  Identities=12%  Similarity=-0.050  Sum_probs=51.9

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChHH
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  239 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~  239 (341)
                      |-++|+|.+|.+.+..++..+. .+.+..|+.++.+.+.+.+.....+..+.-            ...|+||-|+.. ..
T Consensus         2 IgfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~------------~~~DiVil~v~d-~~   67 (153)
T d2i76a2           2 LNFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEKHP------------ELNGVVFVIVPD-RY   67 (153)
T ss_dssp             CEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCC------------C---CEEECSCT-TT
T ss_pred             EEEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhhhh------------ccCcEEEEeccc-hh
Confidence            3467999999998876655333 445678899998887776654333322211            247899999865 67


Q ss_pred             HHHHHHHhcCCCcEEEEEc
Q 019414          240 MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       240 ~~~~~~~l~~~~g~~v~~g  258 (341)
                      ++.....+...+..++.+.
T Consensus        68 i~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          68 IKTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHHHTTTCCSSCCEEECC
T ss_pred             hhHHHhhhcccceeeeecc
Confidence            7777777765414445554

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.59  E-value=0.41  Score=31.92  Aligned_cols=65  Identities=22%  Similarity=0.352  Sum_probs=46.5

Q ss_pred             EEEEECCCHHHHHH-HHHHHHcCCCEEEEEcCCh-hhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~a-~~la~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|-++|-|++|+.+ +++++..|+ .|.+.|..+ +..+.++++|+.....++..+  +         .+.|.|+-+..
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~--i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSADN--W---------YDPDLVIKTPA   69 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCTTS--C---------CCCSEEEECTT
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecccc--c---------CCCCEEEEecC
Confidence            56677988889865 788899999 999999876 446678999987544333222  1         25788876654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.58  E-value=0.046  Score=42.22  Aligned_cols=37  Identities=32%  Similarity=0.386  Sum_probs=32.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ...+.+|+|+|+|+.|+.++..+...|+ +|+..++++
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            4456789999999999999999999999 999998765

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.52  E-value=0.074  Score=42.42  Aligned_cols=103  Identities=14%  Similarity=0.160  Sum_probs=65.7

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH----
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM----  222 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~----  222 (341)
                      .+.....+||=+|++ .|..++.+|+.+. -.++++++.+++..+.+++    .|....+.....+  ..+.+.+.    
T Consensus        55 ~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gd--a~e~l~~~~~~~  131 (219)
T d2avda1          55 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP--ALETLDELLAAG  131 (219)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTT
T ss_pred             HHccCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEee--hhhcchhhhhhc
Confidence            344556789999974 3677788887653 2399999999988766654    4654333222233  44444333    


Q ss_pred             hcCCccEEE-ecc--CChHHHHHHHHHhcCCCcEEEEEc
Q 019414          223 TNGGVDRSV-ECT--GNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       223 ~~~~~d~vl-d~~--g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ..+.||.|| |+-  .....++.+++.|+++ |.++.=+
T Consensus       132 ~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn  169 (219)
T d2avda1         132 EAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR  169 (219)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeC
Confidence            233799997 432  1234678999999997 8877643

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=93.47  E-value=0.24  Score=33.63  Aligned_cols=72  Identities=19%  Similarity=0.290  Sum_probs=50.2

Q ss_pred             CCCCCCEEEEECCCHHHHHH-HHHHHHcCCCEEEEEcCCh-hhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEE
Q 019414          153 KPERGSSVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a-~~la~~~g~~~vv~v~~~~-~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      ..+...+|.++|-|++|+.+ +++++..|+ .|.+.|... ...+.+++.|+.....+...+         .  .+.|.|
T Consensus         4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~---------i--~~~d~v   71 (96)
T d1p3da1           4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAEEH---------I--EGASVV   71 (96)
T ss_dssp             CCTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCGGG---------G--TTCSEE
T ss_pred             cchhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcccc---------C--CCCCEE
Confidence            34566789999988889776 899999999 999998763 445667778886444332211         0  257888


Q ss_pred             EeccCC
Q 019414          231 VECTGN  236 (341)
Q Consensus       231 ld~~g~  236 (341)
                      +-..+-
T Consensus        72 V~S~AI   77 (96)
T d1p3da1          72 VVSSAI   77 (96)
T ss_dssp             EECTTS
T ss_pred             EECCCc
Confidence            765543

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.33  E-value=0.19  Score=35.76  Aligned_cols=38  Identities=29%  Similarity=0.413  Sum_probs=32.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      ++++.+++|+|+|.+|.=++..++.+|. +|..+++++.
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            4567899999999999999999999998 8888877653

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=93.30  E-value=0.1  Score=42.18  Aligned_cols=77  Identities=19%  Similarity=0.206  Sum_probs=49.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCC------EEEEEcCChhhHHHH----HHcCCce---ecCCCCCCh--hHHHHHHHH
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGAS------RIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDR--PIQEVIAEM  222 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~------~vv~v~~~~~~~~~~----~~~g~~~---vv~~~~~~~--~~~~~i~~~  222 (341)
                      .|||+|+ +++|++.+..+...|++      .|+.+++++++.+.+    ++.|...   ..|-.+.+.  .+.+.+.+.
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3688887 89999998888888884      388888998886644    3345432   234443321  122233332


Q ss_pred             hcCCccEEEeccCC
Q 019414          223 TNGGVDRSVECTGN  236 (341)
Q Consensus       223 ~~~~~d~vld~~g~  236 (341)
                      . +++|+++++.|.
T Consensus        83 ~-g~iDilvnnAg~   95 (240)
T d2bd0a1          83 Y-GHIDCLVNNAGV   95 (240)
T ss_dssp             T-SCCSEEEECCCC
T ss_pred             c-CCcceeeccccc
Confidence            2 379999998874

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.25  E-value=0.23  Score=35.38  Aligned_cols=40  Identities=28%  Similarity=0.355  Sum_probs=33.1

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          151 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ...-.++.+|+|+|+|.+|+-+++.+..+|. +|..+++.+
T Consensus        24 ~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          24 KTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            3344567899999999999999999999999 888887654

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.24  E-value=0.047  Score=46.63  Aligned_cols=37  Identities=24%  Similarity=0.215  Sum_probs=32.4

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  193 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~  193 (341)
                      ++.+|||+|+ |-+|...++.+...|+ .|++++++..+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~   44 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPT   44 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCc
Confidence            4689999987 9999999999999999 89999887654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.21  E-value=0.82  Score=33.48  Aligned_cols=95  Identities=8%  Similarity=0.062  Sum_probs=57.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHHH---cCCceecCCCCCChhHHHHHHHHhcCCccEEEe
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-EEAKK---FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  232 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~-~~~~~---~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld  232 (341)
                      -++|+|.|.|.+|...++.+...|. .+++++.++++. +.+++   .|...+. -+..+   .+.+++..-+..+.++-
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~-Gd~~d---~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GDSND---SSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SCTTS---HHHHHHHTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEE-ccCcc---hHHHHHhccccCCEEEE
Confidence            4679999999999999999999998 777787776542 23332   3554332 22222   22334433347899998


Q ss_pred             ccCChHH---HHHHHHHhcCCCcEEEEE
Q 019414          233 CTGNIDN---MISAFECVHDGWGVAVLV  257 (341)
Q Consensus       233 ~~g~~~~---~~~~~~~l~~~~g~~v~~  257 (341)
                      +++....   .....+.+.+. -+++..
T Consensus        78 ~~~~d~~n~~~~~~~r~~~~~-~~iia~  104 (153)
T d1id1a_          78 LSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             ccccHHHHHHHHHHHHHhCCC-CceEEE
Confidence            8876432   22333445554 444444

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=92.96  E-value=0.17  Score=42.56  Aligned_cols=97  Identities=18%  Similarity=0.193  Sum_probs=62.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc---eecCC-----CCCChhHHHHHHHHhcCCc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT---DFVNT-----SEHDRPIQEVIAEMTNGGV  227 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~---~vv~~-----~~~~~~~~~~i~~~~~~~~  227 (341)
                      ...+|||+|+|. |..+-.+++.....+|.+++.+++=.+.+++.-..   ...+.     .-.|  ..+-+++ +++.+
T Consensus        77 ~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~D--a~~~l~~-~~~~y  152 (312)
T d1uira_          77 EPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDD--ARAYLER-TEERY  152 (312)
T ss_dssp             CCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESC--HHHHHHH-CCCCE
T ss_pred             CcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEch--HHHHhhh-cCCcc
Confidence            347899998753 55566677776666999999999988888764210   01000     0112  4444443 44589


Q ss_pred             cEEE-ec---cC---------ChHHHHHHHHHhcCCCcEEEEE
Q 019414          228 DRSV-EC---TG---------NIDNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       228 d~vl-d~---~g---------~~~~~~~~~~~l~~~~g~~v~~  257 (341)
                      |+|| |.   .+         +.+-++.+.++|+++ |.++.-
T Consensus       153 DvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~  194 (312)
T d1uira_         153 DVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQ  194 (312)
T ss_dssp             EEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEE
T ss_pred             cEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEe
Confidence            9986 54   22         124567888999998 988764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.96  E-value=0.14  Score=39.70  Aligned_cols=82  Identities=13%  Similarity=0.099  Sum_probs=53.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceec----CCCCC---ChhHHHHHHHHhcCCccEEE
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV----NTSEH---DRPIQEVIAEMTNGGVDRSV  231 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv----~~~~~---~~~~~~~i~~~~~~~~d~vl  231 (341)
                      +|.|+|+|..|.+.+.++...|. .|....++++..+.+.+-+-....    ...+.   ..++.+.+     ...|++|
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~-----~~ad~ii   82 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY-----NGAEIIL   82 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH-----TTCSCEE
T ss_pred             eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc-----CCCCEEE
Confidence            59999999999999888887887 899999999988877654321110    00000   00133332     2479999


Q ss_pred             eccCChHHHHHHHHHh
Q 019414          232 ECTGNIDNMISAFECV  247 (341)
Q Consensus       232 d~~g~~~~~~~~~~~l  247 (341)
                      -++.+ ..++..++.+
T Consensus        83 iavPs-~~~~~~~~~~   97 (189)
T d1n1ea2          83 FVIPT-QFLRGFFEKS   97 (189)
T ss_dssp             ECSCH-HHHHHHHHHH
T ss_pred             EcCcH-HHHHHHHHHH
Confidence            99866 5555555444

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.94  E-value=0.048  Score=44.96  Aligned_cols=34  Identities=35%  Similarity=0.473  Sum_probs=30.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      +.+|+|+|+|..|++++..++..|+ +|+++++++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            4689999999999999999999999 999998753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.78  E-value=0.088  Score=40.39  Aligned_cols=39  Identities=26%  Similarity=0.325  Sum_probs=33.0

Q ss_pred             EEEEE-CCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH
Q 019414          159 SVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  198 (341)
Q Consensus       159 ~vlI~-G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~  198 (341)
                      +|.|+ |+|++|.+.++.+...|+ +|+...|++++.+.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l~   41 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence            47888 569999999999999999 8888899998866543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.78  E-value=0.27  Score=36.35  Aligned_cols=40  Identities=18%  Similarity=0.236  Sum_probs=31.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  199 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~  199 (341)
                      +|.|+|.|.+|++.+.-++..|+ .|++..++.++....+.
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~   41 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERA   41 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhh
Confidence            57889999999999998888998 78888776655554443

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.71  E-value=0.34  Score=36.92  Aligned_cols=91  Identities=14%  Similarity=0.174  Sum_probs=60.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEE-EcCChhhHHH-HHHcCCceec-CCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          159 SVAVFGLGAVGLAAAEGARIA-GASRIIG-VDRSSKRFEE-AKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~-g~~~vv~-v~~~~~~~~~-~~~~g~~~vv-~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      +|.|+|+|.+|...++.++.. +. .+++ .++++++.+. .++++..... .+++    +.+.+.   ...+|+|+-++
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~ll~---~~~iD~v~I~t   74 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIHGS----YESLLE---DPEIDALYVPL   74 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEESS----HHHHHH---CTTCCEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeecCc----HHHhhh---ccccceeeecc
Confidence            578999999998888777766 55 5554 4667766444 4556653210 1111    333222   23699999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          235 GNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       235 g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ......+.+..++..  |+-+++.-
T Consensus        75 p~~~h~~~~~~~l~~--g~~v~~EK   97 (184)
T d1ydwa1          75 PTSLHVEWAIKAAEK--GKHILLEK   97 (184)
T ss_dssp             CGGGHHHHHHHHHTT--TCEEEECS
T ss_pred             cchhhcchhhhhhhc--cceeeccc
Confidence            887888888888886  56777764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.67  E-value=0.17  Score=40.79  Aligned_cols=35  Identities=31%  Similarity=0.430  Sum_probs=31.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ..+|+|+|+|++|..+++.+-..|.+++..+|.+.
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            46899999999999999999999999999988643

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.65  E-value=0.056  Score=44.30  Aligned_cols=32  Identities=16%  Similarity=0.278  Sum_probs=28.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      +|||+|+ |-+|...+..++..|+ .|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            5899987 9999999999999999 899997653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.64  E-value=0.11  Score=41.59  Aligned_cols=48  Identities=27%  Similarity=0.334  Sum_probs=40.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT  203 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~  203 (341)
                      -.|.+|+|.|-|.+|..+++++...|+ ++++++.+..+.+.+.. .|..
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            468899999999999999999999999 99999988888765544 5554

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.58  E-value=0.16  Score=42.14  Aligned_cols=98  Identities=14%  Similarity=0.138  Sum_probs=62.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eec-CCC----CCChhHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFV-NTS----EHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~vv-~~~----~~~~~~~~~i~~~~~~~~d  228 (341)
                      ..++|||+|+|. |..+-.+++..+..+|++++-+++=.+.++++-..  ... +++    -.|  ..+-+++ +.+.+|
T Consensus        78 ~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~D--a~~~l~~-~~~~yD  153 (285)
T d2o07a1          78 NPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGD--GFEFMKQ-NQDAFD  153 (285)
T ss_dssp             SCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC--HHHHHHT-CSSCEE
T ss_pred             CcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEcc--HHHHHhc-CCCCCC
Confidence            347899997654 45556677777777999999999999988875311  001 000    012  3344433 445899


Q ss_pred             EEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEc
Q 019414          229 RSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       229 ~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|+ |...         +.+-++.+-+.|+++ |.++.-.
T Consensus       154 vIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  192 (285)
T d2o07a1         154 VIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  192 (285)
T ss_dssp             EEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEec
Confidence            987 5432         124577788899998 9888764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.56  E-value=0.32  Score=36.90  Aligned_cols=42  Identities=29%  Similarity=0.344  Sum_probs=37.2

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  202 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~  202 (341)
                      |-|+|.|.+|...+.-+...|+ .|++.++++++.+.+.+.++
T Consensus         4 IGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           4 VGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            7789999999999888888899 89999999999988876655

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.52  E-value=0.046  Score=42.68  Aligned_cols=101  Identities=12%  Similarity=0.137  Sum_probs=61.4

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce-ecCCCCCChhHHHHHHHH
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vv~~~~~~~~~~~~i~~~  222 (341)
                      |.+.....++++||=+|+|. |..++.+++ .+. .|++++.+++..+.+++    .+... -+.....+  +.   ...
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d--~~---~~~  115 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD--LY---ENV  115 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS--TT---TTC
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcc--hh---hhh
Confidence            45667888999999998653 455556665 344 89999999988887764    33321 01110011  10   112


Q ss_pred             hcCCccEEEecc---CCh----HHHHHHHHHhcCCCcEEEEE
Q 019414          223 TNGGVDRSVECT---GNI----DNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       223 ~~~~~d~vld~~---g~~----~~~~~~~~~l~~~~g~~v~~  257 (341)
                      .++.||+|+-..   ...    ..++.+.+.|+|+ |++++.
T Consensus       116 ~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         116 KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence            234799988421   122    2467788999998 987653

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.49  E-value=0.22  Score=41.88  Aligned_cols=100  Identities=13%  Similarity=0.092  Sum_probs=63.1

Q ss_pred             cCCCCCCEEEEEC--CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc--eecCCCCCChhHHHHHHHHh
Q 019414          152 AKPERGSSVAVFG--LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--DFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       152 ~~~~~g~~vlI~G--~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~--~vv~~~~~~~~~~~~i~~~~  223 (341)
                      ..+.+|++||=..  .|+.++++    ...|+..|++++.+++..+.+++    .|.+  .+ .....+  ..+.++...
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~a----a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~-~~i~~d--~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVAA----AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANH-QLVVMD--VFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHHH----HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTE-EEEESC--HHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHHH----HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcce-EEEEcc--HHHHHHHHH
Confidence            4577899999874  36666432    34688899999999998888765    2321  11 111122  434444332


Q ss_pred             --cCCccEEE-eccCC--------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 --NGGVDRSV-ECTGN--------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 --~~~~d~vl-d~~g~--------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                        ++.||+|| |.-..              .+.+..++++++|+ |.++.+..
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~sc  264 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTN  264 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeC
Confidence              23799986 53211              23677788999997 99888764

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.34  E-value=0.45  Score=39.67  Aligned_cols=99  Identities=18%  Similarity=0.155  Sum_probs=65.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCceecCCCCC----------------
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEH----------------  211 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vv~~~~~----------------  211 (341)
                      +...+.++..|+...+|+-|++++..++.+|.+-++++..  +..|.+.++.+|+..+......                
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~  133 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD  133 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence            3445677777666677999999999999999975555544  4567778888998765321110                


Q ss_pred             -----------Ch--------hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhc
Q 019414          212 -----------DR--------PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH  248 (341)
Q Consensus       212 -----------~~--------~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~  248 (341)
                                 +.        ....++.+..++.+|.++-++|+...+.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                       00        02233444445578999999988666665555553

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.19  E-value=0.12  Score=36.50  Aligned_cols=35  Identities=17%  Similarity=0.306  Sum_probs=30.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      ..+++|+|+|.+|+=+++.+..+|. +|..+.+.+.
T Consensus        22 p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence            4789999999999999999999998 8888876653

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=92.17  E-value=0.25  Score=40.38  Aligned_cols=96  Identities=17%  Similarity=0.138  Sum_probs=65.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCcee-cCCCCCChhHHHHHHHHhcCCccEE
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~v  230 (341)
                      ...++.+||=+|+|. |..+..+++.. +. .+++++.+++..+.+++...... +..+..+  +     .+.++.||+|
T Consensus        81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~--l-----~~~~~sfD~v  151 (268)
T d1p91a_          81 LDDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHR--L-----PFSDTSMDAI  151 (268)
T ss_dssp             SCTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTS--C-----SBCTTCEEEE
T ss_pred             cCCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeehhh--c-----cCCCCCEEEE
Confidence            346778899888764 66677777766 45 99999999999988877543221 1111111  0     1122369999


Q ss_pred             EeccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          231 VECTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       231 ld~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +... .+..++++.+.|+|+ |.++....
T Consensus       152 ~~~~-~~~~~~e~~rvLkpg-G~l~~~~p  178 (268)
T d1p91a_         152 IRIY-APCKAEELARVVKPG-GWVITATP  178 (268)
T ss_dssp             EEES-CCCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             eecC-CHHHHHHHHHHhCCC-cEEEEEee
Confidence            8654 446788999999998 99988753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.15  E-value=0.22  Score=42.10  Aligned_cols=71  Identities=17%  Similarity=0.207  Sum_probs=43.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC----ChhhHHHHHH---cCCcee-cCCCCCChhHHHHHHHHhcC-Ccc
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR----SSKRFEEAKK---FGVTDF-VNTSEHDRPIQEVIAEMTNG-GVD  228 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~----~~~~~~~~~~---~g~~~v-v~~~~~~~~~~~~i~~~~~~-~~d  228 (341)
                      +|||+|+ |-+|...+..+...|+ .|+++++    ........+.   -++..+ .|..+.     +.+.+.... ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-----~~l~~~~~~~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE-----ALMTEILHDHAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCH-----HHHHHHHHHTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCH-----HHHHHHHhccCCC
Confidence            5899987 9999999999999998 8888864    2222222222   233322 233221     233333333 799


Q ss_pred             EEEeccC
Q 019414          229 RSVECTG  235 (341)
Q Consensus       229 ~vld~~g  235 (341)
                      +||++.+
T Consensus        76 ~ViHlAa   82 (338)
T d1udca_          76 TVIHFAG   82 (338)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            9999864

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.11  E-value=0.11  Score=43.46  Aligned_cols=98  Identities=14%  Similarity=0.142  Sum_probs=62.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--ec-CCC----CCChhHHHHHHHHhcCCccE
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FV-NTS----EHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--vv-~~~----~~~~~~~~~i~~~~~~~~d~  229 (341)
                      ..+|||+|+|. |..+-.+++..+..+|.+++.+++=.+.++++-...  .+ |.+    -.|  ..+-+++ +++.+|+
T Consensus        90 pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~D--a~~~l~~-~~~~yDv  165 (295)
T d1inla_          90 PKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIAN--GAEYVRK-FKNEFDV  165 (295)
T ss_dssp             CCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC--HHHHGGG-CSSCEEE
T ss_pred             CceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhh--HHHHHhc-CCCCCCE
Confidence            47899997643 445667777777779999999999999888743210  00 000    012  3334433 3448999


Q ss_pred             EE-eccC----------ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          230 SV-ECTG----------NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       230 vl-d~~g----------~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      || |+..          +.+-++.+.++|+++ |.++.-..
T Consensus       166 Ii~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         166 IIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             EEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            87 5422          234577899999998 99887653

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=91.95  E-value=0.29  Score=40.98  Aligned_cols=99  Identities=14%  Similarity=0.100  Sum_probs=63.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eecCCC-----CCChhHHHHHHHHhcCCcc
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVNTS-----EHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~vv~~~-----~~~~~~~~~i~~~~~~~~d  228 (341)
                      ...+|||+|+|. |..+-.+++.....+|.+++.+++=.+.++++-..  ..++..     -.|  ..+.+++ +.+.+|
T Consensus       106 ~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~D--a~~~l~~-~~~~yD  181 (312)
T d2b2ca1         106 DPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD--GFEFLKN-HKNEFD  181 (312)
T ss_dssp             SCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC--HHHHHHH-CTTCEE
T ss_pred             CCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEch--HHHHHHh-CCCCCC
Confidence            346899998754 44555777777777999999999999999885321  111100     112  4445544 445899


Q ss_pred             EEE-eccC---------ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          229 RSV-ECTG---------NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       229 ~vl-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +|| |...         +.+-++.+.++|+++ |.++.-..
T Consensus       182 vII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         182 VIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             EEEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             EEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            987 4321         123467788899998 99888753

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.91  E-value=0.11  Score=41.58  Aligned_cols=37  Identities=24%  Similarity=0.257  Sum_probs=32.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .+.+.+|+|+|+|..|+.++..++..|+ .|..++.++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            3467889999999999999999999999 899988765

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.89  E-value=0.14  Score=36.22  Aligned_cols=38  Identities=11%  Similarity=0.175  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .++...+|+|+|+|.+|.=.+..+..+|. +|..+.+++
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            34445789999999999999999999998 899887654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.89  E-value=0.087  Score=44.74  Aligned_cols=93  Identities=24%  Similarity=0.307  Sum_probs=51.9

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCce---ecCCCCCChhHHHHHHHHhc
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD---FVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~---vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ....+|.+||-+|+|. |.+++.+|+ .|+++|++++.++ ..+.    .++.+...   ++..+..+  +     .+.+
T Consensus        34 ~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~--l-----~~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLED--V-----HLPF  103 (328)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT--S-----CCSS
T ss_pred             cccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhh--c-----cCcc
Confidence            3456789999998763 555554444 6888999999885 3333    33444322   22111111  1     1122


Q ss_pred             CCccEEEe-ccC----C----hHHHHHHHHHhcCCCcEEE
Q 019414          225 GGVDRSVE-CTG----N----IDNMISAFECVHDGWGVAV  255 (341)
Q Consensus       225 ~~~d~vld-~~g----~----~~~~~~~~~~l~~~~g~~v  255 (341)
                      +.+|+|+- ..+    .    ...+....+.|+|+ |+++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            47999874 222    1    12344445788997 8764

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.86  E-value=0.71  Score=34.02  Aligned_cols=91  Identities=15%  Similarity=0.306  Sum_probs=58.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcC--CCEEEEEcCCh--hh-HHHHHHcCCceecCCCCCCh-hHH---------------
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSS--KR-FEEAKKFGVTDFVNTSEHDR-PIQ---------------  216 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g--~~~vv~v~~~~--~~-~~~~~~~g~~~vv~~~~~~~-~~~---------------  216 (341)
                      +|.|+|+ |.+|.-++.+.+...  + +|++.....  +. .+.++++.+..++..++... .+.               
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            6889997 999999999999773  5 666554433  22 23456688877654432210 011               


Q ss_pred             -HHHHHHhcC-CccEEEeccCChHHHHHHHHHhcCC
Q 019414          217 -EVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDG  250 (341)
Q Consensus       217 -~~i~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~  250 (341)
                       +.+.+.... .+|+|+.+..+...+.-.+..+..+
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g  117 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG  117 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC
Confidence             122222223 6889988877777888888888874

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.84  E-value=0.1  Score=43.51  Aligned_cols=37  Identities=27%  Similarity=0.329  Sum_probs=31.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .....+|+|+|+|..|+.++..+...|. +|++++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            3445689999999999999999988998 999998754

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.74  E-value=0.094  Score=42.66  Aligned_cols=33  Identities=27%  Similarity=0.395  Sum_probs=28.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .|+|+|+|..|++++.+++..|...|.++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            589999999999999999999976888887764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=91.60  E-value=0.073  Score=42.70  Aligned_cols=33  Identities=27%  Similarity=0.446  Sum_probs=28.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      +|+|+|+|..|+.++..++..|.+.|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999999999999975799998764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.40  E-value=0.2  Score=38.15  Aligned_cols=42  Identities=19%  Similarity=0.283  Sum_probs=32.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  197 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~  197 (341)
                      --++.+|||+|+|+++.+++..+..  ..+|..+.|+.+|.+.+
T Consensus        15 ~~~~k~vlIlGaGG~arai~~aL~~--~~~i~I~nR~~~ka~~l   56 (177)
T d1nvta1          15 RVKDKNIVIYGAGGAARAVAFELAK--DNNIIIANRTVEKAEAL   56 (177)
T ss_dssp             CCCSCEEEEECCSHHHHHHHHHHTS--SSEEEEECSSHHHHHHH
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHcc--ccceeeehhhhhHHHHH
Confidence            3478899999999999987766543  34888998998886654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.30  E-value=0.17  Score=40.74  Aligned_cols=89  Identities=18%  Similarity=0.207  Sum_probs=57.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce-ecCCCCCChhHHHHHHHHh-cCCcc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMT-NGGVD  228 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-vv~~~~~~~~~~~~i~~~~-~~~~d  228 (341)
                      .++.+||=+|+| .|..+..+++ .|. .|++++.+++..+.+++    .+... ++.   .+      +..+. ++.||
T Consensus        36 ~~~~~vLDiGCG-~G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~---~d------~~~~~~~~~fD  103 (246)
T d1y8ca_          36 LVFDDYLDLACG-TGNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLAC---QD------ISNLNINRKFD  103 (246)
T ss_dssp             CCTTEEEEETCT-TSTTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEEC---CC------GGGCCCSCCEE
T ss_pred             CCCCeEEEEeCc-CCHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeec---cc------hhhhccccccc
Confidence            345789999986 3667777766 477 89999999998777654    33321 221   11      11222 34799


Q ss_pred             EEEeccC------Ch----HHHHHHHHHhcCCCcEEEE
Q 019414          229 RSVECTG------NI----DNMISAFECVHDGWGVAVL  256 (341)
Q Consensus       229 ~vld~~g------~~----~~~~~~~~~l~~~~g~~v~  256 (341)
                      +|+-..+      ..    ..++.+.++|+|+ |.++.
T Consensus       104 ~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         104 LITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             ccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            9984322      11    2577888888998 98875

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.28  E-value=0.14  Score=40.89  Aligned_cols=34  Identities=26%  Similarity=0.320  Sum_probs=29.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      .-.+|+|+|+|..|++++..+...|. +|.++++.
T Consensus         5 ~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           5 SQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            34579999999999999999999999 89999864

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=91.20  E-value=0.17  Score=35.69  Aligned_cols=35  Identities=23%  Similarity=0.201  Sum_probs=30.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      .++++|+|+|.+|+=+++.++.+|. +|..+.+.+.
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            3689999999999999999999999 8888877653

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.10  E-value=0.28  Score=40.36  Aligned_cols=97  Identities=20%  Similarity=0.219  Sum_probs=59.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC-ce-ec----CCC-------CCChhHHHHHHH
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TD-FV----NTS-------EHDRPIQEVIAE  221 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~-~~-vv----~~~-------~~~~~~~~~i~~  221 (341)
                      ....+|||+|+|. |..+-.+++. +..+|.+++.+++=.+.++++-. .. ..    ...       ..|  ..+-+++
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~D--a~~~l~~  146 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGD--GFEFIKN  146 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESC--HHHHHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEECh--HHHHHhc
Confidence            3457899997643 3333444553 44589999999999998887431 10 00    000       112  3344433


Q ss_pred             HhcCCccEEE-eccCC---------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          222 MTNGGVDRSV-ECTGN---------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       222 ~~~~~~d~vl-d~~g~---------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                        .+++|+|| |....         .+-++.+.++|+++ |.++.-.
T Consensus       147 --~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         147 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             --cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence              35899986 54431         34578899999998 9888754

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.10  E-value=0.18  Score=35.66  Aligned_cols=35  Identities=20%  Similarity=0.282  Sum_probs=30.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ..++++|+|+|.+|+=.++.+..+|. +|..+.+++
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            34889999999999999999999999 788886553

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.06  E-value=0.096  Score=43.19  Aligned_cols=33  Identities=27%  Similarity=0.392  Sum_probs=29.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      .|+|+|+|..|++++..++..|. +|++++++++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            48999999999999999999999 8999988653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=90.99  E-value=0.3  Score=41.12  Aligned_cols=98  Identities=16%  Similarity=0.244  Sum_probs=60.0

Q ss_pred             CCCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHh--cC
Q 019414          154 PERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT--NG  225 (341)
Q Consensus       154 ~~~g~~vlI~G~--g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~--~~  225 (341)
                      ..+|++||=.++  |+.+   +.+|+  |+..|++++.+++..+.+++    .|.+.+ .....+  ..+.++.+.  ++
T Consensus       143 ~~~g~rVLDl~~gtG~~s---~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~-~~i~~d--~~~~~~~~~~~~~  214 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFA---LHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNV-RVLEAN--AFDLLRRLEKEGE  214 (318)
T ss_dssp             GCCEEEEEEETCTTTHHH---HHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTE-EEEESC--HHHHHHHHHHTTC
T ss_pred             HhCCCeeeccCCCCcHHH---HHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCc-ceeecc--HHHHhhhhHhhhc
Confidence            346889988865  4444   44453  33499999999999887764    455422 111122  333333332  23


Q ss_pred             CccEEE-eccC----C----------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          226 GVDRSV-ECTG----N----------IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       226 ~~d~vl-d~~g----~----------~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      .||+|+ |.-.    .          .+.+..++++|+|+ |.++.+...
T Consensus       215 ~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs  263 (318)
T d1wxxa2         215 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCS  263 (318)
T ss_dssp             CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             CCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence            799987 5321    1          13566788899998 999888654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.95  E-value=0.21  Score=41.96  Aligned_cols=32  Identities=22%  Similarity=0.185  Sum_probs=28.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      .++||+|+ |-+|...+..+...|+ .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            36899987 9999999999999999 89999874

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.88  E-value=0.16  Score=42.36  Aligned_cols=36  Identities=25%  Similarity=0.386  Sum_probs=31.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ++..+|+|+|+|..|+.++..+...|+ +|++.+.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            455679999999999999999999999 899998654

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.87  E-value=0.25  Score=36.75  Aligned_cols=37  Identities=30%  Similarity=0.353  Sum_probs=31.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .-+.+|+|+|+|.+|.=++..+.++|++.|+.+.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3467899999999999999999999998888886643

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.66  E-value=0.22  Score=35.41  Aligned_cols=34  Identities=18%  Similarity=0.299  Sum_probs=30.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ..+++|+|+|.+|+=+++++..+|. +|..+.+++
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            3689999999999999999999999 898887654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=90.64  E-value=0.51  Score=38.57  Aligned_cols=34  Identities=21%  Similarity=0.190  Sum_probs=28.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      -.+|||+|+ |.+|...+..+...|. .|+++.++.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence            356999987 9999999998888998 788887754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=90.57  E-value=0.24  Score=42.22  Aligned_cols=33  Identities=24%  Similarity=0.281  Sum_probs=27.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      ..+||+|+ |-+|...+..+...|. .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            35789986 9999999999988898 999998743

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.56  E-value=0.083  Score=42.31  Aligned_cols=74  Identities=23%  Similarity=0.303  Sum_probs=45.2

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCCce-ecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~-vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      +.+|||+|+ |.+|...++.+...|. .+|+++.+++.+...-..-.... +.|..+.     +.+.+.. .++|+++.+
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~-----~~~~~~~-~~~d~vi~~   87 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKL-----DDYASAF-QGHDVGFCC   87 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGG-----GGGGGGG-SSCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccc-----ccccccc-ccccccccc
Confidence            468999987 9999999888877774 58989888654422211111221 2233221     1122221 269999999


Q ss_pred             cCC
Q 019414          234 TGN  236 (341)
Q Consensus       234 ~g~  236 (341)
                      .|.
T Consensus        88 ~~~   90 (232)
T d2bkaa1          88 LGT   90 (232)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            875

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.54  E-value=1.2  Score=33.63  Aligned_cols=84  Identities=10%  Similarity=0.083  Sum_probs=48.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHHcCCceecCCC--CC----ChhHHHHHHHHhcCCccEE
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTS--EH----DRPIQEVIAEMTNGGVDRS  230 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~--~~~~~~~~g~~~vv~~~--~~----~~~~~~~i~~~~~~~~d~v  230 (341)
                      +|.|+|+|..|.+.+..+...|. .|....++.+  ..+.+.+-.-.......  ..    ..+..+.+     ...|+|
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~ad~I   75 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-----ENAEVV   75 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-----TTCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH-----hccchh
Confidence            47899999999998888888887 8888866433  23333322110000000  00    01122222     248999


Q ss_pred             EeccCChHHHHHHHHHhcC
Q 019414          231 VECTGNIDNMISAFECVHD  249 (341)
Q Consensus       231 ld~~g~~~~~~~~~~~l~~  249 (341)
                      +.++.+ ..++..++.+.+
T Consensus        76 i~avps-~~~~~~~~~l~~   93 (180)
T d1txga2          76 LLGVST-DGVLPVMSRILP   93 (180)
T ss_dssp             EECSCG-GGHHHHHHHHTT
T ss_pred             hcccch-hhhHHHHHhhcc
Confidence            999976 555555555544

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.47  E-value=0.26  Score=35.62  Aligned_cols=39  Identities=23%  Similarity=0.297  Sum_probs=33.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      .++++.+|+|+|+|.+|+=++..++.+|. .|..+++.+.
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            45667899999999999999999999998 8998876653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.39  E-value=0.14  Score=40.85  Aligned_cols=36  Identities=28%  Similarity=0.266  Sum_probs=30.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF  194 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~  194 (341)
                      .++||+|+ +++|.+.++.+...|+ +|+.+++++++.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~   38 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE   38 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc
Confidence            46788887 9999999999999999 899998887643

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.33  E-value=0.97  Score=33.93  Aligned_cols=95  Identities=21%  Similarity=0.297  Sum_probs=57.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHHcCCce------e--------c------CCCCCChhHH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGVTD------F--------V------NTSEHDRPIQ  216 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~--~~~~~~~~~g~~~------v--------v------~~~~~~~~~~  216 (341)
                      +|.|.|-|-+|+++.+++...+. .++++-...  +....+-++.-.+      +        +      .+.+.+    
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~----   76 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD----   76 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS----
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC----
Confidence            57899999999999998887788 566654322  3333343332211      0        0      011111    


Q ss_pred             HHHHHHhc--CCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          217 EVIAEMTN--GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       217 ~~i~~~~~--~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                        ..++..  .++|+|+||+|.....+.+..++..+ .+=|++..+.
T Consensus        77 --p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~  120 (168)
T d2g82a1          77 --PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPA  120 (168)
T ss_dssp             --GGGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             --hHHCcccccCCceeEeccccccchHHhhhhhccc-cceeeecccc
Confidence              111222  27999999999877778888888876 5555555433

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=90.30  E-value=1.2  Score=33.91  Aligned_cols=106  Identities=21%  Similarity=0.259  Sum_probs=63.8

Q ss_pred             hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCcc
Q 019414          150 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  228 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d  228 (341)
                      ....+++|.. +|-++ |.=|+ +..+++. +. +|++++++++..+.+++.--..+--.+..-.++.+.+.....+.+|
T Consensus        12 ~~l~~~~g~~-~vD~T~G~GGh-s~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vd   87 (182)
T d1wg8a2          12 DLLAVRPGGV-YVDATLGGAGH-ARGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVD   87 (182)
T ss_dssp             HHHTCCTTCE-EEETTCTTSHH-HHHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred             HhcCCCCCCE-EEEeCCCCcHH-HHHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccC
Confidence            4456788886 45554 44444 3444443 44 9999999999998888754333211122212255544444334788


Q ss_pred             EEEeccCCh---------------HHHHHHHHHhcCCCcEEEEEccC
Q 019414          229 RSVECTGNI---------------DNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       229 ~vld~~g~~---------------~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      .|+=-.|-.               ..++.++..+.++ |+++.+...
T Consensus        88 gIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~fh  133 (182)
T d1wg8a2          88 GILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAFH  133 (182)
T ss_dssp             EEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEECS
T ss_pred             EEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEecc
Confidence            876333421               2477888888997 888877653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=90.29  E-value=1  Score=38.46  Aligned_cols=31  Identities=35%  Similarity=0.321  Sum_probs=27.5

Q ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Q 019414          157 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  188 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~  188 (341)
                      |.+|||+|+ |-+|..++..+...|+ .|++++
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            678999987 9999999999999998 899986

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.26  E-value=0.69  Score=38.02  Aligned_cols=100  Identities=16%  Similarity=0.278  Sum_probs=59.5

Q ss_pred             hcCCCCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCceec-CCCCCChhHHHHHHHHh
Q 019414          151 VAKPERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFV-NTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       151 ~~~~~~g~~vlI~G~--g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vv-~~~~~~~~~~~~i~~~~  223 (341)
                      ...+++|++||=..+  |+=..   +++....-..|++.+.++.|.+.+    +.+|...++ ...+..  ..   ....
T Consensus        97 ~L~~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~--~~---~~~~  168 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY--PS---QWCG  168 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC--TH---HHHT
T ss_pred             ccCccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccc--cc---hhcc
Confidence            457899999998843  44333   333333324899999999997655    457875432 222211  11   1122


Q ss_pred             cCCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 NGGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .+.||.|+ |  |+|.                         ...+..+++.++++ |++|..-.
T Consensus       169 ~~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYsTC  231 (284)
T d1sqga2         169 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYATC  231 (284)
T ss_dssp             TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEES
T ss_pred             cccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEeee
Confidence            34799885 6  4543                         13455667777886 87776654

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=90.14  E-value=0.45  Score=37.57  Aligned_cols=91  Identities=18%  Similarity=0.170  Sum_probs=58.9

Q ss_pred             EEEEECCCHHHHH-HHHHHHH-cCCCEEEEEcCChhhHH-HHHHcCCce--ecCCCCCChhHHHHHHHHhcC-CccEEEe
Q 019414          159 SVAVFGLGAVGLA-AAEGARI-AGASRIIGVDRSSKRFE-EAKKFGVTD--FVNTSEHDRPIQEVIAEMTNG-GVDRSVE  232 (341)
Q Consensus       159 ~vlI~G~g~~G~~-a~~la~~-~g~~~vv~v~~~~~~~~-~~~~~g~~~--vv~~~~~~~~~~~~i~~~~~~-~~d~vld  232 (341)
                      +|.|+|+|.+|.- .+...+. -+.+.+.++++++++.+ .++++|.+.  +..+++    +    .++... .+|+|+-
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d----~----~ell~~~~iD~V~I  106 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN----F----DKIAKDPKIDAVYI  106 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS----G----GGGGGCTTCCEEEE
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc----h----hhhcccccceeeee
Confidence            6888999999863 4444343 36634446677777755 456677642  323333    1    222233 7999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          233 CTGNIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       233 ~~g~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ++......+.+.+++..  |+-+++.-
T Consensus       107 ~tp~~~H~~~~~~al~~--gk~v~~EK  131 (221)
T d1h6da1         107 ILPNSLHAEFAIRAFKA--GKHVMCEK  131 (221)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECS
T ss_pred             ccchhhhhhHHHHhhhc--chhhhcCC
Confidence            98887788888888876  67777764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.13  E-value=0.24  Score=35.38  Aligned_cols=36  Identities=22%  Similarity=0.286  Sum_probs=31.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      +..++++|+|+|.+|+=.++..+.+|. +|..+.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            335899999999999999999999999 888887653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.07  E-value=0.23  Score=38.79  Aligned_cols=41  Identities=34%  Similarity=0.535  Sum_probs=35.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  200 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~  200 (341)
                      +|.|+|.|-+|+.++..+...|. .|++.+.++++.+.+.+-
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence            47899999999998888888898 999999999998887653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.05  E-value=1.6  Score=31.87  Aligned_cols=38  Identities=26%  Similarity=0.379  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKR  193 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~  193 (341)
                      .+.+|.|+|+|.+|...+..+...+. .+++.++.++++
T Consensus         5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            45689999999999998888887774 589999988876

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.00  E-value=0.19  Score=35.76  Aligned_cols=33  Identities=24%  Similarity=0.127  Sum_probs=28.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      .++++|+|+|.+|+=.+++++.+|. .|..+.++
T Consensus        20 P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            4689999999999999999999999 67777654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.97  E-value=0.18  Score=35.98  Aligned_cols=36  Identities=22%  Similarity=0.276  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      ..++++|+|+|.+|+=++++...+|. +|..+.+++.
T Consensus        24 ~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             cCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence            35789999999999999999999998 8999977654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.94  E-value=0.16  Score=39.35  Aligned_cols=89  Identities=12%  Similarity=0.180  Sum_probs=56.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.++.|+|.|.+|...+++++.+|. +|+..++...........+...   ..+    +.+.+.+     .|+|..++.
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~~~----l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---HDS----LDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---CSS----HHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---cCC----HHHHHhh-----CCeEEecCC
Confidence            47899999999999999999999999 8888887655444333333221   111    3333333     577765443


Q ss_pred             -ChHH----HHHHHHHhcCCCcEEEEEc
Q 019414          236 -NIDN----MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 -~~~~----~~~~~~~l~~~~g~~v~~g  258 (341)
                       ++++    =...++.++++ ..++.++
T Consensus       113 lt~~T~~li~~~~l~~mk~~-a~lIN~s  139 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQG-AIVVNTA  139 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred             CCchHhheecHHHhhCcCCc-cEEEecC
Confidence             2221    12566677775 6666665

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.91  E-value=0.26  Score=34.54  Aligned_cols=34  Identities=26%  Similarity=0.339  Sum_probs=29.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .++++|+|+|.+|+=+++.++.+|. +|..+++.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            3789999999999999999999998 888887654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.83  E-value=0.35  Score=39.89  Aligned_cols=76  Identities=18%  Similarity=0.198  Sum_probs=43.6

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCC--EEEEEcCChhhHH----HHHHcC---Cce---ecCCCCCChhHHHHHHHHhcCC
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGAS--RIIGVDRSSKRFE----EAKKFG---VTD---FVNTSEHDRPIQEVIAEMTNGG  226 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~--~vv~v~~~~~~~~----~~~~~g---~~~---vv~~~~~~~~~~~~i~~~~~~~  226 (341)
                      |||+|+ +++|.+.+..+...|++  .|+.+.++.++.+    .++++.   ...   .+|..+.+ ...+.+.+...+.
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~g~   83 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSK-SVAAARERVTEGR   83 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHH-HHHHHHHTCTTSC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchH-hhhhhhhhccccc
Confidence            466787 99999998888888874  2334444443332    233332   211   23444332 2333344444458


Q ss_pred             ccEEEeccCC
Q 019414          227 VDRSVECTGN  236 (341)
Q Consensus       227 ~d~vld~~g~  236 (341)
                      +|+++++.|.
T Consensus        84 idilvnnag~   93 (285)
T d1jtva_          84 VDVLVCNAGL   93 (285)
T ss_dssp             CSEEEECCCC
T ss_pred             hhhhhhcccc
Confidence            9999998764

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.81  E-value=0.093  Score=44.06  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=27.0

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  189 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~  189 (341)
                      .+|||+|+ |-+|...+..+...|+ .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            47999987 9999999988888898 8888864

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.81  E-value=0.28  Score=34.94  Aligned_cols=33  Identities=15%  Similarity=0.175  Sum_probs=30.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .+++|+|+|.+|+=++..++.+|. +|..+.+++
T Consensus        23 k~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             SEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            689999999999999999999999 888887764

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=89.69  E-value=1.6  Score=32.68  Aligned_cols=95  Identities=20%  Similarity=0.140  Sum_probs=53.9

Q ss_pred             CCCCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-eecCCCCCChhHHHHHHHHhcC
Q 019414          153 KPERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNG  225 (341)
Q Consensus       153 ~~~~g~~vlI~G~--g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~vv~~~~~~~~~~~~i~~~~~~  225 (341)
                      ++.+|.+||=.++  |.+|+   . |...|+ .+++++.+++..+.+++    ++.. .++.... +  ..........+
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~-d--~~~~~~~~~~~  109 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV-E--VFLPEAKAQGE  109 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH-H--HHHHHHHHTTC
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh-h--cccccccccCC
Confidence            5678889887753  66554   3 334688 78899999999877653    5553 3332211 1  11112223334


Q ss_pred             CccEEE-ec---cCChHHHHHHHH--HhcCCCcEEEE
Q 019414          226 GVDRSV-EC---TGNIDNMISAFE--CVHDGWGVAVL  256 (341)
Q Consensus       226 ~~d~vl-d~---~g~~~~~~~~~~--~l~~~~g~~v~  256 (341)
                      .||+|| |.   .+-.+.+..+..  +++++ |.++.
T Consensus       110 ~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         110 RFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             CEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             ccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            799997 53   222234444433  46776 76654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=89.64  E-value=0.16  Score=41.09  Aligned_cols=32  Identities=28%  Similarity=0.363  Sum_probs=28.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      |+|+|+|+.|++++..+...|. +|+.++++++
T Consensus         7 ViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           7 NIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            8899999999999998888998 8999988764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.57  E-value=0.24  Score=41.28  Aligned_cols=43  Identities=23%  Similarity=0.247  Sum_probs=33.6

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHHcCC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGV  202 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~--~~~~~~~~g~  202 (341)
                      +|||+|+ |-+|...+..+...|+ +|+++++...  ..+.++.++.
T Consensus         2 ~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           2 SALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            7999987 9999999998888899 8999887542  3455555554

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=89.49  E-value=0.12  Score=44.29  Aligned_cols=31  Identities=16%  Similarity=0.314  Sum_probs=26.2

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  189 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~  189 (341)
                      +|||+|+ |-+|...+..+...|...|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            5899987 999999999888889866777764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.45  E-value=2.1  Score=34.30  Aligned_cols=33  Identities=30%  Similarity=0.422  Sum_probs=29.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  188 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~  188 (341)
                      -.|.+|+|.|.|.+|..+++.+...|+ +|+++.
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            468899999999999999999999999 777764

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=89.33  E-value=1.3  Score=33.36  Aligned_cols=95  Identities=22%  Similarity=0.379  Sum_probs=56.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC----CCEEEEEcC--ChhhHHHHHHcCCce--------------ecC------CCCCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAG----ASRIIGVDR--SSKRFEEAKKFGVTD--------------FVN------TSEHD  212 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g----~~~vv~v~~--~~~~~~~~~~~g~~~--------------vv~------~~~~~  212 (341)
                      +|.|.|-|-+|++..+.+...+    . .|+++-.  +.+.+..+-++.-.+              +++      +.+.+
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            4788999999999988775432    3 5666653  334444443332110              010      11111


Q ss_pred             hhHHHHHHHHhc-C-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          213 RPIQEVIAEMTN-G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       213 ~~~~~~i~~~~~-~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                            ..++.. + ++|+|+||+|.-...+.+..+|..+ .+-|++..+.
T Consensus        82 ------p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP~  125 (173)
T d1obfo1          82 ------PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAPG  125 (173)
T ss_dssp             ------GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSCC
T ss_pred             ------HHHCcccccccceEEEecccccCHHHHHHHhccC-CcceEEecCC
Confidence                  112222 2 8999999999877778888899887 6656665443

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.32  E-value=0.16  Score=39.84  Aligned_cols=31  Identities=26%  Similarity=0.349  Sum_probs=27.3

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|+.|+.++..+..+|. +|+.++..+
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~-kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRG   36 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            7889999999999999999999 888887653

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.32  E-value=0.18  Score=39.79  Aligned_cols=31  Identities=19%  Similarity=0.396  Sum_probs=28.0

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|..|+.++..+...|. +|.++++++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7889999999999988888998 899999865

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=89.32  E-value=1.9  Score=33.29  Aligned_cols=95  Identities=16%  Similarity=0.088  Sum_probs=61.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCceecCCCCCChhHHHHHHHHhcCCccEEEecc
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  234 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~  234 (341)
                      .||=+|+|. |..++.+|+...-..+++++.+......+    ++.+.+.+.-.. .+  ...-...+.++.+|.|+-..
T Consensus        32 lvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~-~D--a~~l~~~~~~~~~d~v~i~f  107 (204)
T d2fcaa1          32 IHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLN-ID--ADTLTDVFEPGEVKRVYLNF  107 (204)
T ss_dssp             EEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEEC-CC--GGGHHHHCCTTSCCEEEEES
T ss_pred             eEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcc-cc--hhhhhcccCchhhhcccccc
Confidence            345568764 88888999987544999999999876654    456765432111 11  22122233334788876443


Q ss_pred             CC--------------hHHHHHHHHHhcCCCcEEEEEc
Q 019414          235 GN--------------IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       235 g~--------------~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ..              ++.++.+.+.|+|+ |.+.+..
T Consensus       108 p~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~T  144 (204)
T d2fcaa1         108 SDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKT  144 (204)
T ss_dssp             CCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEE
T ss_pred             ccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEEE
Confidence            32              35788899999998 9987764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=89.26  E-value=0.49  Score=39.67  Aligned_cols=73  Identities=16%  Similarity=0.125  Sum_probs=44.6

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CCcee-cCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~~v-v~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|||+|+ |-+|...++.+...|..+|++++....+...+.+. .+..+ .|....+ ++.+...+    ++|+|+.+.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~-~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHS-EWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCS-HHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChH-HHHHHHHh----CCCccccccc
Confidence            5899987 99999999888777844899987765544433221 22222 1222222 23332222    4899999876


Q ss_pred             C
Q 019414          236 N  236 (341)
Q Consensus       236 ~  236 (341)
                      .
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.26  E-value=0.63  Score=39.13  Aligned_cols=31  Identities=23%  Similarity=0.157  Sum_probs=26.2

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  189 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~  189 (341)
                      ..|||+|+ |-+|...+..+...|+ +|+++++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            36899987 9999999988888898 8888854

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.25  E-value=0.17  Score=40.45  Aligned_cols=32  Identities=44%  Similarity=0.597  Sum_probs=27.9

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      |+|+|+|..|++++..+...|. +|+.+++++.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            7899999999998888888999 8999987653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=89.21  E-value=0.44  Score=34.09  Aligned_cols=62  Identities=21%  Similarity=0.160  Sum_probs=48.6

Q ss_pred             hhhhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          148 TLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~-G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      +++.++++.-+.+++. ..-..-+++.+++|.+|..++++...+++..+.++++|++.++++.
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p~  119 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSPE  119 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECHH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECHH
Confidence            3456677776766654 4445667888999999988899988899999999999999988664

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.20  E-value=1.3  Score=36.80  Aligned_cols=108  Identities=20%  Similarity=0.120  Sum_probs=67.8

Q ss_pred             hhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCceecCCCC----------------
Q 019414          150 NVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSE----------------  210 (341)
Q Consensus       150 ~~~~~~~g~~vlI~-G~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vv~~~~----------------  210 (341)
                      +...++++...+|. .+|+.|++.+..++.+|.+-++++..  ++.|.+.++.+|++.++....                
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence            44556666555555 56999999999999999854444432  567888899999975421110                


Q ss_pred             -----------CCh-------hHHHHHHHHhcCCccEEEeccCChHHHH---HHHHHhcCCCcEEEEEc
Q 019414          211 -----------HDR-------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVG  258 (341)
Q Consensus       211 -----------~~~-------~~~~~i~~~~~~~~d~vld~~g~~~~~~---~~~~~l~~~~g~~v~~g  258 (341)
                                 ...       ....++.+...+.+|.++-++|+..++.   ..++...+. -+++.+.
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igve  204 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGVE  204 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeeccc
Confidence                       000       1222333344456899999998766544   444555565 6666654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=89.18  E-value=0.21  Score=38.93  Aligned_cols=85  Identities=18%  Similarity=0.187  Sum_probs=53.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...+++++.+|. +|++.++...+.       ....+...  +  +.+.+..     .|++.-++.
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~~--~--l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKG-------DHPDFDYV--S--LEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSS-------CCTTCEEC--C--HHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchh-------hhcchhHH--H--HHHHHHh-----cccceeeec
Confidence            46789999999999999999999999 999998754321       00011111  1  3333322     577765443


Q ss_pred             -ChHH----HHHHHHHhcCCCcEEEEEc
Q 019414          236 -NIDN----MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 -~~~~----~~~~~~~l~~~~g~~v~~g  258 (341)
                       ++++    -...+..++++ ..++-++
T Consensus       107 lt~~T~~li~~~~l~~mk~~-a~lIN~a  133 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPG-AIVINTA  133 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTT-EEEEECS
T ss_pred             ccccccccccHHHhhccCCc-eEEEecc
Confidence             3221    23566777776 6666655

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.17  E-value=2.4  Score=34.63  Aligned_cols=99  Identities=18%  Similarity=0.152  Sum_probs=64.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCceecCCC------------------
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTS------------------  209 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vv~~~------------------  209 (341)
                      +....+++..|+..++|+.|.+++..++.+|.+-++.+..  ++.+.+.++.+|++.+....                  
T Consensus        54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~  133 (302)
T d1fcja_          54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASD  133 (302)
T ss_dssp             HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHTS
T ss_pred             HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhhh
Confidence            4456777777666678999999999999999864444433  55777788888886541110                  


Q ss_pred             --------CCCh---------hHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhc
Q 019414          210 --------EHDR---------PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH  248 (341)
Q Consensus       210 --------~~~~---------~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~  248 (341)
                              ..+.         ....++.+..++.+|+++-++|+..++.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk  189 (302)
T d1fcja_         134 PQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK  189 (302)
T ss_dssp             TTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred             ccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence                    0000         12233444445568999999988666655555444

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=88.84  E-value=0.27  Score=37.67  Aligned_cols=35  Identities=34%  Similarity=0.602  Sum_probs=32.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .|.+|.|+|.|.+|...+++++.+|. +|++.+++.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~   75 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTP   75 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccc
Confidence            57899999999999999999999999 999998764

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.83  E-value=0.22  Score=41.75  Aligned_cols=35  Identities=14%  Similarity=0.268  Sum_probs=30.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      ..+|+|+|+|..|+.++..+...|. +|.+++.++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence            4679999999999999999888898 9999987653

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=88.78  E-value=0.92  Score=38.01  Aligned_cols=103  Identities=12%  Similarity=0.123  Sum_probs=64.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCceecCCCCCCh-------------------
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEHDR-------------------  213 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vv~~~~~~~-------------------  213 (341)
                      .+..+|+...+|+.|.+++..++.+|.+.++.+..  +.+|.+.++.+|++.++.....+.                   
T Consensus        73 ~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (331)
T d1tdja1          73 QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP  152 (331)
T ss_dssp             SCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred             CCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence            34455666567999999999999999955554433  557788899999976543222110                   


Q ss_pred             -----------hHHHHHHHHhcCCccEEEeccCChHHHH---HHHHHhcCCCcEEEEEcc
Q 019414          214 -----------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       214 -----------~~~~~i~~~~~~~~d~vld~~g~~~~~~---~~~~~l~~~~g~~v~~g~  259 (341)
                                 ....++.+.. +.+|++|-++|+..++.   ..++.+.+. -+++.+..
T Consensus       153 ~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve~  210 (331)
T d1tdja1         153 FDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVEA  210 (331)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             cCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEecc
Confidence                       0222222221 25899999998765543   455555665 67777653

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=88.75  E-value=0.31  Score=33.28  Aligned_cols=25  Identities=36%  Similarity=0.494  Sum_probs=20.1

Q ss_pred             cceEEEEEecCCCC----------CCCCCCEEEec
Q 019414           32 EAAGVVESVGEGVS----------DLEVGDHVLPV   56 (341)
Q Consensus        32 e~~G~V~~vG~~v~----------~~~~Gd~V~~~   56 (341)
                      ...|+|+++|++..          .+++||+|+..
T Consensus        37 ~~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          37 PQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             ceEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            34699999999742          48899999876

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.66  E-value=0.23  Score=40.37  Aligned_cols=40  Identities=23%  Similarity=0.259  Sum_probs=30.5

Q ss_pred             CCEEEEECC-CHHHHHHHH-HHHH--cCCCEEEEEcCChhhHHHH
Q 019414          157 GSSVAVFGL-GAVGLAAAE-GARI--AGASRIIGVDRSSKRFEEA  197 (341)
Q Consensus       157 g~~vlI~G~-g~~G~~a~~-la~~--~g~~~vv~v~~~~~~~~~~  197 (341)
                      |..+||+|+ +++|.+.++ +|+.  .|+ +|+.+++++++.+.+
T Consensus         6 gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence            455677787 899998765 5553  588 899999999887654

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=88.65  E-value=0.19  Score=38.06  Aligned_cols=29  Identities=31%  Similarity=0.273  Sum_probs=26.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDR  189 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~  189 (341)
                      |+|+|+|+.|+.++..|...|. +|+.+++
T Consensus         4 ViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           4 VLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             EEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            7889999999999999999999 7888874

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=88.59  E-value=1.7  Score=32.49  Aligned_cols=96  Identities=24%  Similarity=0.355  Sum_probs=59.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCEEEEEcC---ChhhHHHHHHcCCce--------------ecC------CCCCChh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAG-ASRIIGVDR---SSKRFEEAKKFGVTD--------------FVN------TSEHDRP  214 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~---~~~~~~~~~~~g~~~--------------vv~------~~~~~~~  214 (341)
                      +|.|.|-|-+|+++...+.... . .++++-.   +.+....+-++...+              .++      ++..+  
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~--   79 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD--   79 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS--
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCC--
Confidence            5889999999999998777554 5 6666633   335555554432211              010      01111  


Q ss_pred             HHHHHHHHhc-C-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC
Q 019414          215 IQEVIAEMTN-G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  262 (341)
Q Consensus       215 ~~~~i~~~~~-~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  262 (341)
                          ..++.. + ++|+|+||+|.....+.+..++..+ .+-|++..+..
T Consensus        80 ----p~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~g-akkViiSaP~~  124 (169)
T d1u8fo1          80 ----PSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRVIISAPSA  124 (169)
T ss_dssp             ----GGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGT-CSEEEESSCCS
T ss_pred             ----hhhCCccccCCCEEEEecceeccHHHHHHHHhcC-CceEeeccccc
Confidence                112222 2 7999999999877778888888886 65566654443

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=88.58  E-value=0.69  Score=37.26  Aligned_cols=100  Identities=13%  Similarity=-0.042  Sum_probs=65.2

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC-ceecCCCCCChhHHHHHHHHh--cCC
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMT--NGG  226 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~-~~vv~~~~~~~~~~~~i~~~~--~~~  226 (341)
                      ......++.+||=+|+|. |..+..+++.... .|.+++.+++-.+.+++.-. ...+++...+      +.++.  ++.
T Consensus        87 ~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d------~~~~~~~~~~  158 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILAS------METATLPPNT  158 (254)
T ss_dssp             HTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESC------GGGCCCCSSC
T ss_pred             hhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEcc------ccccccCCCc
Confidence            444556778898888864 7888888876665 89999999999998886422 1122111111      11121  237


Q ss_pred             ccEEEeccC-----Ch---HHHHHHHHHhcCCCcEEEEEc
Q 019414          227 VDRSVECTG-----NI---DNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       227 ~d~vld~~g-----~~---~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ||+|+-.-.     .+   ..+..+.+.|+++ |.+++..
T Consensus       159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            999875321     11   3477888999998 9988764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.51  E-value=0.39  Score=40.78  Aligned_cols=35  Identities=17%  Similarity=0.273  Sum_probs=29.7

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .+-+|||+|+ |-+|...+..+...|. .|+++++..
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~   49 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKK   49 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCC
Confidence            4668999987 9999999999999998 888886543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.47  E-value=0.35  Score=36.11  Aligned_cols=36  Identities=28%  Similarity=0.395  Sum_probs=29.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCCh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~-~vv~v~~~~  191 (341)
                      .|.+|+|+|+|..|+.+++.++.++.. +|+.+++++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            377999999999999998888887743 788887655

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=88.41  E-value=0.29  Score=40.10  Aligned_cols=35  Identities=23%  Similarity=0.198  Sum_probs=25.9

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-ChhhHH
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFE  195 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~-~~~~~~  195 (341)
                      +||+|+ +++|.+.++.+...|+ +|+.+.+ ++++.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEAN   41 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHH
Confidence            466686 8999999999999999 6665544 454443

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=88.26  E-value=2.4  Score=31.66  Aligned_cols=96  Identities=22%  Similarity=0.325  Sum_probs=60.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHHcCCce--------------ecC------CCCCChhH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKKFGVTD--------------FVN------TSEHDRPI  215 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~---~~~~~~~~~~~g~~~--------------vv~------~~~~~~~~  215 (341)
                      +|.|.|-|-+|+++...+...+. .++++-.   +.+....+-++.-.+              .++      .++.+   
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~---   77 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMK---   77 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSS---
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCC---
Confidence            58899999999999998887788 5555532   335555554432211              011      01111   


Q ss_pred             HHHHHHHhc-C-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC
Q 019414          216 QEVIAEMTN-G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  262 (341)
Q Consensus       216 ~~~i~~~~~-~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  262 (341)
                         ..++.. + ++|+|+||+|-....+.+..++..+ .+-|++..+..
T Consensus        78 ---p~~i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~~  122 (169)
T d1dssg1          78 ---PENIPWSKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPSA  122 (169)
T ss_dssp             ---GGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCCS
T ss_pred             ---hHHCCccccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCcc
Confidence               111111 2 7999999999877888888999887 66666655443

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.94  E-value=0.095  Score=41.63  Aligned_cols=98  Identities=12%  Similarity=0.014  Sum_probs=62.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce---ecCCCCCChhHHHHHHHH--hcCC
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD---FVNTSEHDRPIQEVIAEM--TNGG  226 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~---vv~~~~~~~~~~~~i~~~--~~~~  226 (341)
                      ....++.+||=+|+|. |..+..+++..+. +|++++.+++..+.+++.....   .+.+...+      +.++  ..+.
T Consensus        56 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d------~~~~~~~~~~  127 (222)
T d2ex4a1          56 PNKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCG------LQDFTPEPDS  127 (222)
T ss_dssp             --CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECC------GGGCCCCSSC
T ss_pred             cCCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccccccccc------cccccccccc
Confidence            3456778999998864 6667676665554 8999999999988887643211   11111111      1111  1237


Q ss_pred             ccEEEec-----cCCh---HHHHHHHHHhcCCCcEEEEEc
Q 019414          227 VDRSVEC-----TGNI---DNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       227 ~d~vld~-----~g~~---~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +|+|+..     +..+   +.+..+.+.|+|+ |.+++..
T Consensus       128 fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~  166 (222)
T d2ex4a1         128 YDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKD  166 (222)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEE
Confidence            9998853     2222   3677889999998 9998874

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.93  E-value=2.1  Score=31.22  Aligned_cols=71  Identities=15%  Similarity=0.159  Sum_probs=43.5

Q ss_pred             CCCEEEEEC--CCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHHhcCCccE
Q 019414          156 RGSSVAVFG--LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  229 (341)
Q Consensus       156 ~g~~vlI~G--~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~  229 (341)
                      .|.+||=.+  +|.+|+.+    ..+|++.|+.++.+.+..+.+++    ++...-+..-..+  ..+.+ +...+.||+
T Consensus        14 ~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D--~~~~l-~~~~~~fDi   86 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKME--AERAI-DCLTGRFDL   86 (152)
T ss_dssp             CSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSC--HHHHH-HHBCSCEEE
T ss_pred             CCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccc--ccccc-cccccccce
Confidence            577887774  46666633    34788899999999888766554    5653311111223  44444 334458999


Q ss_pred             EE-ec
Q 019414          230 SV-EC  233 (341)
Q Consensus       230 vl-d~  233 (341)
                      || |.
T Consensus        87 If~DP   91 (152)
T d2esra1          87 VFLDP   91 (152)
T ss_dssp             EEECC
T ss_pred             eEech
Confidence            87 53

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=87.88  E-value=0.17  Score=41.28  Aligned_cols=32  Identities=38%  Similarity=0.472  Sum_probs=28.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      +|+|+|+|..|+.++..+...|+ +|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            48999999999999999999999 899998753

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.80  E-value=0.39  Score=37.01  Aligned_cols=39  Identities=23%  Similarity=0.243  Sum_probs=33.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  199 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~  199 (341)
                      +|.|+|.|-+|+.++.++ +.|. .|++++.++++.+.++.
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            478899999999877655 4698 99999999999888764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=87.77  E-value=0.33  Score=37.62  Aligned_cols=88  Identities=24%  Similarity=0.298  Sum_probs=54.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.+|.|+|.|.+|...+++++.+|. +|++.++...+. .....+....   .  +  +.+.+.+     .|+|.-++.
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~---~--~--l~~ll~~-----sD~i~~~~p  113 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV---S--T--LQDLLFH-----SDCVTLHCG  113 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC---S--S--HHHHHHH-----CSEEEECCC
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc---c--c--hhhcccc-----CCEEEEeec
Confidence            57899999999999999999999999 899987754432 2333343221   1  1  3333333     577765443


Q ss_pred             -ChHH----HHHHHHHhcCCCcEEEEEc
Q 019414          236 -NIDN----MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 -~~~~----~~~~~~~l~~~~g~~v~~g  258 (341)
                       ++++    -...++.++++ ..++.++
T Consensus       114 lt~~T~~li~~~~l~~mk~~-a~lIN~s  140 (193)
T d1mx3a1         114 LNEHNHHLINDFTVKQMRQG-AFLVNTA  140 (193)
T ss_dssp             CCTTCTTSBSHHHHTTSCTT-EEEEECS
T ss_pred             ccccchhhhhHHHHhccCCC-CeEEecC
Confidence             2221    12455666765 6665555

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.68  E-value=1.3  Score=32.78  Aligned_cols=87  Identities=13%  Similarity=0.110  Sum_probs=56.2

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCEEEEEcCChhhHH-HHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          159 SVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~g~~G~~-a~~la~~~-g~~~vv~v~~~~~~~~-~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      +|.|+|+|.+|.- .+...+.. +...+.+.++++++.+ ..++++... ++  +    ..+ +.    ..+|+|+.|+.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~--~----~~~-l~----~~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-AD--S----LSS-LA----ASCDAVFVHSS   70 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-CS--S----HHH-HH----TTCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-cc--c----chh-hh----hhccccccccc
Confidence            5789999998864 56655544 6634445556666644 456677642 11  1    222 21    24899999988


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcc
Q 019414          236 NIDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       236 ~~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .....+.+..++..  |+-+++.-
T Consensus        71 ~~~h~~~~~~al~~--gk~V~~EK   92 (164)
T d1tlta1          71 TASHFDVVSTLLNA--GVHVCVDK   92 (164)
T ss_dssp             TTHHHHHHHHHHHT--TCEEEEES
T ss_pred             chhccccccccccc--cceeeccc
Confidence            77778888888876  56677764

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=87.66  E-value=0.44  Score=38.31  Aligned_cols=35  Identities=34%  Similarity=0.438  Sum_probs=30.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      -.|.+|+|.|.|.+|..+++++...|+ +|+++..+
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeecc
Confidence            478999999999999999999999999 88877643

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=87.57  E-value=0.31  Score=39.20  Aligned_cols=33  Identities=24%  Similarity=0.426  Sum_probs=28.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChh
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK  192 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~  192 (341)
                      .|||+|+ +++|++.++.+...|+ +|+.++++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            4688886 9999999999999999 8888887654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=87.52  E-value=0.56  Score=38.01  Aligned_cols=33  Identities=24%  Similarity=0.286  Sum_probs=28.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .+|||+|+ |.+|...+..+...|. .|++++++.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~   37 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGH-PTFLLVRES   37 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCC
Confidence            57999997 9999999999988998 888888754

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=87.45  E-value=0.15  Score=39.24  Aligned_cols=34  Identities=24%  Similarity=0.234  Sum_probs=29.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          157 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       157 g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      +..|+|+|+|+.|+.++..+.++|. +|+.+++..
T Consensus         5 ~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            4569999999999999999999999 788887544

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.37  E-value=0.23  Score=38.80  Aligned_cols=30  Identities=20%  Similarity=0.313  Sum_probs=27.0

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      |+|+|+|+.|+.++..|..+|. +|..++++
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6889999999999999999999 78888765

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.35  E-value=0.25  Score=36.45  Aligned_cols=33  Identities=21%  Similarity=0.314  Sum_probs=28.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  189 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~  189 (341)
                      .|.++||+|+|.+|.--+..+...|+ +|++++.
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence            47899999999999999999999999 7777743

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.30  E-value=0.27  Score=38.55  Aligned_cols=30  Identities=27%  Similarity=0.278  Sum_probs=27.5

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      ++|+|+|+.|+.++..|..+|. +|+.++..
T Consensus         8 lvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           8 LLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            7889999999999999999999 89999765

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=87.06  E-value=0.64  Score=34.40  Aligned_cols=40  Identities=18%  Similarity=0.167  Sum_probs=32.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019414          155 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  194 (341)
Q Consensus       155 ~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~  194 (341)
                      ++.-+|.|+|+|.+|...+.++...+...++.++.++++.
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            4557899999999999888888888876899998887653

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.04  E-value=0.3  Score=38.10  Aligned_cols=31  Identities=29%  Similarity=0.378  Sum_probs=27.2

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|+.|+.++..|...|. +|+.+++..
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~~   36 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKGN   36 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSC
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecCC
Confidence            6788999999999999999999 888887653

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=86.97  E-value=0.23  Score=37.59  Aligned_cols=83  Identities=14%  Similarity=0.132  Sum_probs=50.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  237 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~  237 (341)
                      +|.|+|.|.+|...+..++.. +++.|.++++++++.      ....+..+.+    .    ... ...+|+|+.|++..
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------~~~~~~~~~~----~----~~~-~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------TKTPVFDVAD----V----DKH-ADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------SSSCEEEGGG----G----GGT-TTTCSEEEECSCTT
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc------cccccccchh----h----hhh-ccccceEEEeCCCc
Confidence            588999999998877777754 563333444443321      1111111111    1    111 12589999999887


Q ss_pred             HHHHHHHHHhcCCCcEEEEE
Q 019414          238 DNMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       238 ~~~~~~~~~l~~~~g~~v~~  257 (341)
                      ...+.+.++|..| -.++..
T Consensus        70 ~h~~~a~~aL~aG-~~vv~~   88 (170)
T d1f06a1          70 TDIPEQAPKFAQF-ACTVDT   88 (170)
T ss_dssp             THHHHHHHHHTTT-SEEECC
T ss_pred             ccHHHHHHHHHCC-CcEEEe
Confidence            7888999999985 555544

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.86  E-value=1  Score=38.52  Aligned_cols=92  Identities=14%  Similarity=0.095  Sum_probs=62.2

Q ss_pred             ECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCcee--------------cCCCCCChhHHHHHHHHhc
Q 019414          163 FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--------------VNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       163 ~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v--------------v~~~~~~~~~~~~i~~~~~  224 (341)
                      -+-++.|.-++.+|+..|+..|++.+.+++..+.+++    .+....              +.....|  .-..+ ....
T Consensus        51 D~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~D--a~~~~-~~~~  127 (375)
T d2dula1          51 DALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDD--ANRLM-AERH  127 (375)
T ss_dssp             ESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESC--HHHHH-HHST
T ss_pred             EcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhh--hhhhh-Hhhc
Confidence            3556678888899998898899999999999888875    122110              1011112  22222 2223


Q ss_pred             CCccEE-EeccCCh-HHHHHHHHHhcCCCcEEEEEc
Q 019414          225 GGVDRS-VECTGNI-DNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       225 ~~~d~v-ld~~g~~-~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      +.||+| +|..|++ +.++.++++++.+ |.+....
T Consensus       128 ~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTa  162 (375)
T d2dula1         128 RYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTA  162 (375)
T ss_dssp             TCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEe
Confidence            379987 7999874 4688999999987 8887764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=86.81  E-value=2.8  Score=29.33  Aligned_cols=91  Identities=9%  Similarity=0.078  Sum_probs=57.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccCChH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  238 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~  238 (341)
                      +++|.|.|.+|...+..++  +. .+++++.++++.+.++..|...+. .+..+   .+.+++..-..++.++-+.....
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~~---~~~L~~a~i~~A~~vi~~~~~d~   74 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDPTR---VSDLEKANVRGARAVIVNLESDS   74 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCTTS---HHHHHHTTCTTCSEEEECCSSHH
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-cccCC---HHHHHHhhhhcCcEEEEeccchh
Confidence            5788899999998777664  44 567788899998888888876543 22222   23344433347888887776543


Q ss_pred             ---HHHHHHHHhcCCCcEEEEE
Q 019414          239 ---NMISAFECVHDGWGVAVLV  257 (341)
Q Consensus       239 ---~~~~~~~~l~~~~g~~v~~  257 (341)
                         .+....+.+.|. .+++..
T Consensus        75 ~n~~~~~~~r~~~~~-~~iia~   95 (129)
T d2fy8a1          75 ETIHCILGIRKIDES-VRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHHCSS-SCEEEE
T ss_pred             hhHHHHHHHHHHCCC-ceEEEE
Confidence               233444556665 554444

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=86.70  E-value=0.8  Score=36.75  Aligned_cols=103  Identities=20%  Similarity=0.110  Sum_probs=61.9

Q ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCceecCCCCCChhHHHHHHHHh
Q 019414          148 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMT  223 (341)
Q Consensus       148 l~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~vv~~~~~~~~~~~~i~~~~  223 (341)
                      +.....+.+..+||=+|+|. |..++.+++...-.++++++.+ +..+.+    .+.+...-+.....|  +    .+..
T Consensus        72 ~~~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D--~----~~~~  143 (253)
T d1tw3a2          72 PAAAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGD--F----FEPL  143 (253)
T ss_dssp             HHHHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECC--T----TSCC
T ss_pred             HHhhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcccc--c----hhhc
Confidence            34555677888999888763 7788889988753388888864 333333    334432111111111  1    0111


Q ss_pred             cCCccEEEecc-----CCh---HHHHHHHHHhcCCCcEEEEEcc
Q 019414          224 NGGVDRSVECT-----GNI---DNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       224 ~~~~d~vld~~-----g~~---~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      +.++|+|+-..     ..+   ..++++.+.|+|+ |++++...
T Consensus       144 ~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         144 PRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             ccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            23689987321     112   3478899999998 99998764

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.70  E-value=0.48  Score=33.48  Aligned_cols=35  Identities=23%  Similarity=0.334  Sum_probs=30.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .+.+++|+|+|.+|+=++..+..+|. +|..+.+++
T Consensus        31 ~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            35789999999999999999999998 888887654

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=86.60  E-value=0.31  Score=40.55  Aligned_cols=32  Identities=28%  Similarity=0.323  Sum_probs=28.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      .|+|+|+|..|++++..++..|. .|++.++.+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCC
Confidence            47899999999999999999999 888898764

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=86.50  E-value=1.1  Score=38.59  Aligned_cols=55  Identities=22%  Similarity=0.169  Sum_probs=41.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCceecC
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVN  207 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vv~  207 (341)
                      +++++.+|+-..+|+.|++.+..|+.+|.+-++++..  +++|.+.++.+|++.+..
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            5677876554567999999999999999954444433  557788899999986543

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=86.44  E-value=0.7  Score=34.63  Aligned_cols=76  Identities=18%  Similarity=0.307  Sum_probs=54.3

Q ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          155 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       155 ~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      -.|.+|+|+|- ..+|.-+..++...|+ .|+.+.+....                     ..+.+++     .|+++-+
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t~~---------------------l~~~~~~-----ADivI~a   87 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFTKN---------------------LRHHVEN-----ADLLIVA   87 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSCSC---------------------HHHHHHH-----CSEEEEC
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhc-cccccccccch---------------------hHHHHhh-----hhHhhhh
Confidence            46899999996 6899999999999999 78777543322                     2222322     7899999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          234 TGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       234 ~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      +|.+..+..  ..++++ ..++.+|..
T Consensus        88 ~G~p~~i~~--~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          88 VGKPGFIPG--DWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             SCCTTCBCT--TTSCTT-CEEEECCCE
T ss_pred             ccCcccccc--cccCCC-cEEEecCce
Confidence            887665543  356786 888888753

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.37  E-value=0.33  Score=38.16  Aligned_cols=31  Identities=29%  Similarity=0.361  Sum_probs=26.8

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|+.|+.++..|..+|. +|+.++..+
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            6889999999999999999999 888887654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.22  E-value=0.45  Score=39.27  Aligned_cols=33  Identities=30%  Similarity=0.422  Sum_probs=29.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  189 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~  189 (341)
                      .|.+|+|.|.|.+|..+++.+...|+ +|+++..
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVGE   67 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEc
Confidence            57899999999999999999999999 8887753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.20  E-value=0.7  Score=35.30  Aligned_cols=87  Identities=20%  Similarity=0.267  Sum_probs=56.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .|.++.|+|.|.+|...+++++.+|. +|++.++...+... ...+...      .+  +.+.+.+     .|+|+-++.
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~------~~--l~ell~~-----sDiv~~~~P  107 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL------LS--LDDLLAR-----ADFISVHLP  107 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE------CC--HHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee------cc--HHHHHhh-----CCEEEEcCC
Confidence            57789999999999999999999998 99999876554433 3344321      11  4333333     678776544


Q ss_pred             -ChHH---H-HHHHHHhcCCCcEEEEEc
Q 019414          236 -NIDN---M-ISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 -~~~~---~-~~~~~~l~~~~g~~v~~g  258 (341)
                       ++++   + ...++.++++ ..++-++
T Consensus       108 lt~~T~~lin~~~l~~mk~~-a~lIN~s  134 (184)
T d1ygya1         108 KTPETAGLIDKEALAKTKPG-VIIVNAA  134 (184)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECS
T ss_pred             CCchhhhhhhHHHHhhhCCC-ceEEEec
Confidence             2221   1 2556667775 6666665

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=86.05  E-value=0.37  Score=38.04  Aligned_cols=31  Identities=35%  Similarity=0.396  Sum_probs=27.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|+.|+.++..|..+|. +|+.+++.+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            6888999999999999999999 888887654

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.90  E-value=0.3  Score=40.75  Aligned_cols=31  Identities=29%  Similarity=0.398  Sum_probs=27.5

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|..|+.++..++..|. +|+++++++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7889999999999999999999 899998654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=85.80  E-value=0.66  Score=35.54  Aligned_cols=89  Identities=13%  Similarity=0.056  Sum_probs=56.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+.++.|+|.|.+|...+++++.+|. .|+..++........++.+.....   +    +.+.+     ...|+|+-+..
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~~---~----l~~~l-----~~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWHA---T----REDMY-----PVCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEECS---S----HHHHG-----GGCSEEEECSC
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeeccccccccccccccccC---C----HHHHH-----Hhccchhhccc
Confidence            57899999999999999999999999 899998776555555555543211   1    22221     12677765443


Q ss_pred             -ChH----HHHHHHHHhcCCCcEEEEEc
Q 019414          236 -NID----NMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 -~~~----~~~~~~~~l~~~~g~~v~~g  258 (341)
                       +++    .-...++.++++ ..++.++
T Consensus       110 lt~~T~~li~~~~l~~mk~g-a~lIN~a  136 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRG-AYIVNTA  136 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred             ccccchhhhHHHHHHhCCCC-CEEEecC
Confidence             211    123556666665 5555554

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.62  E-value=0.38  Score=37.51  Aligned_cols=30  Identities=27%  Similarity=0.335  Sum_probs=26.8

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      |+|+|+|+.|+.++..|...|. +|+.++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7888999999999999999998 88888764

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.61  E-value=0.39  Score=36.84  Aligned_cols=32  Identities=19%  Similarity=0.131  Sum_probs=27.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      ..|+|+|+|+.|+.++..|.+.|. +++.++..
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            468999999999999998999999 77777643

>d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.60  E-value=2  Score=35.09  Aligned_cols=45  Identities=24%  Similarity=0.199  Sum_probs=35.2

Q ss_pred             EEE-CCCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCcee
Q 019414          161 AVF-GLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDF  205 (341)
Q Consensus       161 lI~-G~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~v  205 (341)
                      +|. .+|+.|++++..++.+|.+-++.+..  ++.|.+.++.+|++.+
T Consensus        58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~  105 (293)
T d1o58a_          58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELV  105 (293)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred             eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEE
Confidence            444 66999999999999999865555543  5678888999999754

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=85.55  E-value=0.57  Score=35.17  Aligned_cols=97  Identities=27%  Similarity=0.327  Sum_probs=57.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHHHHcCCce--------------ecC------CCCCChhHH
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGVTD--------------FVN------TSEHDRPIQ  216 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~--~~~~~~~~~g~~~--------------vv~------~~~~~~~~~  216 (341)
                      +|.|.|-|-+|+++...+....--.++++-...  +.+..+-++.-.+              +++      +.+.+    
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~----   78 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD----   78 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS----
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC----
Confidence            478889999999999988765422677765432  2233333321110              010      11111    


Q ss_pred             HHHHHHhc-C-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCCC
Q 019414          217 EVIAEMTN-G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  262 (341)
Q Consensus       217 ~~i~~~~~-~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~  262 (341)
                        ..++.. + ++|+|+||+|.....+.+..++..+ .+=|++..+..
T Consensus        79 --p~~i~W~~~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP~~  123 (166)
T d1gado1          79 --PANLKWDEVGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGPSK  123 (166)
T ss_dssp             --GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCS
T ss_pred             --hHHCCccccCCCEEEEccccccCHHHHHHHhcCC-CceEEeecccc
Confidence              111111 2 7999999999877788888899887 55555554433

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=85.22  E-value=0.91  Score=33.36  Aligned_cols=39  Identities=13%  Similarity=0.089  Sum_probs=32.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  194 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~  194 (341)
                      |..+|.|+|+|.+|...+.++...+...++..+.++++.
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            456899999999999888888888888999998877653

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=85.20  E-value=0.42  Score=38.60  Aligned_cols=31  Identities=19%  Similarity=0.138  Sum_probs=27.2

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|.+|+.++.-+...|. +|+++++.+
T Consensus         7 vvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            8899999999998888888898 899998754

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.17  E-value=0.84  Score=37.08  Aligned_cols=103  Identities=12%  Similarity=-0.006  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHH----c-CC-CEEEEEcCChhhHHHHHHcCC-----c-eecCCCCCChhHHH---
Q 019414          153 KPERGSSVAVFGLGAVGLAAAEGARI----A-GA-SRIIGVDRSSKRFEEAKKFGV-----T-DFVNTSEHDRPIQE---  217 (341)
Q Consensus       153 ~~~~g~~vlI~G~g~~G~~a~~la~~----~-g~-~~vv~v~~~~~~~~~~~~~g~-----~-~vv~~~~~~~~~~~---  217 (341)
                      ..++.-+||=+|+|. |..+..+++.    . +. ..+++++.+++..+.+++.-.     . ..++.....  +.+   
T Consensus        37 ~~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~  113 (280)
T d1jqea_          37 DTKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKET--SSEYQS  113 (280)
T ss_dssp             TTCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSC--HHHHHH
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhh--hhhhcc
Confidence            445555788888643 4444444432    2 22 167899999988887765311     1 111222221  221   


Q ss_pred             HHHHH-hcCCccEEEecc-----CC-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          218 VIAEM-TNGGVDRSVECT-----GN-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       218 ~i~~~-~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      ..... .++.||+|+-.-     .. ...+..+.++|+|+ |.+++...
T Consensus       114 ~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         114 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence            11112 223799987532     12 35788999999998 98877654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=85.15  E-value=0.43  Score=39.29  Aligned_cols=32  Identities=25%  Similarity=0.398  Sum_probs=26.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          159 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      .|+|+|+|.+|++++.-+...|.++|++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            48999999999988777767887579889865

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.13  E-value=4.6  Score=29.82  Aligned_cols=91  Identities=15%  Similarity=0.090  Sum_probs=50.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHc--CCC-EEEEEcCChhh---------------HHHHHHcCCceecCCCCCChhHHHHHH
Q 019414          159 SVAVFGLGAVGLAAAEGARIA--GAS-RIIGVDRSSKR---------------FEEAKKFGVTDFVNTSEHDRPIQEVIA  220 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~--g~~-~vv~v~~~~~~---------------~~~~~~~g~~~vv~~~~~~~~~~~~i~  220 (341)
                      +|.|+|.|.+|...+++....  +.. +++++..+...               .+..+....      ....  ......
T Consensus         6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~   77 (168)
T d1ebfa1           6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTT------KTLP--LDDLIA   77 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCC------BCCC--HHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhccc------cccc--HHHHHH
Confidence            467889999999998877644  221 55555433211               111111111      0111  222222


Q ss_pred             HHhcC-CccEEEeccCChHHHHHHHHHhcCCCcEEEEEc
Q 019414          221 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       221 ~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      ..... ..++++||.++.+..+...+.+..+ -++|..+
T Consensus        78 ~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G-~hVVTAN  115 (168)
T d1ebfa1          78 HLKTSPKPVILVDNTSSAYIAGFYTKFVENG-ISIATPN  115 (168)
T ss_dssp             HHTTCSSCEEEEECSCCHHHHTTHHHHHHTT-CEEECCC
T ss_pred             HhccCCCceEEEEecCChHHHHHHHHHHHcC-CeEEecC
Confidence            22223 6789999999977776777778775 5555554

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.05  E-value=0.31  Score=40.93  Aligned_cols=31  Identities=29%  Similarity=0.396  Sum_probs=25.0

Q ss_pred             EEEECCCHHHHHHHHHHH-----HcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGAR-----IAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~-----~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|.+|++++.++.     ..|+ +|+.+++++
T Consensus        10 V~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            789999999999776663     4688 888888754

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.91  E-value=0.33  Score=40.29  Aligned_cols=31  Identities=13%  Similarity=0.351  Sum_probs=27.7

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|||..|+.++..+...|. +|.+++.++
T Consensus         4 v~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           4 YIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             EEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            7899999999999999888898 899998765

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=84.84  E-value=0.48  Score=37.34  Aligned_cols=95  Identities=14%  Similarity=0.025  Sum_probs=57.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHH-hcCCccEE
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM-TNGGVDRS  230 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~-~~~~~d~v  230 (341)
                      .+.-++.+||=+|+|. |..+..+++ .|. +|++++.+++..+.+++...+.+- ....+  +    ... .++.||+|
T Consensus        16 ~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~-~~~~~--~----~~~~~~~~fD~I   85 (225)
T d2p7ia1          16 TPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGIT-YIHSR--F----EDAQLPRRYDNI   85 (225)
T ss_dssp             GGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEE-EEESC--G----GGCCCSSCEEEE
T ss_pred             hhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccc-ccccc--c----cccccccccccc
Confidence            3445577899898754 666655654 476 899999999999998875332211 00111  1    111 12479998


Q ss_pred             Eec-----cCCh-HHHHHHH-HHhcCCCcEEEEE
Q 019414          231 VEC-----TGNI-DNMISAF-ECVHDGWGVAVLV  257 (341)
Q Consensus       231 ld~-----~g~~-~~~~~~~-~~l~~~~g~~v~~  257 (341)
                      +-.     +..+ ..+..+. ++|+|+ |.++..
T Consensus        86 ~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          86 VLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             cccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            732     1122 2355665 578997 888765

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.73  E-value=0.46  Score=37.01  Aligned_cols=30  Identities=40%  Similarity=0.412  Sum_probs=26.8

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      ++|+|+|+.|+.++..|..+|. +|+.++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6788999999999999999998 88888764

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=84.71  E-value=1.7  Score=35.30  Aligned_cols=97  Identities=16%  Similarity=0.193  Sum_probs=64.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHHHH-hcC
Q 019414          152 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM-TNG  225 (341)
Q Consensus       152 ~~~~~g~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~~~-~~~  225 (341)
                      .++.++.+||=+|+| .|..+..+++..+. .+|++++.+++..+.+++    .+...-+..  .+  +    .+. .++
T Consensus        23 ~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~--~d--~----~~~~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYGCG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLE--GD--A----TEIELND   93 (281)
T ss_dssp             SCCCSCCEEEEETCT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEE--SC--T----TTCCCSS
T ss_pred             hccCCcCEEEEecCc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccc--cc--c----ccccccC
Confidence            367778899989987 37888888887642 389999999988877765    333211111  11  0    011 123


Q ss_pred             CccEEEecc-----CC-hHHHHHHHHHhcCCCcEEEEEc
Q 019414          226 GVDRSVECT-----GN-IDNMISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       226 ~~d~vld~~-----g~-~~~~~~~~~~l~~~~g~~v~~g  258 (341)
                      .||+|+-..     .. ...++++.+.|+|+ |.++...
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            799988532     22 24688999999998 9988764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=84.71  E-value=0.53  Score=38.70  Aligned_cols=37  Identities=27%  Similarity=0.323  Sum_probs=30.7

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019414          156 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKR  193 (341)
Q Consensus       156 ~g~~vlI~G~-g--~~G~~a~~la~~~g~~~vv~v~~~~~~  193 (341)
                      +|.++||+|+ |  ++|.+.++.+...|+ +|+.+.++++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence            5788999996 4  899999999999999 88888766543

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.54  E-value=0.46  Score=39.23  Aligned_cols=31  Identities=35%  Similarity=0.580  Sum_probs=27.3

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|..|+.++.-|...|+ +|+.+++..
T Consensus        19 VlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            7999999999999988889999 889888653

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.25  E-value=2.3  Score=35.25  Aligned_cols=104  Identities=21%  Similarity=0.321  Sum_probs=62.9

Q ss_pred             hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHH----HHcCCceecCCCCCChhHHHHHHHHhc
Q 019414          150 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTN  224 (341)
Q Consensus       150 ~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~----~~~g~~~vv~~~~~~~~~~~~i~~~~~  224 (341)
                      ....+++|++||=.-+++ |-=+.+++...+ -..+++.+.+++|...+    +.+|...++...+....+     ....
T Consensus       110 ~~l~~~~g~~vlD~CAap-GgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~-----~~~~  183 (313)
T d1ixka_         110 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHI-----GELN  183 (313)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGG-----GGGC
T ss_pred             hcccCCccceeeecccch-hhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhcccccccccccc-----cccc
Confidence            345789999987763322 222344454443 23799999999997654    457776554333322111     1223


Q ss_pred             CCccEEE-e--ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          225 GGVDRSV-E--CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       225 ~~~d~vl-d--~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ..||.|+ |  |+|.                         .+.+..+++.++++ |++|..-..
T Consensus       184 ~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYsTCS  246 (313)
T d1ixka_         184 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTCS  246 (313)
T ss_dssp             CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             ccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEeecc
Confidence            4788876 6  4543                         13567788889997 888877654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.21  E-value=0.4  Score=36.11  Aligned_cols=27  Identities=30%  Similarity=0.486  Sum_probs=24.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGAS  182 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~  182 (341)
                      .+++|+|+|+|.+|.-++..++.+|.+
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~   28 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWE   28 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCc
Confidence            468999999999999999999999984

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=84.12  E-value=2.2  Score=35.47  Aligned_cols=37  Identities=24%  Similarity=0.269  Sum_probs=30.6

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhh
Q 019414          156 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR  193 (341)
Q Consensus       156 ~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~  193 (341)
                      +-.+|+|+|+ |.+|...+..+...|+ .|+++.|+.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~   39 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKG   39 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcch
Confidence            3467999987 9999999999999999 77778776554

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.41  E-value=1.5  Score=32.95  Aligned_cols=95  Identities=18%  Similarity=0.267  Sum_probs=61.9

Q ss_pred             hhccccchhhhhhhhhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCC
Q 019414          135 CILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD  212 (341)
Q Consensus       135 a~l~~~~~ta~~~l~~~~~~-~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~  212 (341)
                      +.+||+....+.. ++.-++ -.|.+|+|+|. ..+|.-++.++...|+ .|+.+.+.....                  
T Consensus        17 ~~~PcTp~aii~l-L~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~l------------------   76 (170)
T d1a4ia1          17 CFIPCTPKGCLEL-IKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAHL------------------   76 (170)
T ss_dssp             CCCCHHHHHHHHH-HHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSSH------------------
T ss_pred             CCCCChHHHHHHH-HHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccccH------------------
Confidence            3455544433333 344444 37899999996 7899999999999999 888875433222                  


Q ss_pred             hhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccC
Q 019414          213 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       213 ~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                         .+.+     ...|+++-++|.+..+..  ..++++ ..++.+|..
T Consensus        77 ---~~~~-----~~aDivi~a~G~~~~i~~--~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          77 ---DEEV-----NKGDILVVATGQPEMVKG--EWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             ---HHHH-----TTCSEEEECCCCTTCBCG--GGSCTT-CEEEECCCB
T ss_pred             ---HHHH-----hhccchhhcccccccccc--ccccCC-CeEeccCcc
Confidence               1111     137888888887655443  367886 888888753

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=83.40  E-value=0.55  Score=38.03  Aligned_cols=30  Identities=33%  Similarity=0.441  Sum_probs=26.5

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      |+|+|+|.+|+.++.-+...|. +|+++++.
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            7899999999998888888898 89999864

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.39  E-value=0.45  Score=37.51  Aligned_cols=30  Identities=30%  Similarity=0.382  Sum_probs=26.8

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  190 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~  190 (341)
                      |+|+|+|+.|+.++..|..+|. +|..++..
T Consensus         6 viVIG~GpaGl~aA~~aa~~G~-kV~viE~~   35 (235)
T d1h6va1           6 LIIIGGGSGGLAAAKEAAKFDK-KVMVLDFV   35 (235)
T ss_dssp             EEEECCSHHHHHHHHHHGGGCC-CEEEECCC
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7889999999999999999999 88888743

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.09  E-value=1.6  Score=36.40  Aligned_cols=30  Identities=27%  Similarity=0.199  Sum_probs=26.4

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  188 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~  188 (341)
                      ++|||+|+ |-+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            58999987 9999999999988998 888875

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=82.83  E-value=0.89  Score=35.12  Aligned_cols=50  Identities=28%  Similarity=0.337  Sum_probs=35.7

Q ss_pred             hhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC
Q 019414          149 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  201 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g  201 (341)
                      ....++ .|.+||=.|+|. |.+++. |..+|+..|++++.+++..+.+++.-
T Consensus        42 ~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~   91 (197)
T d1ne2a_          42 YNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNC   91 (197)
T ss_dssp             HHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHC
T ss_pred             HHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHcc
Confidence            344455 589999988753 444433 44578779999999999999888743

>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Escherichia coli [TaxId: 562]

Probab=82.81  E-value=1.4  Score=29.55  Aligned_cols=25  Identities=40%  Similarity=0.543  Sum_probs=20.1

Q ss_pred             cceEEEEEecCCCC---------CCCCCCEEEec
Q 019414           32 EAAGVVESVGEGVS---------DLEVGDHVLPV   56 (341)
Q Consensus        32 e~~G~V~~vG~~v~---------~~~~Gd~V~~~   56 (341)
                      ...|+|+.+|++..         .+++||+|+..
T Consensus        35 ~~~g~VvavG~g~~~~~g~~~~~~vk~GD~Vl~~   68 (97)
T d1aono_          35 STRGEVLAVGNGRILENGEVKPLDVKVGDIVIFN   68 (97)
T ss_dssp             CCEEEEEEECSBCCTTSSCCCBCSCCTTCEEEEC
T ss_pred             ceeEEEEEEeeeEEccCCcCccccCCCCCEEEEe
Confidence            45699999998653         38999999965

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=82.72  E-value=2.5  Score=32.24  Aligned_cols=107  Identities=18%  Similarity=0.191  Sum_probs=61.8

Q ss_pred             hhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCc-eecCCCCCChhHHHHHHHH
Q 019414          149 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT-DFVNTSEHDRPIQEVIAEM  222 (341)
Q Consensus       149 ~~~~~~~~g~~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~-~vv~~~~~~~~~~~~i~~~  222 (341)
                      +....+++++.+ |-++ |. |-.+..+++...-.+|++++.+++..+.+++.    +.. ..+..+-.  ++...+...
T Consensus        16 i~~l~~~~~~~~-lD~t~G~-Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~--~~~~~~~~~   91 (192)
T d1m6ya2          16 IEFLKPEDEKII-LDCTVGE-GGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR--EADFLLKTL   91 (192)
T ss_dssp             HHHHCCCTTCEE-EETTCTT-SHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG--GHHHHHHHT
T ss_pred             HHhhCCCCCCEE-EEecCCC-cHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh--hHHHHHHHc
Confidence            345577888865 4443 43 33444555555334999999999999888763    221 12222111  144444444


Q ss_pred             hcCCccEEE-eccCC--------------hHHHHHHHHHhcCCCcEEEEEccC
Q 019414          223 TNGGVDRSV-ECTGN--------------IDNMISAFECVHDGWGVAVLVGVP  260 (341)
Q Consensus       223 ~~~~~d~vl-d~~g~--------------~~~~~~~~~~l~~~~g~~v~~g~~  260 (341)
                      ..+.+|.|+ |.--+              .+.+..+++.+.++ |+++.+...
T Consensus        92 ~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f~  143 (192)
T d1m6ya2          92 GIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISFH  143 (192)
T ss_dssp             TCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEESS
T ss_pred             CCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeeccc
Confidence            345899875 53211              13566777778887 887776543

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.59  E-value=7.7  Score=28.89  Aligned_cols=86  Identities=20%  Similarity=0.302  Sum_probs=58.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      ++.+|.|+|=|+-|++-++=+|-.|...+++.....+..+.+++-|.+..-        +.+..+     ..|+|+--+.
T Consensus        15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~--------~~eA~~-----~aDiim~L~P   81 (182)
T d1np3a2          15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVAD--------VKTAVA-----AADVVMILTP   81 (182)
T ss_dssp             HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEEC--------HHHHHH-----TCSEEEECSC
T ss_pred             CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhcccccc--------HHHHhh-----hcCeeeeecc
Confidence            467899999999999999999999996677775555567788888875321        444443     3789987775


Q ss_pred             ChHHHHHHH-----HHhcCCCcEEEE
Q 019414          236 NIDNMISAF-----ECVHDGWGVAVL  256 (341)
Q Consensus       236 ~~~~~~~~~-----~~l~~~~g~~v~  256 (341)
                      . +.....|     ..|+++ ..+.+
T Consensus        82 D-~~q~~vy~~~I~p~lk~g-~~L~F  105 (182)
T d1np3a2          82 D-EFQGRLYKEEIEPNLKKG-ATLAF  105 (182)
T ss_dssp             H-HHHHHHHHHHTGGGCCTT-CEEEE
T ss_pred             h-HHHHHHHHHhhhhhcCCC-cEEEE
Confidence            4 4433444     345564 44433

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=82.29  E-value=0.61  Score=37.84  Aligned_cols=60  Identities=27%  Similarity=0.363  Sum_probs=35.8

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcC-CccEEEeccC
Q 019414          159 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  235 (341)
Q Consensus       159 ~vlI~G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~-~~d~vld~~g  235 (341)
                      +|||+|+ |-+|...+..+...|.  ++++..+...      +    ..|..+.     +.+.+...+ ++|+||++.+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~~~~------~----~~Dl~~~-----~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVHSKE------F----CGDFSNP-----KGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE--EEEECTTCSS------S----CCCTTCH-----HHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC--EEEEECCCcc------c----cCcCCCH-----HHHHHHHHHcCCCEEEEecc
Confidence            5899987 9999998887776664  5555444321      1    1122221     123332233 6899999876

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=82.22  E-value=0.97  Score=33.94  Aligned_cols=94  Identities=23%  Similarity=0.346  Sum_probs=56.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHc---CCCEEEEEcC--ChhhHHHHHHcCCce--------------ecC------CCCCC-
Q 019414          159 SVAVFGLGAVGLAAAEGARIA---GASRIIGVDR--SSKRFEEAKKFGVTD--------------FVN------TSEHD-  212 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~---g~~~vv~v~~--~~~~~~~~~~~g~~~--------------vv~------~~~~~-  212 (341)
                      +|.|.|-|-+|+++.+.+...   .. .|+++-.  +.+.+..+-++.-.+              +++      +...+ 
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            688999999999999877643   35 6677633  334444444332110              010      01111 


Q ss_pred             --hhHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcCCCcEEEEEccCC
Q 019414          213 --RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  261 (341)
Q Consensus       213 --~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~~g~~v~~g~~~  261 (341)
                        -+|.    +   -++|+|+||+|.....+.+..++..+ .+=|++..+.
T Consensus        81 ~~i~W~----~---~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~  123 (169)
T d1hdgo1          81 SKLPWK----D---LGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPA  123 (169)
T ss_dssp             GGSCHH----H---HTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             hhCCcc----c---cCCCEEEEecceeccccchhhhccCC-CceEEEeccc
Confidence              0121    1   17999999999877788888899886 5445554443

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.20  E-value=0.6  Score=38.84  Aligned_cols=31  Identities=42%  Similarity=0.625  Sum_probs=27.0

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|..|+.++.-|...|+ +|+.+++..
T Consensus        22 VvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~~   52 (317)
T d1qo8a2          22 VLVVGAGSAGFNASLAAKKAGA-NVILVDKAP   52 (317)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            7889999999999988888999 888887643

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=81.96  E-value=0.4  Score=39.10  Aligned_cols=31  Identities=29%  Similarity=0.422  Sum_probs=25.8

Q ss_pred             EEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAE-GARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~-la~~~g~~~vv~v~~~~  191 (341)
                      |+|+|+|..|+.++. +|+..|+ +|+.+++.+
T Consensus        36 ViVIGaGpaGL~aA~~LA~~~G~-~V~vlE~~~   67 (278)
T d1rp0a1          36 VVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV   67 (278)
T ss_dssp             EEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHHccCC-eEEEEecCC
Confidence            899999999998765 5666799 999998765

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=81.86  E-value=7.3  Score=28.08  Aligned_cols=44  Identities=25%  Similarity=0.317  Sum_probs=29.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  202 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~  202 (341)
                      ++|.++|.|.+|...+.-+...|. .++.-+..++..+..++.+.
T Consensus         1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~~~~~~~~~~~~~~~~~~   44 (156)
T d2cvza2           1 EKVAFIGLGAMGYPMAGHLARRFP-TLVWNRTFEKALRHQEEFGS   44 (156)
T ss_dssp             CCEEEECCSTTHHHHHHHHHTTSC-EEEECSSTHHHHHHHHHHCC
T ss_pred             CeEEEEeHHHHHHHHHHHHHhCCC-EEEEeCCHHHHHHHHHHcCC
Confidence            568899999999888777766676 55544444444455555443

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.73  E-value=2.9  Score=30.17  Aligned_cols=74  Identities=19%  Similarity=0.156  Sum_probs=44.8

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCCceecCCCC--CChhHHHHHHHHhcCCccEEEec
Q 019414          158 SSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSE--HDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       158 ~~vlI~G~-g~~G~~a~~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~vv~~~~--~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      .+|.|+|+ |.+|...+.++...+. ..++.++.++.+-+.+.-..+........  ...+..+.+     .+.|+|+-+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~-----~~aDivVit   75 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL-----KGCDVVVIP   75 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH-----TTCSEEEEC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHh-----CCCCEEEEC
Confidence            36899996 9999999988888875 68999988776544332222221110000  001122222     358999988


Q ss_pred             cCC
Q 019414          234 TGN  236 (341)
Q Consensus       234 ~g~  236 (341)
                      .|.
T Consensus        76 ag~   78 (144)
T d1mlda1          76 AGV   78 (144)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            874

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.65  E-value=0.58  Score=36.74  Aligned_cols=97  Identities=16%  Similarity=0.172  Sum_probs=55.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCceecCCCCCChhHHHHHHH---Hhc-CC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAE---MTN-GG  226 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g-~~~vv~v~~~~~~~~~~~----~~g~~~vv~~~~~~~~~~~~i~~---~~~-~~  226 (341)
                      +..+||=+|++ .|..++.+|+.+. -.+|++++.+++..+.++    ..|...-+.....+  ..+.+.+   ... +.
T Consensus        56 kpk~ILEiGt~-~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd--~~e~l~~l~~~~~~~~  132 (214)
T d2cl5a1          56 SPSLVLELGAY-CGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGA--SQDLIPQLKKKYDVDT  132 (214)
T ss_dssp             CCSEEEEECCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHGGGHHHHSCCCC
T ss_pred             CCCEEEEEccC-chhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecc--ccccccchhhcccccc
Confidence            44688889864 2566777887653 239999999998777654    45654322222222  3333322   222 37


Q ss_pred             ccEEE-eccCChH----HHHHHHHHhcCCCcEEEE
Q 019414          227 VDRSV-ECTGNID----NMISAFECVHDGWGVAVL  256 (341)
Q Consensus       227 ~d~vl-d~~g~~~----~~~~~~~~l~~~~g~~v~  256 (341)
                      +|.+| |..-...    .+...++.++|+ |.++.
T Consensus       133 ~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv~  166 (214)
T d2cl5a1         133 LDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLLA  166 (214)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEEE
T ss_pred             cceeeecccccccccHHHHHHHhCccCCC-cEEEE
Confidence            99886 5322211    234455678896 76543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.65  E-value=1  Score=34.43  Aligned_cols=85  Identities=14%  Similarity=0.169  Sum_probs=54.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEeccC
Q 019414          156 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  235 (341)
Q Consensus       156 ~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~~g  235 (341)
                      .+.+|.|+|.|.+|...+++++.+|. +|+..++.....       ........  +  +.+.++.     .|+++-++.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~~--~--l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQVQ--H--LSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEECS--C--HHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhhh--h--HHHHHhh-----ccceeeccc
Confidence            57799999999999999999999999 899997654321       00111111  1  4433332     578776554


Q ss_pred             -ChHH----HHHHHHHhcCCCcEEEEEc
Q 019414          236 -NIDN----MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       236 -~~~~----~~~~~~~l~~~~g~~v~~g  258 (341)
                       .+++    -.+.++.++++ ..++.++
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~a  132 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPG-SLLINAS  132 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTT-EEEEECS
T ss_pred             CCcchhhhccHHHHhhCCCC-CEEEEcC
Confidence             2221    24567777776 7776665

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=81.63  E-value=2.4  Score=34.90  Aligned_cols=96  Identities=18%  Similarity=0.088  Sum_probs=60.4

Q ss_pred             EEEC-CCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCceecCCCCCChh-----------------------
Q 019414          161 AVFG-LGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEHDRP-----------------------  214 (341)
Q Consensus       161 lI~G-~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vv~~~~~~~~-----------------------  214 (341)
                      +|.+ +|+.|.+++..|+.+|.+-++.+..  ++++.+.++.+|++.+......+..                       
T Consensus        72 vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~a~~~a~~~g~~~~~~~~~~~  151 (318)
T d1v71a1          72 VLTFSSGNHAQAIALSAKILGIPAKIIMPLDAPEAKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIPPYDHPH  151 (318)
T ss_dssp             EEECCSSHHHHHHHHHHHHTTCCEEEEEETTCCHHHHHHHHHTTCEEEEECTTTTCHHHHHHHHHHHHTCBCCCSSSSHH
T ss_pred             eeeeccchhhHHHHHhhcccccceeecccccccHHHHHHHHHcCCcEEeccCCchHHHHHHHHHHHhcCCEecCCccccc
Confidence            4554 5999999999999999875555543  5677888999999765422221100                       


Q ss_pred             -------HHHHHHHHhcCCccEEEeccCChHH---HHHHHHHhcCCCcEEEEEc
Q 019414          215 -------IQEVIAEMTNGGVDRSVECTGNIDN---MISAFECVHDGWGVAVLVG  258 (341)
Q Consensus       215 -------~~~~i~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~~g~~v~~g  258 (341)
                             ...++.+.. +.+|++|-++|+..+   +...++...+. .+++.+.
T Consensus       152 ~~~g~~t~~~Ei~~q~-~~~d~vvv~~G~GG~~~Gi~~~~~~~~~~-~~ii~v~  203 (318)
T d1v71a1         152 VLAGQGTAAKELFEEV-GPLDALFVCLGGGGLLSGSALAARHFAPN-CEVYGVE  203 (318)
T ss_dssp             HHHHHTHHHHHHHHHH-CCCSEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             cccccchHHHHHHHhc-CCCCEEEEcCCchHHHHHHHHHHHhhCCC-ceeeccc
Confidence                   111111111 247999988887544   34556666776 7777664

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=81.51  E-value=1.2  Score=36.04  Aligned_cols=29  Identities=28%  Similarity=0.367  Sum_probs=24.4

Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Q 019414          160 VAVFGL-GAVGLAAAEGARIAGASRIIGVD  188 (341)
Q Consensus       160 vlI~G~-g~~G~~a~~la~~~g~~~vv~v~  188 (341)
                      |||+|+ |-+|...+.-+...|..+|++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d   31 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVD   31 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEE
Confidence            789987 99999998888877975788875

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.26  E-value=0.85  Score=35.70  Aligned_cols=33  Identities=18%  Similarity=0.201  Sum_probs=26.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCChh
Q 019414          159 SVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSK  192 (341)
Q Consensus       159 ~vlI~G~g~~G~~a~~la~~~--g~~~vv~v~~~~~  192 (341)
                      +|+|+|+|+.|+.+++.++..  |+ .|++.++.+.
T Consensus         3 kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLV   37 (230)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred             eEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence            799999999999998866544  66 8888877653

>d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: L-serine dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.96  E-value=6.8  Score=31.98  Aligned_cols=47  Identities=34%  Similarity=0.284  Sum_probs=35.7

Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC--ChhhHHHHHHcCCceec
Q 019414          160 VAVFG-LGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFV  206 (341)
Q Consensus       160 vlI~G-~g~~G~~a~~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~vv  206 (341)
                      -+|.. +|+.|.+.+..|+.+|.+-++.+..  +++|.+.++.+|+..+.
T Consensus        56 ~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~v~~  105 (319)
T d1p5ja_          56 HFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKV  105 (319)
T ss_dssp             EEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEE
T ss_pred             EEEEeCCCcHHHHHHHHhhhccccceeccccccccccccccccceecccc
Confidence            45565 5999999999999999965555544  44778888889987654

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=80.74  E-value=1.4  Score=31.25  Aligned_cols=60  Identities=10%  Similarity=-0.052  Sum_probs=44.6

Q ss_pred             hhcCCCCCCEEEEE-CC-CHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCC
Q 019414          150 NVAKPERGSSVAVF-GL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  209 (341)
Q Consensus       150 ~~~~~~~g~~vlI~-G~-g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~  209 (341)
                      ..+++..-+.+++. +. -..-.++...++..+..++++-..+.+..+.++++|++.++++.
T Consensus        58 ~~a~i~~a~~vi~~~~~~~~~~~~~~~~~~~~~~~~iiar~~~~~~~~~l~~~Gad~vi~p~  119 (134)
T d2hmva1          58 LSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPE  119 (134)
T ss_dssp             HHHTGGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHTCSEEECHH
T ss_pred             hccCCccccEEEEEcCchHHhHHHHHHHHHHcCCCcEEeecccHhHHHHHHHCCCCEEEChH
Confidence            44556555666554 54 35556667777888877999998999999999999999998664

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=80.56  E-value=1.3  Score=33.92  Aligned_cols=90  Identities=23%  Similarity=0.265  Sum_probs=58.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceecCCCCCChhHHHHHHHHhcCCccEEEec
Q 019414          154 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  233 (341)
Q Consensus       154 ~~~g~~vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~vv~~~~~~~~~~~~i~~~~~~~~d~vld~  233 (341)
                      +.++++||=+|+|. |..+..+      .++++++.+++..+.+++.+...+....+ +  +     ...++.||+|+-.
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~------~~~~giD~s~~~~~~a~~~~~~~~~~d~~-~--l-----~~~~~~fD~I~~~   98 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL------KIKIGVEPSERMAEIARKRGVFVLKGTAE-N--L-----PLKDESFDFALMV   98 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH------TCCEEEESCHHHHHHHHHTTCEEEECBTT-B--C-----CSCTTCEEEEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc------ceEEEEeCChhhccccccccccccccccc-c--c-----ccccccccccccc
Confidence            45677899898752 4444333      25689999999999999877654332111 1  0     0112369999853


Q ss_pred             c-----CC-hHHHHHHHHHhcCCCcEEEEEcc
Q 019414          234 T-----GN-IDNMISAFECVHDGWGVAVLVGV  259 (341)
Q Consensus       234 ~-----g~-~~~~~~~~~~l~~~~g~~v~~g~  259 (341)
                      .     .. ...++++.+.|+|+ |++++...
T Consensus        99 ~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~~  129 (208)
T d1vlma_          99 TTICFVDDPERALKEAYRILKKG-GYLIVGIV  129 (208)
T ss_dssp             SCGGGSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccchhhhhhcCCCC-ceEEEEec
Confidence            2     22 23678999999998 98887754

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.43  E-value=0.87  Score=38.06  Aligned_cols=34  Identities=24%  Similarity=0.404  Sum_probs=26.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCh
Q 019414          158 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSS  191 (341)
Q Consensus       158 ~~vlI~G~g~~G~~a~~la~~~g~-~~vv~v~~~~  191 (341)
                      .+|+|+|+|..|++++..++..|. ..|++.++++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            479999999999988766555442 3899998875

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=80.24  E-value=0.68  Score=38.59  Aligned_cols=31  Identities=29%  Similarity=0.293  Sum_probs=27.2

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 019414          160 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  191 (341)
Q Consensus       160 vlI~G~g~~G~~a~~la~~~g~~~vv~v~~~~  191 (341)
                      |||+|+|..|+.++.-|...|+ +|+.++...
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~-~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGL-STIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence            8899999999999999989999 788887643

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=80.11  E-value=1.9  Score=32.62  Aligned_cols=101  Identities=13%  Similarity=0.202  Sum_probs=57.5

Q ss_pred             hhhhcC-CCCCCEEEEE--CCCHHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceecCCCCCChhHHHHHH
Q 019414          148 TLNVAK-PERGSSVAVF--GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIA  220 (341)
Q Consensus       148 l~~~~~-~~~g~~vlI~--G~g~~G~~a~~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~vv~~~~~~~~~~~~i~  220 (341)
                      ++.... ...|.+||=.  |.|++|+-+    ...|+..|+.++.+.+..+.+++    ++...-+.....+  +.+.+.
T Consensus        32 lFn~l~~~~~~~~vLDlfaGsG~~g~ea----~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D--~~~~l~  105 (182)
T d2fhpa1          32 IFNMIGPYFDGGMALDLYSGSGGLAIEA----VSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMD--ANRALE  105 (182)
T ss_dssp             HHHHHCSCCSSCEEEETTCTTCHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHH
T ss_pred             HHHHHHHhcCCCEEEEccccccccccee----eecchhHHHHHHHHHHHHHHHHHHhhhhhccccccccccc--chhhhh
Confidence            444333 3467777766  457877743    34788899999999998887654    4543211111222  444554


Q ss_pred             HHhc-C-CccEEE-ecc-CC---hHHHHHHHH--HhcCCCcEEE
Q 019414          221 EMTN-G-GVDRSV-ECT-GN---IDNMISAFE--CVHDGWGVAV  255 (341)
Q Consensus       221 ~~~~-~-~~d~vl-d~~-g~---~~~~~~~~~--~l~~~~g~~v  255 (341)
                      .... + +||+|| |.- +.   .+.++.+.+  .+.++ |.++
T Consensus       106 ~~~~~~~~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~-giIi  148 (182)
T d2fhpa1         106 QFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNE-AVIV  148 (182)
T ss_dssp             HHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             hhcccCCCcceEEechhhhhhHHHHHHHHHHHCCCCCCC-EEEE
Confidence            4332 3 799997 431 11   234444443  36775 6554