Citrus Sinensis ID: 019415

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-
Protein Sequence
MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLPQ
Secondary Structure (PSIPRED)
ccccccccEEEEccccHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHcccccccccEEEEccccccccHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccHHHHHHHcccccHHHHHHHHHccccccccccEEEHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHccccccccccccccccccccccHHHHcccccccccHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEcccHHHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHcccccHHEEEEEccccccccHHHHHcccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcHHEEEEcccccccccccEEcccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccEEEEcccEEEcccccccccccHHHHHHHHHccccHHHHHHHHccccccccEEEEEHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHcccccccccccccccccEEEcHHHHHHcccEEEccHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mdhksnfkvcvtggegfvgSWLIKKLLDKgyivhttlrpnledkskvdllkslpgaetrLIFFeaeiydpdtfenaiqgcdfvfhvatplqhidgyLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCasplkedgsagykdsidetcytppdhpltchnEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVvagdtnlpysstpvsvIGGLCQLTNNEYVYQTLRDTEEIlgklplvhiDDVCEAHIfcmekpsmsgrffctnvFVSSAEIASCLQqnypefhikqeyldvpkreikwggtkleekgfeynYDLKMILddsikcgrksgylpq
Flexible Loop (DISEMBL)
mdhksnfkvcvtggegfvGSWLIKKLLDKGYIVHTtlrpnledkskvDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMIlddsikcgrksgylpq
Low Complexity Region (SEG)
MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSglevvalalgvvagDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLPQ
Disordered region (IsUnstruct)
******FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCG********
Disordered Region (DISOPRED)
*****NF***VTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP*
Disordered Region (DISEMBL)
MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLPQ
Disordered Region (DISPRO)
*****NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLPQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	341	2.2.26 [Sep-21-2011]
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.926	0.831	0.325	6e-41
P51102	382	Dihydroflavonol-4-reducta	no	no	0.914	0.816	0.315	6e-41
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.923	0.875	0.301	6e-40
P51103	364	Dihydroflavonol-4-reducta	N/A	no	0.953	0.892	0.295	1e-39
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.914	0.881	0.324	2e-39
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.947	0.882	0.284	5e-39
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.920	0.902	0.305	5e-39
P51108	357	Dihydroflavonol-4-reducta	N/A	no	0.923	0.882	0.308	1e-38
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.920	0.904	0.302	2e-38
P51110	337	Dihydroflavonol-4-reducta	no	no	0.912	0.922	0.307	2e-38

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  168 bits (425), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 175/335 (52%), Gaps = 19/335 (5%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  GF+GSWL+ +LL++GY VH T+R + E+K KV  L  LP A+T L  ++A++ 
Sbjct: 18  VCVTGAAGFIGSWLVMRLLERGYNVHATVR-DPENKKKVKHLLELPKADTNLTLWKADLT 76

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
              +F+ AIQGC  VFHVATP+          V++  V     I   C K+ TVKRL++T
Sbjct: 77  VEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFT 136

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S 187
           +S   A  L  D     K   D+T ++  D  +        +Y  SK+ +EK  +     
Sbjct: 137 SS---AGTL--DVQEQQKLFYDQTSWSDLDF-IYAKKMTGWMYFASKILAEKAAMEEAKK 190

Query: 188 SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHI 247
             ++ +++   +V G    P  + P S+I  L  +T NE  Y  ++  +        VH+
Sbjct: 191 KNIDFISIIPPLVVGPFITP--TFPPSLITALSLITGNEAHYCIIKQGQ-------YVHL 241

Query: 248 DDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKR--EIK 305
           DD+CEAHIF  E P   GRF C++      ++A  +++ +PE+++  E+  + K    + 
Sbjct: 242 DDLCEAHIFLYEHPKADGRFICSSHHAIIYDVAKMVREKWPEYYVPTEFKGIDKDLPVVS 301

Query: 306 WGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
           +   KL + GF++ Y L+ +   +I   R+   LP
Sbjct: 302 FSSKKLTDMGFQFKYTLEDMYKGAIDTCRQKQLLP 336

Petunia hybrida (taxid: 4102)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 1EC: 9

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  168 bits (425), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 179/339 (52%), Gaps = 27/339 (7%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRP--NLEDKSKVDLLKSLPGAETRLIFFEAE 66
           VCVTG  GF+GSWL+ +LL++GY V  T+R   NL+   KV  L  LP A+T L  ++A+
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLK---KVQHLLDLPNAKTLLTLWKAD 64

Query: 67  IYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI 126
           + +  ++++AI GCD VFHVATP+          V++  V     I   CVK+ TV+R +
Sbjct: 65  LSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFV 124

Query: 127 YTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG 186
           +T+S    +  +       K+  DE  ++  +  +        +Y  SK  +EK    + 
Sbjct: 125 FTSSAGTVNVEEHQ-----KNVYDENDWSDLEF-IMSKKMTGWMYFVSKTLAEKAAWDFA 178

Query: 187 -SSGLEVVALALGVVAGDTNLPY--SSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP 243
              GL+ +++   +V G    P+  +S P S+I  L  +T NE  Y  +R  +       
Sbjct: 179 EEKGLDFISIIPTLVVG----PFITTSMPPSLITALSPITRNEAHYSIIRQGQ------- 227

Query: 244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY--LDVPK 301
            VH+DD+C AHIF  E+ +  GR+ C++   +   I+  L+  YPE+++   +  +D   
Sbjct: 228 YVHLDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEGVDENL 287

Query: 302 REIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
           + I++   KL + GF + Y L+ +  +SI+  R+ G+LP
Sbjct: 288 KSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFLP 326

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  164 bits (416), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 178/335 (53%), Gaps = 20/335 (5%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  GF+GSWLI +LL++GY V  T+R + ++  KV  L  LP A+T L  ++A+++
Sbjct: 25  VCVTGASGFIGSWLIMRLLERGYTVRATVR-DPDNTKKVQHLLDLPNAKTNLTLWKADLH 83

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           +  +F+ A+ GC  VFH+ATP+          +++  +     I   CVK+  ++R+++T
Sbjct: 84  EEGSFDAAVDGCTGVFHIATPMDFESKDPENEMIKPTINGMLDILKSCVKA-KLRRVVFT 142

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS- 187
           +S         +  A  K   DETC++  D   +       +Y  SK+ +E+    Y + 
Sbjct: 143 SSGGTV-----NVEATQKPVYDETCWSALDFIRSVKMTGW-MYFVSKILAEQAAWKYAAE 196

Query: 188 SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHI 247
           + LE +++   +V G   +P  S P S+I  L  +T  E  Y  ++  +        VH+
Sbjct: 197 NNLEFISIIPPLVVGPFIMP--SMPPSLITALSPITRTESHYTIIKQGQ-------FVHL 247

Query: 248 DDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKR--EIK 305
           DD+C +HIF  E P  +GR+  +    +  +IA  L++ YPE+++  ++ D  +   +++
Sbjct: 248 DDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKEDMGQVQ 307

Query: 306 WGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
           +   KL + GFE+ Y LK +   +++  R  G LP
Sbjct: 308 FSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLLP 342

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51103|DFRA_CALCH Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1

 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 174/342 (50%), Gaps = 17/342 (4%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRL 60
           M   S   VCVTG  GF+GSWL+ +LL++GYIV  T+R N  D  KV  L  LP AET L
Sbjct: 1   MKEDSPPTVCVTGAAGFIGSWLVMRLLERGYIVRATVR-NPGDMKKVKHLLELPKAETNL 59

Query: 61  IFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG 120
             ++A++    +F+ AI+GC  VFHVATP+          +++  +     I   C K+ 
Sbjct: 60  TLWKADLTQEGSFDEAIEGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAK 119

Query: 121 TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEK 180
           TVK+L+YT+S    + ++E     Y    DE+ ++  D   +        ++   +  + 
Sbjct: 120 TVKKLVYTSSAGTVN-VQETQLPVY----DESHWSDLDFIYSKKMTAWMYFVSKTLAEKA 174

Query: 181 ELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG 240
            + +   + ++ V++   +V G    P  + P S+I  L  +   E  Y  ++  +    
Sbjct: 175 AMEAAKENNIDFVSIIPPLVVGPFINP--TFPPSLITALSLINGAESHYSIIKQGQ---- 228

Query: 241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY--LD 298
               VH+DD+CE HIF  E P   GR+ C+    +  ++A  ++Q +PE+H+  ++  +D
Sbjct: 229 ---YVHLDDLCECHIFLYENPEAKGRYICSKQDATIHQLARMIKQKWPEYHVPTQFAGID 285

Query: 299 VPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
                + +   KL + GF++ YDL+ +   +I   ++ G+LP
Sbjct: 286 EELPTVSFSSKKLIDMGFKFKYDLEDMFKGAIDSCKEKGFLP 327

Callistephus chinensis (taxid: 13379)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 174/339 (51%), Gaps = 27/339 (7%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           V VTG  GFVGSWL+ KLL  GY V  T+R +  +  K   L  LPGA+ RL  ++A++ 
Sbjct: 8   VVVTGASGFVGSWLVMKLLQAGYTVRATVR-DPANVEKTKPLLELPGAKERLSIWKADLS 66

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           +  +F  AI GC  VFHVATP+          V++  V     I   C ++GTVKR+++T
Sbjct: 67  EDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFT 126

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLR--VYIESKMKSEKELLSYG 186
           +S    + ++E     Y    D+  ++  D+   C    +   +Y  SK  +EK  + Y 
Sbjct: 127 SSAGSVN-IEERPRPAY----DQDNWSDIDY---CRRVKMTGWMYFVSKALAEKAAMEYA 178

Query: 187 S-SGLEVVALALGVVAGDTNLPYSST--PVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP 243
           S +GL+ +++   +V G    P+ S   P S++  L  +T NE  Y        IL ++ 
Sbjct: 179 SENGLDFISIIPTLVVG----PFLSAGMPPSLVTALALITGNEAHYS-------ILKQVQ 227

Query: 244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPK-- 301
           LVH+DD+C+A  F  E P  +GR+ C++   +   +A  LQ  +PE+ I Q++  V    
Sbjct: 228 LVHLDDLCDAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDDNL 287

Query: 302 REIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
           + I +   KL + GF + Y  + + D +I   R  G +P
Sbjct: 288 QPIHFSSKKLLDHGFSFRYTTEDMFDAAIHTCRDKGLIP 326

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  162 bits (409), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 175/344 (50%), Gaps = 21/344 (6%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRL 60
           M+  S   VCVTG  GF+GSWL+ +LL++GY+VH T+R +  D  KV  L  LP A+T L
Sbjct: 1   MEEDSPATVCVTGAAGFIGSWLVMRLLERGYVVHATVR-DPGDLKKVKHLLELPKAQTNL 59

Query: 61  IFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG 120
             ++A++    +F+ AIQGC  VFH+ATP+          +++  +     I   CVK+ 
Sbjct: 60  KLWKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAK 119

Query: 121 TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEK 180
           TVK+L++T+S         +G        DE+ ++  D   +        ++   +  + 
Sbjct: 120 TVKKLVFTSSAGTV-----NGQEKQLHVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKA 174

Query: 181 ELLSYGSSGLEVVALALGVVAGDTNLPY--SSTPVSVIGGLCQLTNNEYVYQTLRDTEEI 238
              +   + +  +++   +V G    P+  S+ P S++  L  +T NE  Y  ++  +  
Sbjct: 175 AWDATKGNNISFISIIPTLVVG----PFITSTFPPSLVTALSLITGNEAHYSIIKQGQ-- 228

Query: 239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY-- 296
                 VH+DD+CE HI+  E P   GR+ C++   +  ++A  ++  +PE++I  ++  
Sbjct: 229 -----YVHLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPG 283

Query: 297 LDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
           +D     + +   KL + GFE+ Y+L+ +   +I   R+ G LP
Sbjct: 284 IDEELPIVSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREKGLLP 327

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  161 bits (408), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 175/337 (51%), Gaps = 23/337 (6%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  GF+GSWL+ +LL+ GY V  T+R +  ++ KV  L  LP AET L  ++A++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLEHGYTVRATVR-DPTNQKKVKHLLDLPKAETHLTLWKADLA 66

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           D  +F+ AIQGC  VFHVATP+          V++  +     I   C K+ TV++L++T
Sbjct: 67  DEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFT 126

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLR--VYIESKMKSEKELLSYG 186
           +S    + ++E     Y    DE+ ++  +    C +  +   +Y  SK  +E+    Y 
Sbjct: 127 SSAGTVN-VEEHQKPVY----DESNWSDVEF---CRSVKMTGWMYFVSKTLAEQAAWKYA 178

Query: 187 -SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV 245
             + ++ + +   +V G   +P  S P S+I GL  +  NE  Y  ++  +        V
Sbjct: 179 KENNIDFITIIPTLVIGPFLMP--SMPPSLITGLSPILRNESHYGIIKQGQ-------YV 229

Query: 246 HIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY--LDVPKRE 303
           H+DD+C +HI+  E P   GR+ C++   +  E+   L++ YPE++I  ++  +D     
Sbjct: 230 HLDDLCLSHIYLYEHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEP 289

Query: 304 IKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
           + +   KL E GFE+ Y L+ +   ++   R  G +P
Sbjct: 290 VHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIP 326

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51108|DFRA_MAIZE Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1

 Score =  160 bits (406), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 175/337 (51%), Gaps = 22/337 (6%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           V VTG  GFVGSWL+ KLL  GY V  T+R +  +  K   L  LPGA  RL  ++A++ 
Sbjct: 13  VLVTGASGFVGSWLVMKLLQAGYTVRATVR-DPANVGKTKPLMDLPGATERLSIWKADLA 71

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           +  +F +AI+GC  VFHVATP+  +       V++  V     I   C ++GTV+R+++T
Sbjct: 72  EEGSFHDAIRGCTGVFHVATPMDFLSKDPENEVIKPTVEGMISIMRACKEAGTVRRIVFT 131

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSS 188
           +S    + L+E     Y    DE  +T  D            ++   +  +  L      
Sbjct: 132 SSAGTVN-LEERQRPVY----DEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEH 186

Query: 189 GLEVVALALGVVAGDTNLPY--SSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
           GL++V +   +V G    P+  +S P S+I  L  +T N   Y        IL ++ L+H
Sbjct: 187 GLDLVTIIPTLVVG----PFISASMPPSLITALALITGNAPHYS-------ILKQVQLIH 235

Query: 247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPK--REI 304
           +DD+C+A IF  E P+ +GR+ C++  V+   +A+ L+  YPE+ + Q +  +    + +
Sbjct: 236 LDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPGIQDDLQPV 295

Query: 305 KWGGTKLEEKGFEYNYD-LKMILDDSIKCGRKSGYLP 340
           ++   KL++ GF + Y  L+ + D +I+  ++ G +P
Sbjct: 296 RFSSKKLQDLGFTFRYKTLEDMFDAAIRTCQEKGLIP 332

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 175/337 (51%), Gaps = 23/337 (6%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  GF+GSWL+ +LL+ GY V  T+R +  ++ KV  L  LP AET L  ++A++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLEHGYTVRATVR-DPTNQKKVKHLLDLPKAETHLTLWKADLA 66

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           D  +F+ AIQGC  VFHVATP+          V++  +     I   C K+ TV++L++T
Sbjct: 67  DEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKLVFT 126

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLR--VYIESKMKSEKELLSYG 186
           +S    + ++E     Y    DE+ ++  +    C +  +   +Y  SK  +E+    Y 
Sbjct: 127 SSAGTVN-VEEHQKPVY----DESNWSDVEF---CRSVKMTGWMYFVSKTLAEQAAWKYA 178

Query: 187 -SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV 245
             + ++ + +   +V G   +P  S P S+I GL  +  NE  Y  ++  +        V
Sbjct: 179 KENNIDFITIIPTLVIGPFLMP--SMPPSLITGLSPILRNESHYGIIKQGQ-------YV 229

Query: 246 HIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY--LDVPKRE 303
           H+DD+C +HI+  + P   GR+ C++   +  E+   L++ YPE++I  ++  +D     
Sbjct: 230 HLDDLCLSHIYLYKHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPTKFKGIDDNLEP 289

Query: 304 IKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
           + +   KL E GFE+ Y L+ +   ++   R  G +P
Sbjct: 290 VHFSSKKLREIGFEFKYSLEDMFVGAVDACRAKGLIP 326

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 174/338 (51%), Gaps = 27/338 (7%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  GF+GSWL+ +LL++   V  T+R +  +  KV  L  LP AET L  ++A++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLERRLTVRATVR-DPTNVKKVKHLLDLPKAETHLTLWKADLA 66

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           D  +F+ AI+GC  VFHVATP+          V++  +     I   C  + TV+RL++T
Sbjct: 67  DEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFT 126

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLR--VYIESKMKSEKELLSYG 186
           +S    + ++E     Y    DE+C++  +    C  + +   +Y  SK  +E+    Y 
Sbjct: 127 SSAGTVN-IQEHQLPVY----DESCWSDMEF---CRAKKMTAWMYFVSKTLAEQAAWKYA 178

Query: 187 S-SGLEVVALALGVVAGDTNLPY--SSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP 243
             + ++ + +   +V G    P+  SS P S+I  L  +T NE  Y  +R  +       
Sbjct: 179 KENNIDFITIIPTLVVG----PFIMSSMPPSLITALSPITGNEAHYSIIRQGQ------- 227

Query: 244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY--LDVPK 301
            VH+DD+C AHI+  E P   GR+ C++      ++A  L++ YPE++I  E+  +D   
Sbjct: 228 FVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENL 287

Query: 302 REIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
           + + +   KL + GFE+ Y L+ +   ++   R  G L
Sbjct: 288 KSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
359489714	335	PREDICTED: anthocyanidin reductase-like	0.961	0.979	0.620	1e-116
297745410	349	unnamed protein product [Vitis vinifera]	0.973	0.951	0.616	1e-116
225454479	339	PREDICTED: dihydroflavonol-4-reductase-l	0.973	0.979	0.6	1e-110
297745411	382	unnamed protein product [Vitis vinifera]	0.973	0.869	0.6	1e-110
357446529	341	Dihydroflavonol-4-reductase [Medicago tr	0.947	0.947	0.557	5e-99
356573217	340	PREDICTED: anthocyanidin reductase-like	0.953	0.955	0.559	7e-99
388517423	341	unknown [Medicago truncatula]	0.947	0.947	0.557	8e-99
356506054	343	PREDICTED: anthocyanidin reductase-like	0.956	0.950	0.560	1e-98
357446523	343	Dihydroflavonol-4-reductase [Medicago tr	0.953	0.947	0.563	1e-96
388512891	338	unknown [Lotus japonicus]	0.970	0.979	0.559	3e-95

>gi|359489714|ref|XP_002280945.2| PREDICTED: anthocyanidin reductase-like [Vitis vinifera]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/335 (62%), Positives = 259/335 (77%), Gaps = 7/335 (2%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KVCVTGG G++GS+L+KKLL KGY VH TLR N+ED +KV LL+S P AETRL  F+A+I
Sbjct: 4   KVCVTGGSGYIGSYLVKKLLQKGYTVHATLR-NMEDHAKVGLLQSFPNAETRLKLFQADI 62

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
           Y+PD FE AI+GC+FVFHVATP+ H +G+ YKN  EA +  AK IA  C+KSG+V+RLIY
Sbjct: 63  YNPDEFEEAIKGCEFVFHVATPMHHSEGFQYKNTTEAAISGAKSIAMSCIKSGSVRRLIY 122

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
           TA+V+ ASPL +DGS+ +KDS+DE+C+TPP+  L   N ++  Y +SK  +EKE+LS+G+
Sbjct: 123 TATVMAASPLTDDGSS-FKDSMDESCWTPPNLSLPYTNSFVEDYTDSKTLAEKEILSFGN 181

Query: 188 S---GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL 244
           +   GLEVV LA G+V GDT L Y  TP SV   + QLT+N Y YQ LR  EE LGK+P+
Sbjct: 182 NNNGGLEVVTLACGLVGGDTLLSY--TPASVAVLIAQLTDNPYHYQLLRFLEESLGKIPI 239

Query: 245 VHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREI 304
           +HIDDVCEAHIFCMEKPS+ GRF CTN ++SSAEI    Q+N+P+F IK EYL+ PKR+I
Sbjct: 240 IHIDDVCEAHIFCMEKPSIHGRFLCTNSYISSAEITDYYQKNHPQFDIKPEYLNGPKRKI 299

Query: 305 KWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
           KWG TKL E+GFEY YD  MILDDSIKCGRK G L
Sbjct: 300 KWGSTKLIEEGFEYKYDTSMILDDSIKCGRKMGDL 334

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745410|emb|CBI40490.3| unnamed protein product [Vitis vinifera]

 Score =  424 bits (1089), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/339 (61%), Positives = 261/339 (76%), Gaps = 7/339 (2%)

Query: 4   KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFF 63
           K + KVCVTGG G++GS+L+KKLL KGY VH TLR N+ED +KV LL+S P AETRL  F
Sbjct: 14  KMSCKVCVTGGSGYIGSYLVKKLLQKGYTVHATLR-NMEDHAKVGLLQSFPNAETRLKLF 72

Query: 64  EAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK 123
           +A+IY+PD FE AI+GC+FVFHVATP+ H +G+ YKN  EA +  AK IA  C+KSG+V+
Sbjct: 73  QADIYNPDEFEEAIKGCEFVFHVATPMHHSEGFQYKNTTEAAISGAKSIAMSCIKSGSVR 132

Query: 124 RLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL 183
           RLIYTA+V+ ASPL +DGS+ +KDS+DE+C+TPP+  L   N ++  Y +SK  +EKE+L
Sbjct: 133 RLIYTATVMAASPLTDDGSS-FKDSMDESCWTPPNLSLPYTNSFVEDYTDSKTLAEKEIL 191

Query: 184 SYGSS---GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG 240
           S+G++   GLEVV LA G+V GDT L Y  TP SV   + QLT+N Y YQ LR  EE LG
Sbjct: 192 SFGNNNNGGLEVVTLACGLVGGDTLLSY--TPASVAVLIAQLTDNPYHYQLLRFLEESLG 249

Query: 241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVP 300
           K+P++HIDDVCEAHIFCMEKPS+ GRF CTN ++SSAEI    Q+N+P+F IK EYL+ P
Sbjct: 250 KIPIIHIDDVCEAHIFCMEKPSIHGRFLCTNSYISSAEITDYYQKNHPQFDIKPEYLNGP 309

Query: 301 KREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
           KR+IKWG TKL E+GFEY YD  MILDDSIKCGRK G L
Sbjct: 310 KRKIKWGSTKLIEEGFEYKYDTSMILDDSIKCGRKMGDL 348

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454479|ref|XP_002276827.1| PREDICTED: dihydroflavonol-4-reductase-like [Vitis vinifera]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/340 (60%), Positives = 260/340 (76%), Gaps = 8/340 (2%)

Query: 4   KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFF 63
           K + +VCVTGG G++GS L+KKLL KGY VH TLR NL D +KV LL+SLP A+TRL  F
Sbjct: 3   KRSCRVCVTGGAGYIGSSLVKKLLLKGYTVHATLR-NLHDHAKVGLLQSLPNADTRLRLF 61

Query: 64  EAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK 123
           +A+IY+PD FE AIQGC+FVFHVATPLQHI+G  YK+  EA V  AK IA  C+KS TV+
Sbjct: 62  KADIYNPDEFEQAIQGCEFVFHVATPLQHIEGSQYKDTAEAAVAGAKSIAVSCIKSATVR 121

Query: 124 RLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL 183
           RLIYTASV+ A+PLK+DG+ G+KDS+DE+C+TP + P +  N +L+ Y  SK  +EKE+L
Sbjct: 122 RLIYTASVVAAAPLKDDGT-GFKDSMDESCWTPLNLPFSHSNSHLKDYAHSKTVAEKEIL 180

Query: 184 SYG---SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG 240
           S+G   + GLEVV+LA G+V G+T LPY  TP SV   + QLT++E  YQTL+  EE+LG
Sbjct: 181 SHGENKTGGLEVVSLACGLVGGETLLPY--TPESVGLFISQLTDHENRYQTLKFLEELLG 238

Query: 241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV- 299
           K+P++HIDDVCEAHIFC+EKPS++GRF C +  +SSAEI +   +NYP+ HIK EYL + 
Sbjct: 239 KVPIIHIDDVCEAHIFCIEKPSINGRFLCASSCISSAEITNYYHENYPQLHIKAEYLKIG 298

Query: 300 PKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
           PK+EIKWG TKL E+GFEY  D  MIL+D I CGR+ G L
Sbjct: 299 PKKEIKWGSTKLIEEGFEYKCDTNMILEDCISCGRQMGDL 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745411|emb|CBI40491.3| unnamed protein product [Vitis vinifera]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 204/340 (60%), Positives = 260/340 (76%), Gaps = 8/340 (2%)

Query: 4   KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFF 63
           K + +VCVTGG G++GS L+KKLL KGY VH TLR NL D +KV LL+SLP A+TRL  F
Sbjct: 46  KRSCRVCVTGGAGYIGSSLVKKLLLKGYTVHATLR-NLHDHAKVGLLQSLPNADTRLRLF 104

Query: 64  EAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK 123
           +A+IY+PD FE AIQGC+FVFHVATPLQHI+G  YK+  EA V  AK IA  C+KS TV+
Sbjct: 105 KADIYNPDEFEQAIQGCEFVFHVATPLQHIEGSQYKDTAEAAVAGAKSIAVSCIKSATVR 164

Query: 124 RLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL 183
           RLIYTASV+ A+PLK+DG+ G+KDS+DE+C+TP + P +  N +L+ Y  SK  +EKE+L
Sbjct: 165 RLIYTASVVAAAPLKDDGT-GFKDSMDESCWTPLNLPFSHSNSHLKDYAHSKTVAEKEIL 223

Query: 184 SYG---SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG 240
           S+G   + GLEVV+LA G+V G+T LPY  TP SV   + QLT++E  YQTL+  EE+LG
Sbjct: 224 SHGENKTGGLEVVSLACGLVGGETLLPY--TPESVGLFISQLTDHENRYQTLKFLEELLG 281

Query: 241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV- 299
           K+P++HIDDVCEAHIFC+EKPS++GRF C +  +SSAEI +   +NYP+ HIK EYL + 
Sbjct: 282 KVPIIHIDDVCEAHIFCIEKPSINGRFLCASSCISSAEITNYYHENYPQLHIKAEYLKIG 341

Query: 300 PKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
           PK+EIKWG TKL E+GFEY  D  MIL+D I CGR+ G L
Sbjct: 342 PKKEIKWGSTKLIEEGFEYKCDTNMILEDCISCGRQMGDL 381

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446529|ref|XP_003593542.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355482590|gb|AES63793.1| Dihydroflavonol-4-reductase [Medicago truncatula]

 Score =  367 bits (942), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 189/339 (55%), Positives = 242/339 (71%), Gaps = 16/339 (4%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KVCVTGG G++GS L+KKLL+KGY VH TLR NL+D+SKV  LK  P A TRL+ FEA+I
Sbjct: 6   KVCVTGGAGYIGSLLVKKLLEKGYTVHATLR-NLKDESKVGFLKGFPHANTRLVLFEADI 64

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
           Y PD F  AIQGC+FVFHVATP  H     +K++ EA + + K I   C+KS TV++LIY
Sbjct: 65  YKPDGFWPAIQGCEFVFHVATPFLHQTDSQFKSIEEAAIASVKSIVETCIKSRTVRKLIY 124

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDH---PLTCHNEYLRVYIESKMKSEKELLS 184
           T +V+ +SPLK+DG  GYKD IDETC+TP      PLT    + + Y  SK  +E+ELL+
Sbjct: 125 TGTVVASSPLKDDG-CGYKDFIDETCWTPLQSLHLPLT---PFHKDYAYSKTLAERELLT 180

Query: 185 Y------GSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEI 238
                  G+ G+EVV LA+G+V GD  L Y    V+VI  + Q+ +NE  YQ+L+  E+I
Sbjct: 181 SNGKDENGNGGIEVVTLAVGLVGGDALLSYLPASVAVI--ISQIHDNEVAYQSLKFLEDI 238

Query: 239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLD 298
            GK+PLVHIDDVCEAHIFC E PS++GRF   N + SSAEIA+   QNYPEF++K++YL+
Sbjct: 239 DGKIPLVHIDDVCEAHIFCAEDPSINGRFLVANSYASSAEIANYYLQNYPEFNLKEKYLE 298

Query: 299 VPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSG 337
            P + IKW  TKL +KGF Y YDLKMILDDS+KCGR++G
Sbjct: 299 EPNKAIKWASTKLTDKGFVYKYDLKMILDDSVKCGRRTG 337

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573217|ref|XP_003554760.1| PREDICTED: anthocyanidin reductase-like [Glycine max]

 Score =  366 bits (940), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 189/338 (55%), Positives = 246/338 (72%), Gaps = 13/338 (3%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGA-ETRLIFFEAE 66
           KVCVTGG  ++GS L+KKLL KGY VH+TLR N +D+SK+ LL+ LP A + RL+ FEA+
Sbjct: 10  KVCVTGGASYIGSCLVKKLLQKGYTVHSTLR-NFKDESKIGLLRGLPHANDERLVLFEAD 68

Query: 67  IYDPDTFENAIQGCDFVFHVATPLQH-IDGYLYKNVVEACVGAAKKIASFCVKSGTVKRL 125
           IY PD +E AIQGC+ VFHVATP +H  D  L+KN  EA +   K IA +C+KSGTV+RL
Sbjct: 69  IYKPDEYEPAIQGCEIVFHVATPYEHQSDSLLFKNTSEAAIAGVKSIAKYCIKSGTVRRL 128

Query: 126 IYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSY 185
           IYTASV+ ASPLK+DGS G+KD IDETC+TP +  +   +++   Y +SK ++E+ELLSY
Sbjct: 129 IYTASVVAASPLKDDGS-GFKDFIDETCWTPLNLSMGTLHQW---YTDSKTQAERELLSY 184

Query: 186 GSS----GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK 241
           GS     GLEVV+LA G+V GDT L Y  TP+SV     Q+ +NE  YQ+L+  EE+ GK
Sbjct: 185 GSGENGGGLEVVSLACGLVGGDTLLSY--TPLSVTLLSSQVQDNEAAYQSLKFLEELDGK 242

Query: 242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPK 301
           +P+VH++DVCEAHIFC E PS++GRF   + + SSAEIA+   Q YPEF++  +YL+ PK
Sbjct: 243 IPIVHVEDVCEAHIFCAENPSINGRFLVASSYASSAEIANYYLQAYPEFNLNHKYLEGPK 302

Query: 302 REIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
           R+IKW   KL + GF Y  DLKMILDD I+C R+ G L
Sbjct: 303 RDIKWASRKLTDNGFVYKNDLKMILDDCIRCARRMGDL 340

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388517423|gb|AFK46773.1| unknown [Medicago truncatula]

 Score =  366 bits (940), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 189/339 (55%), Positives = 242/339 (71%), Gaps = 16/339 (4%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KVCVTGG G++GS L+KKLL+KGY VH TLR NL+D+SKV  LK  P A TRL+ FEA+I
Sbjct: 6   KVCVTGGAGYIGSLLVKKLLEKGYTVHATLR-NLKDESKVGFLKGFPHANTRLVLFEADI 64

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
           Y PD F  AIQGC+FVFHVATP  H     +K++ EA + + K I   C+KS TV++LIY
Sbjct: 65  YKPDGFWPAIQGCEFVFHVATPFLHQTDSQFKSIEEAAIASVKSIVETCIKSRTVRKLIY 124

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDH---PLTCHNEYLRVYIESKMKSEKELLS 184
           T +V+ +SPLK+DG  GYKD IDETC+TP      PLT    + + Y  SK  +E+ELL+
Sbjct: 125 TGTVVASSPLKDDG-CGYKDFIDETCWTPLQSLHLPLT---PFHKDYAYSKTLAERELLT 180

Query: 185 Y------GSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEI 238
                  G+ G+EVV LA+G+V GD  L Y    V+VI  + Q+ +NE  YQ+L+  E+I
Sbjct: 181 SNGKDENGNGGIEVVTLAVGLVGGDALLSYLPASVAVI--ISQIHDNEVAYQSLKFLEDI 238

Query: 239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLD 298
            GK+PLVHIDDVCEAHIFC E PS++GRF   N + SSAEIA+   QNYPEF++K++YL+
Sbjct: 239 DGKIPLVHIDDVCEAHIFCAEDPSINGRFLVANSYASSAEIANYYFQNYPEFNLKEKYLE 298

Query: 299 VPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSG 337
            P + IKW  TKL +KGF Y YDLKMILDDS+KCGR++G
Sbjct: 299 EPNKAIKWASTKLTDKGFVYKYDLKMILDDSVKCGRRTG 337

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506054|ref|XP_003521803.1| PREDICTED: anthocyanidin reductase-like [Glycine max]

 Score =  365 bits (938), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 189/337 (56%), Positives = 244/337 (72%), Gaps = 11/337 (3%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KVCVTGG G++GSWLIKKLL KGY VH TLR +L+++SKV LLKSLP +E +L+ FEA+I
Sbjct: 9   KVCVTGGSGYIGSWLIKKLLAKGYTVHATLR-DLKNESKVGLLKSLPQSEGKLVLFEADI 67

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
           Y+P+ F+ AI+GC FVFHVATP+ H  G  YK+  EA V   K I   CV++GTVKRLIY
Sbjct: 68  YNPNDFDLAIEGCKFVFHVATPMIHEPGSQYKDTSEAAVAGTKSIFLSCVRAGTVKRLIY 127

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC---HNEYLRVYIESKMKSEKELLS 184
           TASV+ ASPLKEDGS G+KD++DE C+TP +  L      + +L+ Y  SK  SE+ +LS
Sbjct: 128 TASVVSASPLKEDGS-GFKDAMDENCWTPLNDSLAYIYRDDPFLKGYTYSKTLSERHVLS 186

Query: 185 YGS----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG 240
           YG+     G+EVV L  G+V GDT L  SSTP S +  + Q+  NE  Y +L+  +E+LG
Sbjct: 187 YGNEENGGGMEVVTLTCGLVGGDTLL--SSTPASGVVCIAQIMQNERAYISLKFLKELLG 244

Query: 241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVP 300
           K+PLVH+DDVCEAHIFCME  S+SGRF C + ++S  E+A+    +YPEF++KQEY D  
Sbjct: 245 KIPLVHVDDVCEAHIFCMESTSISGRFLCASSYISLEEMANHYALHYPEFNVKQEYEDGL 304

Query: 301 KREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSG 337
           K++IKW  TKL +KGF Y YD KM+LDD IKC R+ G
Sbjct: 305 KKDIKWASTKLCDKGFVYKYDAKMLLDDCIKCARRMG 341

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446523|ref|XP_003593539.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355482587|gb|AES63790.1| Dihydroflavonol-4-reductase [Medicago truncatula]

 Score =  359 bits (921), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 192/341 (56%), Positives = 240/341 (70%), Gaps = 16/341 (4%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KVCVTGG G++GS L+KKLL+KGY VH TLR NL+D+SKV  L+  P A TRL+ FEA+I
Sbjct: 7   KVCVTGGAGYIGSLLVKKLLEKGYTVHATLR-NLKDESKVSFLRGFPHANTRLVLFEADI 65

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
           Y PD F  AIQGC+FVFHVATPL H     +K++ EA +   K IA  C+KS TV+RLIY
Sbjct: 66  YKPDDFWPAIQGCEFVFHVATPLLHQTDSQFKSIEEAAIAGVKSIAETCIKSRTVRRLIY 125

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDH---PLTCHNEYLRVYIESKMKSEKELL- 183
           T +V  ASPLK+DG  GYKD IDETC+TP  +   PLT    + + Y  SK  +E+ELL 
Sbjct: 126 TGTVFAASPLKDDG-CGYKDYIDETCWTPFQNLHLPLT---PFHKDYAYSKTLAERELLT 181

Query: 184 SYG-----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEI 238
           SYG     S G EVV+L LG+V G+T L Y    V+VI    QL +NE +YQ+L+  E+I
Sbjct: 182 SYGKDENGSGGFEVVSLVLGLVGGETPLSYLPGSVAVITS--QLQDNEALYQSLKFLEDI 239

Query: 239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLD 298
            GK P+VHIDDVCEAHIFC E PS++GRF   N + SSAEIA+   QNYPEF++K++YL+
Sbjct: 240 CGKCPIVHIDDVCEAHIFCAELPSINGRFLVANSYASSAEIANYYSQNYPEFNLKEKYLE 299

Query: 299 VPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
            P R IK   TKL + GF Y Y+LK ILDDSI+C R++G L
Sbjct: 300 GPNRAIKLASTKLIDNGFVYKYNLKKILDDSIRCARRTGDL 340

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512891|gb|AFK44507.1| unknown [Lotus japonicus]

 Score =  354 bits (909), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 192/343 (55%), Positives = 251/343 (73%), Gaps = 12/343 (3%)

Query: 2   DHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLI 61
           + K   KVCVTGG G++GS+L+K+LL+KGYIVH+TLR NL+D+SKV LL+S P AE+RL+
Sbjct: 3   EEKCKAKVCVTGGGGYLGSYLVKRLLEKGYIVHSTLR-NLKDESKVGLLRSFPHAESRLV 61

Query: 62  FFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGT 121
            FE +IY PD FE AIQ C+FVFHVATPLQH      K++ EA +   K IA  C+KSGT
Sbjct: 62  LFEGDIYKPDEFEPAIQYCEFVFHVATPLQHQTNSQLKSMSEAAIAGVKSIAMSCIKSGT 121

Query: 122 VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKE 181
           V+RLIYTASV+ +SPLK DG+ G+KD IDETC+TP  H  T      + Y +SK  +E+E
Sbjct: 122 VRRLIYTASVVASSPLKGDGT-GFKDFIDETCWTPF-HLDT--GALHKDYTDSKTLAERE 177

Query: 182 LLSYG-----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTE 236
           +LSYG     S  LEV++LA G+  G+  L Y  TP SV   + Q+ +NE +YQ+L+  E
Sbjct: 178 ILSYGKNENGSGALEVMSLACGLFGGEVFLNY--TPASVAVLISQVKDNEAMYQSLKFLE 235

Query: 237 EILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY 296
           +++GK+P+ HIDDVCEAHIFC+E PS++GRF   + +VSSA+IA+C  Q+YPEFH+K +Y
Sbjct: 236 DLIGKIPVAHIDDVCEAHIFCVENPSINGRFLVASSYVSSADIANCYSQHYPEFHLKDKY 295

Query: 297 LDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
           L+ PKR IKW  TKL +KGF YNYDLKM+LDD I+  R  G L
Sbjct: 296 LEGPKRAIKWASTKLTDKGFVYNYDLKMLLDDCIRSARGIGDL 338

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
TAIR|locus:2131734	354	AT4G27250 [Arabidopsis thalian	0.920	0.887	0.307	9.6e-41
TAIR|locus:2050882	364	BEN1 [Arabidopsis thaliana (ta	0.935	0.876	0.338	1.1e-39
TAIR|locus:2165427	382	DFR "dihydroflavonol 4-reducta	0.923	0.824	0.309	3.4e-38
TAIR|locus:2195733	340	BAN "BANYULS" [Arabidopsis tha	0.967	0.970	0.295	1.7e-36
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.935	0.978	0.272	3.1e-28
TAIR|locus:2033394	319	AT1G66800 [Arabidopsis thalian	0.410	0.438	0.367	5.2e-28
TAIR|locus:2012315	322	AT1G09510 [Arabidopsis thalian	0.888	0.940	0.295	1.7e-27
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.926	0.972	0.268	5.7e-27
TAIR|locus:2011741	325	AT1G76470 [Arabidopsis thalian	0.920	0.966	0.265	3.2e-26
TAIR|locus:2012280	325	AT1G09500 [Arabidopsis thalian	0.800	0.84	0.286	5.2e-26

TAIR|locus:2131734 AT4G27250 [Arabidopsis thaliana (taxid:3702)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 105/341 (30%), Positives = 178/341 (52%)

Query:    10 CVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD 69
             CVTG  G++GSWL+K LL +GY VH TLR    D +K +  +S      RL  F A++ D
Sbjct:    14 CVTGASGYIGSWLVKSLLQRGYTVHATLR----DLAKSEYFQSKWKENERLRLFRADLRD 69

Query:    70 PDTFENAIQGCDFVFHVATPLQ------HI--DGYLYKNVVEACVGAAKKIASFCVKSGT 121
               +F++A++GCD VFHVA  ++      H+  + Y+   V+E  +   + + S C+KS +
Sbjct:    70 DGSFDDAVKGCDGVFHVAASMEFDISSDHVNLESYVQSKVIEPALKGVRNVLSSCLKSKS 129

Query:   122 VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKE 181
             VKR+++T+S+  ++   +D +   +  +DETC    DH L        +Y+ SK+ SE+E
Sbjct:   130 VKRVVFTSSI--STLTAKDENERMRSFVDETCKAHVDHVLKTQASGW-IYVLSKLVSEEE 186

Query:   182 LLSYGSSXXXXXXXXXXXXXXDTNL-PYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG 240
                Y                    L P+  + V V+  L  +T +  ++  L    + +G
Sbjct:   187 AFRYAKERGMDLVSVITTTVSGPFLTPFVPSSVQVL--LSPITGDSKLFAILSAVNKRMG 244

Query:   241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHI-KQEYL-- 297
              + LVHI+D+C AH+F ME+P   G++ C    V + ++   +  ++ + ++ K + +  
Sbjct:   245 SIALVHIEDICRAHLFLMEQPKAKGQYICC---VDNIDMHELMLHHFSKDYLCKVQKVNE 301

Query:   298 DVPKRE-IK--WGGTKLEEKGFEYNYDLKMILDDSIKCGRK 335
             D  +RE +K      KL E GFEY Y ++ I+D +I    K
Sbjct:   302 DEEERECMKPIISSKKLRELGFEYKYGIEEIVDQTIDASIK 342

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2050882 BEN1 [Arabidopsis thaliana (taxid:3702)]

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 114/337 (33%), Positives = 165/337 (48%)

Query:     9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE-DKSKVDLLKSLPGAETRLIFFEAEI 67
             VCVTGG GFV SWLI +LL +GY V  T+R N E +K  +  L  LP A  RL  F A++
Sbjct:    40 VCVTGGSGFVASWLIMRLLQRGYSVRATVRTNSEGNKKDISYLTELPFASERLQIFTADL 99

Query:    68 YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
              +P++F+ AI+GC  VFHVA P+        + V +  V     I   C+ + TVKR  Y
Sbjct:   100 NEPESFKPAIEGCKAVFHVAHPMDPNSNETEETVTKRTVQGLMGILKSCLDAKTVKRFFY 159

Query:   128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRV---YIESKMKSEKELLS 184
             T+S +        G+ G    +DE+ ++  D  +  + +  RV   Y+ SKM +E   L 
Sbjct:   160 TSSAVTV--FYSGGNGGGGGEVDESVWS--DVEVFRNQKEKRVSSSYVVSKMAAETAALE 215

Query:   185 YGSSXXXXXXXXXXXXXXDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL 244
             +G                   +  SS P SV   L  L  N Y  + L DT        +
Sbjct:   216 FGGKNGLEVVTLVIPLVVGPFIS-SSLPSSVFISLAMLFGN-YKEKYLFDTYN------M 267

Query:   245 VHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREI 304
             VHIDDV  A IF +EKP   GR+ C++V +   E+   L   +P+F +    L+  K E 
Sbjct:   268 VHIDDVARAMIFLLEKPVAKGRYICSSVEMKIDEVFEFLSTKFPQFQLPSIDLNKYKVEK 327

Query:   305 KWG--GTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
             + G    KL+  GFE+ Y  + I   +I+  +  G+L
Sbjct:   328 RMGLSSKKLKSAGFEFKYGAEEIFSGAIRSCQARGFL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009813 "flavonoid biosynthetic process" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0010422 "regulation of brassinosteroid biosynthetic process" evidence=IMP

GO:0016131 "brassinosteroid metabolic process" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2165427 DFR "dihydroflavonol 4-reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 104/336 (30%), Positives = 173/336 (51%)

Query:     9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLR-P-NLEDKSKVDLLKSLPGAETRLIFFEAE 66
             VCVTG  GF+GSWL+ +LL++GY V  T+R P NL+   KV  L  LP A+T L  ++A+
Sbjct:     8 VCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLK---KVQHLLDLPNAKTLLTLWKAD 64

Query:    67 IYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI 126
             + +  ++++AI GCD VFHVATP+          V++  V     I   CVK+ TV+R +
Sbjct:    65 LSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFV 124

Query:   127 YTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG 186
             +T+S    + ++E      K+  DE  ++  +  ++       +Y  SK  +EK    + 
Sbjct:   125 FTSSAGTVN-VEEH----QKNVYDENDWSDLEFIMSKKMTGW-MYFVSKTLAEKAAWDFA 178

Query:   187 SSXXXXXXXXXXXXXXDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
                                +  +S P S+I  L  +T NE  Y  +R  +        VH
Sbjct:   179 EEKGLDFISIIPTLVVGPFIT-TSMPPSLITALSPITRNEAHYSIIRQGQ-------YVH 230

Query:   247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY--LDVPKREI 304
             +DD+C AHIF  E+ +  GR+ C++   +   I+  L+  YPE+++   +  +D   + I
Sbjct:   231 LDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEGVDENLKSI 290

Query:   305 KWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
             ++   KL + GF + Y L+ +  +SI+  R+ G+LP
Sbjct:   291 EFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFLP 326

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=TAS

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA;IMP;TAS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=IMP;TAS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2195733 BAN "BANYULS" [Arabidopsis thaliana (taxid:3702)]

 Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 101/342 (29%), Positives = 171/342 (50%)

Query:     1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRL 60
             + H  + K CV GG G + S LIK LL  GY V+TT+R + E++ K+  L+ L      L
Sbjct:     5 LTHTGSKKACVIGGTGNLASILIKHLLQSGYKVNTTVR-DPENEKKIAHLRKLQELGD-L 62

Query:    61 IFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG 120
               F+A++ D D+FE++  GC+++FHVATP+        K++++  +     +   C+KS 
Sbjct:    63 KIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSK 122

Query:   121 TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEK 180
             +VKR+IYT+S   A+ +  +  +G    ++E  +T  +  LT    +   Y  SK+ +EK
Sbjct:   123 SVKRVIYTSS---AAAVSINNLSGTGIVMNEENWTDVEF-LTEEKPFNWGYPISKVLAEK 178

Query:   181 ELLSYGSSXXXXXXXXXXXXXXDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG 240
                 +                   +L  S  P S+   +  +T  E     L++ +++ G
Sbjct:   179 TAWEFAKENKINLVTVIPALIAGNSL-LSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSG 237

Query:   241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY---L 297
              +  VH+DD+  AH+F  EK + SGR+ C     S  EIA  L Q YP++++  E+   L
Sbjct:   238 SISFVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNVLSEFEEGL 297

Query:   298 DVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
              +PK  +     KL  +GF + Y +  + D  I+     G +
Sbjct:   298 SIPKLTLS--SQKLINEGFRFEYGINEMYDQMIEYFESKGLI 337

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0033729 "anthocyanidin reductase activity" evidence=IDA

GO:0009964 "negative regulation of flavonoid biosynthetic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=ISS

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 93/341 (27%), Positives = 157/341 (46%)

Query:     1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRL 60
             MD     KVCVTG  GF+ SWL+K+LL +GY V  T+R    +K    L K L GA+ RL
Sbjct:     1 MDQAKG-KVCVTGASGFLASWLVKRLLLEGYEVIGTVRDPGNEKKLAHLWK-LEGAKERL 58

Query:    61 IFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG 120
                +A++ +  +F+NAI GC  VFH A+P+        + ++   +     +   C K+ 
Sbjct:    59 RLVKADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCRKNP 118

Query:   121 TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEK 180
             ++KR++ T+S      +++D     K  +DE+ +T  +    C   +   Y  SK  +E+
Sbjct:   119 SLKRVVLTSSSSTVR-IRDDFDP--KIPLDESIWTSVE---LC-KRFQVWYALSKTLAEQ 171

Query:   181 ELLSYGSSXXXXXXXXXXXXXXDTNLP--YSSTPVSVIGGLCQLTNNEYVYQTLRDTEEI 238
                 +                   +LP    ST   V+G L +    ++ +         
Sbjct:   172 AAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLG-LLKGETEKFQWH-------- 222

Query:   239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLD 298
              G++  VHIDDV   HI   E  +  GR+ C++  +S  E+ S L   YP   I + +  
Sbjct:   223 -GQMGYVHIDDVARTHIVVFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIPKRFEK 281

Query:   299 VPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
             + +    +  +K++  G ++   L+ + DD I    + GYL
Sbjct:   282 LNRLHYDFDTSKIQSLGLKFK-SLEEMFDDCIASLVEQGYL 321

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
 Identities = 54/147 (36%), Positives = 82/147 (55%)

Query:     9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
             VCVTG  G++ SW++K LL +GY V  T+R N  D  K + L +L GA  RL  F++++ 
Sbjct:     8 VCVTGASGYIASWIVKLLLLRGYTVRATVR-NPMDTKKTNHLLTLEGASERLKLFKSDLL 66

Query:    69 DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
             +  +F+ AI+GCD VFH A+P+          +++  V     +   C K  +VKR+I T
Sbjct:    67 EEGSFDQAIEGCDGVFHTASPVSLTVTDPQTEMIDPAVNGTLNVLRTCAKVSSVKRVIVT 126

Query:   129 ASVLCASPLKEDGSAGYKDSIDETCYT 155
             +S   A+ L    S    D +DET +T
Sbjct:   127 SST--AATL----SINPNDVVDETVFT 147

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2012315 AT1G09510 [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 96/325 (29%), Positives = 157/325 (48%)

Query:     9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
             VCVTG  G+V SW++K LL +GY V  T+R +  D+ K + L +L GA+ +L  F+A++ 
Sbjct:     8 VCVTGASGYVASWIVKLLLLRGYTVRATVR-DPSDEKKTEHLLALDGAKEKLKLFKADLL 66

Query:    69 DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
             +  +FE AI+GCD VFH A+P+          +++  V     +   C K  +VKR+I T
Sbjct:    67 EEGSFEQAIEGCDAVFHTASPVSLTVTDPQIELIDPAVKGTLNVLKTCAKVSSVKRVIVT 126

Query:   129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSS 188
             +S+  A+ L  + + G  D +DE+C++ P+    C  + L  Y  SK  +E E   +   
Sbjct:   127 SSM--AAVLFREPTLGPNDLVDESCFSDPNF---CTEKKLW-YALSKTLAEDEAWRFAKE 180

Query:   189 XXXXXXXXXXXXXXDTNLPYSST-PVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHI 247
                              L  S T  V+VI  L    +N ++ +  R          LV +
Sbjct:   181 KGLDLVVINPGLVLGPLLKPSLTFSVNVIVELITGKDN-FINKDFR----------LVDV 229

Query:   248 DDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHI--KQEYLDVPKREIK 305
              DV  AHI   E PS +GR+      V+  +I   L++ +P+ ++  K E  ++     K
Sbjct:   230 RDVALAHIKAFETPSANGRYIIEGPVVTINDIEKILREFFPDLNLGNKGEASEIIPVIYK 289

Query:   306 WGGTKLEEKGFEYNYDLKMILDDSI 330
                 K++  G E+    +  L D+I
Sbjct:   290 LCVEKVKSLGIEFT-PTEATLRDTI 313

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 93/346 (26%), Positives = 159/346 (45%)

Query:     1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR-PNLEDKSKVDLLKSLPGAETR 59
             M  +    VCVTG  G++ SW++K LL +GY V  ++R PN  D  K + L +L GAE R
Sbjct:     1 MSSEEEKTVCVTGASGYIASWIVKLLLLRGYTVKASVRDPN--DPRKTEHLLALEGAEER 58

Query:    60 LIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS 119
             L  F+A + +  +F++AI GC+ VFH A+P  H        +++  V     + S C+K+
Sbjct:    59 LKLFKANLLEEGSFDSAIDGCEGVFHTASPFYHDVKDPQAELLDPAVKGTINVLSSCLKT 118

Query:   120 GTVKRLIYTASVLCASPLKEDGSAGYKDSI-DETCYTPPDHPLTCHNEYLRVYIESKMKS 178
              +VKR++ T+S+   +    +G     ++I DET +  PD+   C    L  Y+ SK  +
Sbjct:   119 SSVKRVVLTSSIAAVA---FNGMPRTPETIVDETWFADPDY---CRASKLW-YVLSKTLA 171

Query:   179 EKELLSYGSSXXXXXXXXXXXXXXDTNL-PYSSTPVSVIGGLCQLTNNEYVYQTLRDTEE 237
             E     +                    L P  +T  + +  L +        QT  +   
Sbjct:   172 ENAAWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGA------QTFPNAT- 224

Query:   238 ILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYL 297
               G    V++ DV  AHI   E P   GR+         +E+ + L   YP+F + ++  
Sbjct:   225 -FG---WVNVKDVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLPEKCA 280

Query:   298 D----VPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
             D    +P  ++     K E  G E+   L++ + ++++  R  G++
Sbjct:   281 DEKIYIPTYKVS--KEKAESLGVEF-VPLEVSIKETVESLRDKGFI 323

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2011741 AT1G76470 [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 90/339 (26%), Positives = 160/339 (47%)

Query:     8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
             KVCVTG  GF+ SWL+K LL +GY VH T+R   ++K+  D L+ L  A   L  F+A++
Sbjct:     6 KVCVTGAGGFIASWLVKFLLSRGYTVHGTVRDPCDEKN--DHLRKLDNASKNLKLFKADL 63

Query:    68 YDPDTFENAIQGCDFVFHVATPLQHIDGY--LYKNVVEACVGAAKKIASFCVKSGTVKRL 125
             +D +   +AI GC  VFH+A+P+   +G     + +++  +   K +   C ++  V+++
Sbjct:    64 FDDEGLFSAIDGCSGVFHIASPVP-FEGVPLTEEELIKPALTGTKNVLEACTET-KVQKV 121

Query:   126 IYTASVLCA--SPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL 183
             +  +S+     +P      A  +D   +T Y    H L     Y R Y  +K  +E+E L
Sbjct:   122 VVVSSIAAVVYNPKWPQDVAKDEDCWSDTQYL---HSL---EGYWRYYYLAKTLTEREAL 175

Query:   184 SYGSSXXXXXXXXXXXXXXDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP 243
              +                    L   ST  S   GL +      +   L D      +L 
Sbjct:   176 EWSKRNFADVVTLCPSVIIGPRL--QSTLNSSSLGLLKFIKGG-IKSLLSD------ELY 226

Query:   244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKRE 303
             LV + DV +A +   E    +GR+ C +  + +  +   L+  YP+ +  + + +V ++E
Sbjct:   227 LVDVRDVADALLLVYENREATGRYICNSHSLYTDSLMEKLKNMYPKRNFPESFTEVKEKE 286

Query:   304 IK-WGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLPQ 341
             ++     KL+  G+++   L+  +DDS+     +G LP+
Sbjct:   287 VRPLSAEKLKNLGWKFR-PLEETIDDSVVSFEAAGDLPK 324

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2012280 AT1G09500 [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 84/293 (28%), Positives = 138/293 (47%)

Query:     9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
             VCVTG  G++ SW++K LL +GY ++ T+R + +D+ K D L +L GA+ RL  F+A++ 
Sbjct:     8 VCVTGASGYIASWIVKLLLFRGYTINATVR-DPKDRKKTDHLLALDGAKERLKLFKADLL 66

Query:    69 DPDTFENAIQGCDFVFHVATPLQ-HIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
             D  +FE AI GC+ VFH A+P+   +       ++   V     +   C K  +VKR+I 
Sbjct:    67 DEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVIL 126

Query:   128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
             T+S+  A+ L  +   G  D +DET +T P        E  + Y+ SK  +E     +  
Sbjct:   127 TSSM--AAVLAPETKLGPNDVVDETFFTNPSFA----EERKQWYVLSKTLAEDAAWRFAK 180

Query:   188 SXXXXXXXXXXXXXXDTNL-PYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
                               L P  +  V+VI    +L   +  + T             V 
Sbjct:   181 DNEIDLIVLNPGLVTGPILQPTLNFSVAVI---VELMKGKNPFNTTHHR--------FVD 229

Query:   247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV 299
             + DV  AH+  +E PS +GR+      V+  +I + L++ +P+  I     D+
Sbjct:   230 VRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDI 282

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	341
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	2e-90
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	2e-63
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	1e-56
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	2e-49
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	4e-49
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	3e-39
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	8e-34
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	2e-33
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	8e-32
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	9e-28
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	6e-24
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	1e-20
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	9e-17
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	2e-16
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	1e-15
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-15
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	4e-14
cd08946	200	cd08946, SDR_e, extended (e) SDRs	2e-13
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	3e-12
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	5e-12
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	2e-11
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	2e-11
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	1e-10
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	2e-10
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	2e-09
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	6e-09
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	7e-09
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	2e-08
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	2e-07
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	6e-07
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	9e-07
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	1e-06
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	1e-06
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-06
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-06
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	3e-06
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	4e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	5e-06
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	7e-06
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	1e-05
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	1e-05
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	2e-05
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	2e-05
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	3e-05
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	3e-05
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	6e-05
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	6e-05
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	7e-05
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	1e-04
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	2e-04
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	4e-04
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	5e-04
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	6e-04
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	7e-04
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	8e-04
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	9e-04
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	0.001
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	0.002

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  272 bits (697), Expect = 2e-90
 Identities = 108/311 (34%), Positives = 165/311 (53%), Gaps = 21/311 (6%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  GF+GSWL+K+LL +GY V  T+R +  D+ KV  L  L GA+ RL  F+A++ 
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVR-DPGDEKKVAHLLELEGAKERLKLFKADLL 59

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           D  +F+ AI GCD VFHVA+P+        + ++E  V     +   C K+ +VKR+++T
Sbjct: 60  DYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFT 119

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S 187
           +SV        + + G    +DE+C++  D    C  +    Y  SK  +EK    +   
Sbjct: 120 SSVAAVVW---NPNRGEGKVVDESCWSDLDF---C-KKTKLWYALSKTLAEKAAWEFAEE 172

Query: 188 SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHI 247
           +GL++V +   +V G    P  S   S    L  L  N  +YQ         G L LVH+
Sbjct: 173 NGLDLVTVNPSLVVGPFLQP--SLNSSSQLILSLLKGNAEMYQ--------NGSLALVHV 222

Query: 248 DDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWG 307
           DDV +AHI   EKPS SGR+ C++  V+  E+A+ L + YP+++I  ++ D      +  
Sbjct: 223 DDVADAHILLYEKPSASGRYICSSHVVTRPELAALLAKKYPQYNIPTKFEDDQPGVARVK 282

Query: 308 --GTKLEEKGF 316
               KL++ GF
Sbjct: 283 LSSKKLKDLGF 293

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  204 bits (521), Expect = 2e-63
 Identities = 113/347 (32%), Positives = 185/347 (53%), Gaps = 26/347 (7%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEI 67
            CVTG  G++GSWL+K LL +GY VH TLR    D +K   LL      + RL  F A++
Sbjct: 13  YCVTGATGYIGSWLVKLLLQRGYTVHATLR----DPAKSLHLLSKWKEGD-RLRLFRADL 67

Query: 68  YDPDTFENAIQGCDFVFHVATPLQ--------HIDGYLYKNVVEACVGAAKKIASFCVKS 119
            +  +F+ A++GCD VFHVA  ++        +I+ Y+   V++  +     +   C+KS
Sbjct: 68  QEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS 127

Query: 120 GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSE 179
            TVKR+++T+S+  ++   +D +  ++  +DETC TP DH          VY+ SK+ +E
Sbjct: 128 KTVKRVVFTSSI--STLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGW-VYVLSKLLTE 184

Query: 180 KELLSYG-SSGLEVVALALGVVAGDTNLPY--SSTPVSVIGGLCQLTNNEYVYQTLRDTE 236
           +    Y   +G+++V++    VAG    P+   S P S+   L  +T +  ++  L    
Sbjct: 185 EAAFKYAKENGIDLVSVITTTVAG----PFLTPSVPSSIQVLLSPITGDSKLFSILSAVN 240

Query: 237 EILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY 296
             +G + LVHI+D+C+AHIF ME+    GR+ C       +E+ + L + YP  +I+   
Sbjct: 241 SRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRL 300

Query: 297 LDVPKREIK--WGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLPQ 341
            +  +  I       KL + GFEY Y ++ I+D +I C    G+LPQ
Sbjct: 301 DEEKRGSIPSEISSKKLRDLGFEYKYGIEEIIDQTIDCCVDHGFLPQ 347

Length = 353

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  187 bits (476), Expect = 1e-56
 Identities = 109/339 (32%), Positives = 185/339 (54%), Gaps = 27/339 (7%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  GF+GSWL+ +LL++GY V  T+R +  +  KV  L  LPGA TRL  ++A++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVR-DPANVKKVKHLLDLPGATTRLTLWKADLA 66

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
              +F++AI+GC  VFHVATP+          V++  V     I   C K+ TV+R+++T
Sbjct: 67  VEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFT 126

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLR--VYIESKMKSEKELLSYG 186
           +S    + ++E     Y    DE C++  D    C  + +   +Y  SK  +EK    Y 
Sbjct: 127 SSAGTVN-VEEHQKPVY----DEDCWSDLDF---CRRKKMTGWMYFVSKTLAEKAAWKYA 178

Query: 187 S-SGLEVVALALGVVAGDTNLPY--SSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP 243
           + +GL+ +++   +V G    P+  +S P S+I  L  +T NE  Y  ++  +       
Sbjct: 179 AENGLDFISIIPTLVVG----PFISTSMPPSLITALSLITGNEAHYSIIKQGQ------- 227

Query: 244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPK-- 301
            VH+DD+C AHIF  E P+  GR+ C++   +  ++A  L++ YPE++I   +  + +  
Sbjct: 228 FVHLDDLCNAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDL 287

Query: 302 REIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
           + +++   KL + GF + Y L+ + D +I+  R+ G +P
Sbjct: 288 KSVEFSSKKLTDLGFTFKYSLEDMFDGAIETCREKGLIP 326

Length = 351

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  167 bits (423), Expect = 2e-49
 Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 25/312 (8%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           V VTG  GFV S ++++LL++GY V  T+R   + K KV+ L  L     RL    A++ 
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVK-KVNHLLDLDAKPGRLELAVADLT 59

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGY---LYKNVVEACVGAAKKIASFCVKSGTVKRL 125
           D  +F+  I+GC  VFHVATP+         + K  +   + A K        + +VKR 
Sbjct: 60  DEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKA----AAAAKSVKRF 115

Query: 126 IYTASVLCASPLKEDGSAGYKDS---IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKEL 182
           + T+S       K +      D      E   + P            VY  SK  +EK  
Sbjct: 116 VLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAW-------VYAASKTLAEKAA 168

Query: 183 LSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK 241
             +   + ++++ +   +  G        TP S    +  +T NE V   L         
Sbjct: 169 WKFADENNIDLITVIPTLTIGTIFDS--ETPSSSGWAMSLITGNEGVSPALALIPPGY-- 224

Query: 242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPK 301
              VH+ D+C AHI C+E P   GR+ CT        +   L++ YP +    ++ D  +
Sbjct: 225 --YVHVVDICLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKYPSYTFPTDFPDQGQ 282

Query: 302 REIKWGGTKLEE 313
              K+   KL E
Sbjct: 283 DLSKFSSAKLLE 294

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  167 bits (424), Expect = 4e-49
 Identities = 103/334 (30%), Positives = 173/334 (51%), Gaps = 10/334 (2%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
             CV GG GF+ S LIK LL KGY V+TT+R + E++ K+  L++L      L  F A++
Sbjct: 11  TACVIGGTGFLASLLIKLLLQKGYAVNTTVR-DPENQKKIAHLRALQELGD-LKIFGADL 68

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            D ++FE  I GCD VFHVATP+         ++++  +     +   C K+ +VKR+I 
Sbjct: 69  TDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVIL 128

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
           T+S    S  K  G+      ++E  +T  +  LT        Y  SK  +EK    +  
Sbjct: 129 TSSAAAVSINKLSGTGLV---MNEKNWTDVEF-LTSEKPPTWGYPASKTLAEKAAWKFAE 184

Query: 188 -SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
            + ++++ +   ++AG +    S  P S+   +  +T NE++   L+  + + G + + H
Sbjct: 185 ENNIDLITVIPTLMAGPSLT--SDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITH 242

Query: 247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVP-KREIK 305
           ++DVC AHIF  EK S SGR+ C     S  E+A  L + YP++ +  ++ D P K ++ 
Sbjct: 243 VEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSKAKLI 302

Query: 306 WGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
               KL  +GF + Y ++ I D +++  +  G L
Sbjct: 303 ISSEKLISEGFSFEYGIEEIYDQTVEYFKAKGLL 336

Length = 338

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  140 bits (355), Expect = 3e-39
 Identities = 80/308 (25%), Positives = 128/308 (41%), Gaps = 28/308 (9%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAE- 66
            V VTG  GF+ S ++++LL  GY V  T+R +L   +K+  L    G   RL F   + 
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVR-SLSKSAKLKALLKAAGYNDRLEFVIVDD 59

Query: 67  IYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI 126
           +  P+ ++ A++G D+V HVA+P          +V++  V     +      +G+VKR++
Sbjct: 60  LTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVV 119

Query: 127 YTASVL-CASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEK---EL 182
            T+SV     P  ED          E  +          +  L  YI SK  +EK   E 
Sbjct: 120 LTSSVAAVGDPTAED----PGKVFTEEDWNDLT---ISKSNGLDAYIASKTLAEKAAWEF 172

Query: 183 LSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTL-RDTEEILGK 241
           +       E++ +  G V G  +L       S          NE + + L      I   
Sbjct: 173 VKENKPKFELITINPGYVLG-PSLLADELNSS----------NELINKLLDGKLPAIPPN 221

Query: 242 LP--LVHIDDVCEAHIFCMEKPSMSG-RFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLD 298
           LP   V + DV +AH+  +E P  +G RF  +    S  EIA  L++ +P+        +
Sbjct: 222 LPFGYVDVRDVADAHVRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQLTAPFPAPN 281

Query: 299 VPKREIKW 306
                I  
Sbjct: 282 PLMLSILV 289

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  126 bits (318), Expect = 8e-34
 Identities = 87/293 (29%), Positives = 147/293 (50%), Gaps = 20/293 (6%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  G++ SW++K LL +GY ++ T+R + +D+ K D L +L GA+ RL  F+A++ 
Sbjct: 8   VCVTGASGYIASWIVKLLLFRGYTINATVR-DPKDRKKTDHLLALDGAKERLKLFKADLL 66

Query: 69  DPDTFENAIQGCDFVFHVATPLQ-HIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
           D  +FE AI GC+ VFH A+P+   +       ++   V     +   C K  +VKR+I 
Sbjct: 67  DEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVIL 126

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
           T+S+  A+ L  +   G  D +DET +T P    +   E  + Y+ SK  +E     +  
Sbjct: 127 TSSM--AAVLAPETKLGPNDVVDETFFTNP----SFAEERKQWYVLSKTLAEDAAWRFAK 180

Query: 188 SG-LEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
              ++++ L  G+V G    P  +  V+VI    +L   +  + T             V 
Sbjct: 181 DNEIDLIVLNPGLVTGPILQPTLNFSVAVI---VELMKGKNPFNTTHHR--------FVD 229

Query: 247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV 299
           + DV  AH+  +E PS +GR+      V+  +I + L++ +P+  I     D+
Sbjct: 230 VRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDI 282

Length = 325

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  125 bits (316), Expect = 2e-33
 Identities = 99/353 (28%), Positives = 159/353 (45%), Gaps = 60/353 (16%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLR-PNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           VCVTG  G++ SWL+K LL +GY V  T+R PN  D  K + L +L GA+ RL  F+A +
Sbjct: 7   VCVTGASGYIASWLVKLLLQRGYTVKATVRDPN--DPKKTEHLLALDGAKERLHLFKANL 64

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            +  +F++ + GC+ VFH A+P  H        +++  V     +   C K  +VKR++ 
Sbjct: 65  LEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVV 124

Query: 128 TASVLCAS----PLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL 183
           T+S+   +    PL  D        +DET ++ P     C  E    Y+ SK  +E+   
Sbjct: 125 TSSMAAVAYNGKPLTPD------VVVDETWFSDPA---FC-EESKLWYVLSKTLAEEAAW 174

Query: 184 SYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEIL--- 239
            +   +G+++V +                P  VIG L Q T N          E IL   
Sbjct: 175 KFAKENGIDMVTI---------------NPAMVIGPLLQPTLNTSA-------EAILNLI 212

Query: 240 --------GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFH 291
                        V + DV  AHI   E PS SGR+      V  +E+   L + YP   
Sbjct: 213 NGAQTFPNASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQ 272

Query: 292 IKQEYLD----VPKREIKWGGTKLEEKGFEYNY-DLKMILDDSIKCGRKSGYL 339
           + ++  D    VP  ++    +K + K     +  L++ L D+++  ++ G+L
Sbjct: 273 LPEKCADDKPYVPTYQV----SKEKAKSLGIEFIPLEVSLKDTVESLKEKGFL 321

Length = 322

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  121 bits (304), Expect = 8e-32
 Identities = 86/287 (29%), Positives = 141/287 (49%), Gaps = 23/287 (8%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  G++ SW++K LL +GY V  T+R +L D+ K + L +L GA+ RL  F+A++ 
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVR-DLTDRKKTEHLLALDGAKERLKLFKADLL 66

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           +  +FE AI+GCD VFH A+P+          +++  +     + + C ++ +VKR+I T
Sbjct: 67  EESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILT 126

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS- 187
           +S   A+ L         D +DET ++ P     C  E    Y  SK+ +E     +   
Sbjct: 127 SST--AAVLFRQPPIEANDVVDETFFSDPS---LCR-ETKNWYPLSKILAENAAWEFAKD 180

Query: 188 SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN--NEYVYQTLRDTEEILGKLPLV 245
           +G+++V L  G + G    P  +  V +I       N  N   Y+              V
Sbjct: 181 NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYR-------------FV 227

Query: 246 HIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHI 292
            + DV  AHI  +E PS +GR+      +S  +I   L++ +P+  I
Sbjct: 228 DVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCI 274

Length = 322

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  110 bits (276), Expect = 9e-28
 Identities = 97/340 (28%), Positives = 162/340 (47%), Gaps = 39/340 (11%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  G++ SW++K LL++GY V  T+R    D  K   L+ L G + RLI  +A++ 
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRN--PDDPKNTHLRELEGGKERLILCKADLQ 70

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           D +  + AI GCD VFH A+P+        + +VE  V  AK + +   ++  VKR++ T
Sbjct: 71  DYEALKAAIDGCDGVFHTASPVTDDP----EQMVEPAVNGAKFVINAAAEA-KVKRVVIT 125

Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S 187
           +S+     +  D +   +  +DE+C++  D    C N     Y   KM +E+        
Sbjct: 126 SSI---GAVYMDPNRDPEAVVDESCWSDLDF---CKNTK-NWYCYGKMVAEQAAWETAKE 178

Query: 188 SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLR---DTEEILGKLPL 244
            G+++V L                PV V+G   Q T N  +Y  L+    + +    L  
Sbjct: 179 KGVDLVVL---------------NPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQ 223

Query: 245 VHID--DVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV--P 300
            ++D  DV  AH+   E PS SGR+          E+   L + +PE+ +  +  D   P
Sbjct: 224 AYVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNP 283

Query: 301 K-REIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
           + +  K+   K+++ G E+    K  L D++K  ++ G+L
Sbjct: 284 RAKPYKFTNQKIKDLGLEFT-STKQSLYDTVKSLQEKGHL 322

Length = 342

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 99.7 bits (249), Expect = 6e-24
 Identities = 77/274 (28%), Positives = 110/274 (40%), Gaps = 82/274 (29%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP 70
           VTG  GF+GS L++ LL +GY V   +R      S   LL  LP     +   E ++ D 
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRS----GSDAVLLDGLP-----VEVVEGDLTDA 53

Query: 71  DTFENAIQGCDFVFHVA----------TPLQHI--DGYLYKNVVEACVGAAKKIASFCVK 118
            +   A++GCD VFH+A            L     +G   +NV++A + A          
Sbjct: 54  ASLAAAMKGCDRVFHLAAFTSLWAKDRKELYRTNVEG--TRNVLDAALEAG--------- 102

Query: 119 SGTVKRLIYTASVLCASPLKEDGSAGYKDS--IDETCYTPPDHPLTCHNEYLRVYIESKM 176
              V+R+++T+S+          + G      IDET            N+Y R    SK+
Sbjct: 103 ---VRRVVHTSSI---------AALGGPPDGRIDETTPWNERPF---PNDYYR----SKL 143

Query: 177 KSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTE 236
            +E E+L   + GL+VV +    V G    P    P S                T  D  
Sbjct: 144 LAELEVLEAAAEGLDVVIVNPSAVFG----PGDEGPTS----------------TGLDVL 183

Query: 237 EIL-GKLP--------LVHIDDVCEAHIFCMEKP 261
           + L GKLP         V + DV E HI  MEK 
Sbjct: 184 DYLNGKLPAYPPGGTSFVDVRDVAEGHIAAMEKG 217

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 90.4 bits (224), Expect = 1e-20
 Identities = 70/282 (24%), Positives = 107/282 (37%), Gaps = 39/282 (13%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP 70
           VTGG GF+GS L+++LL  G+ V    R          L   L    + + F   ++ D 
Sbjct: 5   VTGGAGFIGSHLVERLLAAGHDVRGLDR----------LRDGLDPLLSGVEFVVLDLTDR 54

Query: 71  DTFENAIQGC-DFVFHVATPLQHIDGYL--YKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
           D  +   +G  D V H+A      D         ++  V     +      +G VKR ++
Sbjct: 55  DLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVF 113

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
            +SV                 IDE     P  PL         Y  SK+ +E+ L +Y  
Sbjct: 114 ASSVSVV------YGDPPPLPIDED--LGPPRPLN-------PYGVSKLAAEQLLRAYAR 158

Query: 188 S-GLEVVALALGVVAG-DTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV 245
             GL VV L    V G       SS  VS    + QL   E +     D  +       V
Sbjct: 159 LYGLPVVILRPFNVYGPGDKPDLSSGVVSAF--IRQLLKGEPIIVIGGDGSQT---RDFV 213

Query: 246 HIDDVCEAHIFCMEKPSMSGRFFCTN--VFVSSAEIASCLQQ 285
           ++DDV +A +  +E P   G F   +    ++  E+A  + +
Sbjct: 214 YVDDVADALLLALENPD-GGVFNIGSGTAEITVRELAEAVAE 254

Length = 314

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 78.1 bits (193), Expect = 9e-17
 Identities = 63/277 (22%), Positives = 107/277 (38%), Gaps = 65/277 (23%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           + VTGG GF+GS L+++LL +GY V    R            +S      R+ F E ++ 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRR----------RSESLNTGRIRFHEGDLT 50

Query: 69  DPDTFENAIQGC--DFVFHVATPLQHID-------GYLYKNVVEACVGAAKKIASFCVKS 119
           DPD  E  +     D V H+A     +         ++  NV+        ++     ++
Sbjct: 51  DPDALERLLAEVQPDAVIHLAA-QSGVGASFEDPADFIRANVL-----GTLRLLEAARRA 104

Query: 120 GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSE 179
           G VKR ++ +S         D        I E     P  PL+        Y  +K+ +E
Sbjct: 105 G-VKRFVFASSS-EVYGDVADP------PITEDT---PLGPLS-------PYAAAKLAAE 146

Query: 180 KELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPV--SVIGGLCQLTNNEYVYQTLRDTE 236
           + + +Y  + GL  V L L  V G    P +  P    VI           + + + + +
Sbjct: 147 RLVEAYARAYGLRAVILRLFNVYG----PGNPDPFVTHVIP---------ALIRRILEGK 193

Query: 237 EIL------GKLPLVHIDDVCEAHIFCMEKPSMSGRF 267
            IL       +   +++DDV  A +  +E P     +
Sbjct: 194 PILLLGDGTQRRDFLYVDDVARAILLALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score = 78.2 bits (193), Expect = 2e-16
 Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 31/288 (10%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRL 60
              +S+  VCV    G+VG WL+K+LL +GY VH  ++ N E +     ++ L   E RL
Sbjct: 1   SFDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEI-EKEIRGLSCEEERL 59

Query: 61  IFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKN--VVEACVGAAKKIASFCVK 118
             F+ +  D  +  +A++GC  +F    P      Y   +  +V+  V AA  +   C +
Sbjct: 60  KVFDVDPLDYHSILDALKGCSGLFCCFDP---PSDYPSYDEKMVDVEVRAAHNVLEACAQ 116

Query: 119 SGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKS 178
           + T++++++T+S L A   ++D  +  KD +DE  ++  +    C    L  +  +K  S
Sbjct: 117 TDTIEKVVFTSS-LTAVIWRDDNISTQKD-VDERSWSDQNF---CRKFKLW-HALAKTLS 170

Query: 179 EKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEE 237
           EK   +     G+ +V++  G++ G    P  +     + G  Q+  N            
Sbjct: 171 EKTAWALAMDRGVNMVSINAGLLMG----PSLTQHNPYLKGAAQMYEN------------ 214

Query: 238 ILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQ 285
             G L  V ++ + +AHI   E  S  GR+ C N  V++ E A  L Q
Sbjct: 215 --GVLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQ 260

Length = 297

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 76.1 bits (188), Expect = 1e-15
 Identities = 74/288 (25%), Positives = 111/288 (38%), Gaps = 96/288 (33%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVH------TTLRPNLEDKSKVDLLKSLPGAETRLI 61
           +V VTGG GF+GS L+++LL++G+ V       T  + NL +             +  + 
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEV------------KPNVK 48

Query: 62  FFEAEIYDPDTFENAIQGCDFVFHVAT----------PLQ----HIDGYLYKNVVEACVG 107
           F E +I D +  E A +G D+VFH A           P++    ++ G L  N++EA   
Sbjct: 49  FIEGDIRDDELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVNVLGTL--NLLEA--- 103

Query: 108 AAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS----IDETCYTPPDHPLTC 163
                     K+G VKR +Y +S           S+ Y D      DE     P  P   
Sbjct: 104 --------ARKAG-VKRFVYASS-----------SSVYGDPPYLPKDEDHPPNPLSP--- 140

Query: 164 HNEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAG---DTNLPYSSTPVSVIGGL 219
                  Y  SK   E     +    GL  V+L    V G   D N  Y+    +VI   
Sbjct: 141 -------YAVSKYAGELYCQVFARLYGLPTVSLRYFNVYGPRQDPNGGYA----AVIPIF 189

Query: 220 C-QLTNNE--YVY----QTLRDTEEILGKLPLVHIDDVCEAHIFCMEK 260
             +    E   +Y    QT RD           +++DV EA++     
Sbjct: 190 IERALKGEPPTIYGDGEQT-RD---------FTYVEDVVEANLLAATA 227

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 75.4 bits (186), Expect = 2e-15
 Identities = 80/281 (28%), Positives = 112/281 (39%), Gaps = 90/281 (32%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KV VTG  GFVGS +++ LL++G  V   +RP     S    L+ L   E      E ++
Sbjct: 2   KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPT----SDRRNLEGLD-VEI----VEGDL 52

Query: 68  YDPDTFENAIQGCDFVFHVA------TPLQHIDGYLYKNVVE---ACVGAAKKIASFCVK 118
            DP +   A+ GC  +FHVA       P       +Y   VE     + AA +       
Sbjct: 53  RDPASLRKAVAGCRALFHVAADYRLWAPDPEE---MYAANVEGTRNLLRAALEAG----- 104

Query: 119 SGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKS 178
              V+R++YT+SV     ++ DG        DET  +  D         +  Y  SK  +
Sbjct: 105 ---VERVVYTSSVATLG-VRGDG-----TPADETTPSSLDD-------MIGHYKRSKFLA 148

Query: 179 EKELLSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRD--- 234
           E+  L   +  GL VV     +V      P  STP   IG               RD   
Sbjct: 149 EQAALEMAAEKGLPVV-----IVN-----P--STP---IGP--------------RDIKP 179

Query: 235 --TEEI-----LGKLP--------LVHIDDVCEAHIFCMEK 260
             T  I      GK+P        LVH+DDV E H+  +E+
Sbjct: 180 TPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALER 220

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 71.6 bits (176), Expect = 4e-14
 Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 26/191 (13%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            V VTG +GF+GS L ++LL +G+             +   LL +      R  F   ++
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGH--EVRALDIYNSFNSWGLLDNAVHD--RFHFISGDV 56

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKN---VVEACV-GAAKKIASFCVKSGTVK 123
            D    E  ++ CD VFH+A  +  I  Y Y      VE  V G    + + CV     K
Sbjct: 57  RDASEVEYLVKKCDVVFHLAALIA-IP-YSYTAPLSYVETNVFGTLNVLEAACVLY--RK 112

Query: 124 RLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL 183
           R+++T++           S  Y  + D       DHPL   N+    Y  SK  +++   
Sbjct: 113 RVVHTST-----------SEVYGTAQDV--PIDEDHPLLYINKPRSPYSASKQGADRLAY 159

Query: 184 SYGSS-GLEVV 193
           SYG S GL V 
Sbjct: 160 SYGRSFGLPVT 170

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 64/267 (23%), Positives = 90/267 (33%), Gaps = 77/267 (28%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           + VTGG GF+GS L+++LL++G+                                  E+ 
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGH----------------------------------EVV 26

Query: 69  DPDTFENAIQGCDFVFH------VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTV 122
             D         D V H      V     + D     NVV         +     K+G V
Sbjct: 27  VIDRL-------DVVVHLAALVGVPASWDNPDEDFETNVV-----GTLNLLEAARKAG-V 73

Query: 123 KRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKEL 182
           KR +Y +S             G  + + E   TPP  PL+        Y  SK+ +E  L
Sbjct: 74  KRFVYASSASVY---------GSPEGLPEEEETPP-RPLS-------PYGVSKLAAEHLL 116

Query: 183 LSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK 241
            SYG S GL VV L L  V G    P     V+               + L         
Sbjct: 117 RSYGESYGLPVVILRLANVYGPGQRPRLDGVVN------DFIRRALEGKPLTVFGGGNQT 170

Query: 242 LPLVHIDDVCEAHIFCMEKPSMSGRFF 268
              +H+DDV  A +  +E P   G  +
Sbjct: 171 RDFIHVDDVVRAILHALENPLEGGGVY 197

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 66.2 bits (162), Expect = 3e-12
 Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 46/204 (22%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KV VTG  GF+G  L+ KLL +G  V          +  V   ++   +        AE+
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEV----------RIAVRNAENAEPSVVL-----AEL 45

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDG-------YLYKNV-VEACVGAAKKIASFCVKS 119
            D D+F +   G D V H+A    H+           Y+ V  E     A+  A    + 
Sbjct: 46  PDIDSFTDLFLGVDAVVHLAA-RVHVMNDQGADPLSDYRKVNTELTRRLARAAA----RQ 100

Query: 120 GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSE 179
           G VKR ++ +SV      K +G        DET   PP  P          Y  SK+++E
Sbjct: 101 G-VKRFVFLSSV------KVNGEGTVGAPFDET--DPPA-P-QDA------YGRSKLEAE 143

Query: 180 KELLS-YGSSGLEVVALALGVVAG 202
           + LL    S G+EVV L   +V G
Sbjct: 144 RALLELGASDGMEVVILRPPMVYG 167

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 65.0 bits (159), Expect = 5e-12
 Identities = 30/129 (23%), Positives = 61/129 (47%), Gaps = 10/129 (7%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            V V G  GF+G +++ +L  +G  V    R       ++ ++  L      ++F E ++
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYR-CEAYARRLLVMGDLGQ----VLFVEFDL 56

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            D ++   A++G D V ++   L     + +++V    V   +++A    ++G V+RLI+
Sbjct: 57  RDDESIRKALEGSDVVINLVGRLYETKNFSFEDVH---VEGPERLAKAAKEAG-VERLIH 112

Query: 128 TASVLCASP 136
             S L A  
Sbjct: 113 I-SALGADA 120

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 74/282 (26%), Positives = 113/282 (40%), Gaps = 61/282 (21%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKG-YIVHT-TLRPNLEDKSKVDLLKSLPGAETRLIFFEAE 66
             V GG GF+G  L+++LL +G   VH   +RP  E           P +  R+ F   +
Sbjct: 2   CLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFEL---------DPSSSGRVQFHTGD 52

Query: 67  IYDPDTFENAI--QGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKR 124
           + DP   E A   +G + VFH A+P    +  LY  V    V   + +   C K G VK+
Sbjct: 53  LTDPQDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVN---VQGTRNVIEACRKCG-VKK 108

Query: 125 LIYTAS---VLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKE 181
           L+YT+S   V     +  +G        DE+   P  H           Y E+K  +EK 
Sbjct: 109 LVYTSSASVVFNGQDII-NG--------DESLPYPDKH--------QDAYNETKALAEKL 151

Query: 182 LL--SYGSSGLEVVALALGVV--AGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEE 237
           +L  +   SGL   AL    +   GD  L         + GL +   N      + D   
Sbjct: 152 VLKANDPESGLLTCALRPAGIFGPGDRQL---------VPGLLKAAKNGKTKFQIGDGNN 202

Query: 238 ILGKLPLVHIDDVCEAHIFCMEK-------PSMSGR-FFCTN 271
           +       ++++V  AHI   +         +++G  FF TN
Sbjct: 203 LFD---FTYVENVAHAHILAADALLSSSHAETVAGEAFFITN 241

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 69/288 (23%), Positives = 106/288 (36%), Gaps = 68/288 (23%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAE 66
           V VTGG GF G  L+K+LL++G  Y+    + P  E  S        P  E    F + +
Sbjct: 2   VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSA----WQHPNIE----FLKGD 53

Query: 67  IYDPDTFENAIQGCDFVFHVATPLQHIDGY-LYKNVVEACVGAAKKIASFCVKSGTVKRL 125
           I D +  E A+ G D VFH A  +       LY  V    VG  + +   C + G V++ 
Sbjct: 54  ITDRNDVEQALSGADCVFHTAAIVPLAGPRDLYWEV---NVGGTQNVLDACQRCG-VQKF 109

Query: 126 IYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL-S 184
           +YT+S                 +I     T P  PL        +Y E+K  +E  +L +
Sbjct: 110 VYTSSS---------SVIFGGQNIHNGDETLPYPPLDSD-----MYAETKAIAEIIVLEA 155

Query: 185 YGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL 244
            G   L   AL                P  + G   Q      +   L +  E      +
Sbjct: 156 NGRDDLLTCALR---------------PAGIFGPGDQG-----LVPILFEWAEKGLVKFV 195

Query: 245 ----------VHIDDVCEAHIFCME---KPS-MSGRFFCTNVFVSSAE 278
                      ++ ++  AHI       K   +SG+ +    F++ AE
Sbjct: 196 FGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISGQTY----FITDAE 239

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 72/291 (24%), Positives = 126/291 (43%), Gaps = 41/291 (14%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETR-----LIFF 63
           VCVTGG  F+G  ++ +LL  GY V   +    EDK K+  ++     E       +   
Sbjct: 56  VCVTGGVSFLGLAIVDRLLRHGYSVRIAVD-TQEDKEKLREMEMF--GEMGRSNDGIWTV 112

Query: 64  EAEIYDPDTFENAIQGCDFVFHVA--TPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGT 121
            A + +P++   A  GC  VFH +       + GY  K++ E    A++ +   CV++ +
Sbjct: 113 MANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYT-KSMAELEAKASENVIEACVRTES 171

Query: 122 VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKE 181
           V++ ++T+S+L A   +++        IDE  ++  D    C +  L  Y   K+K+EK 
Sbjct: 172 VRKCVFTSSLL-ACVWRQNYPHDLPPVIDEESWS--DESF-CRDNKLW-YALGKLKAEKA 226

Query: 182 LLSYG-SSGLEVVALALGVVAGDTNLP--YSSTPVSVIGGLCQLTNNEYVYQTLRDTEEI 238
                   GL++  +   +V G    P  +     + I          Y    L+  +E+
Sbjct: 227 AWRAARGKGLKLATICPALVTG----PGFFRRNSTATIA---------Y----LKGAQEM 269

Query: 239 L--GKLPLVHIDDVCEAHIFC---MEKPSMSGRFFCTNVFVSSAEIASCLQ 284
           L  G L    ++ + EAH+     M   +  GR+ C +  VS  + A  L 
Sbjct: 270 LADGLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELA 320

Length = 367

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 49/190 (25%), Positives = 68/190 (35%), Gaps = 48/190 (25%)

Query: 11  VTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VTGG GF+G  +++ LL +G    V         D      L         + + E ++ 
Sbjct: 2   VTGGGGFLGRHIVRLLLREGELQEVRVF------DLRFSPELLEDFSKLQVITYIEGDVT 55

Query: 69  DPDTFENAIQGCDFVFHVA--------TPLQHIDGYLYK---NVVEACVGAAKKIASFCV 117
           D      A+QG D V H A             I     K   NV++ACV A         
Sbjct: 56  DKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG-------- 107

Query: 118 KSGTVKRLIYTASVLCASPLKEDGSAGYKDSI---DETCYTPPDHPLTCHNEYLRVYIES 174
               V+ L+YT+S+    P        Y   I   DET           H +    Y ES
Sbjct: 108 ----VRVLVYTSSMEVVGPNS------YGQPIVNGDETTPYES-----THQD---PYPES 149

Query: 175 KMKSEKELLS 184
           K  +EK +L 
Sbjct: 150 KALAEKLVLK 159

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 55/282 (19%), Positives = 99/282 (35%), Gaps = 58/282 (20%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI--- 67
           VTGG GF+G  L+K+LL+ G+ V   +R         + ++       R+   E ++   
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSE-SLGEAHERIEEAGLEADRVRVLEGDLTQP 61

Query: 68  ---YDPDTFENAIQGCDFVFHVA------TPLQHIDGYLYKNVVEACVGAAKKIASFCVK 118
                           D V H A       P +              +   + +     +
Sbjct: 62  NLGLSAAASRELAGKVDHVIHCAASYDFQAPNEDAW--------RTNIDGTEHVLELAAR 113

Query: 119 SGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKS 178
               +R  Y ++   A           + +I E   T  +      N Y     +SK ++
Sbjct: 114 LDI-QRFHYVSTAYVAGN--------REGNIRE---TELNPGQNFKNPYE----QSKAEA 157

Query: 179 EKELLSYGSSGLEVVALALGVVAGDTNLPYSST-PVSVIGGLCQLTNNEYVYQTLRDTEE 237
           E+ + +  +  + +      +V GD     S T  +  I GL +L N       L     
Sbjct: 158 EQLVRAAATQ-IPLTVYRPSIVVGD-----SKTGRIEKIDGLYELLNL------LAKLGR 205

Query: 238 IL-------GKLPLVHIDDVCEAHIFCMEKPSMSGR-FFCTN 271
            L        +L LV +D V +A ++  +KP  +G+ F  T+
Sbjct: 206 WLPMPGNKGARLNLVPVDYVADAIVYLSKKPEANGQIFHLTD 247

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 56.2 bits (136), Expect = 6e-09
 Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 31/118 (26%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPN-------LEDKSKVDLLKSLPGAETRLI 61
           V VTG +GF+GS L++ L+ +GY V   +  N       L D S  ++   +        
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWL-DTSPPEVKDKIE------- 52

Query: 62  FFEAEIYDPDTFENAIQGCDFVFHVA----------TPLQHID----GYLYKNVVEAC 105
               +I DPD+   A++GCD VFH+A           P  ++D    G L  NV++A 
Sbjct: 53  VVTGDIRDPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYVDTNVTGTL--NVLQAA 108

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 54.5 bits (132), Expect = 7e-09
 Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 42/183 (22%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KV V G  G VG  ++++LLD+GY V   +R    D S+ + L++  GAE        ++
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVR----DPSQAEKLEA-AGAEV----VVGDL 51

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            D ++   A++G D V   A              V+        +     K+G VKR + 
Sbjct: 52  TDAESLAAALEGIDAVISAAGSGGKGGPRTEA--VDYD--GNINLIDAAKKAG-VKRFVL 106

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
             S + A                      P HPL    E L  Y+++K K+E  L    +
Sbjct: 107 V-SSIGA--------------------DKPSHPL----EALGPYLDAKRKAEDYLR---A 138

Query: 188 SGL 190
           SGL
Sbjct: 139 SGL 141

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 66/310 (21%), Positives = 101/310 (32%), Gaps = 73/310 (23%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KV VTG  GF+GS ++++L+  G+ V             V L +S  GA   L    A++
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEV-------------VGLARSDAGAAK-LEAAGAQV 47

Query: 68  Y-----DPDTFENAIQGCDFVFHVAT--PLQHID--GYLYKNVVEACVGAAKKIASFCVK 118
           +     D D    A    D V H+A      +      + +  +EA   A +        
Sbjct: 48  HRGDLEDLDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALR-------- 99

Query: 119 SGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKS 178
            GT K LIYT+ +    P             DE     P  P              +  S
Sbjct: 100 -GTGKPLIYTSGIWLLGPTGGQEE-------DEEAPDDPPTPAA------------RAVS 139

Query: 179 EKELLSYGSSGLEVVALAL-GVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEE 237
           E   L     G+    + L  VV G  +  +       +  L  +   + V   + D + 
Sbjct: 140 EAAALELAERGVRASVVRLPPVVHGRGDHGF-------VPMLIAIAREKGVSAYVGDGKN 192

Query: 238 ILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCT-NVFVSSAEIASCLQQNYPEFHIKQEY 296
              + P VH DD    +   +EK      +       +   +IA           I    
Sbjct: 193 ---RWPAVHRDDAARLYRLALEKGKAGSVYHAVAEEGIPVKDIAE---------AIG-RR 239

Query: 297 LDVPKREIKW 306
           L VP   I  
Sbjct: 240 LGVPVVSIPA 249

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 26/128 (20%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP 70
           VTG  G +G+ +++ LL K   V   +R N E         +  G E R   ++    DP
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVR-NPEKAKA----FAADGVEVRQGDYD----DP 53

Query: 71  DTFENAIQGCDFVFHVATP--LQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           +T E A +G D +  ++       I    +KN ++A             ++G VK ++Y 
Sbjct: 54  ETLERAFEGVDRLLLISPSDLEDRIQ--QHKNFIDA-----------AKQAG-VKHIVYL 99

Query: 129 ASVLCASP 136
            S   A  
Sbjct: 100 -SASGADE 106

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 49.7 bits (119), Expect = 6e-07
 Identities = 64/301 (21%), Positives = 102/301 (33%), Gaps = 91/301 (30%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ +TG +GF+G  LI +L                        K     +  + F++ E 
Sbjct: 2   KILITGAKGFIGKNLIARL------------------------KEQK--DDDIFFYDRE- 34

Query: 68  YDPDTFENAIQGCDFVFHVA---TPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKR 124
            D    ++ +QG DF+FH+A    P                VG  +++     ++G    
Sbjct: 35  SDESELDDFLQGADFIFHLAGVNRPKDE------AEFESGNVGLTERLLDALTRNGK--- 85

Query: 125 LIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLS 184
                 +L +S            SI      P              Y +SK+ +E+ L  
Sbjct: 86  ---KPPILLSS------------SIQAALDNP--------------YGKSKLAAEELLQE 116

Query: 185 YGS-SGLEVVALALGVVAGDTNLP-YSSTPVSVIGGLC-QLTNNEYVYQTLRDTEEILGK 241
           Y   +G  V    L  V G    P Y+S     +   C  +  +  +       E     
Sbjct: 117 YARETGAPVYIYRLPNVFGKWCRPNYNS----AVATFCYNIARDLPIQINDPAAE----- 167

Query: 242 LPLVHIDDVCEAHIFCME-KPSMSGRFFCTNVFVSSA---EIASCLQQNYPEFHIKQEYL 297
           L LV+IDDV +  I  +E  P+ SG  F   + V      EIA  L +       K+   
Sbjct: 168 LTLVYIDDVVDELIQLLEGAPTYSGG-FDQVLPVYKVTVGEIAELLYK------FKESRD 220

Query: 298 D 298
            
Sbjct: 221 T 221

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 49.4 bits (118), Expect = 9e-07
 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 13/125 (10%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            V +TGG G+ G  L   L   G  VH  L     D  +    + LP     + F +A++
Sbjct: 1   SVLITGGGGYFGFRLGCALAKSG--VHVILF----DIRRPQ--QELPEG---IKFIQADV 49

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEAC-VGAAKKIASFCVKSGTVKRLI 126
            D    E A+ G D VFH+A+        L + ++E   V   + I   CV+   V RLI
Sbjct: 50  RDLSQLEKAVAGVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRR-RVPRLI 108

Query: 127 YTASV 131
           YT++ 
Sbjct: 109 YTSTF 113

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 13/101 (12%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP 70
           V G  G  G  L+K+LL +G+ V    R                     +   + +++D 
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSR------------NPSKAPAPGVTPVQKDLFDL 50

Query: 71  DTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKK 111
                A+ G D V   A   +  D    K++++A   A  +
Sbjct: 51  ADLAEALAGVDAVV-DAFGARPDDSDGVKHLLDAAARAGVR 90

Length = 182

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 72/305 (23%), Positives = 110/305 (36%), Gaps = 115/305 (37%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-----LLKSLP-GAETRLI 61
           KV VTGG G++GS  + +LL+ GY V             +D       ++LP   + R+ 
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVV-----------LDNLSNGHREALPRIEKIRIE 49

Query: 62  FFEAEIYDPD----TF-ENAIQGCDFVFH----------VATPLQH----IDGYLYKNVV 102
           F+E +I D       F E+ I   D V H          V  PL++    + G L  N++
Sbjct: 50  FYEGDIRDRAALDKVFAEHKI---DAVIHFAALKAVGESVQKPLKYYDNNVVGTL--NLL 104

Query: 103 EACVGAAKKIASFCVKSGTVKRLIY--TASVL---CASPLKEDGSAGYKDSIDETCYTPP 157
           EA                 VK  ++  +A+V       P+ E                  
Sbjct: 105 EAMRAHG------------VKNFVFSSSAAVYGEPETVPITE------------------ 134

Query: 158 DHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVI 216
           + PL   N     Y  +K+  E+ L     + GL  V L     AG       + P  +I
Sbjct: 135 EAPLNPTN----PYGRTKLMVEQILRDLAKAPGLNYVILRYFNPAG-------AHPSGLI 183

Query: 217 GGLCQLTNN--EYVYQTLRDTEEILGKLP-------------------LVHIDDVCEAHI 255
           G   Q+ NN   YV Q        LG+                      +H+ D+ +AH+
Sbjct: 184 GEDPQIPNNLIPYVLQVA------LGRREKLAIFGDDYPTPDGTCVRDYIHVVDLADAHV 237

Query: 256 FCMEK 260
             +EK
Sbjct: 238 LALEK 242

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 48.4 bits (115), Expect = 2e-06
 Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 21/145 (14%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ VTG  GFVG  ++++LL +G+ V   +R    +      L    G E  L     ++
Sbjct: 2   KILVTGATGFVGGAVVRELLARGHEVRAAVR----NPEAAAALA--GGVEVVL----GDL 51

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            DP +     +G D V  + + L           V A V AA+   +       VK  + 
Sbjct: 52  RDPKSLVAGAKGVDGVLLI-SGLLDGSDAFRAVQVTAVVRAAEAAGA------GVKHGVS 104

Query: 128 TASVLCASPLKEDGSAGYKDSIDET 152
             SVL A        +    +    
Sbjct: 105 -LSVLGA---DAASPSALARAKAAV 125

Length = 275

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 13/83 (15%)

Query: 9  VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
          + VTGG GF+GS L+ +LL++G  V   +  NL               E           
Sbjct: 2  ILVTGGAGFIGSHLVDRLLEEGNEV--VVVDNLS-------SGRRENIEPEFENKAFRFV 52

Query: 69 DPDTFENAI----QGCDFVFHVA 87
            D  + A     +  D VFH+A
Sbjct: 53 KRDLLDTADKVAKKDGDTVFHLA 75

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 14/119 (11%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           V VTG  G+VG  L+ +LL +G+ V   +R         + L   P +E R+     ++ 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVR-------SPEKLADRPWSE-RVTVVRGDLE 52

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
           DP++   A++G D  +++   +     +      EA   AA+  A     +G VKR+IY
Sbjct: 53  DPESLRAALEGIDTAYYLVHSMGSGGDF-----EEADRRAARNFARAARAAG-VKRIIY 105

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 47/181 (25%), Positives = 74/181 (40%), Gaps = 28/181 (15%)

Query: 11  VTGGEGFVGSWLIKKLLDKG------YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFE 64
           VTGG GF+G  +I+ LL++        ++     P L +  +    K      T +   E
Sbjct: 4   VTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGK------TYVTDIE 57

Query: 65  AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKR 124
            +I D      A QG   V H A  +       Y+ + E  V   + +   CV++  VKR
Sbjct: 58  GDIKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQNN-VKR 116

Query: 125 LIYTASV-LCASPLKEDGS-AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKEL 182
           L+YT+S+ +     K      G +D+  E   TPP             Y  SK+ +E  +
Sbjct: 117 LVYTSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPP-------------YASSKLLAENIV 163

Query: 183 L 183
           L
Sbjct: 164 L 164

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 64/207 (30%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGY----IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFE 64
           + + G  GF+G  L ++LL++G+    +V  T R + ED+  V ++             E
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVV-------------E 47

Query: 65  AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLY--------KNVVEACVGAAKKIASFC 116
            ++ D D+  +A+QG D V H+A      D   +        +NV+EA            
Sbjct: 48  GDLRDLDSLSDAVQGVDVVIHLAGA--PRDTRDFCEVDVEGTRNVLEAA----------- 94

Query: 117 VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKM 176
            K   VK  I+ +S+             Y D  +ET  +P              Y+  K 
Sbjct: 95  -KEAGVKHFIFISSL-----------GAYGDLHEETEPSPSSP-----------YLAVKA 131

Query: 177 KSEKELLSYGSSGLEVVALALGVVAGD 203
           K+E  L       L    +  GV+ GD
Sbjct: 132 KTEAVLREA---SLPYTIVRPGVIYGD 155

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 46.9 bits (112), Expect = 7e-06
 Identities = 71/367 (19%), Positives = 118/367 (32%), Gaps = 82/367 (22%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVH---TTLRP----NLEDKSKVDLLKSLPGAETRL 60
           +V +TGG GF+GS L +  L +G+ V      +R     NL           +       
Sbjct: 2   RVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVR------ 55

Query: 61  IFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDG-----YLYK-------NVVEACVGA 108
            F   +I + +  E+  +  D + H A               ++       NV+EA    
Sbjct: 56  -FVHGDIRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNALGTLNVLEAARQH 114

Query: 109 AKKIASFCVKSGTVKRLIYTASVLCASPLKE-------DGSAGYKDSIDETCYTPPDHPL 161
           A   A F   S T K  +Y        PL+E                I E+      H L
Sbjct: 115 APN-APFIFTS-TNK--VYGDL-PNYLPLEELETRYELAPEGWSPAGISESFPLDFSHSL 169

Query: 162 TCHNEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAGDTNLPYSSTPV--SVIGG 218
                    Y  SK  +++ +  YG   GL+ V    G + G    P          +  
Sbjct: 170 ---------YGASKGAADQYVQEYGRIFGLKTVVFRCGCLTG----PRQFGTEDQGWVAY 216

Query: 219 LCQ--LTNNEYVY-----QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM-SGRFFCT 270
             +  +T           + +RD         ++H  D+   ++   + P    G  F  
Sbjct: 217 FLKCAVTGKPLTIFGYGGKQVRD---------VLHSADLVNLYLRQFQNPDRRKGEVF-- 265

Query: 271 NV---FVSSAEIASCLQQNYPEFHIKQEYLDVPKRE--IKW---GGTKLEEK-GFEYNYD 321
           N+     +S  +   +         K E      R     W      K++EK G++   D
Sbjct: 266 NIGGGRENSVSLLELIALCEEITGRKMESYKDENRPGDQIWYISDIRKIKEKPGWKPERD 325

Query: 322 LKMILDD 328
            + IL +
Sbjct: 326 PREILAE 332

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 80/316 (25%), Positives = 129/316 (40%), Gaps = 69/316 (21%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFE--AEIY 68
           VTGG GF+GS L+K L ++G            D   VD L +  G + + +     A+  
Sbjct: 4   VTGGAGFIGSNLVKALNERGI----------TDILVVDNLSN--GEKFKNLVGLKIADYI 51

Query: 69  DPDTFENAIQG------CDFVFH---VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS 119
           D D F++ ++        + +FH    +   +    Y+  N  +      K++  +C++ 
Sbjct: 52  DKDDFKDWVRKGDENFKIEAIFHQGACSDTTETDGKYMMDNNYQ----YTKELLHYCLEK 107

Query: 120 GTVKRLIY--TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMK 177
               R IY  +A+V        +GS G+ + I ET    P          L VY  SK+ 
Sbjct: 108 KI--RFIYASSAAVY------GNGSLGFAEDI-ETPNLRP----------LNVYGYSKLL 148

Query: 178 SEKELLSYGSSGLE-VVALALGVVAGDTNLPYSSTPVSVIGGLC-QLTNNEYV-----YQ 230
            ++    +G   L  VV L    V G     +     SV+  L  Q+   E V       
Sbjct: 149 FDQWARRHGKEVLSQVVGLRYFNVYG-PREYHKGRMASVVFHLFNQIKAGEKVKLFKSSD 207

Query: 231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSA----EIASCLQQN 286
              D E+       V++ DV + ++F +E PS+SG F   NV    A    ++AS   + 
Sbjct: 208 GYADGEQ---LRDFVYVKDVVKVNLFFLENPSVSGIF---NVGTGRARSFNDLASATFKA 261

Query: 287 Y-PEFHIKQEYLDVPK 301
              E  I  EY+D P+
Sbjct: 262 LGKEVKI--EYIDFPE 275

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 8  KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
          +  +TG  G  GS+L + LL+KGY VH  +R +    +    +  L   + R+     ++
Sbjct: 1  RALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTDR--IDHLYINKDRITLHYGDL 58

Query: 68 YDPDTFENAIQGC--DFVFHVA 87
           D  +   AI+    D ++H+A
Sbjct: 59 TDSSSLRRAIEKVRPDEIYHLA 80

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 18/103 (17%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVH-----TTLRPNLEDKSKVDLLKSLPGAETRLIF 62
           +V VTG  GF GSWL   L + G  V          PNL + + +D   S     TR   
Sbjct: 6   RVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNKIS----STR--- 58

Query: 63  FEAEIYDPDTFENAIQGC--DFVFHVATPLQHIDGYLYKNVVE 103
              +I D +    AI+    + VFH+A   Q +    YK+ VE
Sbjct: 59  --GDIRDLNALREAIREYEPEIVFHLAA--QPLVRLSYKDPVE 97

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 57/207 (27%), Positives = 76/207 (36%), Gaps = 42/207 (20%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KV +TGG G +GS LI+ LL++G+     +  N     + + L   P     L   E  I
Sbjct: 2   KVLITGGAGQIGSHLIEHLLERGH--QVVVIDNFA-TGRREHLPDHPN----LTVVEGSI 54

Query: 68  YDPDTFENAIQGC--DFVFHVATPLQHIDGYLYKNVVEACVG------AAKKIASFCVKS 119
            D    +        D V H A   +  D + Y++ +   VG      AAKK        
Sbjct: 55  ADKALVDKLFGDFKPDAVVHTAAAYKDPDDW-YEDTLTNVVGGANVVQAAKKAG------ 107

Query: 120 GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSE 179
             VKRLIY  + LC          G K           DHP          Y  SK   E
Sbjct: 108 --VKRLIYFQTALC---------YGLKPMQQP---IRLDHPRAPPGS---SYAISKTAGE 150

Query: 180 KELLSYGSSGLEVVALALGVVAGDTNL 206
             L     SG++ V   L  V G  N+
Sbjct: 151 YYLE---LSGVDFVTFRLANVTGPRNV 174

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 21/88 (23%)

Query: 8  KVCVTGGEGFVGSWLIKKLLDKGYIV------HTTLRPNLEDKSKVDLLKSLPGAETRLI 61
          ++ +TGG GF+GS L  +LL+ G+ V       T  + N+E       L   P       
Sbjct: 2  RILITGGAGFLGSHLCDRLLEDGHEVICVDNFFTGRKRNIE------HLIGHP----NFE 51

Query: 62 FFEAEIYDPDTFENAIQGCDFVFHVATP 89
          F   ++ +P   E      D ++H+A P
Sbjct: 52 FIRHDVTEPLYLE-----VDQIYHLACP 74

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 45.1 bits (107), Expect = 3e-05
 Identities = 47/212 (22%), Positives = 81/212 (38%), Gaps = 25/212 (11%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYI-VHTTLRPNLEDKSKVDLLKSLPG-------AETR 59
            V +TG  GF+G++L+ +LLD+    V   +R   ++ +   L K+          +  R
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADR 61

Query: 60  LIFFEAEIYDPD------TFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIA 113
           +     ++ +PD      T++   +  D + H A  + H+  + Y  +  A V    ++ 
Sbjct: 62  VEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNHV--FPYSELRGANVLGTAEVL 119

Query: 114 SFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIE 173
                +G  K L Y +S+               D I  T        L     Y R    
Sbjct: 120 RLAA-TGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRN--VGQGL--AGGYGR---- 170

Query: 174 SKMKSEKELLSYGSSGLEVVALALGVVAGDTN 205
           SK  +EK +   G  GL V     G + GD+ 
Sbjct: 171 SKWVAEKLVREAGDRGLPVTIFRPGYITGDSR 202

Length = 382

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 43.7 bits (104), Expect = 6e-05
 Identities = 54/270 (20%), Positives = 91/270 (33%), Gaps = 53/270 (19%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTT--------------LRPNLEDKSKVDLLKSLPGA 56
           +TG  GF+G  L++KLL     V                 LR  L      D LK+L   
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALE-- 58

Query: 57  ETRLIFFEAEIYDPD------TFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAK 110
             R+I    ++ +P+       F+   +  D + H A  +  +    Y ++    V   +
Sbjct: 59  --RIIPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFV--EPYSDLRATNVLGTR 114

Query: 111 KIASFCVKSGTVKRLIY--TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYL 168
           ++     K        +  TA V      +  G    K    +     P       N Y 
Sbjct: 115 EVLRLA-KQMKKLPFHHVSTAYVNG----ERGGLLEEKPYKLDE--DEPALLGGLPNGYT 167

Query: 169 RVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPY----SSTPVSVIGGLCQLTN 224
           +    SK  +E+ +      GL VV     ++ G++   +       P  ++GG      
Sbjct: 168 Q----SKWLAEQLVREAA-GGLPVVIYRPSIITGESRTGWINGDDFGPRGLLGG------ 216

Query: 225 NEYVYQTLRD-TEEILGKLPLVHIDDVCEA 253
                  L D   +   +L LV +D V  A
Sbjct: 217 --AGLGVLPDILGDPDARLDLVPVDYVANA 244

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 13/103 (12%)

Query: 11  VTGGEGFVGSWLIKKLL-DKGYIVHT-TLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           V G  G  G  +++ LL D G+ V   T  P+         L + PG E      + ++ 
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTRDPS---SPAAKALAA-PGVEV----VQGDLD 54

Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLY---KNVVEACVGA 108
           DP++ E A++G   VF V    +          KNVV+A   A
Sbjct: 55  DPESLEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRA 97

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 43.7 bits (104), Expect = 7e-05
 Identities = 70/294 (23%), Positives = 104/294 (35%), Gaps = 96/294 (32%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KV VTGG G++GS  +++LL  G+ V      NL        L  L        F+E ++
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVVL--DNLS-NGHKIALLKLQF-----KFYEGDL 53

Query: 68  YDP----DTFENAIQGCDFVFH----------VATPLQHIDGYLYKNVVEACVGAAKKIA 113
            D       FE      D V H          V  PL++     Y N V   VG    I 
Sbjct: 54  LDRALLTAVFEE--NKIDAVVHFAASISVGESVQNPLKY-----YDNNV---VGTLNLIE 103

Query: 114 SFCVKSGTVKRLIY--TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVY 171
           +  +++G VK+ I+  TA+V         G       I ET    P +P          Y
Sbjct: 104 A-MLQTG-VKKFIFSSTAAVY--------GEPT-TSPISETSPLAPINP----------Y 142

Query: 172 IESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE---- 226
             SK+ SE+ L     ++  +VV L    VAG       + P   +G   Q         
Sbjct: 143 GRSKLMSEEILRDAAKANPFKVVILRYFNVAG-------ACPDGTLG---QRYPGATLLI 192

Query: 227 -YVYQTLRDTEEILGKLP-------------------LVHIDDVCEAHIFCMEK 260
               +        LGK                      +H+DD+ +AH+  ++ 
Sbjct: 193 PVAAEA------ALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKY 240

Length = 329

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 10/102 (9%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP 70
           VTG  G +GS +   LL+ G  V   +R       +   L +  GAE        ++ DP
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVR----SDERAAALAAR-GAEV----VVGDLDDP 53

Query: 71  DTFENAIQGCDFVFHVATPLQHIDGY-LYKNVVEACVGAAKK 111
                A+ G D VF +A P    D    Y    EA   A ++
Sbjct: 54  AVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALRE 95

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 54/274 (19%), Positives = 81/274 (29%), Gaps = 73/274 (26%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ + GG  F+G  L+++LL  G+ V    R   +          LP     +     + 
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKP--------DLPE---GVEHIVGDR 50

Query: 68  YDPDTFENAIQGCDF--VFHV--ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK 123
            D D  E  + G DF  V      TP Q          VE  + A K         G VK
Sbjct: 51  NDRDALEELLGGEDFDVVVDTIAYTPRQ----------VERALDAFK---------GRVK 91

Query: 124 RLIYTASVLCASPLKEDGSAGYKDS---IDETCYTPPDHPLTCHNEYLRVYIESKMKSEK 180
           + I+ +S            + Y      I E+  TP   P          Y   K  +E 
Sbjct: 92  QYIFISSA-----------SVYLKPGRVITES--TPLREPDAVGLSDPWDYGRGKRAAED 138

Query: 181 ELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEIL- 239
            L+           +    + G  +                     Y +  L     IL 
Sbjct: 139 VLIEAA--AFPYTIVRPPYIYGPGDYTGRLA---------------YFFDRLARGRPILV 181

Query: 240 ---GKLP--LVHIDDVCEAHIFCMEKPSMSGRFF 268
              G      +H+ D+  A +     P   G  F
Sbjct: 182 PGDGHSLVQFIHVKDLARALLGAAGNPKAIGGIF 215

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 16/87 (18%)

Query: 8  KVCVTGGEGFVGSWLIKKLLD-----KGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIF 62
          KV VTG  GF GSWL   LL+      GY +     PNL      +LL      +    F
Sbjct: 6  KVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNL-----FELLN--LAKKIEDHF 58

Query: 63 FEAEIYDPDTFENAIQGC--DFVFHVA 87
             +I D      AI     + VFH+A
Sbjct: 59 --GDIRDAAKLRKAIAEFKPEIVFHLA 83

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score = 41.2 bits (97), Expect = 5e-04
 Identities = 70/287 (24%), Positives = 110/287 (38%), Gaps = 77/287 (26%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAE--TRLIFFEA 65
           K+ VTGG G++GS  +++LL+ G+ V   +  NL + S+    ++LP  E  T + F E 
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGHEV--VILDNLSNGSR----EALPRGERITPVTFVEG 54

Query: 66  EIYDPDTFENAI--QGCDFVFH----------VATPLQHIDGYLYKNVVEACVGAAKKIA 113
           ++ D +  +        D V H          V  PL+    Y   NVV         + 
Sbjct: 55  DLRDRELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLK----YYRNNVVGTLN-----LL 105

Query: 114 SFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIE 173
               ++G VK+ I+++S           +A Y +    +     D PL   N Y R    
Sbjct: 106 EAMQQAG-VKKFIFSSS-----------AAVYGEP--SSIPISEDSPLGPINPYGR---- 147

Query: 174 SKMKSEKELLSYGSS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE----- 226
           SK+ SE+ L     +      V L    VAG       + P   IG   +          
Sbjct: 148 SKLMSEQILRDLQKADPDWSYVILRYFNVAG-------AHPSGDIG---EDPPGITHLIP 197

Query: 227 YVYQT---LRDTEEILG-KLP---------LVHIDDVCEAHIFCMEK 260
           Y  Q     RD   I G   P          +H+ D+ +AH+  +E 
Sbjct: 198 YACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEY 244

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 29/157 (18%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL-PGAETRLIFFEAE 66
           KV +TG  GFVG  L ++LL         L         +D++    P    R+     +
Sbjct: 2   KVLITGASGFVGQRLAERLLSDVPNERLIL---------IDVVSPKAPSGAPRVTQIAGD 52

Query: 67  IYDPDTFENAIQG-CDFVFHVATPLQHIDGY------LYKNVVEACVGAAKKIASFCVKS 119
           +  P   E    G  D VFH+A     + G       L   V    V   + +     K+
Sbjct: 53  LAVPALIEALANGRPDVVFHLA---AIVSGGAEADFDLGYRV---NVDGTRNLLEALRKN 106

Query: 120 GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTP 156
           G   R ++T+S+        +         D T   P
Sbjct: 107 GPKPRFVFTSSLAVYGLPLPNP------VTDHTALDP 137

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 32/173 (18%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTT---------------LRPNLEDKSKVDLLKSL 53
           V +TG  GF+G  L++KLL     +                  LR  L+DK         
Sbjct: 3   VLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNLN 62

Query: 54  PGAETRLIFFEAEIYDPDTF-----ENAIQGC-DFVFHVATPLQHIDGYLYKNVVEACVG 107
           P  E++++  E ++ +P+          +    + + H A  +   +       +   V 
Sbjct: 63  PLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDER--LDEALSINVL 120

Query: 108 AAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP 160
              ++     +   +K  ++ ++       +          I+E  Y PP  P
Sbjct: 121 GTLRLLELAKRCKKLKAFVHVSTAYVNGDRQL---------IEEKVYPPPADP 164

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 40.3 bits (95), Expect = 8e-04
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 7/84 (8%)

Query: 9  VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK--VDLLKSLPGAE-TRLIFFEA 65
          + VTGG G++GS  + +LL  GY V   +  NL++ S+  +  +K L G     L+F + 
Sbjct: 8  ILVTGGAGYIGSHTVLQLLLAGYKVV--VIDNLDNSSEEALRRVKELAGDLGDNLVFHKV 65

Query: 66 EIYDPDTFEN--AIQGCDFVFHVA 87
          ++ D +  E   A    D V H A
Sbjct: 66 DLRDKEALEKVFASTRFDAVIHFA 89

Length = 352

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 40.4 bits (95), Expect = 9e-04
 Identities = 28/112 (25%), Positives = 41/112 (36%), Gaps = 25/112 (22%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP 70
           V G  G +G  + ++L  +G+ V    R           L  LPG E       A+  D 
Sbjct: 4   VLGASGPIGREVARELRRRGWDVRLVSR-------SGSKLAWLPGVEI----VAADAMDA 52

Query: 71  DTFENAIQGCDFVFHVATPLQHIDGY---------LYKNVVEACVGAAKKIA 113
            +   A +G D ++H A P      Y         L +NVV A      K+ 
Sbjct: 53  SSVIAAARGADVIYHCANP-----AYTRWEELFPPLMENVVAAAEANGAKLV 99

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 40.2 bits (95), Expect = 0.001
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 11/86 (12%)

Query: 8  KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK----SKVDLLKSLPGAETRLIFF 63
          K+ VTGG GF+GS  ++ LL+K          NL DK      ++ L+ +  +  R  F 
Sbjct: 2  KILVTGGAGFIGSNFVRYLLNKYPDYKII---NL-DKLTYAGNLENLEDV-SSSPRYRFV 56

Query: 64 EAEIYDPDTFENAIQ--GCDFVFHVA 87
          + +I D +  +   +    D V H A
Sbjct: 57 KGDICDAELVDRLFEEEKIDAVIHFA 82

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 9/136 (6%)

Query: 5   SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFE 64
           +N  + +TGG G  G   I +LL+  Y     +     D+ K   ++    A   L FF 
Sbjct: 3   NNKSILITGGTGSFGKAFISRLLEN-YNPKK-IIIYSRDELKQWEMQQKFPAP-CLRFFI 59

Query: 65  AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEAC---VGAAKKIASFCVKSGT 121
            ++ D +    A++G D+V H A  L+ +    Y N  E     +  A+ +    + +G 
Sbjct: 60  GDVRDKERLTRALRGVDYVVHAAA-LKQVPAAEY-NPFECIRTNINGAQNVIDAAIDNG- 116

Query: 122 VKRLIYTASVLCASPL 137
           VKR++  ++   A+P+
Sbjct: 117 VKRVVALSTDKAANPI 132

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	341
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.97
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.96
PRK12320	699	hypothetical protein; Provisional	99.96
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.96
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
PLN02503	605	fatty acyl-CoA reductase 2	99.95
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.95
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.94
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.94
PRK06482	276	short chain dehydrogenase; Provisional	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.92
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.92
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.92
PRK08263	275	short chain dehydrogenase; Provisional	99.91
PRK07806	248	short chain dehydrogenase; Provisional	99.91
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.91
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.91
PRK09135	249	pteridine reductase; Provisional	99.91
PRK07775	274	short chain dehydrogenase; Provisional	99.9
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.9
PRK06914	280	short chain dehydrogenase; Provisional	99.9
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
PRK06180	277	short chain dehydrogenase; Provisional	99.9
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.89
PRK05876	275	short chain dehydrogenase; Provisional	99.89
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07074	257	short chain dehydrogenase; Provisional	99.89
PRK05875	276	short chain dehydrogenase; Provisional	99.89
PRK12746	254	short chain dehydrogenase; Provisional	99.89
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK07067	257	sorbitol dehydrogenase; Provisional	99.89
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.89
PRK12829	264	short chain dehydrogenase; Provisional	99.89
KOG2774	366	consensus NAD dependent epimerase [General functio	99.88
PRK12827	249	short chain dehydrogenase; Provisional	99.88
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.88
PRK06138	252	short chain dehydrogenase; Provisional	99.88
PRK07774	250	short chain dehydrogenase; Provisional	99.88
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.88
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.87
PRK08628	258	short chain dehydrogenase; Provisional	99.87
PRK06194	287	hypothetical protein; Provisional	99.87
PRK06128	300	oxidoreductase; Provisional	99.87
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06182	273	short chain dehydrogenase; Validated	99.87
PRK06179	270	short chain dehydrogenase; Provisional	99.87
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.87
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.87
PRK09134	258	short chain dehydrogenase; Provisional	99.87
PRK12828	239	short chain dehydrogenase; Provisional	99.87
PRK07060	245	short chain dehydrogenase; Provisional	99.87
PRK12939	250	short chain dehydrogenase; Provisional	99.87
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK08219	227	short chain dehydrogenase; Provisional	99.86
PRK06701	290	short chain dehydrogenase; Provisional	99.86
PRK06500	249	short chain dehydrogenase; Provisional	99.86
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.85
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK07890	258	short chain dehydrogenase; Provisional	99.85
PRK06123	248	short chain dehydrogenase; Provisional	99.85
PRK05993	277	short chain dehydrogenase; Provisional	99.85
PRK07985	294	oxidoreductase; Provisional	99.85
PRK07454	241	short chain dehydrogenase; Provisional	99.85
PRK05717	255	oxidoreductase; Validated	99.85
PRK07024	257	short chain dehydrogenase; Provisional	99.85
PRK08264	238	short chain dehydrogenase; Validated	99.85
PRK06841	255	short chain dehydrogenase; Provisional	99.85
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.85
PRK06181	263	short chain dehydrogenase; Provisional	99.85
PRK10538	248	malonic semialdehyde reductase; Provisional	99.85
PLN02253	280	xanthoxin dehydrogenase	99.85
PRK05650	270	short chain dehydrogenase; Provisional	99.84
PRK12937	245	short chain dehydrogenase; Provisional	99.84
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.84
PRK08324	681	short chain dehydrogenase; Validated	99.84
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.84
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.84
PRK09186	256	flagellin modification protein A; Provisional	99.84
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.84
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.84
PRK07814	263	short chain dehydrogenase; Provisional	99.84
PRK06398	258	aldose dehydrogenase; Validated	99.84
PRK08017	256	oxidoreductase; Provisional	99.84
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.84
PRK09291	257	short chain dehydrogenase; Provisional	99.84
PRK08267	260	short chain dehydrogenase; Provisional	99.84
PRK07326	237	short chain dehydrogenase; Provisional	99.83
PRK06114	254	short chain dehydrogenase; Provisional	99.83
PRK12743	256	oxidoreductase; Provisional	99.83
PRK08589	272	short chain dehydrogenase; Validated	99.83
PRK12747	252	short chain dehydrogenase; Provisional	99.83
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.83
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.83
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.83
PRK07478	254	short chain dehydrogenase; Provisional	99.83
PRK08265	261	short chain dehydrogenase; Provisional	99.83
PRK07063	260	short chain dehydrogenase; Provisional	99.83
PRK07856	252	short chain dehydrogenase; Provisional	99.83
PRK06523	260	short chain dehydrogenase; Provisional	99.83
PRK08251	248	short chain dehydrogenase; Provisional	99.83
PRK08643	256	acetoin reductase; Validated	99.83
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK06101	240	short chain dehydrogenase; Provisional	99.82
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.82
PRK07041	230	short chain dehydrogenase; Provisional	99.82
PRK09242	257	tropinone reductase; Provisional	99.82
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.82
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.82
PRK07035	252	short chain dehydrogenase; Provisional	99.82
PRK12742	237	oxidoreductase; Provisional	99.82
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.82
PRK07825	273	short chain dehydrogenase; Provisional	99.82
PRK07577	234	short chain dehydrogenase; Provisional	99.82
PRK05693	274	short chain dehydrogenase; Provisional	99.81
PRK05867	253	short chain dehydrogenase; Provisional	99.81
PRK07576	264	short chain dehydrogenase; Provisional	99.81
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK06198	260	short chain dehydrogenase; Provisional	99.81
PRK07109	334	short chain dehydrogenase; Provisional	99.81
PRK07102	243	short chain dehydrogenase; Provisional	99.81
PRK06172	253	short chain dehydrogenase; Provisional	99.81
PRK08226	263	short chain dehydrogenase; Provisional	99.81
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK06949	258	short chain dehydrogenase; Provisional	99.81
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.81
PRK06057	255	short chain dehydrogenase; Provisional	99.81
PRK06196	315	oxidoreductase; Provisional	99.81
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.81
PRK12744	257	short chain dehydrogenase; Provisional	99.81
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.8
PRK07904	253	short chain dehydrogenase; Provisional	99.8
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.8
PRK07069	251	short chain dehydrogenase; Validated	99.8
PRK06139	330	short chain dehydrogenase; Provisional	99.8
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.79
PRK06197	306	short chain dehydrogenase; Provisional	99.79
PRK05866	293	short chain dehydrogenase; Provisional	99.79
PRK05872	296	short chain dehydrogenase; Provisional	99.79
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.79
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.79
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.79
PRK08703	239	short chain dehydrogenase; Provisional	99.79
PRK09072	263	short chain dehydrogenase; Provisional	99.79
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.78
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.78
PRK07677	252	short chain dehydrogenase; Provisional	99.78
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.78
PRK06483	236	dihydromonapterin reductase; Provisional	99.78
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.78
PRK08278	273	short chain dehydrogenase; Provisional	99.78
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.77
COG2910	211	Putative NADH-flavin reductase [General function p	99.77
PRK06924	251	short chain dehydrogenase; Provisional	99.77
PRK07791	286	short chain dehydrogenase; Provisional	99.77
PRK07023	243	short chain dehydrogenase; Provisional	99.76
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.76
PRK05854	313	short chain dehydrogenase; Provisional	99.76
PRK07832	272	short chain dehydrogenase; Provisional	99.76
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.76
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.75
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.75
PRK06953	222	short chain dehydrogenase; Provisional	99.75
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK07578	199	short chain dehydrogenase; Provisional	99.75
PRK06484	520	short chain dehydrogenase; Validated	99.75
PRK07831	262	short chain dehydrogenase; Provisional	99.74
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.74
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.74
PRK05855	582	short chain dehydrogenase; Validated	99.73
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.73
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.73
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.73
PRK08339	263	short chain dehydrogenase; Provisional	99.73
PRK07062	265	short chain dehydrogenase; Provisional	99.73
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.72
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.72
PRK07201	657	short chain dehydrogenase; Provisional	99.72
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.71
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK06125	259	short chain dehydrogenase; Provisional	99.71
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK06940	275	short chain dehydrogenase; Provisional	99.71
PRK08177	225	short chain dehydrogenase; Provisional	99.71
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.71
PRK12367	245	short chain dehydrogenase; Provisional	99.71
PRK05884	223	short chain dehydrogenase; Provisional	99.7
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.7
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.7
PLN02780	320	ketoreductase/ oxidoreductase	99.7
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.68
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.68
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.68
PRK05599	246	hypothetical protein; Provisional	99.66
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.66
PRK06484	520	short chain dehydrogenase; Validated	99.65
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.65
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.64
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.63
PRK08303	305	short chain dehydrogenase; Provisional	99.62
PLN00015	308	protochlorophyllide reductase	99.59
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.59
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.57
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.57
PRK08862	227	short chain dehydrogenase; Provisional	99.56
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.54
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.54
KOG0725	270	consensus Reductases with broad range of substrate	99.52
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.51
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.49
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.49
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.48
KOG1208	314	consensus Dehydrogenases with different specificit	99.47
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.44
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.44
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.44
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.43
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.42
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.42
COG1028	251	FabG Dehydrogenases with different specificities (	99.42
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.39
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.33
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.19
PTZ00325	321	malate dehydrogenase; Provisional	99.16
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.15
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.13
PRK08309	177	short chain dehydrogenase; Provisional	99.06
PLN00106	323	malate dehydrogenase	99.01
PRK06720	169	hypothetical protein; Provisional	99.0
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.95
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.91
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.74
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.7
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.69
PRK09620	229	hypothetical protein; Provisional	98.68
PRK05086	312	malate dehydrogenase; Provisional	98.63
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.56
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.55
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.54
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.54
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.48
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.45
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.41
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.31
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.24
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.2
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.16
PRK14982	340	acyl-ACP reductase; Provisional	98.15
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.04
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.01
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.01
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.0
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.99
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.98
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.96
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	97.95
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.93
COG3268	382	Uncharacterized conserved protein [Function unknow	97.92
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.92
PRK05442	326	malate dehydrogenase; Provisional	97.86
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.86
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.84
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.82
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.79
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.72
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.72
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.71
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.66
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.65
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.64
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.63
PLN02602	350	lactate dehydrogenase	97.63
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.62
PRK04148	134	hypothetical protein; Provisional	97.61
PTZ00117	319	malate dehydrogenase; Provisional	97.6
PRK09496	453	trkA potassium transporter peripheral membrane com	97.59
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.55
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.55
PRK06223	307	malate dehydrogenase; Reviewed	97.53
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.51
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.5
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.49
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.46
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.45
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.43
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.41
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.39
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	97.39
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.38
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.34
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.33
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.3
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.3
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.29
PRK09496	453	trkA potassium transporter peripheral membrane com	97.25
PLN02383	344	aspartate semialdehyde dehydrogenase	97.24
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.24
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.18
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.18
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.16
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.15
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.12
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.12
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	97.1
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.1
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.08
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.05
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.03
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.98
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.97
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.97
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.96
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	96.93
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.93
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.92
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.92
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	96.91
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.87
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.86
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.84
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.83
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.8
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	96.79
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.79
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.75
PRK08655	437	prephenate dehydrogenase; Provisional	96.74
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.72
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.72
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.7
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.68
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.68
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.67
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.67
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.67
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.67
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.65
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.64
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.64
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	96.63
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	96.62
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	96.62
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.61
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.59
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.59
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.58
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.54
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.53
PRK06849	389	hypothetical protein; Provisional	96.53
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.53
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.52
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.5
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.49
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.49
PRK08223	287	hypothetical protein; Validated	96.46
PRK10669	558	putative cation:proton antiport protein; Provision	96.46
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.45
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.41
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.4
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.37
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.34
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.33
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.3
PRK08328	231	hypothetical protein; Provisional	96.29
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.28
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.28
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.25
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.23
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.21
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.21
PRK07417	279	arogenate dehydrogenase; Reviewed	96.21
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	96.19
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.18
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.16
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.13
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.13
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.09
PRK07877	722	hypothetical protein; Provisional	96.08
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.08
PRK08818	370	prephenate dehydrogenase; Provisional	96.07
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.07
TIGR03693	637	ocin_ThiF_like putative thiazole-containing bacter	96.06
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.06
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.03
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.03
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.02
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.02
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.01
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	95.99
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.99
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	95.98
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	95.98
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.98
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.98
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.95
TIGR01161	352	purK phosphoribosylaminoimidazole carboxylase, Pur	95.94
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.89
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	95.89
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.88
PLN02948	577	phosphoribosylaminoimidazole carboxylase	95.88
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.86
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	95.86
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.85
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.85
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	95.85
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	95.84
KOG1496	332	consensus Malate dehydrogenase [Energy production	95.84
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.83
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	95.82
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.82
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	95.81
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	95.79
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.79
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.78
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	95.78
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.78
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.77
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.75
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.74
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.72
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	95.7
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.7
PLN00203	519	glutamyl-tRNA reductase	95.67
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.67
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.66
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.65
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.65
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.64
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.61
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.61
PRK02705	459	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.6

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=2.5e-50  Score=346.86  Aligned_cols=322  Identities=33%  Similarity=0.537  Sum_probs=275.2

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |.+..+|+|+||||+||||++|++.|+++||.|++++| ++++.++.+.+..+++..+..+.+.+|+.+++++.+++++|
T Consensus         1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR-~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc   79 (327)
T KOG1502|consen    1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVR-DPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC   79 (327)
T ss_pred             CCCCCCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEc-CcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC
Confidence            67667899999999999999999999999999999999 99988888899999888778999999999999999999999


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      |.|||+|.+..+...++..+.+++.+.|++|++++|++.++++||||+||.+++.......  .....++|+.|.+.++.
T Consensus        80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~--~~~~vvdE~~wsd~~~~  157 (327)
T KOG1502|consen   80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNI--GENSVVDEESWSDLDFC  157 (327)
T ss_pred             CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCC--CCCcccccccCCcHHHH
Confidence            9999999999987755555899999999999999999999999999999998877541211  11568999999888665


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhcc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEIL  239 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (341)
                      .    .....|..||..+|+..++++ +.+++.+++-|+.|+||.....  .+.....++..+.+....+.+.       
T Consensus       158 ~----~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~--l~~s~~~~l~~i~G~~~~~~n~-------  224 (327)
T KOG1502|consen  158 R----CKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPS--LNSSLNALLKLIKGLAETYPNF-------  224 (327)
T ss_pred             H----hhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccc--cchhHHHHHHHHhcccccCCCC-------
Confidence            1    223789999999999999999 7799999999999999988774  5554555566666555555544       


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcCCC---CcceEeecchhhhhcC-
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV---PKREIKWGGTKLEEKG-  315 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~---~~~~~~~d~~k~~~lg-  315 (341)
                       ...||||+|+|.|++.+++++.+.|+|.|.++..++.|+++.+.+.+|..++|......   ......++++|+++|| 
T Consensus       225 -~~~~VdVrDVA~AHv~a~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~  303 (327)
T KOG1502|consen  225 -WLAFVDVRDVALAHVLALEKPSAKGRYICVGEVVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLGG  303 (327)
T ss_pred             -ceeeEeHHHHHHHHHHHHcCcccCceEEEecCcccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHhccc
Confidence             44599999999999999999999999999999988999999999999988877765433   2223468999999977 


Q ss_pred             CcccccHHHHHHHHHHHHHHcCCCC
Q 019415          316 FEYNYDLKMILDDSIKCGRKSGYLP  340 (341)
Q Consensus       316 ~~~~~~~~~~l~~~~~~~~~~~~~~  340 (341)
                      |++. +++|++.++++++++.|.++
T Consensus       304 ~~~~-~l~e~~~dt~~sl~~~~~l~  327 (327)
T KOG1502|consen  304 FKFR-PLEETLSDTVESLREKGLLL  327 (327)
T ss_pred             ceec-ChHHHHHHHHHHHHHhcCCC
Confidence            7776 99999999999999998874

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2e-49  Score=331.94  Aligned_cols=301  Identities=21%  Similarity=0.249  Sum_probs=254.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      |+||||||+||||+|.+.+|++.||+|++++.  .++ ...+.+...     ..+++++|+.|.+.+.+.|+  ++|.||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DN--L~~-g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~~idaVi   72 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDN--LSN-GHKIALLKL-----QFKFYEGDLLDRALLTAVFEENKIDAVV   72 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEec--CCC-CCHHHhhhc-----cCceEEeccccHHHHHHHHHhcCCCEEE
Confidence            68999999999999999999999999999755  433 222222221     16899999999999999997  699999


Q ss_pred             EeccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           85 HVATPLQHID--GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        85 ~~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |+||.....+  ..|. +.++.|+.+|.+|+++|++.+ +++|||-||++ +||.+.      ..|++|+.+.       
T Consensus        73 HFAa~~~VgESv~~Pl-~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAa-vYG~p~------~~PI~E~~~~-------  136 (329)
T COG1087          73 HFAASISVGESVQNPL-KYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAA-VYGEPT------TSPISETSPL-------  136 (329)
T ss_pred             ECccccccchhhhCHH-HHHhhchHhHHHHHHHHHHhC-CCEEEEecchh-hcCCCC------CcccCCCCCC-------
Confidence            9999888776  5555 899999999999999999999 99999999998 776665      6799999833       


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCC-----CCCCchhhhhHhhHhcCc---ccccccc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPY-----SSTPVSVIGGLCQLTNNE---YVYQTLR  233 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~  233 (341)
                         .|.++||.||.+.|++++.+. .+++++++||.+++.|....+.     .....+++.+++.+.+++   .++++.-
T Consensus       137 ---~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY  213 (329)
T COG1087         137 ---APINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDY  213 (329)
T ss_pred             ---CCCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCC
Confidence               458999999999999999998 5689999999999999865533     112346888888877766   6788888


Q ss_pred             chhhccCCCCcccHHHHHHHHHHhhcCCCCC---ceEEEecc-ccCHHHHHHHHHHhCCCCccccCcC---CCCcceEee
Q 019415          234 DTEEILGKLPLVHIDDVCEAHIFCMEKPSMS---GRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYL---DVPKREIKW  306 (341)
Q Consensus       234 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~---g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~  306 (341)
                      .+.||+..||||||.|+|.+++.+++.-..+   .+||++++ ..|+.|+++.+++..+ .++|....   ++++..+..
T Consensus       214 ~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg-~~ip~~~~~RR~GDpa~l~A  292 (329)
T COG1087         214 DTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTG-RDIPVEIAPRRAGDPAILVA  292 (329)
T ss_pred             CCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhC-CcCceeeCCCCCCCCceeEe
Confidence            9999999999999999999999998763323   38999986 4999999999999994 66766543   679999999


Q ss_pred             cchhhhh-cCCcccc-cHHHHHHHHHHHHHH
Q 019415          307 GGTKLEE-KGFEYNY-DLKMILDDSIKCGRK  335 (341)
Q Consensus       307 d~~k~~~-lg~~~~~-~~~~~l~~~~~~~~~  335 (341)
                      |++|+++ |||+|++ ++++.++....|..+
T Consensus       293 d~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~  323 (329)
T COG1087         293 DSSKARQILGWQPTYDDLEDIIKDAWDWHQQ  323 (329)
T ss_pred             CHHHHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence            9999988 9999999 699999999999983

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1e-46  Score=340.98  Aligned_cols=311  Identities=29%  Similarity=0.467  Sum_probs=239.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +..... ...+..+......++++.+|+++++.+.++++++|+||
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r-~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi   86 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVR-NPDDPK-NTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF   86 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC-Cchhhh-HHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence            5689999999999999999999999999999999 754311 11122222112368899999999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      |+|+....    ..+..+++|+.++.+++++|++.+ +++|||+||..++|+.....   ...+++|+++.+.+..    
T Consensus        87 h~A~~~~~----~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~---~~~~~~E~~~~~~~~~----  154 (342)
T PLN02214         87 HTASPVTD----DPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRD---PEAVVDESCWSDLDFC----  154 (342)
T ss_pred             EecCCCCC----CHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCC---CCcccCcccCCChhhc----
Confidence            99997532    245889999999999999999998 89999999986577532211   0235788875433211    


Q ss_pred             cchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          165 NEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                      ..+.+.|+.||..+|++++.+. +.|++++++||++||||+....  .......++..+.+....+  +.      +.++
T Consensus       155 ~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~--~~~~~~~~~~~~~g~~~~~--~~------~~~~  224 (342)
T PLN02214        155 KNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPT--INASLYHVLKYLTGSAKTY--AN------LTQA  224 (342)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC--CCchHHHHHHHHcCCcccC--CC------CCcC
Confidence            2346789999999999999987 6799999999999999976543  2222333344333332222  12      2789


Q ss_pred             cccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcC---CCCcceEeecchhhhhcCCcccc
Q 019415          244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYL---DVPKREIKWGGTKLEEKGFEYNY  320 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~~~lg~~~~~  320 (341)
                      ||||+|+|++++.+++++...|.||++++.+++.|+++.+++.+|...++....   +.......+|++|+++|||+|+ 
T Consensus       225 ~i~V~Dva~a~~~al~~~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LG~~p~-  303 (342)
T PLN02214        225 YVDVRDVALAHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGLEFT-  303 (342)
T ss_pred             eeEHHHHHHHHHHHHhCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHHHcCCccc-
Confidence            999999999999999887667799998878999999999999997655554332   2234455789999988999996 


Q ss_pred             cHHHHHHHHHHHHHHcCCCC
Q 019415          321 DLKMILDDSIKCGRKSGYLP  340 (341)
Q Consensus       321 ~~~~~l~~~~~~~~~~~~~~  340 (341)
                      +++++|+++++|+++.|+||
T Consensus       304 ~lee~i~~~~~~~~~~~~~~  323 (342)
T PLN02214        304 STKQSLYDTVKSLQEKGHLA  323 (342)
T ss_pred             CHHHHHHHHHHHHHHcCCCC
Confidence            99999999999999999987

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=4.9e-46  Score=337.68  Aligned_cols=307  Identities=17%  Similarity=0.133  Sum_probs=231.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh-hhhHhh-hCCC-CCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS-KVDLLK-SLPG-AETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|+|||||||||||++|++.|+++|++|++++| ...... ....+. .... ....+.++.+|++|.+.+.++++++|
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDN-FSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC-CCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            4589999999999999999999999999999988 543211 111111 1111 11368899999999999999999999


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      +|||+|+...... .......+++|+.++.+++++|++.+ +++|||+||.+ +|+...      ..+..|++..     
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~-vyg~~~------~~~~~e~~~~-----  159 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSS-TYGDHP------DLPKIEERIG-----  159 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechH-hhCCCC------CCCCCCCCCC-----
Confidence            9999999765432 22234779999999999999999998 99999999998 554333      3455565422     


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhh
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEE  237 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  237 (341)
                           .|.++|+.+|.++|.+++.+. +++++++++||+++|||+.........+++.++..+..+.  ..++++.+   
T Consensus       160 -----~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~---  231 (348)
T PRK15181        160 -----RPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGST---  231 (348)
T ss_pred             -----CCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCc---
Confidence                 345789999999999999887 6699999999999999986543222335666666555444  23344444   


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcCCC---CCceEEEecc-ccCHHHHHHHHHHhCCCCcc-----cc---CcCCCCcceEe
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEKPS---MSGRFFCTNV-FVSSAEIASCLQQNYPEFHI-----KQ---EYLDVPKREIK  305 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~-----~~---~~~~~~~~~~~  305 (341)
                         .++|+|++|+|++++.++....   ..++||++++ .+|++|+++.+.+.++....     ..   ...+.......
T Consensus       232 ---~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (348)
T PRK15181        232 ---SRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQ  308 (348)
T ss_pred             ---eEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccc
Confidence               8999999999999998775432   3459999885 59999999999988752211     01   11123444678


Q ss_pred             ecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          306 WGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       306 ~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +|++|+++ |||+|+++++++|+++++|++..
T Consensus       309 ~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~  340 (348)
T PRK15181        309 ADITKIKTFLSYEPEFDIKEGLKQTLKWYIDK  340 (348)
T ss_pred             cCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            99999987 99999999999999999999764

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.2e-46  Score=311.02  Aligned_cols=305  Identities=16%  Similarity=0.113  Sum_probs=248.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      |++|||||.||||+++++.+++..  .+|++++.  +.-....+.+..+.. .+...|+++|+.|.+.+..+++  ++|+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk--LTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~~~D~   77 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK--LTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEYQPDA   77 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec--ccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhcCCCe
Confidence            689999999999999999999985  34666544  322233344443322 3589999999999999999998  6999


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |+|+||-..... -..+..+++.|+.||.+||+++++....-||+|+||.. +||.-...    ...++|+++-      
T Consensus        78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDE-VYG~l~~~----~~~FtE~tp~------  146 (340)
T COG1088          78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDE-VYGDLGLD----DDAFTETTPY------  146 (340)
T ss_pred             EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccc-ccccccCC----CCCcccCCCC------
Confidence            999999887765 44456999999999999999999998224999999999 56554433    3478898833      


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEI  238 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  238 (341)
                          .|.++|+.||+.++.+++.|. .+|+++++.|+++-|||...+.    ++++.++..+..+.  ++++++.+    
T Consensus       147 ----~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE----KlIP~~I~nal~g~~lpvYGdG~~----  214 (340)
T COG1088         147 ----NPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE----KLIPLMIINALLGKPLPVYGDGLQ----  214 (340)
T ss_pred             ----CCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch----hhhHHHHHHHHcCCCCceecCCcc----
Confidence                457999999999999999999 7899999999999999988766    57777776655544  77888777    


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccc----cCc---CCCCcceEeecchh
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIK----QEY---LDVPKREIKWGGTK  310 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~----~~~---~~~~~~~~~~d~~k  310 (341)
                        .|||+||+|-|+|+..++.+...+.+||++++ ..+--|+++.|.+.++.....    +.+   .++--.++.+|.+|
T Consensus       215 --iRDWl~VeDh~~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~K  292 (340)
T COG1088         215 --IRDWLYVEDHCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASK  292 (340)
T ss_pred             --eeeeEEeHhHHHHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHH
Confidence              99999999999999999999888669999985 589999999999999543332    222   25677788999999


Q ss_pred             hhh-cCCcccccHHHHHHHHHHHHHHcCCC
Q 019415          311 LEE-KGFEYNYDLKMILDDSIKCGRKSGYL  339 (341)
Q Consensus       311 ~~~-lg~~~~~~~~~~l~~~~~~~~~~~~~  339 (341)
                      +++ |||+|..+++++|+++++|+..+.+|
T Consensus       293 i~~eLgW~P~~~fe~GlrkTv~WY~~N~~W  322 (340)
T COG1088         293 IKRELGWRPQETFETGLRKTVDWYLDNEWW  322 (340)
T ss_pred             HhhhcCCCcCCCHHHHHHHHHHHHHhchHH
Confidence            865 99999999999999999999987543

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=2.4e-45  Score=334.04  Aligned_cols=322  Identities=32%  Similarity=0.595  Sum_probs=235.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |.+ ++++||||||+||||++|++.|++.|++|++++| +.........+...+.....++++.+|+++++.+.++++++
T Consensus         1 ~~~-~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~   78 (351)
T PLN02650          1 MGS-QKETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGC   78 (351)
T ss_pred             CCC-CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEc-CcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCC
Confidence            443 3579999999999999999999999999999999 76543333222222222236889999999999999999999


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      |+|||+|+.......++....+++|+.++.+++++|.+.+.+++|||+||.+++++... .    ...++|+.+.+.+..
T Consensus        79 d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~-~----~~~~~E~~~~~~~~~  153 (351)
T PLN02650         79 TGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEH-Q----KPVYDEDCWSDLDFC  153 (351)
T ss_pred             CEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCC-C----CCccCcccCCchhhh
Confidence            99999999765333333457899999999999999998764789999999976664322 1    122566654322111


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCc-hhhhhHhhHhcCccccccccchhhc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPV-SVIGGLCQLTNNEYVYQTLRDTEEI  238 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  238 (341)
                      .+ ...+.++|+.||..+|.+++.|+ ++|++++++||+++|||+....  .+. ++..+ ....+....+...      
T Consensus       154 ~~-~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~--~~~~~~~~~-~~~~~~~~~~~~~------  223 (351)
T PLN02650        154 RR-KKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS--MPPSLITAL-SLITGNEAHYSII------  223 (351)
T ss_pred             hc-cccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC--CCccHHHHH-HHhcCCccccCcC------
Confidence            00 11234689999999999999998 6799999999999999976543  211 22111 1111221212111      


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcC--CCCcceEeecchhhhhcCC
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYL--DVPKREIKWGGTKLEEKGF  316 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~  316 (341)
                       +.++|+|++|+|++++.+++++...+.|++++..+|+.|+++++.+.++...++....  +........|++|+++|||
T Consensus       224 -~~r~~v~V~Dva~a~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~  302 (351)
T PLN02650        224 -KQGQFVHLDDLCNAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPARFPGIDEDLKSVEFSSKKLTDLGF  302 (351)
T ss_pred             -CCcceeeHHHHHHHHHHHhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCCCCCCCcCcccccccCChHHHHHhCC
Confidence             1689999999999999999876666788766677999999999999886544443321  2233455678999877999


Q ss_pred             cccccHHHHHHHHHHHHHHcCCCC
Q 019415          317 EYNYDLKMILDDSIKCGRKSGYLP  340 (341)
Q Consensus       317 ~~~~~~~~~l~~~~~~~~~~~~~~  340 (341)
                      +|+++++++|+++++|+++.+.+|
T Consensus       303 ~p~~~l~egl~~~i~~~~~~~~~~  326 (351)
T PLN02650        303 TFKYSLEDMFDGAIETCREKGLIP  326 (351)
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCC
Confidence            999999999999999999998876

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=1.1e-44  Score=328.10  Aligned_cols=326  Identities=30%  Similarity=0.522  Sum_probs=235.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+|+||||||+||||++|++.|++.|++|++++| +.........+..++. .+.++++.+|++|++.+.++++++|+||
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVR-DPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEEC-CCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            4689999999999999999999999999999999 6543222222222221 1368899999999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      |+|+.......++...++++|+.++.++++++.+.+.+++|||+||.++++......   ...+++|+.+....... ..
T Consensus        86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~---~~~~~~E~~~~~~~~~~-~~  161 (338)
T PLN00198         86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSG---TGLVMNEKNWTDVEFLT-SE  161 (338)
T ss_pred             EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCC---CCceeccccCCchhhhh-hc
Confidence            999975433334444678999999999999998864389999999998655322100   02345665432211000 01


Q ss_pred             cchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc-ccc-cccchhhccCC
Q 019415          165 NEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY-VYQ-TLRDTEEILGK  241 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~  241 (341)
                      ..|.++|+.||.++|.+++.|+ +++++++++||++||||+....  .+.++..+...+.+... ..+ .+.+.  ..+.
T Consensus       162 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~  237 (338)
T PLN00198        162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSD--IPSSLSLAMSLITGNEFLINGLKGMQM--LSGS  237 (338)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCC--CCCcHHHHHHHHcCCcccccccccccc--ccCC
Confidence            2356789999999999999988 5799999999999999986543  33333322222222221 112 11111  1225


Q ss_pred             CCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcCC-CCcceEeecchhhhhcCCcccc
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLD-VPKREIKWGGTKLEEKGFEYNY  320 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~~lg~~~~~  320 (341)
                      ++|+||+|+|++++.+++.....+.|++++..+|+.|+++.+.+.++...++..+.. .......+|++|++++||+|++
T Consensus       238 ~~~i~V~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~G~~p~~  317 (338)
T PLN00198        238 ISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPTDFGDFPSKAKLIISSEKLISEGFSFEY  317 (338)
T ss_pred             cceeEHHHHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCCccccccCCCCccccChHHHHhCCceecC
Confidence            899999999999999998765556887777779999999999999865444433221 1123456899999889999999


Q ss_pred             cHHHHHHHHHHHHHHcCCCC
Q 019415          321 DLKMILDDSIKCGRKSGYLP  340 (341)
Q Consensus       321 ~~~~~l~~~~~~~~~~~~~~  340 (341)
                      +++++|+++++|+++.+++.
T Consensus       318 ~l~~gi~~~~~~~~~~~~~~  337 (338)
T PLN00198        318 GIEEIYDQTVEYFKAKGLLK  337 (338)
T ss_pred             cHHHHHHHHHHHHHHcCCCC
Confidence            99999999999999999875

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.2e-44  Score=325.70  Aligned_cols=318  Identities=28%  Similarity=0.478  Sum_probs=237.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |+ ..+++||||||+||||++++++|+++|++|++++| +.........+.........++++.+|+++++.+.++++++
T Consensus         1 ~~-~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (322)
T PLN02986          1 MN-GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVR-DLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGC   78 (322)
T ss_pred             CC-CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCC
Confidence            44 24689999999999999999999999999999999 77653333333222222347899999999999999999999


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccc-cCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCA-SPLKEDGSAGYKDSIDETCYTPPDH  159 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~-~~~~~~~~~~~~~~~~E~~~~~~~~  159 (341)
                      |+|||+|+.......++....+++|+.++.+++++|++...+++|||+||.+++ ++.....   ...+++|+++..+..
T Consensus        79 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~---~~~~~~E~~~~~p~~  155 (322)
T PLN02986         79 DAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIE---ANDVVDETFFSDPSL  155 (322)
T ss_pred             CEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCC---CCCCcCcccCCChHH
Confidence            999999997644333344467899999999999999986338999999998754 3322100   034577776543311


Q ss_pred             CCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhc
Q 019415          160 PLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEI  238 (341)
Q Consensus       160 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (341)
                      .    ..+.+.|+.||..+|.+++.+. +++++++++||+++|||.....  .+. ...++..+..+...++  .     
T Consensus       156 ~----~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~--~~~-~~~~~~~~~~g~~~~~--~-----  221 (322)
T PLN02986        156 C----RETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPT--LNF-SVELIVDFINGKNLFN--N-----  221 (322)
T ss_pred             h----hccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCC--CCc-cHHHHHHHHcCCCCCC--C-----
Confidence            0    1235789999999999999998 6799999999999999975532  111 2223333333322221  2     


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcCCCCcce--EeecchhhhhcCC
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKRE--IKWGGTKLEEKGF  316 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~--~~~d~~k~~~lg~  316 (341)
                       +.++|||++|+|++++.+++++...++||++++.+|+.|+++++++.+|...++..........  ..+|++|+++|||
T Consensus       222 -~~~~~v~v~Dva~a~~~al~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lg~  300 (322)
T PLN02986        222 -RFYRFVDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNLGV  300 (322)
T ss_pred             -cCcceeEHHHHHHHHHHHhcCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCCCccccccccCCccCHHHHHHcCC
Confidence             2789999999999999999987766799997777999999999999998655444322222222  2489999988999


Q ss_pred             cccccHHHHHHHHHHHHHHcCCC
Q 019415          317 EYNYDLKMILDDSIKCGRKSGYL  339 (341)
Q Consensus       317 ~~~~~~~~~l~~~~~~~~~~~~~  339 (341)
                      +|+ +++|+|+++++|+++.|.+
T Consensus       301 ~~~-~l~e~~~~~~~~~~~~~~~  322 (322)
T PLN02986        301 EFT-PMKSSLRDTILSLKEKCLL  322 (322)
T ss_pred             ccc-CHHHHHHHHHHHHHHcCCC
Confidence            998 9999999999999998864

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.1e-44  Score=324.36  Aligned_cols=314  Identities=28%  Similarity=0.480  Sum_probs=235.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+||||||+||||++|+++|+++|++|++++| +.........+.......+.++++.+|+++++.+.++++++|+||
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVR-DPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEc-CCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            3589999999999999999999999999999999 765433333332222223478999999999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccc-cCCCC-CCCCCCCCCCCCCCCCCCCCCC
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCA-SPLKE-DGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~-~~~~~-~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |+|+.......++.+..+++|+.++.+++++|.+. + +++|||+||.+++ |+... ..    ..+++|+.+..+... 
T Consensus        82 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~----~~~~~E~~~~~p~~~-  155 (322)
T PLN02662         82 HTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTP----DVVVDETWFSDPAFC-  155 (322)
T ss_pred             EeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCC----CCcCCcccCCChhHh-
Confidence            99998654333333478899999999999999987 6 8999999998643 43221 11    345677653222100 


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccC
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG  240 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (341)
                         ....+.|+.+|..+|++++.+. +++++++++||+++|||.....  .. ....++..+..+....+  .      +
T Consensus       156 ---~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~--~~-~~~~~~~~~~~~~~~~~--~------~  221 (322)
T PLN02662        156 ---EESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPT--LN-TSAEAILNLINGAQTFP--N------A  221 (322)
T ss_pred             ---hcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCC--CC-chHHHHHHHhcCCccCC--C------C
Confidence               0113589999999999999987 6799999999999999975432  11 12223333333322211  2      2


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcCC--CCcceEeecchhhhhcCCcc
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLD--VPKREIKWGGTKLEEKGFEY  318 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~lg~~~  318 (341)
                      .++|||++|+|++++.+++.+...|.||+++..+|+.|+++++.+.++...++....+  .......+|++|+++|||++
T Consensus       222 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~  301 (322)
T PLN02662        222 SYRWVDVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKSLGIEF  301 (322)
T ss_pred             CcCeEEHHHHHHHHHHHhcCcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCCCCCCCccccccccccChHHHHHhCCcc
Confidence            8999999999999999998876667899987779999999999999875544443221  23455679999998899997


Q ss_pred             cccHHHHHHHHHHHHHHcCCCC
Q 019415          319 NYDLKMILDDSIKCGRKSGYLP  340 (341)
Q Consensus       319 ~~~~~~~l~~~~~~~~~~~~~~  340 (341)
                      . +++++|+++++|+++.|+|+
T Consensus       302 ~-~~~~~l~~~~~~~~~~~~~~  322 (322)
T PLN02662        302 I-PLEVSLKDTVESLKEKGFLS  322 (322)
T ss_pred             c-cHHHHHHHHHHHHHHcCCCC
Confidence            5 99999999999999999874

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=8.8e-44  Score=320.59  Aligned_cols=316  Identities=27%  Similarity=0.452  Sum_probs=234.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +.........+.........++++.+|+++++.+.++++++|+||
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVR-DPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc-CCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            4689999999999999999999999999999888 765422222222211222478899999999999999999999999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... .+++...+++|+.++.+++++|.+....++||++||..++++.....  ....+++|+++..+...   
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~--~~~~~~~E~~~~~p~~~---  157 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKL--GPNDVVDETFFTNPSFA---  157 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccC--CCCCccCcCCCCchhHh---
Confidence            9999754332 33456889999999999999998853378999999988666432100  00346778764433100   


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL  242 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (341)
                       ..+.+.|+.+|.++|.+++.+. +++++++++||+++|||+....  .+ +...++..+..+...+.  .+      .+
T Consensus       158 -~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~--~~-~~~~~i~~~~~~~~~~~--~~------~r  225 (325)
T PLN02989        158 -EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPT--LN-FSVAVIVELMKGKNPFN--TT------HH  225 (325)
T ss_pred             -cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCC--CC-chHHHHHHHHcCCCCCC--Cc------Cc
Confidence             1124689999999999999988 5699999999999999986543  11 23233333333332221  12      68


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcC---CCCcceEeecchhhhhcCCccc
Q 019415          243 PLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYL---DVPKREIKWGGTKLEEKGFEYN  319 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~~~lg~~~~  319 (341)
                      +|+|++|+|++++.+++.+...++||++++.+|+.|+++.+++.+|...++....   +........|++|+++|||.|.
T Consensus       226 ~~i~v~Dva~a~~~~l~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~  305 (325)
T PLN02989        226 RFVDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSLGIIEF  305 (325)
T ss_pred             CeeEHHHHHHHHHHHhcCcccCceEEEecCCCCHHHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHHcCCCCC
Confidence            9999999999999999876666799997778999999999999997543322110   1112356788999988999999


Q ss_pred             ccHHHHHHHHHHHHHHcCC
Q 019415          320 YDLKMILDDSIKCGRKSGY  338 (341)
Q Consensus       320 ~~~~~~l~~~~~~~~~~~~  338 (341)
                      ++++++|+++++|++..|.
T Consensus       306 ~~l~~gi~~~~~~~~~~~~  324 (325)
T PLN02989        306 TPTETSLRDTVLSLKEKCL  324 (325)
T ss_pred             CCHHHHHHHHHHHHHHhCC
Confidence            9999999999999998764

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.3e-43  Score=318.29  Aligned_cols=328  Identities=33%  Similarity=0.606  Sum_probs=231.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      +.|+||||||+||||++++++|+++|++|++++| +......  ....+.. ..+++++.+|+++.+.+.++++++|+||
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r-~~~~~~~--~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR-DPAKSLH--LLSKWKE-GDRLRLFRADLQEEGSFDEAVKGCDGVF   84 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-ChHHHHH--HHHhhcc-CCeEEEEECCCCCHHHHHHHHcCCCEEE
Confidence            4689999999999999999999999999999999 6543211  1111111 2468899999999999999999999999


Q ss_pred             EeccCCcccc---chhHh-----HhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCC
Q 019415           85 HVATPLQHID---GYLYK-----NVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTP  156 (341)
Q Consensus        85 ~~a~~~~~~~---~~~~~-----~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (341)
                      |+|+......   ....+     .+++.|+.++.+++++|++.+.+++|||+||.++++.....+  ....+++|+.+.+
T Consensus        85 h~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~--~~~~~~~E~~~~p  162 (353)
T PLN02896         85 HVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNG--RWRAVVDETCQTP  162 (353)
T ss_pred             ECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCC--CCCCccCcccCCc
Confidence            9999765331   11222     344556799999999998874378999999998554222110  0013566764333


Q ss_pred             CCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccch
Q 019415          157 PDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDT  235 (341)
Q Consensus       157 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (341)
                      .+...+ ...+.++|+.||.++|++++.++ +++++++++||++||||+....  .+.++..+...+.+.....+.....
T Consensus       163 ~~~~~~-~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~  239 (353)
T PLN02896        163 IDHVWN-TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS--VPSSIQVLLSPITGDSKLFSILSAV  239 (353)
T ss_pred             HHHhhc-cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC--CCchHHHHHHHhcCCcccccccccc
Confidence            210000 01234689999999999999998 6799999999999999976544  4555544444332222111110000


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcCCC--CcceEeecchhhhh
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV--PKREIKWGGTKLEE  313 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~--~~~~~~~d~~k~~~  313 (341)
                      ....+.++|||++|+|++++.+++.+...+.|++++..+|+.|+++++++.++...+.....+.  ......+|++++++
T Consensus       240 ~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (353)
T PLN02896        240 NSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSIPSEISSKKLRD  319 (353)
T ss_pred             ccccCceeEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCCCCccccccccccCccccccCHHHHHH
Confidence            0011246999999999999999987655668887777799999999999998643332222111  11123568888888


Q ss_pred             cCCcccccHHHHHHHHHHHHHHcCCCCC
Q 019415          314 KGFEYNYDLKMILDDSIKCGRKSGYLPQ  341 (341)
Q Consensus       314 lg~~~~~~~~~~l~~~~~~~~~~~~~~~  341 (341)
                      |||+|+++++++|+++++|++..+.+||
T Consensus       320 lGw~p~~~l~~~i~~~~~~~~~~~~~~~  347 (353)
T PLN02896        320 LGFEYKYGIEEIIDQTIDCCVDHGFLPQ  347 (353)
T ss_pred             cCCCccCCHHHHHHHHHHHHHHCCCCCc
Confidence            9999999999999999999999999886

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2e-42  Score=320.04  Aligned_cols=298  Identities=20%  Similarity=0.225  Sum_probs=224.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +.||||||||+||||++|++.|+++|++|++++| .... ......+.   . ...++++.+|+.+.     .+.++|+|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr-~~~~~~~~~~~~~---~-~~~~~~~~~Di~~~-----~~~~~D~V  188 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDN-FFTGRKENLVHLF---G-NPRFELIRHDVVEP-----ILLEVDQI  188 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC-CCCccHhHhhhhc---c-CCceEEEECccccc-----cccCCCEE
Confidence            4589999999999999999999999999999988 5322 11111111   1 23678899998764     24589999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+|+...... .......++.|+.++.+++++|++.+ + +|||+||.+ +|+...      ..+.+|+.+...+.   
T Consensus       189 iHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~-VYg~~~------~~p~~E~~~~~~~p---  256 (436)
T PLN02166        189 YHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSE-VYGDPL------EHPQKETYWGNVNP---  256 (436)
T ss_pred             EECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHH-HhCCCC------CCCCCccccccCCC---
Confidence            99999765432 22345889999999999999999988 4 899999998 554332      34677765432211   


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhcc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEIL  239 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  239 (341)
                        ..+.+.|+.+|..+|++++.+. +.+++++++||+++||++....  ...++..++..+..+.  ..++++.+     
T Consensus       257 --~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~--~~~~i~~~i~~~l~~~~i~v~g~g~~-----  327 (436)
T PLN02166        257 --IGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQTIRKQPMTVYGDGKQ-----  327 (436)
T ss_pred             --CCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCC--ccchHHHHHHHHhcCCCcEEeCCCCe-----
Confidence              1346789999999999999998 5699999999999999976432  2234556665555544  23444444     


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhhhh-c
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKLEE-K  314 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~-l  314 (341)
                       .++|+|++|+++++..+++.. ..|+||+++ +.+|+.|+++.+++.++. +....+   .........+|++|+++ |
T Consensus       328 -~rdfi~V~Dva~ai~~~~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~-~~~i~~~p~~~~~~~~~~~d~~Ka~~~L  404 (436)
T PLN02166        328 -TRSFQYVSDLVDGLVALMEGE-HVGPFNLGNPGEFTMLELAEVVKETIDS-SATIEFKPNTADDPHKRKPDISKAKELL  404 (436)
T ss_pred             -EEeeEEHHHHHHHHHHHHhcC-CCceEEeCCCCcEeHHHHHHHHHHHhCC-CCCeeeCCCCCCCccccccCHHHHHHHc
Confidence             899999999999999998753 457999987 459999999999999853 222211   12344566889999988 9


Q ss_pred             CCcccccHHHHHHHHHHHHHHc
Q 019415          315 GFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       315 g~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ||+|+++++++|+++++|++..
T Consensus       405 Gw~P~~sl~egl~~~i~~~~~~  426 (436)
T PLN02166        405 NWEPKISLREGLPLMVSDFRNR  426 (436)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=5e-42  Score=312.90  Aligned_cols=304  Identities=13%  Similarity=0.071  Sum_probs=226.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~V   83 (341)
                      +|+|||||||||||++|++.|+++|++|+++.+ +.........+.... ...++.++.+|++|.+.+.+++++  +|+|
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V   78 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVD-KLTYAGNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQPDCV   78 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEe-cCccccchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence            368999999999999999999999988665544 332211112222211 123688899999999999999984  8999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhc--------CCcCEEEEecccccccCCCCCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKS--------GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCY  154 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~  154 (341)
                      ||+||...... .+.++.++++|+.++.+++++|.+.        ..+++|||+||.+ +|+.....    ..+++|++.
T Consensus        79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~----~~~~~E~~~  153 (355)
T PRK10217         79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLHST----DDFFTETTP  153 (355)
T ss_pred             EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCCCC----CCCcCCCCC
Confidence            99999865432 3334689999999999999999863        1267999999998 45432211    346777752


Q ss_pred             CCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--ccccc
Q 019415          155 TPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQT  231 (341)
Q Consensus       155 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  231 (341)
                      .          .+.+.|+.||.++|.+++.++ +.+++++++||+++|||+....    .+++.++..+..+.  ..+++
T Consensus       154 ~----------~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~----~~~~~~~~~~~~~~~~~~~g~  219 (355)
T PRK10217        154 Y----------APSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE----KLIPLMILNALAGKPLPVYGN  219 (355)
T ss_pred             C----------CCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc----cHHHHHHHHHhcCCCceEeCC
Confidence            2          246889999999999999987 6799999999999999986432    34555555444433  33455


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCC----Ccccc-------C---c
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPE----FHIKQ-------E---Y  296 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~----~~~~~-------~---~  296 (341)
                      +.+      .++|+|++|+|+++..+++.....++||++++ .+|+.|+++.+++.++.    .+++.       .   .
T Consensus       220 g~~------~~~~i~v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (355)
T PRK10217        220 GQQ------IRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVAD  293 (355)
T ss_pred             CCe------eeCcCcHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCC
Confidence            554      99999999999999999987555569999985 58999999999997742    11100       0   0


Q ss_pred             CCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          297 LDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       297 ~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .+.......+|++|+++ |||+|+++++++|+++++|++..
T Consensus       294 ~~~~~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~  334 (355)
T PRK10217        294 RPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN  334 (355)
T ss_pred             CCCCCcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhC
Confidence            12234456889999977 99999999999999999999876

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4.9e-43  Score=289.56  Aligned_cols=304  Identities=19%  Similarity=0.204  Sum_probs=234.9

Q ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            2 DHKSNFKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         2 ~~~~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      +-.+.+++|||||.||||++.+..+.+.  .+..+.++.  ..-+.-...++.. ...+..+++.+|+.+...+..++. 
T Consensus         2 ~~~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idk--L~~~s~~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~   78 (331)
T KOG0747|consen    2 ATYKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDK--LDYCSNLKNLEPV-RNSPNYKFVEGDIADADLVLYLFET   78 (331)
T ss_pred             CCCccceEEEecCcCcchhhhhhhcccCCCCCcEEEEee--cccccccchhhhh-ccCCCceEeeccccchHHHHhhhcc
Confidence            3344589999999999999999999997  244444322  1111113333332 123588999999999988888885 


Q ss_pred             -CCCEEEEeccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCC-CCCC
Q 019415           79 -GCDFVFHVATPLQHID--GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID-ETCY  154 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~-E~~~  154 (341)
                       .+|.|+|+|+......  .++. ++...|+.++..|+++++..|++++|||+||.. +||..+      ..... |.+.
T Consensus        79 ~~id~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTde-VYGds~------~~~~~~E~s~  150 (331)
T KOG0747|consen   79 EEIDTVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDE-VYGDSD------EDAVVGEASL  150 (331)
T ss_pred             CchhhhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhccCeeEEEEecccc-eecCcc------cccccccccc
Confidence             5899999999988766  3444 889999999999999999998899999999999 554443      23333 5552


Q ss_pred             CCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--ccccc
Q 019415          155 TPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQT  231 (341)
Q Consensus       155 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  231 (341)
                                ..|.++|+.+|+++|..+++|. +++++++++|.++||||++...    ..++.|+.....+.  ..-++
T Consensus       151 ----------~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~----klipkFi~l~~~~~~~~i~g~  216 (331)
T KOG0747|consen  151 ----------LNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE----KLIPKFIKLAMRGKEYPIHGD  216 (331)
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH----HHhHHHHHHHHhCCCcceecC
Confidence                      3568999999999999999999 8899999999999999988766    45666766444333  44455


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCC----CCccc-----cCcCCCCc
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYP----EFHIK-----QEYLDVPK  301 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~----~~~~~-----~~~~~~~~  301 (341)
                      +.+      .|+|+|++|+++++..++++.+.+.+||+++ .+++..|+++.+.+.+.    ..+.+     +...+...
T Consensus       217 g~~------~rs~l~veD~~ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd  290 (331)
T KOG0747|consen  217 GLQ------TRSYLYVEDVSEAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYND  290 (331)
T ss_pred             ccc------ceeeEeHHHHHHHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCccc
Confidence            554      9999999999999999999866566999998 56999999999888762    11111     11124466


Q ss_pred             ceEeecchhhhhcCCcccccHHHHHHHHHHHHHHc
Q 019415          302 REIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       302 ~~~~~d~~k~~~lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .++.+|.+|+++|||+|++||+++|+.+++||.+.
T Consensus       291 ~Ry~~~~eKik~LGw~~~~p~~eGLrktie~y~~~  325 (331)
T KOG0747|consen  291 LRYFLDDEKIKKLGWRPTTPWEEGLRKTIEWYTKN  325 (331)
T ss_pred             ccccccHHHHHhcCCcccCcHHHHHHHHHHHHHhh
Confidence            67899999999999999999999999999999764

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=4.5e-42  Score=316.25  Aligned_cols=313  Identities=18%  Similarity=0.170  Sum_probs=223.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCC--CCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLP--GAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      +.|+|||||||||||++|++.|+++ |++|++++| +...   ...+....  ....+++++.+|++|.+.+.++++++|
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r-~~~~---~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d   88 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDV-YNDK---IKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD   88 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEec-Cchh---hhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence            4689999999999999999999998 599999988 6432   22222111  123479999999999999999999999


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC-
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDH-  159 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~-  159 (341)
                      +|||+|+...... .......+..|+.++.+++++|++.+  ++|||+||.. +|+...      ..+++|+.+...+. 
T Consensus        89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~-vYg~~~------~~~~~e~~p~~~~~~  159 (386)
T PLN02427         89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCE-VYGKTI------GSFLPKDHPLRQDPA  159 (386)
T ss_pred             EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeee-eeCCCc------CCCCCcccccccccc
Confidence            9999999765432 12223567789999999999998876  7999999998 554322      11222222110000 


Q ss_pred             -------CCcc----CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCC-------CCCCchhhhhHh
Q 019415          160 -------PLTC----HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPY-------SSTPVSVIGGLC  220 (341)
Q Consensus       160 -------~~~~----~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~-------~~~~~~~~~~~~  220 (341)
                             ..++    ...+.+.|+.+|.++|++++.++ +.+++++++||++||||+....       ...+..+..+..
T Consensus       160 ~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~  239 (386)
T PLN02427        160 FYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN  239 (386)
T ss_pred             cccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHH
Confidence                   0000    01235689999999999999887 5699999999999999975321       012334444555


Q ss_pred             hHhcCc--cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-CC-ceEEEecc--ccCHHHHHHHHHHhCCCCcc-c
Q 019415          221 QLTNNE--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MS-GRFFCTNV--FVSSAEIASCLQQNYPEFHI-K  293 (341)
Q Consensus       221 ~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~-g~~n~~~~--~~s~~e~~~~i~~~~~~~~~-~  293 (341)
                      .+..+.  ..++.+.+      .++||||+|+|++++.+++++. .. ++||++++  .+|+.|+++.+.+.++.... +
T Consensus       240 ~~~~~~~~~~~g~g~~------~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~  313 (386)
T PLN02427        240 NLLRREPLKLVDGGQS------QRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEP  313 (386)
T ss_pred             HHhcCCCeEEECCCCc------eECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccc
Confidence            544444  22333333      8999999999999999998753 33 49999974  69999999999998863211 1


Q ss_pred             c------CcC--------CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          294 Q------EYL--------DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       294 ~------~~~--------~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .      ...        .........|.+|+++ |||+|+++++++|+++++|+++.
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~  371 (386)
T PLN02427        314 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKT  371 (386)
T ss_pred             cccccccccCcccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence            0      000        0233556779999988 99999999999999999998764

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=9.1e-42  Score=316.20  Aligned_cols=300  Identities=20%  Similarity=0.210  Sum_probs=223.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      +.|||||||||||||++|++.|+++|++|++++| ......  +...... ...+++++.+|+.++     .+.++|+||
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~-~~~~~~--~~~~~~~-~~~~~~~i~~D~~~~-----~l~~~D~Vi  188 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDN-FFTGRK--ENVMHHF-SNPNFELIRHDVVEP-----ILLEVDQIY  188 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeC-CCccch--hhhhhhc-cCCceEEEECCccCh-----hhcCCCEEE
Confidence            4589999999999999999999999999999987 543211  1111110 123688899998775     345799999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... .......++.|+.++.+++++|++.+ + +|||+||.. +|+...      ..+.+|+.+...+.    
T Consensus       189 HlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~-VYg~~~------~~p~~E~~~~~~~P----  255 (442)
T PLN02206        189 HLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSE-VYGDPL------QHPQVETYWGNVNP----  255 (442)
T ss_pred             EeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChH-HhCCCC------CCCCCccccccCCC----
Confidence            9999765433 22345889999999999999999998 5 899999998 454332      34667765332211    


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhccC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEILG  240 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  240 (341)
                       ..+.+.|+.+|.++|+++..+. +.+++++++||+++||++....  ....+..++..+..+.  ..++++.+      
T Consensus       256 -~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~--~~~~v~~~i~~~l~~~~i~i~g~G~~------  326 (442)
T PLN02206        256 -IGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCID--DGRVVSNFVAQALRKEPLTVYGDGKQ------  326 (442)
T ss_pred             -CCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc--ccchHHHHHHHHHcCCCcEEeCCCCE------
Confidence             1235789999999999999987 5699999999999999975432  1234555655554443  33455555      


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCC-CccccC-cCCCCcceEeecchhhhh-cCC
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPE-FHIKQE-YLDVPKREIKWGGTKLEE-KGF  316 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~-~~~~~~-~~~~~~~~~~~d~~k~~~-lg~  316 (341)
                      .++|+|++|+|+++..+++.. ..|.||+++ +.+|+.|+++.+++.++. ..+... ..........+|++|+++ |||
T Consensus       327 ~rdfi~V~Dva~ai~~a~e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw  405 (442)
T PLN02206        327 TRSFQFVSDLVEGLMRLMEGE-HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGW  405 (442)
T ss_pred             EEeEEeHHHHHHHHHHHHhcC-CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCC
Confidence            899999999999999998754 457999987 569999999999998842 222111 112344567899999988 999


Q ss_pred             cccccHHHHHHHHHHHHHHc
Q 019415          317 EYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       317 ~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +|+++++++|+++++|++..
T Consensus       406 ~P~~~l~egl~~~~~~~~~~  425 (442)
T PLN02206        406 EPKVSLRQGLPLMVKDFRQR  425 (442)
T ss_pred             CCCCCHHHHHHHHHHHHHHh
Confidence            99999999999999999865

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=2.1e-41  Score=309.06  Aligned_cols=303  Identities=15%  Similarity=0.131  Sum_probs=223.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+|||||||||||++|++.|.++||+|++++| ....     .+..   .....+++.+|+++.+.+.++++++|+||
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r-~~~~-----~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vi   90 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDW-KKNE-----HMSE---DMFCHEFHLVDLRVMENCLKVTKGVDHVF   90 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEe-cccc-----cccc---ccccceEEECCCCCHHHHHHHHhCCCEEE
Confidence            4589999999999999999999999999999998 5421     0111   11135788999999999999899999999


Q ss_pred             EeccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           85 HVATPLQHID--GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        85 ~~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |+|+......  .......++.|+.++.+++++|++.+ +++|||+||.. +|+.....  ....++.|++..+.     
T Consensus        91 h~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~-vYg~~~~~--~~~~~~~E~~~~p~-----  161 (370)
T PLN02695         91 NLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSAC-IYPEFKQL--ETNVSLKESDAWPA-----  161 (370)
T ss_pred             EcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchh-hcCCcccc--CcCCCcCcccCCCC-----
Confidence            9998754211  11123567889999999999999998 99999999998 55432210  00124666542222     


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC-c--cccccccchhhc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN-E--YVYQTLRDTEEI  238 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~  238 (341)
                         .|.+.|+.+|..+|++++.+. +.+++++++||+++|||+.............+...+... .  ..++++.+    
T Consensus       162 ---~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~----  234 (370)
T PLN02695        162 ---EPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQ----  234 (370)
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCe----
Confidence               346899999999999999987 669999999999999997543210011234454444332 2  33344444    


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcC--CCCcceEeecchhhhh-c
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYL--DVPKREIKWGGTKLEE-K  314 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~-l  314 (341)
                        .++|+|++|+++++..+++.. ..++||++++ .+|++|+++.+.+..+. +.+....  +........|++|+++ |
T Consensus       235 --~r~~i~v~D~a~ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~-~~~i~~~~~~~~~~~~~~d~sk~~~~l  310 (370)
T PLN02695        235 --TRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENK-KLPIKHIPGPEGVRGRNSDNTLIKEKL  310 (370)
T ss_pred             --EEeEEeHHHHHHHHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCC-CCCceecCCCCCccccccCHHHHHHhc
Confidence              899999999999999988754 4579999884 58999999999988753 2222211  2222345689999987 9


Q ss_pred             CCcccccHHHHHHHHHHHHHHc
Q 019415          315 GFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       315 g~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ||+|+++++++|+++++|+++.
T Consensus       311 gw~p~~~l~e~i~~~~~~~~~~  332 (370)
T PLN02695        311 GWAPTMRLKDGLRITYFWIKEQ  332 (370)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999764

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.6e-41  Score=307.20  Aligned_cols=303  Identities=19%  Similarity=0.129  Sum_probs=229.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   82 (341)
                      ++|+||||||+||||+++++.|++.|++|++++| +.........  .+ .....+.++.+|+++.+++.++++.  +|+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~--~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~   78 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSL-DPPTSPNLFE--LL-NLAKKIEDHFGDIRDAAKLRKAIAEFKPEI   78 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeC-CCccchhHHH--HH-hhcCCceEEEccCCCHHHHHHHHhhcCCCE
Confidence            4689999999999999999999999999999999 6654222211  11 1123577899999999999999974  799


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |||+|+...... ...+...+++|+.++.+++++|++.+.+++|||+||.. +|+....     ..+++|++..      
T Consensus        79 vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~-vyg~~~~-----~~~~~e~~~~------  146 (349)
T TIGR02622        79 VFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDK-CYRNDEW-----VWGYRETDPL------  146 (349)
T ss_pred             EEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechh-hhCCCCC-----CCCCccCCCC------
Confidence            999999654432 33445889999999999999998765468999999988 4543221     2356666522      


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cC-------CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SS-------GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTL  232 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-------~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  232 (341)
                          .|.++|+.+|.++|.+++.++ +.       +++++++||+++|||+....   ..+++.+++.+..+. ..++.+
T Consensus       147 ----~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~---~~~~~~~~~~~~~g~~~~~~~g  219 (349)
T TIGR02622       147 ----GGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE---DRLIPDVIRAFSSNKIVIIRNP  219 (349)
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh---hhhhHHHHHHHhcCCCeEECCC
Confidence                346889999999999998876 32       89999999999999975321   235667777666554 334444


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCC-----CCCceEEEecc---ccCHHHHHHHHHHhCCCCccccCc-----CCC
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKP-----SMSGRFFCTNV---FVSSAEIASCLQQNYPEFHIKQEY-----LDV  299 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-----~~~g~~n~~~~---~~s~~e~~~~i~~~~~~~~~~~~~-----~~~  299 (341)
                      .+      .++|+|++|+|++++.++++.     ...++||++++   .+++.|++..+.+.++..++.+..     .+.
T Consensus       220 ~~------~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  293 (349)
T TIGR02622       220 DA------TRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPH  293 (349)
T ss_pred             Cc------ccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCc
Confidence            44      999999999999999887642     22469999863   599999999999887543322221     123


Q ss_pred             CcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          300 PKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       300 ~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ......+|++|+++ |||+|+++++++|+++++|++..
T Consensus       294 ~~~~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~  331 (349)
T TIGR02622       294 EARLLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAW  331 (349)
T ss_pred             ccceeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            44567889999988 99999999999999999999764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=3.5e-41  Score=306.22  Aligned_cols=305  Identities=18%  Similarity=0.155  Sum_probs=223.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC-ChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY-DPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~V   83 (341)
                      ||+||||||+||||++|+++|++. |++|++++| +...   ...+..    ..+++++.+|++ +.+.+.++++++|+|
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r-~~~~---~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~d~V   72 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDM-QTDR---LGDLVN----HPRMHFFEGDITINKEWIEYHVKKCDVI   72 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeC-cHHH---HHHhcc----CCCeEEEeCCCCCCHHHHHHHHcCCCEE
Confidence            478999999999999999999986 699999988 5422   111111    136899999997 677888889999999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+|+...... .......+++|+.++.+++++|++.+  ++|||+||.. +|+...      ..+++|++.... +. |
T Consensus        73 iH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~-vyg~~~------~~~~~ee~~~~~-~~-~  141 (347)
T PRK11908         73 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSE-VYGMCP------DEEFDPEASPLV-YG-P  141 (347)
T ss_pred             EECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecce-eeccCC------CcCcCccccccc-cC-c
Confidence            99999755432 23344788999999999999999986  7999999998 454322      235666542110 00 0


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCC----CCCCchhhhhHhhHhcCcc--ccccccch
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPY----SSTPVSVIGGLCQLTNNEY--VYQTLRDT  235 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~  235 (341)
                       ...|.+.|+.+|.++|+.++.++ +.+++++++||+++|||+....    .....++..++..+..+..  ..+.+.+ 
T Consensus       142 -~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~-  219 (347)
T PRK11908        142 -INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQ-  219 (347)
T ss_pred             -CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCce-
Confidence             01346789999999999999998 6799999999999999975431    0112345566655554442  2233333 


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCC--C-CceEEEecc--ccCHHHHHHHHHHhCCCCc-c-------ccCc-C----
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPS--M-SGRFFCTNV--FVSSAEIASCLQQNYPEFH-I-------KQEY-L----  297 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~g~~n~~~~--~~s~~e~~~~i~~~~~~~~-~-------~~~~-~----  297 (341)
                           .++|||++|+++++..+++++.  . +++||++++  .+|++|+++.+.+.++..+ +       .... .    
T Consensus       220 -----~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
T PRK11908        220 -----KRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAY  294 (347)
T ss_pred             -----eeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhc
Confidence                 9999999999999999998753  2 459999884  4899999999998774211 1       0000 0    


Q ss_pred             ----CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          298 ----DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       298 ----~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                          .........|++|+++ |||+|+++++++++++++|++..
T Consensus       295 ~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~  338 (347)
T PRK11908        295 YGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGH  338 (347)
T ss_pred             cCcCcchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence                0122344568899987 99999999999999999999865

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=4.8e-41  Score=304.83  Aligned_cols=302  Identities=13%  Similarity=0.087  Sum_probs=225.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch--hhhhHhhh-C-CCCCCceEEEecCCCChHHHHHHhcC--C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK--SKVDLLKS-L-PGAETRLIFFEAEIYDPDTFENAIQG--C   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~-~-~~~~~~~~~~~~Dl~~~~~~~~~~~~--~   80 (341)
                      |+||||||+||||++|++.|++.|++|++++| +....  .....+.. . .....+++++.+|++|.+.+.+++++  +
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIR-RSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEec-CCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999 65321  11222111 0 11124689999999999999999984  6


Q ss_pred             CEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcC---EEEEecccccccCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVK---RLIYTASVLCASPLKEDGSAGYKDSIDETCYTP  156 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~---~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (341)
                      |+|||+|+...... .......+++|+.++.+++++|++.+ ++   +|||+||.+ +|+...      ..+++|+++. 
T Consensus        80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~-vyg~~~------~~~~~E~~~~-  150 (343)
T TIGR01472        80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSE-LYGKVQ------EIPQNETTPF-  150 (343)
T ss_pred             CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHH-hhCCCC------CCCCCCCCCC-
Confidence            99999999865433 22234677889999999999999987 53   899999998 554332      3457777532 


Q ss_pred             CCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc---cccccc
Q 019415          157 PDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE---YVYQTL  232 (341)
Q Consensus       157 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  232 (341)
                               .|.++|+.||..+|.+++.++ +.+++++..|+.++|||+.... .....+..++..+..+.   ..++++
T Consensus       151 ---------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~g  220 (343)
T TIGR01472       151 ---------YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGEN-FVTRKITRAAAKIKLGLQEKLYLGNL  220 (343)
T ss_pred             ---------CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc-ccchHHHHHHHHHHcCCCCceeeCCC
Confidence                     346899999999999999998 5689999999999999964322 12223334444444333   223444


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCc-c------------------
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFH-I------------------  292 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~-~------------------  292 (341)
                      .+      .++|+||+|+|++++.+++++. .+.||++++ .+|+.|+++.+.+.++... .                  
T Consensus       221 ~~------~rd~i~V~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  293 (343)
T TIGR01472       221 DA------KRDWGHAKDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVH  293 (343)
T ss_pred             cc------ccCceeHHHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCcee
Confidence            44      9999999999999999998653 479999884 5999999999999885211 0                  


Q ss_pred             -ccC---cCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHH
Q 019415          293 -KQE---YLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRK  335 (341)
Q Consensus       293 -~~~---~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~  335 (341)
                       +..   ..+........|++|+++ |||+|+++++++|+++++++++
T Consensus       294 ~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       294 VEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             EEeCccccCCCccchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence             000   123344555779999987 9999999999999999999875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=5.2e-41  Score=312.03  Aligned_cols=319  Identities=16%  Similarity=0.073  Sum_probs=221.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh--------------hhHhhhCC-CCCCceEEEecCCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK--------------VDLLKSLP-GAETRLIFFEAEIYD   69 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------------~~~~~~~~-~~~~~~~~~~~Dl~~   69 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| .......              ...+.... ....+++++.+|++|
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN-LCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec-cccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            5689999999999999999999999999999864 3211000              00111000 011368899999999


Q ss_pred             hHHHHHHhc--CCCEEEEeccCCcccc--c--hhHhHhhhhhhhHHHHHHHHHHhcCCcC-EEEEecccccccCCCCCCC
Q 019415           70 PDTFENAIQ--GCDFVFHVATPLQHID--G--YLYKNVVEACVGAAKKIASFCVKSGTVK-RLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        70 ~~~~~~~~~--~~d~Vi~~a~~~~~~~--~--~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~I~~Ss~~~~~~~~~~~~  142 (341)
                      ++.+.++++  ++|+|||+|+......  .  ...+..+++|+.++.+++++|++.+ ++ +|||+||.. +|+..... 
T Consensus       125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~-vYG~~~~~-  201 (442)
T PLN02572        125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMG-EYGTPNID-  201 (442)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecce-ecCCCCCC-
Confidence            999999997  5899999998754332  1  1223567899999999999999998 75 999999998 45432100 


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCC----------
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSST----------  211 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~----------  211 (341)
                       ..+.++++++....+ ..+....|.++|+.||.++|.+++.++ ++|++++++||++||||+.......          
T Consensus       202 -~~E~~i~~~~~~~e~-~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        202 -IEEGYITITHNGRTD-TLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             -Ccccccccccccccc-cccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence             001112211000000 000012456899999999999999988 6699999999999999986532101          


Q ss_pred             ---CchhhhhHhhHhcCc--cccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc---eEEEeccccCHHHHHHHH
Q 019415          212 ---PVSVIGGLCQLTNNE--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG---RFFCTNVFVSSAEIASCL  283 (341)
Q Consensus       212 ---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g---~~n~~~~~~s~~e~~~~i  283 (341)
                         ...+..++..+..+.  ..++++.+      .|+|+||+|+|++++.++++....|   +||++++.+|+.|+++.+
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~------~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i  353 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQ------TRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLV  353 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCE------EECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHH
Confidence               123344444444443  23455554      8999999999999999998653333   799988779999999999


Q ss_pred             HHh---CCCCccccCcC-----CCCcceEeecchhhhhcCCcccc---cHHHHHHHHHHHHHHc
Q 019415          284 QQN---YPEFHIKQEYL-----DVPKREIKWGGTKLEEKGFEYNY---DLKMILDDSIKCGRKS  336 (341)
Q Consensus       284 ~~~---~~~~~~~~~~~-----~~~~~~~~~d~~k~~~lg~~~~~---~~~~~l~~~~~~~~~~  336 (341)
                      ++.   ++. +++..+.     +........|.+|+++|||+|++   ++.+++.+++.|++..
T Consensus       354 ~~~~~~~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~LGw~p~~~~~~l~~~l~~~~~~~~~~  416 (442)
T PLN02572        354 TKAGEKLGL-DVEVISVPNPRVEAEEHYYNAKHTKLCELGLEPHLLSDSLLDSLLNFAVKYKDR  416 (442)
T ss_pred             HHHHHhhCC-CCCeeeCCCCcccccccccCccHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence            998   642 2222211     22333556789999889999998   8999999999999865

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=6.1e-41  Score=326.91  Aligned_cols=310  Identities=20%  Similarity=0.210  Sum_probs=229.7

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHH-HHHHhcCCC
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDT-FENAIQGCD   81 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d   81 (341)
                      +.+|+|||||||||||++|++.|+++ ||+|++++| .....   ..+.   . ..+++++.+|++|.+. +.++++++|
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r-~~~~~---~~~~---~-~~~~~~~~gDl~d~~~~l~~~l~~~D  384 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDI-GSDAI---SRFL---G-HPRFHFVEGDISIHSEWIEYHIKKCD  384 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeC-Cchhh---hhhc---C-CCceEEEeccccCcHHHHHHHhcCCC
Confidence            35689999999999999999999986 799999999 55321   1111   1 1368999999998655 577889999


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      +|||+||...... .......+++|+.++.+++++|++.+  ++|||+||.. +|+...      ..+++|+++.....+
T Consensus       385 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~-vyg~~~------~~~~~E~~~~~~~~p  455 (660)
T PRK08125        385 VVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSE-VYGMCT------DKYFDEDTSNLIVGP  455 (660)
T ss_pred             EEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchh-hcCCCC------CCCcCccccccccCC
Confidence            9999999766432 22234788999999999999999987  7999999998 554332      356777764311000


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCC----CCchhhhhHhhHhcCcc--cccccc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSS----TPVSVIGGLCQLTNNEY--VYQTLR  233 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~  233 (341)
                         ...+.+.|+.||.++|++++.++ +++++++++||+++|||+......    ....+..++..+..+..  ..+++.
T Consensus       456 ---~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~  532 (660)
T PRK08125        456 ---INKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGK  532 (660)
T ss_pred             ---CCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCc
Confidence               01245789999999999999998 669999999999999997543100    11245555555554442  234444


Q ss_pred             chhhccCCCCcccHHHHHHHHHHhhcCCC--C-CceEEEecc--ccCHHHHHHHHHHhCCCCccccCcC-----------
Q 019415          234 DTEEILGKLPLVHIDDVCEAHIFCMEKPS--M-SGRFFCTNV--FVSSAEIASCLQQNYPEFHIKQEYL-----------  297 (341)
Q Consensus       234 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~g~~n~~~~--~~s~~e~~~~i~~~~~~~~~~~~~~-----------  297 (341)
                      +      .++|+|++|+|++++.+++++.  . +++||++++  .+|++|+++.+.+..+...+.....           
T Consensus       533 ~------~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  606 (660)
T PRK08125        533 Q------KRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESS  606 (660)
T ss_pred             e------eeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccc
Confidence            4      9999999999999999998653  2 348999885  4899999999999885322111110           


Q ss_pred             ------CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcCCC
Q 019415          298 ------DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSGYL  339 (341)
Q Consensus       298 ------~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~~  339 (341)
                            .........|++|+++ |||+|+++++++|+++++|+++..-|
T Consensus       607 ~~~~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~  655 (660)
T PRK08125        607 SYYGKGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVDL  655 (660)
T ss_pred             cccccccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhcccc
Confidence                  0122344679999988 99999999999999999999988655

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2.4e-41  Score=279.39  Aligned_cols=299  Identities=19%  Similarity=0.178  Sum_probs=242.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|+||||.||||+||+..|...||+|++++- .... .+ ..+... -.+...+.+.-|+..+     ++..+|.|+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn-~ftg-~k-~n~~~~-~~~~~fel~~hdv~~p-----l~~evD~Iy   96 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDN-YFTG-RK-ENLEHW-IGHPNFELIRHDVVEP-----LLKEVDQIY   96 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEec-cccc-ch-hhcchh-ccCcceeEEEeechhH-----HHHHhhhhh
Confidence            4589999999999999999999999999999754 2221 11 111111 0124566666666554     777889999


Q ss_pred             EeccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           85 HVATPLQHID--GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        85 ~~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |+|++.++..  ..+. +++..|+.++.+++-.|++.+  +||+++||+. +||.+.      .+|..|+.|....+.  
T Consensus        97 hLAapasp~~y~~npv-ktIktN~igtln~lglakrv~--aR~l~aSTse-VYgdp~------~hpq~e~ywg~vnpi--  164 (350)
T KOG1429|consen   97 HLAAPASPPHYKYNPV-KTIKTNVIGTLNMLGLAKRVG--ARFLLASTSE-VYGDPL------VHPQVETYWGNVNPI--  164 (350)
T ss_pred             hhccCCCCcccccCcc-ceeeecchhhHHHHHHHHHhC--ceEEEeeccc-ccCCcc------cCCCccccccccCcC--
Confidence            9999988876  4444 889999999999999999998  9999999998 776655      788899888776544  


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhcc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEIL  239 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  239 (341)
                         .+...|...|+.+|.++..|. +.|+.+.|.|+.+.|||.-...  -+.....|..++.+..  ..++++.|     
T Consensus       165 ---gpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~--dgrvvsnf~~q~lr~epltv~g~G~q-----  234 (350)
T KOG1429|consen  165 ---GPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMD--DGRVVSNFIAQALRGEPLTVYGDGKQ-----  234 (350)
T ss_pred             ---CchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccC--CChhhHHHHHHHhcCCCeEEEcCCcc-----
Confidence               668999999999999999999 7799999999999999977766  4567788887777666  56777766     


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCc--CCCCcceEeecchhhhh-cC
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEY--LDVPKREIKWGGTKLEE-KG  315 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~-lg  315 (341)
                       .|+|.||.|++++++++++.. ..+-+|+++ +.+|+.|+|+++.+..+....+...  -+.++....-|.+++++ ||
T Consensus       235 -tRSF~yvsD~Vegll~Lm~s~-~~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~Lg  312 (350)
T KOG1429|consen  235 -TRSFQYVSDLVEGLLRLMESD-YRGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLG  312 (350)
T ss_pred             -eEEEEeHHHHHHHHHHHhcCC-CcCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhC
Confidence             999999999999999999854 456799998 6799999999999998443333322  25688888999999998 99


Q ss_pred             CcccccHHHHHHHHHHHHHHc
Q 019415          316 FEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       316 ~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |.|+.+|+++|..++.|+++.
T Consensus       313 W~Pkv~L~egL~~t~~~fr~~  333 (350)
T KOG1429|consen  313 WEPKVSLREGLPLTVTYFRER  333 (350)
T ss_pred             CCCCCcHHHhhHHHHHHHHHH
Confidence            999999999999999999864

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=1.8e-40  Score=325.26  Aligned_cols=308  Identities=15%  Similarity=0.136  Sum_probs=230.5

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh--c
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI--Q   78 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--~   78 (341)
                      ..+.|+|||||||||||++|++.|+++  +++|++++| .... .....+... ....+++++.+|++|.+.+..++  .
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~-~~~~-~~~~~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~~~   79 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDK-LDYC-SNLKNLNPS-KSSPNFKFVKGDIASADLVNYLLITE   79 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeC-CCcc-chhhhhhhc-ccCCCeEEEECCCCChHHHHHHHhhc
Confidence            346789999999999999999999998  689998887 4311 112222111 11247899999999998888776  5


Q ss_pred             CCCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPP  157 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (341)
                      ++|+|||+|+...... ......++++|+.++.+++++|++.+++++|||+||..+ |+.....   ...+.+|++.   
T Consensus        80 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~v-yg~~~~~---~~~~~~E~~~---  152 (668)
T PLN02260         80 GIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEV-YGETDED---ADVGNHEASQ---  152 (668)
T ss_pred             CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHH-hCCCccc---cccCccccCC---
Confidence            7999999999876543 222347889999999999999999876899999999984 5432210   0111234431   


Q ss_pred             CCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccc
Q 019415          158 DHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRD  234 (341)
Q Consensus       158 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  234 (341)
                             ..|.+.|+.+|..+|++++.+. +.+++++++||++|||++....    .+++.++..+..+.  ..++++.+
T Consensus       153 -------~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~----~~i~~~~~~a~~g~~i~i~g~g~~  221 (668)
T PLN02260        153 -------LLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFILLAMQGKPLPIHGDGSN  221 (668)
T ss_pred             -------CCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc----cHHHHHHHHHhCCCCeEEecCCCc
Confidence                   1246789999999999999987 6799999999999999976432    34555655555444  23344444


Q ss_pred             hhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCc---ccc-CcCCCCcceEeecch
Q 019415          235 TEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFH---IKQ-EYLDVPKREIKWGGT  309 (341)
Q Consensus       235 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~---~~~-~~~~~~~~~~~~d~~  309 (341)
                            .++|+|++|+|+++..+++.....++||+++ +.+|+.|+++.+++.++...   +.. ...+.......+|++
T Consensus       222 ------~r~~ihV~Dva~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~  295 (668)
T PLN02260        222 ------VRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQ  295 (668)
T ss_pred             ------eEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHH
Confidence                  8999999999999999998765667999987 46999999999999985321   111 111334456679999


Q ss_pred             hhhhcCCcccccHHHHHHHHHHHHHHcC
Q 019415          310 KLEEKGFEYNYDLKMILDDSIKCGRKSG  337 (341)
Q Consensus       310 k~~~lg~~~~~~~~~~l~~~~~~~~~~~  337 (341)
                      |+++|||+|+++++++|+++++|+++..
T Consensus       296 k~~~lGw~p~~~~~egl~~~i~w~~~~~  323 (668)
T PLN02260        296 KLKKLGWQERTSWEEGLKKTMEWYTSNP  323 (668)
T ss_pred             HHHHcCCCCCCCHHHHHHHHHHHHHhCh
Confidence            9988999999999999999999998764

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=5.8e-40  Score=298.95  Aligned_cols=306  Identities=13%  Similarity=0.096  Sum_probs=222.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCe-EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYI-VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      ||||||||+||||++|++.|++.|++ |+++.| .... .....+..+.. ...++++.+|++|.+++.++++  ++|+|
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~-~~~~-~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDK-LTYA-GNLESLADVSD-SERYVFEHADICDRAELDRIFAQHQPDAV   77 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecC-CCcc-chHHHHHhccc-CCceEEEEecCCCHHHHHHHHHhcCCCEE
Confidence            58999999999999999999999976 555444 3211 11122222111 2367889999999999999996  48999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhc--------CCcCEEEEecccccccCCCCC-CCC---CCCCCCC
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKS--------GTVKRLIYTASVLCASPLKED-GSA---GYKDSID  150 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~~~I~~Ss~~~~~~~~~~-~~~---~~~~~~~  150 (341)
                      ||+|+...... ....+.++++|+.++.+++++|++.        +++++|||+||.++ |+.... ...   ....+++
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~v-yg~~~~~~~~~~~~~~~~~~  156 (352)
T PRK10084         78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEV-YGDLPHPDEVENSEELPLFT  156 (352)
T ss_pred             EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhh-cCCCCccccccccccCCCcc
Confidence            99999765322 2334689999999999999999874        12679999999984 443110 000   0012355


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--c
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--Y  227 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~  227 (341)
                      |++.          ..|.+.|+.||..+|.+++.++ .++++++++|++.||||+....    .+++.++..+..+.  .
T Consensus       157 E~~~----------~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~----~~~~~~~~~~~~~~~~~  222 (352)
T PRK10084        157 ETTA----------YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE----KLIPLVILNALEGKPLP  222 (352)
T ss_pred             ccCC----------CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc----chHHHHHHHHhcCCCeE
Confidence            6542          2346899999999999999987 6699999999999999975322    24555555554433  3


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCc---cc----cCc---
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFH---IK----QEY---  296 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~---~~----~~~---  296 (341)
                      .++++.+      .++|+|++|+|+++..+++.....++||++++ .+|+.|+++.+++..+...   .+    ...   
T Consensus       223 ~~~~g~~------~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~  296 (352)
T PRK10084        223 IYGKGDQ------IRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVAD  296 (352)
T ss_pred             EeCCCCe------EEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhcccccc
Confidence            3455554      99999999999999999986555569999985 5899999999998875311   11    101   


Q ss_pred             CCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          297 LDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       297 ~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .+.....+.+|++|+++ |||+|+++++++|+++++|++++
T Consensus       297 ~~~~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~  337 (352)
T PRK10084        297 RPGHDRRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN  337 (352)
T ss_pred             CCCCCceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence            12234456799999987 99999999999999999999875

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=8.7e-40  Score=296.32  Aligned_cols=304  Identities=13%  Similarity=0.085  Sum_probs=227.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch--hhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK--SKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~--~   79 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +....  .....+.. ......++.++.+|++|.+.+.++++  +
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIR-RSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEec-ccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            4689999999999999999999999999999988 64321  12222211 01112468899999999999999887  4


Q ss_pred             CCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcC-----EEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVK-----RLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                      +|+|||+|+...... ....+..+++|+.++.+++++|.+.+ ++     +|||+||.. +|+...       .+++|++
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~-vyg~~~-------~~~~E~~  154 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSE-MYGSTP-------PPQSETT  154 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHH-HhCCCC-------CCCCCCC
Confidence            799999999865432 22345778999999999999999987 64     899999988 554332       2567765


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-c-c-c
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-Y-V-Y  229 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~  229 (341)
                      ..          .|.+.|+.||.++|.+++.++ +++++++..|+.++|||+.... ..+..+..++..+..+. . . .
T Consensus       155 ~~----------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  223 (340)
T PLN02653        155 PF----------HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGEN-FVTRKITRAVGRIKVGLQKKLFL  223 (340)
T ss_pred             CC----------CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcc-cchhHHHHHHHHHHcCCCCceEe
Confidence            22          346889999999999999998 6789999999999999964432 12223444444444443 2 2 2


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCC---ccccCc---CCCCcc
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEF---HIKQEY---LDVPKR  302 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~---~~~~~~---~~~~~~  302 (341)
                      +++.+      .++|+|++|+|++++.++++.. .+.||++++ .+|+.|+++.+.+..+..   .+....   .+....
T Consensus       224 g~g~~------~rd~i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~  296 (340)
T PLN02653        224 GNLDA------SRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVD  296 (340)
T ss_pred             CCCcc------eecceeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccc
Confidence            44444      9999999999999999998643 579999875 599999999999988531   111111   234555


Q ss_pred             eEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          303 EIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       303 ~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ...+|++|+++ |||+|+++++++|+++++|++..
T Consensus       297 ~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~  331 (340)
T PLN02653        297 NLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLEL  331 (340)
T ss_pred             cccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            66789999987 99999999999999999998753

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.8e-39  Score=291.44  Aligned_cols=302  Identities=17%  Similarity=0.138  Sum_probs=226.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDFV   83 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~V   83 (341)
                      +||||||||+||++++++|++.|  ++|++++| .... ...+.+..+.. .++++++.+|++|++.+.+++++  +|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~-~~~~-~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDK-LTYA-GNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecC-CCcc-hhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            59999999999999999999987  78988876 4321 11112222111 13688999999999999999987  9999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+|+...... .+..+..+++|+.++.+++++|.+.+...++||+||..+++....      ..+++|.+..       
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~------~~~~~e~~~~-------  144 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEK------GDAFTETTPL-------  144 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCC------CCCcCCCCCC-------
Confidence            99999765433 333457899999999999999998752248999999985443222      2356676532       


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhcc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEIL  239 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  239 (341)
                         .+.+.|+.+|..+|.+++.++ +.+++++++||+.+||+.....    .+++.++..+..+.  ..++.+.+     
T Consensus       145 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~~-----  212 (317)
T TIGR01181       145 ---APSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE----KLIPLMITNALAGKPLPVYGDGQQ-----  212 (317)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc----cHHHHHHHHHhcCCCceEeCCCce-----
Confidence               235789999999999999987 6799999999999999975432    34666666555443  23344443     


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhhhh-c
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKLEE-K  314 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~-l  314 (341)
                       .++|+|++|+|+++..++++...+++||++++ .+|+.|+++.+.+.++..+.....   .+.......+|++|+++ |
T Consensus       213 -~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l  291 (317)
T TIGR01181       213 -VRDWLYVEDHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKREL  291 (317)
T ss_pred             -EEeeEEHHHHHHHHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHh
Confidence             89999999999999999986555569999874 699999999999999642221111   12223344689999977 9


Q ss_pred             CCcccccHHHHHHHHHHHHHHcCC
Q 019415          315 GFEYNYDLKMILDDSIKCGRKSGY  338 (341)
Q Consensus       315 g~~~~~~~~~~l~~~~~~~~~~~~  338 (341)
                      ||+|+++++++++++++|+++.+.
T Consensus       292 G~~p~~~~~~~i~~~~~~~~~~~~  315 (317)
T TIGR01181       292 GWAPKYTFEEGLRKTVQWYLDNEW  315 (317)
T ss_pred             CCCCCCcHHHHHHHHHHHHHhccC
Confidence            999998999999999999988764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=1.4e-39  Score=289.25  Aligned_cols=274  Identities=14%  Similarity=0.046  Sum_probs=208.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      ||||||||+||||++|++.|+++| +|++++| ..                   ..+.+|++|++.+.++++  ++|+||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~-~~-------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vi   59 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDV-HS-------------------TDYCGDFSNPEGVAETVRKIRPDVIV   59 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecc-cc-------------------ccccCCCCCHHHHHHHHHhcCCCEEE
Confidence            689999999999999999999999 7988888 32                   135689999999999998  589999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |||+...... ....+..+++|+.++.+++++|++.+ + +|||+||..+ |+...      ..+++|++..        
T Consensus        60 h~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~V-y~~~~------~~p~~E~~~~--------  122 (299)
T PRK09987         60 NAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYV-FPGTG------DIPWQETDAT--------  122 (299)
T ss_pred             ECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceE-ECCCC------CCCcCCCCCC--------
Confidence            9999877643 23345778899999999999999998 4 7999999985 54332      4578888632        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhccCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEILGK  241 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  241 (341)
                        .|.+.|+.+|.++|++++.+.   .+.+++|++++|||+..      .++..+++.+..+.  ..+++  +  .+.+.
T Consensus       123 --~P~~~Yg~sK~~~E~~~~~~~---~~~~ilR~~~vyGp~~~------~~~~~~~~~~~~~~~~~v~~d--~--~g~~~  187 (299)
T PRK09987        123 --APLNVYGETKLAGEKALQEHC---AKHLIFRTSWVYAGKGN------NFAKTMLRLAKEREELSVIND--Q--FGAPT  187 (299)
T ss_pred             --CCCCHHHHHHHHHHHHHHHhC---CCEEEEecceecCCCCC------CHHHHHHHHHhcCCCeEEeCC--C--cCCCC
Confidence              347899999999999998775   36799999999999643      24566776665544  22322  1  02224


Q ss_pred             CCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCC--CCcc--------ccC---cCCCCcceEeec
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYP--EFHI--------KQE---YLDVPKREIKWG  307 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~--~~~~--------~~~---~~~~~~~~~~~d  307 (341)
                      +.+.+++|++.++..++......|+||+++ +.+|+.|+++.+.+..+  +...        +..   .....+.+..+|
T Consensus       188 ~~~~~~d~~~~~~~~~~~~~~~~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld  267 (299)
T PRK09987        188 GAELLADCTAHAIRVALNKPEVAGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLN  267 (299)
T ss_pred             CHHHHHHHHHHHHHHhhccCCCCCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCC
Confidence            566678888998888876655567999987 56999999999977532  1111        111   112356777899


Q ss_pred             chhhhh-cCCcccccHHHHHHHHHHHHH
Q 019415          308 GTKLEE-KGFEYNYDLKMILDDSIKCGR  334 (341)
Q Consensus       308 ~~k~~~-lg~~~~~~~~~~l~~~~~~~~  334 (341)
                      ++|+++ |||+|. +|+++|+++++.+.
T Consensus       268 ~~k~~~~lg~~~~-~~~~~l~~~~~~~~  294 (299)
T PRK09987        268 TEKFQQNFALVLP-DWQVGVKRMLTELF  294 (299)
T ss_pred             HHHHHHHhCCCCc-cHHHHHHHHHHHHh
Confidence            999988 999987 99999999998663

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=4.2e-39  Score=293.39  Aligned_cols=313  Identities=17%  Similarity=0.167  Sum_probs=227.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh-hhhHhhhCC-CCCCceEEEecCCCChHHHHHHhc--CC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS-KVDLLKSLP-GAETRLIFFEAEIYDPDTFENAIQ--GC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~--~~   80 (341)
                      ++++|||||||||||++|++.|+++|++|++++| ...... ....+.... ....+++++.+|+++++.+.++++  ++
T Consensus         4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~   82 (352)
T PLN02240          4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDN-LDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF   82 (352)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence            3579999999999999999999999999999987 543211 112222211 122468899999999999999886  68


Q ss_pred             CEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDH  159 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (341)
                      |+|||+|+...... .......++.|+.++.+++++|++.+ +++|||+||.+ +|+...      ..+++|++..    
T Consensus        83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~-vyg~~~------~~~~~E~~~~----  150 (352)
T PLN02240         83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSAT-VYGQPE------EVPCTEEFPL----  150 (352)
T ss_pred             CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHH-HhCCCC------CCCCCCCCCC----
Confidence            99999999754322 23345789999999999999999988 89999999987 554332      4567887632    


Q ss_pred             CCccCcchhhhHHHhHHHHHHHHHhhc-c-CCceEEEEecCceeCCCCCCC-----CCCC-chhhhhHhhHhcCcc---c
Q 019415          160 PLTCHNEYLRVYIESKMKSEKELLSYG-S-SGLEVVALALGVVAGDTNLPY-----SSTP-VSVIGGLCQLTNNEY---V  228 (341)
Q Consensus       160 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-~~~~~~vlRp~~v~G~~~~~~-----~~~~-~~~~~~~~~~~~~~~---~  228 (341)
                            .+.+.|+.+|..+|++++.+. . .+++++++|++++||++....     ...+ .+.+.+.....+...   .
T Consensus       151 ------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PLN02240        151 ------SATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV  224 (352)
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence                  235789999999999999886 3 478999999999999754211     0011 123333333222221   2


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCC----CCC-ceEEEec-cccCHHHHHHHHHHhCCCCccccCcC---CC
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP----SMS-GRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEYL---DV  299 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~----~~~-g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~---~~  299 (341)
                      .+.....++|.+.++|||++|+|++++.+++..    ... ++||+++ +.+|++|+++.+++.++. +.+....   +.
T Consensus       225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~  303 (352)
T PLN02240        225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGK-KIPLKLAPRRPG  303 (352)
T ss_pred             eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCC-CCCceeCCCCCC
Confidence            221111123455899999999999999888642    233 4999987 569999999999999852 3333222   23


Q ss_pred             CcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcC
Q 019415          300 PKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSG  337 (341)
Q Consensus       300 ~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~  337 (341)
                      .......|++|+++ |||+|+++++++|+++++|+++++
T Consensus       304 ~~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~  342 (352)
T PLN02240        304 DAEEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNP  342 (352)
T ss_pred             ChhhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence            33455679999987 999999999999999999999874

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=8.5e-40  Score=292.47  Aligned_cols=288  Identities=20%  Similarity=0.206  Sum_probs=205.7

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh---HH-HHHHhc-----C
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP---DT-FENAIQ-----G   79 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~-~~~~~~-----~   79 (341)
                      ||||||+||||++|++.|++.|++|+++.| +.......            ..+..+|+.|.   +. +.++++     +
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~-~~~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   68 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVD-NLKDGTKF------------VNLVDLDIADYMDKEDFLAQIMAGDDFGD   68 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEec-CCCcchHH------------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence            899999999999999999999998887777 55331111            01223445443   33 334432     6


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDH  159 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (341)
                      +|+|||+|+.......+ .+..++.|+.++.+++++|++.+ + +|||+||.+ +|+...      ..+.+|+++.    
T Consensus        69 ~d~Vih~A~~~~~~~~~-~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~-vyg~~~------~~~~~E~~~~----  134 (308)
T PRK11150         69 IEAIFHEGACSSTTEWD-GKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAA-TYGGRT------DDFIEEREYE----  134 (308)
T ss_pred             ccEEEECceecCCcCCC-hHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchH-HhCcCC------CCCCccCCCC----
Confidence            89999999865443322 23678999999999999999988 6 699999998 454322      2345665422    


Q ss_pred             CCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhh
Q 019415          160 PLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEE  237 (341)
Q Consensus       160 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  237 (341)
                            .|.+.|+.+|..+|+.++.+. +.+++++++||+++||++.......+.+...+...+..+. ..+..    ++
T Consensus       135 ------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----g~  204 (308)
T PRK11150        135 ------KPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFE----GS  204 (308)
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEec----CC
Confidence                  346789999999999999987 6699999999999999986543223334444545554443 22211    11


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcCC-----CCcceEeecchhh
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYLD-----VPKREIKWGGTKL  311 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~d~~k~  311 (341)
                      +...++|+|++|+|++++.+++.. ..++||++++ .+|+.|+++.+.+..+..++.....+     .......+|++|+
T Consensus       205 ~~~~r~~i~v~D~a~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  283 (308)
T PRK11150        205 ENFKRDFVYVGDVAAVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLKGRYQAFTQADLTKL  283 (308)
T ss_pred             CceeeeeeeHHHHHHHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccccccceecccCHHHH
Confidence            223799999999999999998753 4579999885 58999999999998853222211111     1123456899999


Q ss_pred             hhcCCccc-ccHHHHHHHHHHHHH
Q 019415          312 EEKGFEYN-YDLKMILDDSIKCGR  334 (341)
Q Consensus       312 ~~lg~~~~-~~~~~~l~~~~~~~~  334 (341)
                      +++||+|+ .+++++|+++++|+.
T Consensus       284 ~~~g~~p~~~~~~~gl~~~~~~~~  307 (308)
T PRK11150        284 RAAGYDKPFKTVAEGVAEYMAWLN  307 (308)
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHhh
Confidence            88999987 489999999999974

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.8e-39  Score=290.17  Aligned_cols=283  Identities=17%  Similarity=0.166  Sum_probs=211.9

Q ss_pred             EEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEEEec
Q 019415           10 CVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVFHVA   87 (341)
Q Consensus        10 lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi~~a   87 (341)
                      |||||+||||++|++.|++.|++|+++.+ .                      ..+|+++.+++.++++  ++|+|||||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~-~----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT-H----------------------KELDLTRQADVEAFFAKEKPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeec-c----------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence            69999999999999999999999876544 1                      2489999999999887  579999999


Q ss_pred             cCCccc--cchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           88 TPLQHI--DGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        88 ~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +.....  ........++.|+.++.+++++|++.+ +++|||+||+. +|+...      ..+++|+++....      .
T Consensus        58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~-vyg~~~------~~~~~E~~~~~~~------~  123 (306)
T PLN02725         58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSC-IYPKFA------PQPIPETALLTGP------P  123 (306)
T ss_pred             eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCcee-ecCCCC------CCCCCHHHhccCC------C
Confidence            975432  122234789999999999999999998 99999999998 454333      4678887643210      1


Q ss_pred             chh-hhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHh----hHhcCcc-c--cccccchh
Q 019415          166 EYL-RVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC----QLTNNEY-V--YQTLRDTE  236 (341)
Q Consensus       166 ~~~-~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~----~~~~~~~-~--~~~~~~~~  236 (341)
                      .|. ..|+.+|.++|++++.+. ..+++++++||+.+||++.......+..++.++.    ....+.+ .  ++.+.+  
T Consensus       124 ~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~--  201 (306)
T PLN02725        124 EPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSP--  201 (306)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCe--
Confidence            222 359999999999998887 5689999999999999975421111222333332    2222321 1  233443  


Q ss_pred             hccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcC---CCCcceEeecchhhh
Q 019415          237 EILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYL---DVPKREIKWGGTKLE  312 (341)
Q Consensus       237 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k~~  312 (341)
                          .++|+|++|+++++..+++.....+.||++++ .+|+.|+++.+++.++. +......   +.......+|++|++
T Consensus       202 ----~~~~i~v~Dv~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~  276 (306)
T PLN02725        202 ----LREFLHVDDLADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGF-EGELVWDTSKPDGTPRKLMDSSKLR  276 (306)
T ss_pred             ----eeccccHHHHHHHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCC-CCceeecCCCCCcccccccCHHHHH
Confidence                88999999999999999987555568899874 68999999999998852 2111111   222345678999998


Q ss_pred             hcCCcccccHHHHHHHHHHHHHHc
Q 019415          313 EKGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       313 ~lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +|||+|+++++++|+++++|++++
T Consensus       277 ~lg~~p~~~~~~~l~~~~~~~~~~  300 (306)
T PLN02725        277 SLGWDPKFSLKDGLQETYKWYLEN  300 (306)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHhh
Confidence            899999999999999999999875

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=9e-39  Score=288.38  Aligned_cols=297  Identities=25%  Similarity=0.373  Sum_probs=223.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+||||||+||||+++++.|++.|++|++++| +....   ..+.     ..+++++.+|+.+++.+.++++++|+|||+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~---~~~~-----~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~   71 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVR-PTSDR---RNLE-----GLDVEIVEGDLRDPASLRKAVAGCRALFHV   71 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEe-cCccc---cccc-----cCCceEEEeeCCCHHHHHHHHhCCCEEEEe
Confidence            57999999999999999999999999999999 65431   1111     126889999999999999999999999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNE  166 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  166 (341)
                      |+....... .++..++.|+.++.++++++.+.+ +++|||+||..+++....      ..+++|+....+       ..
T Consensus        72 a~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~------~~~~~e~~~~~~-------~~  136 (328)
T TIGR03466        72 AADYRLWAP-DPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGD------GTPADETTPSSL-------DD  136 (328)
T ss_pred             ceecccCCC-CHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCC------CCCcCccCCCCc-------cc
Confidence            986543322 245889999999999999999988 899999999985442222      346777653322       11


Q ss_pred             hhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          167 YLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       167 ~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                      ..+.|+.+|.++|++++.+. +.+++++++||+.+||++....  .. ....+...+.+..+...  .      ..++|+
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~--~~-~~~~~~~~~~~~~~~~~--~------~~~~~i  205 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKP--TP-TGRIIVDFLNGKMPAYV--D------TGLNLV  205 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCC--Cc-HHHHHHHHHcCCCceee--C------CCcceE
Confidence            24689999999999999988 5699999999999999976533  11 11222333322222221  1      167899


Q ss_pred             cHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCC----ccccCc--------------CCCC-------
Q 019415          246 HIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEF----HIKQEY--------------LDVP-------  300 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~----~~~~~~--------------~~~~-------  300 (341)
                      |++|+|+++..++++...+..|+++++.+|+.|+++.+.+.++..    .+|...              ....       
T Consensus       206 ~v~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (328)
T TIGR03466       206 HVDDVAEGHLLALERGRIGERYILGGENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDG  285 (328)
T ss_pred             EHHHHHHHHHHHHhCCCCCceEEecCCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence            999999999999987554447888777799999999999988532    111100              0000       


Q ss_pred             ----cceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcCCC
Q 019415          301 ----KREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSGYL  339 (341)
Q Consensus       301 ----~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~~  339 (341)
                          .....+|++|+++ |||+|+ +++++|.++++|+++.|+|
T Consensus       286 ~~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~~~  328 (328)
T TIGR03466       286 VRMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANGYL  328 (328)
T ss_pred             HHHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhCCC
Confidence                1356789999987 999997 9999999999999999986

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=3.3e-38  Score=285.89  Aligned_cols=309  Identities=17%  Similarity=0.132  Sum_probs=223.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      |+||||||+||||++|++.|+++|++|++++| ....... ...+....  ...+.++.+|++|++.+.++++  ++|+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDN-LCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALLTEILHDHAIDTV   77 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEec-CCCchHhHHHHHHHhc--CCCceEEEccCCCHHHHHHHHhcCCCCEE
Confidence            68999999999999999999999999999877 4332121 12222211  1357789999999999999886  58999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+|+...... .......+++|+.++.+++++|++.+ +++||++||.+ +|+...      ..+++|+++..      
T Consensus        78 vh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~-~yg~~~------~~~~~E~~~~~------  143 (338)
T PRK10675         78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSAT-VYGDQP------KIPYVESFPTG------  143 (338)
T ss_pred             EECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHH-hhCCCC------CCccccccCCC------
Confidence            99998765322 22234788999999999999999998 89999999987 454332      45677776321      


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-c-CCceEEEEecCceeCCCCCCC-----CC-CCchhhhhHhhHhcCcc---cccc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-S-SGLEVVALALGVVAGDTNLPY-----SS-TPVSVIGGLCQLTNNEY---VYQT  231 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~-~~~~~~vlRp~~v~G~~~~~~-----~~-~~~~~~~~~~~~~~~~~---~~~~  231 (341)
                         .+.+.|+.+|..+|++++.++ + .+++++++|++++||+.....     .. ...+.+.+.+...+...   .++.
T Consensus       144 ---~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (338)
T PRK10675        144 ---TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGN  220 (338)
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCC
Confidence               235789999999999999987 3 379999999999999753211     00 11233344333332221   1111


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCC--CC-CceEEEecc-ccCHHHHHHHHHHhCCCCccccCcC---CCCcceE
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SM-SGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYL---DVPKREI  304 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~-~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~  304 (341)
                      .-..+++.+.++|+|++|+|++++.+++..  .. .++||++++ .+|+.|+++.+.+..+. +.+....   +......
T Consensus       221 ~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~  299 (338)
T PRK10675        221 DYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAY  299 (338)
T ss_pred             cCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCC-CCCeeeCCCCCCchhhh
Confidence            111122344899999999999999998752  22 249999875 59999999999999853 3333222   2234556


Q ss_pred             eecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          305 KWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       305 ~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ++|++|+++ |||+|+++++++|+++++|++++
T Consensus       300 ~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~  332 (338)
T PRK10675        300 WADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_pred             hcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence            789999987 99999999999999999999874

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=7.7e-38  Score=280.56  Aligned_cols=296  Identities=24%  Similarity=0.248  Sum_probs=230.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC-CEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC-DFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-d~Vi~   85 (341)
                      |+||||||+||||++|++.|+++||+|++++| .........         ..+.++.+|+++.+...+..+.. |+|||
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~d~vih   70 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDR-LRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGVPDAVIH   70 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeC-CCccccccc---------cccceeeecccchHHHHHHHhcCCCEEEE
Confidence            45999999999999999999999999999999 654311111         36789999999998888888887 99999


Q ss_pred             eccCCccccch--hHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           86 VATPLQHIDGY--LYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        86 ~a~~~~~~~~~--~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      +|+........  ....+++.|+.++.+++++|++.+ +++|||.||.+++++. ..     ..+++|+. .+.      
T Consensus        71 ~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~-~~-----~~~~~E~~-~~~------  136 (314)
T COG0451          71 LAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGD-PP-----PLPIDEDL-GPP------  136 (314)
T ss_pred             ccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCC-CC-----CCCccccc-CCC------
Confidence            99988766522  234689999999999999999977 9999998887766644 21     34788874 222      


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCc-hhhhhHhhHhcCcc--cc-ccccchhhc
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPV-SVIGGLCQLTNNEY--VY-QTLRDTEEI  238 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~--~~-~~~~~~~~~  238 (341)
                        .|.++|+.+|.++|+.++.+. ..+++++++||+++|||+....  .+. +...++..+.....  .. +++..    
T Consensus       137 --~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  208 (314)
T COG0451         137 --RPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPD--LSSGVVSAFIRQLLKGEPIIVIGGDGSQ----  208 (314)
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCC--CCcCcHHHHHHHHHhCCCcceEeCCCce----
Confidence              334589999999999999998 5789999999999999988765  332 34333333333332  22 22232    


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc--ccCHHHHHHHHHHhCCCCccccC-----cCCCCcceEeecchhh
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV--FVSSAEIASCLQQNYPEFHIKQE-----YLDVPKREIKWGGTKL  311 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~--~~s~~e~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~d~~k~  311 (341)
                        .++++|++|+++++..+++++... .||++++  .+++.|+++.+.+.++.......     ..........+|.+|+
T Consensus       209 --~~~~i~v~D~a~~~~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (314)
T COG0451         209 --TRDFVYVDDVADALLLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKA  285 (314)
T ss_pred             --eEeeEeHHHHHHHHHHHHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHH
Confidence              789999999999999999987666 9999985  68999999999998854322111     1234556778999999


Q ss_pred             hh-cCCcccccHHHHHHHHHHHHHHcC
Q 019415          312 EE-KGFEYNYDLKMILDDSIKCGRKSG  337 (341)
Q Consensus       312 ~~-lg~~~~~~~~~~l~~~~~~~~~~~  337 (341)
                      +. |||.|+.++++++.++++|+....
T Consensus       286 ~~~lg~~p~~~~~~~i~~~~~~~~~~~  312 (314)
T COG0451         286 RAALGWEPKVSLEEGLADTLEWLLKKL  312 (314)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence            86 999999899999999999998754

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=5.9e-38  Score=265.65  Aligned_cols=310  Identities=19%  Similarity=0.203  Sum_probs=245.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc--hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED--KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   81 (341)
                      .++||||||.||||+|.+.+|+++||.|.+++  |..+  ...+++.+.+-.....+.++++|++|.+.++++|+  +.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vD--Nl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd   79 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVD--NLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFD   79 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEe--cccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCc
Confidence            47899999999999999999999999999864  3333  23444444443334789999999999999999997  689


Q ss_pred             EEEEeccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID--GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDH  159 (341)
Q Consensus        82 ~Vi~~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (341)
                      .|+|+|+.....+  .++ ...+.+|+.|+.++++.+++.+ ++.+||.||+. +|+.+.      .-|++|++++..  
T Consensus        80 ~V~Hfa~~~~vgeS~~~p-~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssat-vYG~p~------~ip~te~~~t~~--  148 (343)
T KOG1371|consen   80 AVMHFAALAAVGESMENP-LSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSAT-VYGLPT------KVPITEEDPTDQ--  148 (343)
T ss_pred             eEEeehhhhccchhhhCc-hhheehhhhhHHHHHHHHHHcC-CceEEEeccee-eecCcc------eeeccCcCCCCC--
Confidence            9999999877665  444 4889999999999999999999 99999999998 676655      679999985541  


Q ss_pred             CCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeC--CCCCCCCC----CCchhhhhHhhHhcCc---ccc
Q 019415          160 PLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAG--DTNLPYSS----TPVSVIGGLCQLTNNE---YVY  229 (341)
Q Consensus       160 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G--~~~~~~~~----~~~~~~~~~~~~~~~~---~~~  229 (341)
                             |.++|+.+|..+|+++..+. ..++.++.||.++++|  |+......    .+...+.+.+......   ..+
T Consensus       149 -------p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~  221 (343)
T KOG1371|consen  149 -------PTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVV  221 (343)
T ss_pred             -------CCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceee
Confidence                   57999999999999999998 5579999999999999  43333211    1112322333332222   556


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCCCC---CceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcc
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM---SGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKR  302 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~  302 (341)
                      +..-.+-+|+..++++|+-|.|..+..++.+...   .++||++++ ..++.+|+++++++.+ ..+|...   ..++..
T Consensus       222 g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g-~~~k~~~v~~R~gdv~  300 (343)
T KOG1371|consen  222 GRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALG-VKIKKKVVPRRNGDVA  300 (343)
T ss_pred             cCcccccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhc-CCCCccccCCCCCCce
Confidence            6666677788899999999999999999987654   249999885 5899999999999984 3333332   356778


Q ss_pred             eEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          303 EIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       303 ~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ....+.+++++ |||+|.+.++++++++.+|..+.
T Consensus       301 ~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~n  335 (343)
T KOG1371|consen  301 FVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQN  335 (343)
T ss_pred             eeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcC
Confidence            88899999865 99999999999999999999876

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=1.8e-37  Score=278.24  Aligned_cols=295  Identities=18%  Similarity=0.160  Sum_probs=215.3

Q ss_pred             EEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----CCCEE
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----GCDFV   83 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~V   83 (341)
                      |||||||||||+++++.|.++|+ +|.++.| .... ..   +..+     ....+..|+.+.+.++.+.+    ++|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~-~~~~-~~---~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDN-LRDG-HK---FLNL-----ADLVIADYIDKEDFLDRLEKGAFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEec-CCCc-hh---hhhh-----hheeeeccCcchhHHHHHHhhccCCCCEE
Confidence            69999999999999999999997 7888777 4322 11   1111     11356788888877777654    79999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+|+....... +....+++|+.++.+++++|.+.+ + +|||+||.+ +|+..       ..+++|++..        
T Consensus        71 vh~A~~~~~~~~-~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~-vy~~~-------~~~~~e~~~~--------  131 (314)
T TIGR02197        71 FHQGACSDTTET-DGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAA-TYGDG-------EAGFREGREL--------  131 (314)
T ss_pred             EECccccCcccc-chHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHH-hcCCC-------CCCcccccCc--------
Confidence            999997554333 345788999999999999999988 5 799999998 55432       2345555421        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-c--CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhc
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-S--SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEI  238 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~--~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  238 (341)
                       ..|.+.|+.+|..+|.+++.+. .  .+++++++||+.+||++..........+..++..+..+.  ..++.....++|
T Consensus       132 -~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (314)
T TIGR02197       132 -ERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDG  210 (314)
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCC
Confidence             1246789999999999998764 2  367999999999999986543112334445555544443  222222333445


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCc-cccCcCCC-----CcceEeecchhh
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFH-IKQEYLDV-----PKREIKWGGTKL  311 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~-~~~~~~~~-----~~~~~~~d~~k~  311 (341)
                      .+.++|+|++|+++++..++.+ ...++||+++ .++|+.|+++.+.+.++... +.....+.     ......+|++|+
T Consensus       211 ~~~~~~i~v~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~  289 (314)
T TIGR02197       211 EQLRDFVYVKDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKL  289 (314)
T ss_pred             CceeeeEEHHHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHH
Confidence            6689999999999999999987 5567999988 46999999999999985321 11111111     223457899999


Q ss_pred             hh-cCCcccccHHHHHHHHHHHHH
Q 019415          312 EE-KGFEYNYDLKMILDDSIKCGR  334 (341)
Q Consensus       312 ~~-lg~~~~~~~~~~l~~~~~~~~  334 (341)
                      ++ |||+|+++++++++++++|++
T Consensus       290 ~~~l~~~p~~~l~~~l~~~~~~~~  313 (314)
T TIGR02197       290 RAAGYYGPFTTLEEGVKDYVQWLL  313 (314)
T ss_pred             HHhcCCCCcccHHHHHHHHHHHHh
Confidence            88 899999999999999999985

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=1.2e-37  Score=272.61  Aligned_cols=248  Identities=26%  Similarity=0.378  Sum_probs=189.9

Q ss_pred             EEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEec
Q 019415           10 CVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVA   87 (341)
Q Consensus        10 lI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~a   87 (341)
                      |||||+||||++|+++|+++|  ++|++++| .... .....+...    +...++.+|++|++++.++++++|+|||+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~-~~~~-~~~~~~~~~----~~~~~~~~Di~d~~~l~~a~~g~d~V~H~A   74 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDR-SPPP-KFLKDLQKS----GVKEYIQGDITDPESLEEALEGVDVVFHTA   74 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccc-cccc-ccchhhhcc----cceeEEEeccccHHHHHHHhcCCceEEEeC
Confidence            799999999999999999999  79999988 6543 111112111    233499999999999999999999999999


Q ss_pred             cCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCC--CCCCCCCCCCCCccCc
Q 019415           88 TPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI--DETCYTPPDHPLTCHN  165 (341)
Q Consensus        88 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~--~E~~~~~~~~~~~~~~  165 (341)
                      ++.......+.+.++++|+.||++++++|++.+ +++|||+||.+++.+... +    ...+  +|..+.+        .
T Consensus        75 a~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~-~----~~~~~~dE~~~~~--------~  140 (280)
T PF01073_consen   75 APVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYK-G----DPIINGDEDTPYP--------S  140 (280)
T ss_pred             ccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccC-C----CCcccCCcCCccc--------c
Confidence            987765545566899999999999999999998 999999999997664211 1    2222  3443222        2


Q ss_pred             chhhhHHHhHHHHHHHHHhhcc------CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhh
Q 019415          166 EYLRVYIESKMKSEKELLSYGS------SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEE  237 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~~------~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  237 (341)
                      .+...|+.||.++|+++++...      ..+.+++|||+.||||++...      .+.+......+.  ...+.+.    
T Consensus       141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~------~~~~~~~~~~g~~~~~~g~~~----  210 (280)
T PF01073_consen  141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRL------VPRLVKMVRSGLFLFQIGDGN----  210 (280)
T ss_pred             cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccc------cchhhHHHHhcccceeecCCC----
Confidence            3568999999999999998764      249999999999999987765      444444444442  3333333    


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcC-------CCCCc-eEEEecc-ccC-HHHHHHHHHHhCCC
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEK-------PSMSG-RFFCTNV-FVS-SAEIASCLQQNYPE  289 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~-------~~~~g-~~n~~~~-~~s-~~e~~~~i~~~~~~  289 (341)
                        ...+++||+|+|.+++.+++.       ....| .|+|+++ ++. +.|++..+.+.++.
T Consensus       211 --~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~  270 (280)
T PF01073_consen  211 --NLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGY  270 (280)
T ss_pred             --ceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCC
Confidence              389999999999999887643       23445 9999985 577 99999999999853

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.2e-36  Score=270.16  Aligned_cols=286  Identities=23%  Similarity=0.378  Sum_probs=211.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++||||||+||||+++++.|+++||+|++++| +.........+..+.....+++++.+|++|.+.+.+++.++|.|+
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R-~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~   83 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQ-KNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF   83 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEc-CchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence            4678999999999999999999999999999999 654322222233332223468899999999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCC-C-CCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPL-K-EDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~-~-~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |+++...... ...+.++++|+.++.+++++|.+...+++||++||..+++.. . ...    ..+++|++|.+....  
T Consensus        84 ~~~~~~~~~~-~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~----~~~~~E~~~~~~~~~--  156 (297)
T PLN02583         84 CCFDPPSDYP-SYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNIST----QKDVDERSWSDQNFC--  156 (297)
T ss_pred             EeCccCCccc-ccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCC----CCCCCcccCCCHHHH--
Confidence            9886544322 224588999999999999999886338999999998765321 1 111    346778765433111  


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK  241 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (341)
                        ..+...|+.||..+|++++.+. +.+++++++||++||||.....      ..    .+.........        +.
T Consensus       157 --~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~------~~----~~~~~~~~~~~--------~~  216 (297)
T PLN02583        157 --RKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQH------NP----YLKGAAQMYEN--------GV  216 (297)
T ss_pred             --hhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCc------hh----hhcCCcccCcc--------cC
Confidence              0112379999999999999987 5699999999999999976433      11    11111111111        26


Q ss_pred             CCcccHHHHHHHHHHhhcCCCCCceEEEeccccC-HHHHHHHHHHhCCCCccccCcC--CCCcceEeecchhhhhcCCcc
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVS-SAEIASCLQQNYPEFHIKQEYL--DVPKREIKWGGTKLEEKGFEY  318 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s-~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~~  318 (341)
                      ++||||+|+|++++.+++.+...+.|+|+++..+ +.++++++.+.+|..+++....  ........++++|+++||+++
T Consensus       217 ~~~v~V~Dva~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~~~  296 (297)
T PLN02583        217 LVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEMQGSEVYQQRIRNKKLNKLMEDF  296 (297)
T ss_pred             cceEEHHHHHHHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCCcccccCCCccccccChHHHHHhCccc
Confidence            7899999999999999998887789999988765 6789999999999877765321  122355679999999999875

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=5.6e-37  Score=279.60  Aligned_cols=300  Identities=22%  Similarity=0.338  Sum_probs=212.5

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCC---CCCceEEEecCCCChHHHHHHhcCC
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPG---AETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      .++|+||||||+||||++|++.|+++|++|++++| +......+..+.....   ...+++++.+|++|++.+.++++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r-~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~  129 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVD-TQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC  129 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence            35689999999999999999999999999999888 7543222222211100   1135889999999999999999999


Q ss_pred             CEEEEeccCCccccc-hhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc-cccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHIDG-YLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL-CASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~-~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~-~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                      |+|||+|+....... .......+.|+.++.+++++|++..++++|||+||.. .+|+.....  .....++|+++....
T Consensus       130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~--~~~~~i~E~~~~~~~  207 (367)
T PLN02686        130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPH--DLPPVIDEESWSDES  207 (367)
T ss_pred             cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCC--CCCcccCCCCCCChh
Confidence            999999997654321 1123567889999999999999862399999999974 355421100  001346666543221


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhh
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEE  237 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (341)
                      .    ...+.++|+.||..+|++++.++ +.|++++++||++||||+....  .+.   .+...+.+....+++      
T Consensus       208 ~----~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~--~~~---~~~~~~~g~~~~~g~------  272 (367)
T PLN02686        208 F----CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRR--NST---ATIAYLKGAQEMLAD------  272 (367)
T ss_pred             h----cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCC--CCh---hHHHHhcCCCccCCC------
Confidence            1    12345789999999999999987 6699999999999999975432  111   122222222122222      


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcCC---CCCceEEEeccccCHHHHHHHHHHhCCCCccccCc---C-CCCcceEeecchh
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEKP---SMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY---L-DVPKREIKWGGTK  310 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~~---~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~---~-~~~~~~~~~d~~k  310 (341)
                        +.++|+||+|+|++++.+++..   ...++|++++..+++.|+++.+.+.++. +.....   . ++....+.+|++|
T Consensus       273 --g~~~~v~V~Dva~A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~d~~~~~~d~~k  349 (367)
T PLN02686        273 --GLLATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGL-PINKIAGNSSSDDTPARFELSNKK  349 (367)
T ss_pred             --CCcCeEEHHHHHHHHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCC-CCCcCCCchhhcCCcccccccHHH
Confidence              2567999999999999999752   3345885555679999999999999852 222221   2 4567788999999


Q ss_pred             hhh-cCCcccccHHH
Q 019415          311 LEE-KGFEYNYDLKM  324 (341)
Q Consensus       311 ~~~-lg~~~~~~~~~  324 (341)
                      +++ |||.|++.+++
T Consensus       350 l~~~l~~~~~~~~~~  364 (367)
T PLN02686        350 LSRLMSRTRRCCYDE  364 (367)
T ss_pred             HHHHHHHhhhccccc
Confidence            988 99999866654

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=3.1e-36  Score=266.82  Aligned_cols=267  Identities=16%  Similarity=0.114  Sum_probs=206.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi~   85 (341)
                      ||||+|||||||+++++.|++.|++|++++| +                       .+|+.+++.+.+++++  +|+|||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r-~-----------------------~~d~~~~~~~~~~~~~~~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTS-S-----------------------QLDLTDPEALERLLRAIRPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCC-c-----------------------ccCCCCHHHHHHHHHhCCCCEEEE
Confidence            5899999999999999999999999999888 2                       4789999999999986  499999


Q ss_pred             eccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           86 VATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        86 ~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      +|+...... ....+..++.|+.++.+++++|.+.+ . +||++||.+ +|+...      ..+++|++..         
T Consensus        57 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~-vy~~~~------~~~~~E~~~~---------  118 (287)
T TIGR01214        57 TAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDY-VFDGEG------KRPYREDDAT---------  118 (287)
T ss_pred             CCccccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeee-eecCCC------CCCCCCCCCC---------
Confidence            999765432 22244788999999999999999987 4 899999988 443322      4578887632         


Q ss_pred             cchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCc
Q 019415          165 NEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL  244 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (341)
                       .+.+.|+.+|..+|+.++.+   +++++++||+.+||+.....     +...++..+..+......+++      .+++
T Consensus       119 -~~~~~Y~~~K~~~E~~~~~~---~~~~~ilR~~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------~~~~  183 (287)
T TIGR01214       119 -NPLNVYGQSKLAGEQAIRAA---GPNALIVRTSWLYGGGGGRN-----FVRTMLRLAGRGEELRVVDDQ------IGSP  183 (287)
T ss_pred             -CCcchhhHHHHHHHHHHHHh---CCCeEEEEeeecccCCCCCC-----HHHHHHHHhhcCCCceEecCC------CcCC
Confidence             34678999999999999865   57999999999999974322     344555555444322222222      7899


Q ss_pred             ccHHHHHHHHHHhhcCC-CCCceEEEec-cccCHHHHHHHHHHhCCCCcccc-------------CcCCCCcceEeecch
Q 019415          245 VHIDDVCEAHIFCMEKP-SMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQ-------------EYLDVPKREIKWGGT  309 (341)
Q Consensus       245 i~v~D~a~~~~~~~~~~-~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~-------------~~~~~~~~~~~~d~~  309 (341)
                      +|++|+|+++..++... ...++||+++ +.+|+.|+++.+++.++......             ...........+|++
T Consensus       184 v~v~Dva~a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  263 (287)
T TIGR01214       184 TYAKDLARVIAALLQRLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNT  263 (287)
T ss_pred             cCHHHHHHHHHHHHhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchH
Confidence            99999999999999876 3567999987 56999999999999986432110             011123355689999


Q ss_pred             hhhh-cCCcccccHHHHHHHHHHH
Q 019415          310 KLEE-KGFEYNYDLKMILDDSIKC  332 (341)
Q Consensus       310 k~~~-lg~~~~~~~~~~l~~~~~~  332 (341)
                      |+++ |||.+. +++++|.++++.
T Consensus       264 ~~~~~lg~~~~-~~~~~l~~~~~~  286 (287)
T TIGR01214       264 KLVKTLGTPLP-HWREALRAYLQE  286 (287)
T ss_pred             HHHHHcCCCCc-cHHHHHHHHHhh
Confidence            9998 999554 999999998864

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=2.9e-37  Score=271.75  Aligned_cols=268  Identities=21%  Similarity=0.185  Sum_probs=196.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      ||||||||+|+||++|.+.|.+.|++|+++.| .                       ..|++|.+.+.+.++  ++|+||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r-~-----------------------~~dl~d~~~~~~~~~~~~pd~Vi   56 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSR-S-----------------------DLDLTDPEAVAKLLEAFKPDVVI   56 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEEST-T-----------------------CS-TTSHHHHHHHHHHH--SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCc-h-----------------------hcCCCCHHHHHHHHHHhCCCeEe
Confidence            89999999999999999999999999999878 2                       688999999999987  599999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||||...... +..++..+++|+.++.+++++|.+.+  .++||+||..++.|. .      ..+++|++.         
T Consensus        57 n~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~-~------~~~y~E~d~---------  118 (286)
T PF04321_consen   57 NCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGD-K------GGPYTEDDP---------  118 (286)
T ss_dssp             E------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SS-T------SSSB-TTS----------
T ss_pred             ccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCC-c------ccccccCCC---------
Confidence            9999887655 44566899999999999999999998  699999999965543 2      467899883         


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                       ..|.+.||.+|.++|+.++...   -+.+|+|++.+||+..      +.++.+++..+..+.......++      .++
T Consensus       119 -~~P~~~YG~~K~~~E~~v~~~~---~~~~IlR~~~~~g~~~------~~~~~~~~~~~~~~~~i~~~~d~------~~~  182 (286)
T PF04321_consen  119 -PNPLNVYGRSKLEGEQAVRAAC---PNALILRTSWVYGPSG------RNFLRWLLRRLRQGEPIKLFDDQ------YRS  182 (286)
T ss_dssp             ----SSHHHHHHHHHHHHHHHH----SSEEEEEE-SEESSSS------SSHHHHHHHHHHCTSEEEEESSC------EE-
T ss_pred             -CCCCCHHHHHHHHHHHHHHHhc---CCEEEEecceecccCC------CchhhhHHHHHhcCCeeEeeCCc------eeC
Confidence             3558999999999999999754   4899999999999932      24688888888777755444444      789


Q ss_pred             cccHHHHHHHHHHhhcCCCC----CceEEEec-cccCHHHHHHHHHHhCCCCc---ccc--C---cCCCCcceEeecchh
Q 019415          244 LVHIDDVCEAHIFCMEKPSM----SGRFFCTN-VFVSSAEIASCLQQNYPEFH---IKQ--E---YLDVPKREIKWGGTK  310 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~~----~g~~n~~~-~~~s~~e~~~~i~~~~~~~~---~~~--~---~~~~~~~~~~~d~~k  310 (341)
                      ++|+.|+|+++..++++...    .|+||+++ +.+|+.|++..+++.++...   .+.  .   .....+.+..+|++|
T Consensus       183 p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~k  262 (286)
T PF04321_consen  183 PTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRK  262 (286)
T ss_dssp             -EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HH
T ss_pred             CEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHH
Confidence            99999999999999986432    58999988 56999999999999884222   111  1   112367788999999


Q ss_pred             hhh-cCCcccccHHHHHHHHHHHH
Q 019415          311 LEE-KGFEYNYDLKMILDDSIKCG  333 (341)
Q Consensus       311 ~~~-lg~~~~~~~~~~l~~~~~~~  333 (341)
                      +++ ||++++ +|+++|+++++.+
T Consensus       263 l~~~~g~~~~-~~~~~l~~~~~~~  285 (286)
T PF04321_consen  263 LKNLLGIKPP-PWREGLEELVKQY  285 (286)
T ss_dssp             HHHCTTS----BHHHHHHHHHHHH
T ss_pred             HHHccCCCCc-CHHHHHHHHHHHh
Confidence            998 899998 9999999999865

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=1.2e-35  Score=267.96  Aligned_cols=306  Identities=20%  Similarity=0.196  Sum_probs=221.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi~   85 (341)
                      |||||||+|+||+++++.|+++|++|+++.| .....  ...+..... ..+++++.+|+.+++.+.++++  ++|+|||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~-~~~~~--~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~   76 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDN-LSNGS--PEALKRGER-ITRVTFVEGDLRDRELLDRLFEEHKIDAVIH   76 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeC-CCccc--hhhhhhhcc-ccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence            5899999999999999999999999998766 33221  111111111 1257889999999999999986  6999999


Q ss_pred             eccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           86 VATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        86 ~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      +|+...... .......++.|+.++.+++++|.+.+ +++||++||.. +|+...      ..+++|++..         
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~-~~g~~~------~~~~~e~~~~---------  139 (328)
T TIGR01179        77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAA-VYGEPS------SIPISEDSPL---------  139 (328)
T ss_pred             CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchh-hcCCCC------CCCccccCCC---------
Confidence            999764432 22334778999999999999999988 89999999987 454332      3467777632         


Q ss_pred             cchhhhHHHhHHHHHHHHHhhc-c-CCceEEEEecCceeCCCCCCC-----CCCCchhhhhHhhHhcCc---cccccccc
Q 019415          165 NEYLRVYIESKMKSEKELLSYG-S-SGLEVVALALGVVAGDTNLPY-----SSTPVSVIGGLCQLTNNE---YVYQTLRD  234 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~-~-~~~~~~vlRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~  234 (341)
                       .+.+.|+.+|..+|.+++.++ + .+++++++||+.+||+.....     .....++..+.....+..   ..++..-.
T Consensus       140 -~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (328)
T TIGR01179       140 -GPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYP  218 (328)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCccc
Confidence             246789999999999999987 4 689999999999999864321     001223444444443222   11111111


Q ss_pred             hhhccCCCCcccHHHHHHHHHHhhcCC---CCCceEEEec-cccCHHHHHHHHHHhCCCCccccCcC---CCCcceEeec
Q 019415          235 TEEILGKLPLVHIDDVCEAHIFCMEKP---SMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEYL---DVPKREIKWG  307 (341)
Q Consensus       235 ~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d  307 (341)
                      .+++.+.++|||++|+++++..+++..   ...++||+++ ..+|+.|+++.+++.++. +.+....   .........|
T Consensus       219 ~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~  297 (328)
T TIGR01179       219 TPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGV-DFPVELAPRRPGDPASLVAD  297 (328)
T ss_pred             CCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCC-CcceEeCCCCCccccchhcc
Confidence            123344789999999999999998752   2345999987 569999999999999853 3333221   1233355679


Q ss_pred             chhhhh-cCCccccc-HHHHHHHHHHHHHHc
Q 019415          308 GTKLEE-KGFEYNYD-LKMILDDSIKCGRKS  336 (341)
Q Consensus       308 ~~k~~~-lg~~~~~~-~~~~l~~~~~~~~~~  336 (341)
                      ++++++ |||+|.++ ++++++++++|++++
T Consensus       298 ~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~  328 (328)
T TIGR01179       298 ASKIRRELGWQPKYTDLEIIIKTAWRWESRN  328 (328)
T ss_pred             hHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence            999987 99999998 999999999999764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.1e-35  Score=252.78  Aligned_cols=266  Identities=21%  Similarity=0.156  Sum_probs=221.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      |+|||||++|++|++|++.|. .+++|+.++| .                       ..|++|++.+.++++  ++|+||
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~-~-----------------------~~Ditd~~~v~~~i~~~~PDvVI   55 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDR-A-----------------------ELDITDPDAVLEVIRETRPDVVI   55 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccC-c-----------------------cccccChHHHHHHHHhhCCCEEE
Confidence            569999999999999999999 6699999888 1                       189999999999997  689999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... +...+..+.+|..++.+++++|.+.|  .++||+||..++.|..       ..++.|+|.+        
T Consensus        56 n~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~-------~~~Y~E~D~~--------  118 (281)
T COG1091          56 NAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEK-------GGPYKETDTP--------  118 (281)
T ss_pred             ECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCC-------CCCCCCCCCC--------
Confidence            9999988876 55567999999999999999999999  8899999999666543       3689999843        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                        .|.+.||+||+++|..++.+.   -+.+|+|.+++||....      .+...+++....+..+..-.+|      ..+
T Consensus       119 --~P~nvYG~sKl~GE~~v~~~~---~~~~I~Rtswv~g~~g~------nFv~tml~la~~~~~l~vv~Dq------~gs  181 (281)
T COG1091         119 --NPLNVYGRSKLAGEEAVRAAG---PRHLILRTSWVYGEYGN------NFVKTMLRLAKEGKELKVVDDQ------YGS  181 (281)
T ss_pred             --CChhhhhHHHHHHHHHHHHhC---CCEEEEEeeeeecCCCC------CHHHHHHHHhhcCCceEEECCe------eeC
Confidence              458999999999999999765   68999999999998653      3577888888777766666566      888


Q ss_pred             cccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCC-----ccccC-c--CCCCcceEeecchhhhh-
Q 019415          244 LVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEF-----HIKQE-Y--LDVPKREIKWGGTKLEE-  313 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~-----~~~~~-~--~~~~~~~~~~d~~k~~~-  313 (341)
                      .+++.|+|+++..++......|+||+++ +..||.|+++.|.+..+..     ++... +  .-..+.+..+|+.|+++ 
T Consensus       182 Pt~~~dlA~~i~~ll~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~  261 (281)
T COG1091         182 PTYTEDLADAILELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKA  261 (281)
T ss_pred             CccHHHHHHHHHHHHhccccCcEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHH
Confidence            9999999999999998877777999988 5689999999999987411     11111 1  12355667899999988 


Q ss_pred             cCCcccccHHHHHHHHHHH
Q 019415          314 KGFEYNYDLKMILDDSIKC  332 (341)
Q Consensus       314 lg~~~~~~~~~~l~~~~~~  332 (341)
                      +|+.+. +|+++++.+++.
T Consensus       262 ~g~~~~-~w~~~l~~~~~~  279 (281)
T COG1091         262 FGLSLP-EWREALKALLDE  279 (281)
T ss_pred             hCCCCc-cHHHHHHHHHhh
Confidence            899888 999999999864

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=1.9e-35  Score=265.43  Aligned_cols=271  Identities=17%  Similarity=0.174  Sum_probs=204.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++|+||||||+||||++|++.|+++|  ++|++++| +....   ..+..... ..++.++.+|++|++.+.++++++|+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r-~~~~~---~~~~~~~~-~~~~~~v~~Dl~d~~~l~~~~~~iD~   77 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSR-DELKQ---WEMQQKFP-APCLRFFIGDVRDKERLTRALRGVDY   77 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcC-ChhHH---HHHHHHhC-CCcEEEEEccCCCHHHHHHHHhcCCE
Confidence            35899999999999999999999986  78999988 64331   11111111 13688999999999999999999999


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |||+||...... .......+++|+.++.+++++|.+.+ +++|||+||....                           
T Consensus        78 Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~~---------------------------  129 (324)
T TIGR03589        78 VVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKAA---------------------------  129 (324)
T ss_pred             EEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCC---------------------------
Confidence            999999754322 22234789999999999999999988 8999999996421                           


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccch
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDT  235 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  235 (341)
                          .|.++|+.+|..+|.+++.++    +.|++++++||++|||++..       +++.+.+.+..+.  ..+.++.  
T Consensus       130 ----~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-------~i~~~~~~~~~~~~~~~i~~~~--  196 (324)
T TIGR03589       130 ----NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-------VVPFFKSLKEEGVTELPITDPR--  196 (324)
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-------cHHHHHHHHHhCCCCeeeCCCC--
Confidence                124679999999999997753    45899999999999998532       3566666554443  2222333  


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcCCCC-cceEeecchhhhh-
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVP-KREIKWGGTKLEE-  313 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~~~~~~d~~k~~~-  313 (341)
                          +.++|+|++|++++++.++++.....+|+.++..+++.|+++.+.+..+....+.  .++. .....+|++++++ 
T Consensus       197 ----~~r~~i~v~D~a~a~~~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~  270 (324)
T TIGR03589       197 ----MTRFWITLEQGVNFVLKSLERMLGGEIFVPKIPSMKITDLAEAMAPECPHKIVGI--RPGEKLHEVMITEDDARHT  270 (324)
T ss_pred             ----ceEeeEEHHHHHHHHHHHHhhCCCCCEEccCCCcEEHHHHHHHHHhhCCeeEeCC--CCCchhHhhhcChhhhhhh
Confidence                3899999999999999999864333477544456999999999999763221222  1222 2345689999987 


Q ss_pred             cCCcccccHHHHHH
Q 019415          314 KGFEYNYDLKMILD  327 (341)
Q Consensus       314 lg~~~~~~~~~~l~  327 (341)
                      |||+|++++++++.
T Consensus       271 lg~~~~~~l~~~~~  284 (324)
T TIGR03589       271 YELGDYYAILPSIS  284 (324)
T ss_pred             cCCCCeEEEccccc
Confidence            99999999999886

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=6.8e-35  Score=267.49  Aligned_cols=278  Identities=17%  Similarity=0.160  Sum_probs=202.5

Q ss_pred             CCcEEEEe----cCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-----HhhhCCCCCCceEEEecCCCChHHHHH
Q 019415            5 SNFKVCVT----GGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-----LLKSLPGAETRLIFFEAEIYDPDTFEN   75 (341)
Q Consensus         5 ~~~~ilI~----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~   75 (341)
                      ++|+||||    |||||||++|++.|+++||+|++++| +........     .+..+.  ..+++++.+|+.|   +.+
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTR-GKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKS  124 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEec-CCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHh
Confidence            35789999    99999999999999999999999999 654311110     011111  1368899999977   444


Q ss_pred             Hh--cCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           76 AI--QGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        76 ~~--~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                      ++  .++|+|||+++.               +..++.+++++|++.+ +++|||+||.+ +|+...      ..+..|.+
T Consensus       125 ~~~~~~~d~Vi~~~~~---------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~-vyg~~~------~~p~~E~~  181 (378)
T PLN00016        125 KVAGAGFDVVYDNNGK---------------DLDEVEPVADWAKSPG-LKQFLFCSSAG-VYKKSD------EPPHVEGD  181 (378)
T ss_pred             hhccCCccEEEeCCCC---------------CHHHHHHHHHHHHHcC-CCEEEEEccHh-hcCCCC------CCCCCCCC
Confidence            44  479999999652               1346789999999998 99999999998 454332      34556654


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc--ccc
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV--YQT  231 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  231 (341)
                      ...+             +. +|..+|.+++.   .+++++++||+++||+.....     ...+++..+..+...  .+.
T Consensus       182 ~~~p-------------~~-sK~~~E~~l~~---~~l~~~ilRp~~vyG~~~~~~-----~~~~~~~~~~~~~~i~~~g~  239 (378)
T PLN00016        182 AVKP-------------KA-GHLEVEAYLQK---LGVNWTSFRPQYIYGPGNNKD-----CEEWFFDRLVRGRPVPIPGS  239 (378)
T ss_pred             cCCC-------------cc-hHHHHHHHHHH---cCCCeEEEeceeEECCCCCCc-----hHHHHHHHHHcCCceeecCC
Confidence            2211             22 89999998864   479999999999999975432     334455555444322  233


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCCC-CceEEEecc-ccCHHHHHHHHHHhCCCCccccC-cC-----------
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM-SGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQE-YL-----------  297 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~-~~-----------  297 (341)
                      +.+      .++|+|++|+|+++..+++++.. +++||++++ .+|+.|+++.+++.++... .+. ..           
T Consensus       240 g~~------~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~-~i~~~~~~~~~~~~~~~  312 (378)
T PLN00016        240 GIQ------LTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPE-EIVHYDPKAVGFGAKKA  312 (378)
T ss_pred             CCe------eeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCC-ceeecCccccCcccccc
Confidence            333      89999999999999999987654 459999885 5999999999999885321 111 00           


Q ss_pred             -CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcCCCC
Q 019415          298 -DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSGYLP  340 (341)
Q Consensus       298 -~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~~~  340 (341)
                       +........|++|+++ |||+|+++++++|+++++|++..|.++
T Consensus       313 ~p~~~~~~~~d~~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~~  357 (378)
T PLN00016        313 FPFRDQHFFASPRKAKEELGWTPKFDLVEDLKDRYELYFGRGRDR  357 (378)
T ss_pred             ccccccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCc
Confidence             1122344579999988 999999999999999999999998764

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=9.6e-34  Score=249.21  Aligned_cols=302  Identities=22%  Similarity=0.220  Sum_probs=224.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++.+||||||+||+|+||+++|++++  .+|++++. .+....-.......  ....+.++.+|+++...+.++++++ .
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~-~~~~~~~~~e~~~~--~~~~v~~~~~D~~~~~~i~~a~~~~-~   78 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDK-TPTQSNLPAELTGF--RSGRVTVILGDLLDANSISNAFQGA-V   78 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEecc-Cccccccchhhhcc--cCCceeEEecchhhhhhhhhhccCc-e
Confidence            34789999999999999999999998  89999887 65421111111110  2358999999999999999999999 8


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |+|||+.....- ....+..+++|+.||.+++++|.+.+ ++++||+||+.++.+..+      ....+|+.+-+.    
T Consensus        79 Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~------~~n~~E~~p~p~----  147 (361)
T KOG1430|consen   79 VVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEP------IINGDESLPYPL----  147 (361)
T ss_pred             EEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCee------cccCCCCCCCcc----
Confidence            888888655443 33466899999999999999999999 999999999998875443      233455543332    


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccC
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG  240 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (341)
                          .+...|+.||..+|++++..+ ..++..++|||+.||||++...      .+.+...+..+...+..++    +..
T Consensus       148 ----~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~------~~~i~~~~~~g~~~f~~g~----~~~  213 (361)
T KOG1430|consen  148 ----KHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRL------LPKIVEALKNGGFLFKIGD----GEN  213 (361)
T ss_pred             ----ccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccc------cHHHHHHHHccCceEEeec----ccc
Confidence                234789999999999999988 5589999999999999998876      6667777666653322221    233


Q ss_pred             CCCcccHHHHHHHHHHhhc-----CCCCCc-eEEEecc-ccCHHHHHHHHHHhCCCCccc--cCcC--------------
Q 019415          241 KLPLVHIDDVCEAHIFCME-----KPSMSG-RFFCTNV-FVSSAEIASCLQQNYPEFHIK--QEYL--------------  297 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~-----~~~~~g-~~n~~~~-~~s~~e~~~~i~~~~~~~~~~--~~~~--------------  297 (341)
                      ..++++++.|+.+++.+..     .+..+| .|+|+++ ++...+++..+.+.++. ..|  +..+              
T Consensus       214 ~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~-~~~~~~~~p~~l~~~~~~l~e~~  292 (361)
T KOG1430|consen  214 LNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGY-CLPSSIKLPLFLSYFLAYLLEIV  292 (361)
T ss_pred             ccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCC-CCCceeecchHHHHHHHHHHHHH
Confidence            8899999999998877543     234566 8999985 45555555577777631 111  1000              


Q ss_pred             ----------------CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          298 ----------------DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       298 ----------------~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                                      ........++..|+++ |||.|..++++++.+++.|+...
T Consensus       293 ~~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~  348 (361)
T KOG1430|consen  293 YFLLRPYQPILTRFRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASE  348 (361)
T ss_pred             HHhccCCCCCcChhheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhh
Confidence                            0123455788999987 99999999999999999988654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=5.5e-34  Score=245.11  Aligned_cols=229  Identities=24%  Similarity=0.307  Sum_probs=184.3

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC--CEEEEe
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC--DFVFHV   86 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~Vi~~   86 (341)
                      |||+|||||||++|+++|+++|++|+.+.| +..........       .+++++.+|+.+.+.+.+++++.  |+|||+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~-~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~   72 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSR-SSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKANIDVVIHL   72 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEES-CSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHHTESEEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccc-ccccccccccc-------ceEEEEEeeccccccccccccccCceEEEEe
Confidence            799999999999999999999999999998 65542111111       17889999999999999999865  999999


Q ss_pred             ccCCccc-cchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           87 ATPLQHI-DGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        87 a~~~~~~-~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      |+..... ........++.|+.++.+++++|.+.+ +++|||+||+. +|+...      ..+++|+++.          
T Consensus        73 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~-~y~~~~------~~~~~e~~~~----------  134 (236)
T PF01370_consen   73 AAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSAS-VYGDPD------GEPIDEDSPI----------  134 (236)
T ss_dssp             BSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGG-GGTSSS------SSSBETTSGC----------
T ss_pred             ecccccccccccccccccccccccccccccccccc-ccccccccccc-cccccc------cccccccccc----------
Confidence            9986421 133456889999999999999999999 79999999987 555543      5677888732          


Q ss_pred             chhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhccCCC
Q 019415          166 EYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEILGKL  242 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  242 (341)
                      .+.+.|+.+|..+|++++.+. +++++++++||+.+||+. ........++..++..+..+.  ..++++.+      .+
T Consensus       135 ~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  207 (236)
T PF01370_consen  135 NPLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG-NPNNNSSSFLPSLIRQALKGKPIKIPGDGSQ------VR  207 (236)
T ss_dssp             CHSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT-SSSSSTSSHHHHHHHHHHTTSSEEEESTSSC------EE
T ss_pred             cccccccccccccccccccccccccccccccccccccccc-ccccccccccchhhHHhhcCCcccccCCCCC------cc
Confidence            457889999999999999998 569999999999999998 221113346777777776655  34455555      99


Q ss_pred             CcccHHHHHHHHHHhhcCCC-CCceEEEe
Q 019415          243 PLVHIDDVCEAHIFCMEKPS-MSGRFFCT  270 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~-~~g~~n~~  270 (341)
                      +++|++|+|++++.+++++. ..++||++
T Consensus       208 ~~i~v~D~a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  208 DFIHVDDLAEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             EEEEHHHHHHHHHHHHHHSCTTTEEEEES
T ss_pred             ceEEHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999999999999999988 56699985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=6.3e-33  Score=248.73  Aligned_cols=265  Identities=15%  Similarity=0.141  Sum_probs=192.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+|||||||||||++|++.|+++||+|++++| +.++   ...+..     .+++++.+|++|++.+.++++++|+|||+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R-~~~~---~~~l~~-----~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~   71 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVR-NLRK---ASFLKE-----WGAELVYGDLSLPETLPPSFKGVTAIIDA   71 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-ChHH---hhhHhh-----cCCEEEECCCCCHHHHHHHHCCCCEEEEC
Confidence            68999999999999999999999999999999 6532   111111     37899999999999999999999999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNE  166 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  166 (341)
                      ++....    ....+.++|+.++.+++++|++.+ +++|||+||.++ ..                             .
T Consensus        72 ~~~~~~----~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~-~~-----------------------------~  116 (317)
T CHL00194         72 STSRPS----DLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNA-EQ-----------------------------Y  116 (317)
T ss_pred             CCCCCC----CccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccccc-cc-----------------------------c
Confidence            864321    123678889999999999999999 999999999642 10                             0


Q ss_pred             hhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCccc
Q 019415          167 YLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH  246 (341)
Q Consensus       167 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (341)
                      +.++|..+|..+|+.++.   ++++++++||+.+|+.....         .....+..........      .+.++|||
T Consensus       117 ~~~~~~~~K~~~e~~l~~---~~l~~tilRp~~~~~~~~~~---------~~~~~~~~~~~~~~~~------~~~~~~i~  178 (317)
T CHL00194        117 PYIPLMKLKSDIEQKLKK---SGIPYTIFRLAGFFQGLISQ---------YAIPILEKQPIWITNE------STPISYID  178 (317)
T ss_pred             CCChHHHHHHHHHHHHHH---cCCCeEEEeecHHhhhhhhh---------hhhhhccCCceEecCC------CCccCccC
Confidence            124688999999998874   57999999999888642110         0111111222222222      23889999


Q ss_pred             HHHHHHHHHHhhcCCCCC-ceEEEecc-ccCHHHHHHHHHHhCCCC----ccccCcC-----------------------
Q 019415          247 IDDVCEAHIFCMEKPSMS-GRFFCTNV-FVSSAEIASCLQQNYPEF----HIKQEYL-----------------------  297 (341)
Q Consensus       247 v~D~a~~~~~~~~~~~~~-g~~n~~~~-~~s~~e~~~~i~~~~~~~----~~~~~~~-----------------------  297 (341)
                      ++|+|+++..++..+... ++||++++ .+|+.|+++.+.+..+..    .+|....                       
T Consensus       179 v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~  258 (317)
T CHL00194        179 TQDAAKFCLKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFV  258 (317)
T ss_pred             HHHHHHHHHHHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHH
Confidence            999999999999876544 49999884 699999999999987531    1111100                       


Q ss_pred             --CCCcceEeecchhhhh-cCCccc--ccHHHHHHHHHHHH
Q 019415          298 --DVPKREIKWGGTKLEE-KGFEYN--YDLKMILDDSIKCG  333 (341)
Q Consensus       298 --~~~~~~~~~d~~k~~~-lg~~~~--~~~~~~l~~~~~~~  333 (341)
                        .....+...+.+++++ ||+.|.  .++++++++.+...
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  299 (317)
T CHL00194        259 EILNTSNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERI  299 (317)
T ss_pred             HHHhcCCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHH
Confidence              0022334455667776 999983  47888888777544

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-32  Score=267.27  Aligned_cols=249  Identities=22%  Similarity=0.217  Sum_probs=190.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+||||||+||||+++++.|+++|++|++++| +...     .      ...++.++.+|++|.+.+.++++++|+|||+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R-~~~~-----~------~~~~v~~v~gDL~D~~~l~~al~~vD~VVHl   68 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIAR-HRPD-----S------WPSSADFIAADIRDATAVESAMTGADVVAHC   68 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEEC-Cchh-----h------cccCceEEEeeCCCHHHHHHHHhCCCEEEEC
Confidence            68999999999999999999999999999999 6422     0      1126789999999999999999999999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNE  166 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  166 (341)
                      |+....        .+++|+.++.+++++|++.+ +++|||+||..                                  
T Consensus        69 Aa~~~~--------~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~----------------------------------  105 (854)
T PRK05865         69 AWVRGR--------NDHINIDGTANVLKAMAETG-TGRIVFTSSGH----------------------------------  105 (854)
T ss_pred             CCcccc--------hHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH----------------------------------
Confidence            986432        46789999999999999998 89999999831                                  


Q ss_pred             hhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCccc
Q 019415          167 YLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH  246 (341)
Q Consensus       167 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (341)
                              |..+|+++..   ++++++++||+++||++..      .++    ..+... ..+..+.    +...++|||
T Consensus       106 --------K~aaE~ll~~---~gl~~vILRp~~VYGP~~~------~~i----~~ll~~-~v~~~G~----~~~~~dfIh  159 (854)
T PRK05865        106 --------QPRVEQMLAD---CGLEWVAVRCALIFGRNVD------NWV----QRLFAL-PVLPAGY----ADRVVQVVH  159 (854)
T ss_pred             --------HHHHHHHHHH---cCCCEEEEEeceEeCCChH------HHH----HHHhcC-ceeccCC----CCceEeeee
Confidence                    6778887763   4799999999999999521      122    222211 1121111    122679999


Q ss_pred             HHHHHHHHHHhhcCCC-CCceEEEecc-ccCHHHHHHHHHHhCCCCc--cccCcC-----CCCcceEeecchhhhh-cCC
Q 019415          247 IDDVCEAHIFCMEKPS-MSGRFFCTNV-FVSSAEIASCLQQNYPEFH--IKQEYL-----DVPKREIKWGGTKLEE-KGF  316 (341)
Q Consensus       247 v~D~a~~~~~~~~~~~-~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~--~~~~~~-----~~~~~~~~~d~~k~~~-lg~  316 (341)
                      ++|+|+++..+++... ..++||++++ .+|+.|+++.+.+......  ......     ........+|++|+++ |||
T Consensus       160 VdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw  239 (854)
T PRK05865        160 SDDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGF  239 (854)
T ss_pred             HHHHHHHHHHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCC
Confidence            9999999999986543 4569999885 5999999999987531111  111000     1111244689999987 999


Q ss_pred             cccccHHHHHHHHHHHHHHc
Q 019415          317 EYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       317 ~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +|+++++++|+++++|++..
T Consensus       240 ~P~~sLeeGL~dti~~~r~r  259 (854)
T PRK05865        240 QPAWNAEECLEDFTLAVRGR  259 (854)
T ss_pred             CCCCCHHHHHHHHHHHHHhh
Confidence            99999999999999999875

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=1.2e-32  Score=244.35  Aligned_cols=273  Identities=20%  Similarity=0.172  Sum_probs=188.6

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEecc
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVAT   88 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~a~   88 (341)
                      ||||||+||||+++++.|+++|++|++++| +........          ...  ..|+.. ..+...+.++|+|||+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----------~~~--~~~~~~-~~~~~~~~~~D~Vvh~a~   66 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTR-SPPAGANTK----------WEG--YKPWAP-LAESEALEGADAVINLAG   66 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeC-CCCCCCccc----------cee--eecccc-cchhhhcCCCCEEEECCC
Confidence            699999999999999999999999999999 765421110          001  112222 345567789999999999


Q ss_pred             CCccc---cchhHhHhhhhhhhHHHHHHHHHHhcCCcC--EEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           89 PLQHI---DGYLYKNVVEACVGAAKKIASFCVKSGTVK--RLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        89 ~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~--~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      .....   .....+.+++.|+.++.+++++|++.+ ++  .||+.||.. +|+...      ..+++|+++.        
T Consensus        67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~-~yg~~~------~~~~~E~~~~--------  130 (292)
T TIGR01777        67 EPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVG-YYGTSE------DRVFTEEDSP--------  130 (292)
T ss_pred             CCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEE-EeCCCC------CCCcCcccCC--------
Confidence            75432   122345788999999999999999998 63  466666655 554433      4567777622        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC-ccccccccchhhccCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN-EYVYQTLRDTEEILGKL  242 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  242 (341)
                        .+.+.|+..+...|..+..+.+.+++++++||+.+||+....       ...+....... ...++      ++.+.+
T Consensus       131 --~~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~-------~~~~~~~~~~~~~~~~g------~~~~~~  195 (292)
T TIGR01777       131 --AGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGA-------LAKMLPPFRLGLGGPLG------SGRQWF  195 (292)
T ss_pred             --CCCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcch-------hHHHHHHHhcCcccccC------CCCccc
Confidence              123456666777777766544568999999999999996421       22222211111 11122      334489


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCC---ccccCcC--------CCCcceEeecchh
Q 019415          243 PLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEF---HIKQEYL--------DVPKREIKWGGTK  310 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~---~~~~~~~--------~~~~~~~~~d~~k  310 (341)
                      ++||++|+|+++..+++++...++||+++ +.+|+.|+++.+++.++..   .+|....        .....+.+++++|
T Consensus       196 ~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  275 (292)
T TIGR01777       196 SWIHIEDLVQLILFALENASISGPVNATAPEPVRNKEFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEK  275 (292)
T ss_pred             ccEeHHHHHHHHHHHhcCcccCCceEecCCCccCHHHHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHH
Confidence            99999999999999998876678999987 5699999999999998531   1222110        1123466788999


Q ss_pred             hhhcCCccccc-HHHHH
Q 019415          311 LEEKGFEYNYD-LKMIL  326 (341)
Q Consensus       311 ~~~lg~~~~~~-~~~~l  326 (341)
                      ++++||+|.++ ++|++
T Consensus       276 ~~~~g~~~~~~~~~~~~  292 (292)
T TIGR01777       276 LLEAGFQFQYPDLDEAL  292 (292)
T ss_pred             HHhcCCeeeCcChhhcC
Confidence            99999999996 88764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=7.1e-32  Score=253.41  Aligned_cols=267  Identities=16%  Similarity=0.165  Sum_probs=188.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC---CeEEEEecCCCCchhhhhHhh-h-------------CCC-----CCCceEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG---YIVHTTLRPNLEDKSKVDLLK-S-------------LPG-----AETRLIF   62 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-~-------------~~~-----~~~~~~~   62 (341)
                      ++++|||||||||||++|++.|+..+   .+|+++.| ........+++. .             .+.     ...++++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR-~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLR-ASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEe-CCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            56899999999999999999999864   36899999 654433332221 0             010     0258999


Q ss_pred             EecCCCC-------hHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccccccc
Q 019415           63 FEAEIYD-------PDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCAS  135 (341)
Q Consensus        63 ~~~Dl~~-------~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~  135 (341)
                      +.+|++.       .+.++.+++++|+|||+||......  +++..+++|+.++.+++++|++.+.+++|||+||+++++
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~--~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG  166 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDE--RYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCG  166 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcC--CHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEec
Confidence            9999984       4456778889999999999877642  356889999999999999999874489999999998554


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCC---------C---------------------------------CCccCcchhhhHHH
Q 019415          136 PLKEDGSAGYKDSIDETCYTPPD---------H---------------------------------PLTCHNEYLRVYIE  173 (341)
Q Consensus       136 ~~~~~~~~~~~~~~~E~~~~~~~---------~---------------------------------~~~~~~~~~~~Y~~  173 (341)
                      ...        ..+.|..+.+..         .                                 ..+....+.+.|+.
T Consensus       167 ~~~--------~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~  238 (491)
T PLN02996        167 EKS--------GLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVF  238 (491)
T ss_pred             CCC--------ceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHh
Confidence            321        122222211110         0                                 00001123478999


Q ss_pred             hHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhh------HhhHhcCc--cccccccchhhccCCCCcc
Q 019415          174 SKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGG------LCQLTNNE--YVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       174 sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~i  245 (341)
                      ||.++|+++..+.. +++++++||++|||++..+   .+.|+..+      +.....+.  ..++++.+      .+|+|
T Consensus       239 TK~~aE~lv~~~~~-~lpv~i~RP~~V~G~~~~p---~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~------~~D~v  308 (491)
T PLN02996        239 TKAMGEMLLGNFKE-NLPLVIIRPTMITSTYKEP---FPGWIEGLRTIDSVIVGYGKGKLTCFLADPNS------VLDVI  308 (491)
T ss_pred             hHHHHHHHHHHhcC-CCCEEEECCCEeccCCcCC---CCCcccchhhHHHHHHHhccceEeEEecCCCe------eccee
Confidence            99999999998753 7999999999999998654   34555432      22222222  23444444      99999


Q ss_pred             cHHHHHHHHHHhhcCC--C--CCceEEEecc---ccCHHHHHHHHHHhCCCCcc
Q 019415          246 HIDDVCEAHIFCMEKP--S--MSGRFFCTNV---FVSSAEIASCLQQNYPEFHI  292 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~--~--~~g~~n~~~~---~~s~~e~~~~i~~~~~~~~~  292 (341)
                      ||+|++++++.++...  .  ...+||++++   ++|+.|+++.+.+.+...+.
T Consensus       309 ~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~  362 (491)
T PLN02996        309 PADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW  362 (491)
T ss_pred             cccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence            9999999999998753  2  2348999876   48999999999998754443

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=4.1e-32  Score=217.47  Aligned_cols=287  Identities=15%  Similarity=0.135  Sum_probs=217.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   81 (341)
                      +|||||+|++|.+|++|.+.+.++|.  +=-++.-                       --.+||++.++.+++|+  ++.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-----------------------skd~DLt~~a~t~~lF~~ekPt   57 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-----------------------SKDADLTNLADTRALFESEKPT   57 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-----------------------cccccccchHHHHHHHhccCCc
Confidence            47999999999999999999999986  2122111                       12378999999999996  699


Q ss_pred             EEEEeccCCcccc---chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID---GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        82 ~Vi~~a~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                      +|||+|+.+++-.   ..+. +++..|+....|++..|.++| +++++++.|++ .+|...      ..|++|+......
T Consensus        58 hVIhlAAmVGGlf~N~~ynl-dF~r~Nl~indNVlhsa~e~g-v~K~vsclStC-IfPdkt------~yPIdEtmvh~gp  128 (315)
T KOG1431|consen   58 HVIHLAAMVGGLFHNNTYNL-DFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTC-IFPDKT------SYPIDETMVHNGP  128 (315)
T ss_pred             eeeehHhhhcchhhcCCCch-HHHhhcceechhHHHHHHHhc-hhhhhhhccee-ecCCCC------CCCCCHHHhccCC
Confidence            9999999887643   3344 899999999999999999999 99999999998 787665      6789998754432


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCC----CCCCchhhhhHhhHhcCc---cccc
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPY----SSTPVSVIGGLCQLTNNE---YVYQ  230 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~  230 (341)
                      .+     .-.-.|+.+|+++.-.-+.|. ++|...+.+-|.++|||.+...    +.+|..+..+...-..+.   .+++
T Consensus       129 ph-----psN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwG  203 (315)
T KOG1431|consen  129 PH-----PSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWG  203 (315)
T ss_pred             CC-----CCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEec
Confidence            11     113479999999988888898 7899999999999999988865    223333333333322222   3344


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-c--ccCHHHHHHHHHHhCC---CCccccCcCCCCcceE
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-V--FVSSAEIASCLQQNYP---EFHIKQEYLDVPKREI  304 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~--~~s~~e~~~~i~~~~~---~~~~~~~~~~~~~~~~  304 (341)
                      .+.      ..|+|+|++|+|+++++++.+-+.-.-.+++. +  ++|++|+++++.++++   ...... ..+......
T Consensus       204 sG~------PlRqFiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~Dt-tK~DGq~kK  276 (315)
T KOG1431|consen  204 SGS------PLRQFIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDT-TKSDGQFKK  276 (315)
T ss_pred             CCC------hHHHHhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeec-cCCCCCccc
Confidence            444      49999999999999999997644333455554 3  5999999999999983   221111 123344455


Q ss_pred             eecchhhhhcCCccccc-HHHHHHHHHHHHHHc
Q 019415          305 KWGGTKLEEKGFEYNYD-LKMILDDSIKCGRKS  336 (341)
Q Consensus       305 ~~d~~k~~~lg~~~~~~-~~~~l~~~~~~~~~~  336 (341)
                      ..|++||+.|+|.|+++ ++++|.++++|+.++
T Consensus       277 tasnsKL~sl~pd~~ft~l~~ai~~t~~Wy~~N  309 (315)
T KOG1431|consen  277 TASNSKLRSLLPDFKFTPLEQAISETVQWYLDN  309 (315)
T ss_pred             ccchHHHHHhCCCcccChHHHHHHHHHHHHHHh
Confidence            78999999999999888 999999999999764

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-31  Score=257.33  Aligned_cols=302  Identities=18%  Similarity=0.180  Sum_probs=208.2

Q ss_pred             cEEEEecCcchHHHHHHHHHH--HCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh------HHHHHHhc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLL--DKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP------DTFENAIQ   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~------~~~~~~~~   78 (341)
                      |+|||||||||||++|++.|+  +.|++|++++| +... .....+... ....+++++.+|++++      +.+.++ +
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R-~~~~-~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVR-RQSL-SRLEALAAY-WGADRVVPLVGDLTEPGLGLSEADIAEL-G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEEC-cchH-HHHHHHHHh-cCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence            589999999999999999999  57999999999 6543 222222111 0124789999999984      455555 8


Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                      ++|+|||||+......  ......++|+.++.+++++|++.+ +++|||+||..+++ ..       ..+++|+++... 
T Consensus        77 ~~D~Vih~Aa~~~~~~--~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g-~~-------~~~~~e~~~~~~-  144 (657)
T PRK07201         77 DIDHVVHLAAIYDLTA--DEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAG-DY-------EGVFREDDFDEG-  144 (657)
T ss_pred             CCCEEEECceeecCCC--CHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEecccccc-Cc-------cCccccccchhh-
Confidence            9999999999765443  234778999999999999999998 89999999998543 22       233455542211 


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCC-CCCc--hhhhhHhhHhcCccccccccch
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYS-STPV--SVIGGLCQLTNNEYVYQTLRDT  235 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~  235 (341)
                            ..+.+.|+.+|..+|++++..  .+++++++||++|||+...... ....  ++..++..+......+   ...
T Consensus       145 ------~~~~~~Y~~sK~~~E~~~~~~--~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  213 (657)
T PRK07201        145 ------QGLPTPYHRTKFEAEKLVREE--CGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWL---PMV  213 (657)
T ss_pred             ------cCCCCchHHHHHHHHHHHHHc--CCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCccc---ccc
Confidence                  123468999999999999753  4799999999999998654320 0011  1111222221111111   111


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEec-cccCHHHHHHHHHHhCCCCc-------cccCcC---------
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTN-VFVSSAEIASCLQQNYPEFH-------IKQEYL---------  297 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~-~~~s~~e~~~~i~~~~~~~~-------~~~~~~---------  297 (341)
                      ..+.+.++++|++|+++++..++..+...| +||+++ +.+|+.|+++.+++.++...       +|....         
T Consensus       214 ~~~~~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~  293 (657)
T PRK07201        214 GPDGGRTNIVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGP  293 (657)
T ss_pred             cCCCCeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcch
Confidence            122337899999999999999987655545 999987 56999999999999885322       111100         


Q ss_pred             -------------------CCCcceEeecchhhhh-c---CCcccccHHHHHHHHHHHHHHc
Q 019415          298 -------------------DVPKREIKWGGTKLEE-K---GFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       298 -------------------~~~~~~~~~d~~k~~~-l---g~~~~~~~~~~l~~~~~~~~~~  336 (341)
                                         ........+|++++++ |   |+.+. ++.+.+...++|+.++
T Consensus       294 ~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~  354 (657)
T PRK07201        294 VRRLRNAVATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERH  354 (657)
T ss_pred             hhHHHHHHHHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhc
Confidence                               0123445789999877 7   55555 6889999988866553

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=9.6e-31  Score=231.94  Aligned_cols=271  Identities=17%  Similarity=0.146  Sum_probs=187.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      ..||||||||+||||++|++.|+++|++|+...+ +                          +.+.+.+...++  ++|+
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-~--------------------------~~~~~~v~~~l~~~~~D~   60 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-R--------------------------LENRASLEADIDAVKPTH   60 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-c--------------------------cCCHHHHHHHHHhcCCCE
Confidence            3589999999999999999999999999976433 2                          334444555554  6899


Q ss_pred             EEEeccCCccc----cchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHI----DGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        83 Vi~~a~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                      |||+||.....    ........+++|+.++.+++++|++.+ ++ +|++||.+ +|+...........+++|++.+.  
T Consensus        61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~-vy~~~~~~p~~~~~~~~Ee~~p~--  135 (298)
T PLN02778         61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LV-LTNYATGC-IFEYDDAHPLGSGIGFKEEDTPN--  135 (298)
T ss_pred             EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CC-EEEEecce-EeCCCCCCCcccCCCCCcCCCCC--
Confidence            99999987532    123345889999999999999999998 76 56667766 44321100000012467665321  


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhc
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEI  238 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (341)
                             .+.+.|+.+|+++|.++..+.    +..++|++.++|++...       ...++..+.........       
T Consensus       136 -------~~~s~Yg~sK~~~E~~~~~y~----~~~~lr~~~~~~~~~~~-------~~~fi~~~~~~~~~~~~-------  190 (298)
T PLN02778        136 -------FTGSFYSKTKAMVEELLKNYE----NVCTLRVRMPISSDLSN-------PRNFITKITRYEKVVNI-------  190 (298)
T ss_pred             -------CCCCchHHHHHHHHHHHHHhh----ccEEeeecccCCccccc-------HHHHHHHHHcCCCeeEc-------
Confidence                   134789999999999999875    45788888877764221       22345555555432221       


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCC----CccccC-c---CCCCcceEeecch
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPE----FHIKQE-Y---LDVPKREIKWGGT  309 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~----~~~~~~-~---~~~~~~~~~~d~~  309 (341)
                        ..+++|++|++++++.+++.. ..|+||+++ +.+|+.|+++++++.++.    ..+.+. .   ..-...+..+|++
T Consensus       191 --~~s~~yv~D~v~al~~~l~~~-~~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~  267 (298)
T PLN02778        191 --PNSMTILDELLPISIEMAKRN-LTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTT  267 (298)
T ss_pred             --CCCCEEHHHHHHHHHHHHhCC-CCCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHH
Confidence              357999999999999999754 357999987 569999999999999852    111111 0   0012223479999


Q ss_pred             hhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          310 KLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       310 k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |+++ ++-.+. ..+++++..++-+++.
T Consensus       268 k~~~~~~~~~~-~~~~~~~~~~~~~~~~  294 (298)
T PLN02778        268 KLKREFPELLP-IKESLIKYVFEPNKKT  294 (298)
T ss_pred             HHHHhcccccc-hHHHHHHHHHHHHHhh
Confidence            9988 665555 6789999999888653

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.3e-31  Score=218.40  Aligned_cols=303  Identities=16%  Similarity=0.070  Sum_probs=233.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch--hhhhHhhhCCCC-CCceEEEecCCCChHHHHHHhc--CC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK--SKVDLLKSLPGA-ETRLIFFEAEIYDPDTFENAIQ--GC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~--~~   80 (341)
                      +|+.||||-||+-|++|++.|++.||+|+++.| +.+..  ... ++..++.. +..++++.+|++|...+..+++  ++
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~R-rss~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P   79 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKR-RSSSFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP   79 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEee-ccccCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence            478999999999999999999999999999999 64332  222 44444433 3459999999999999999997  69


Q ss_pred             CEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCC-cCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGT-VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                      |.|+|+||...... .+.+..+.+++..|+.+|+++.+..+. --||...||.. .||...      ..|.+|+++.   
T Consensus        80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE-~fG~v~------~~pq~E~TPF---  149 (345)
T COG1089          80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE-LYGLVQ------EIPQKETTPF---  149 (345)
T ss_pred             hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHH-hhcCcc------cCccccCCCC---
Confidence            99999999877665 444558999999999999999999873 24777777766 776655      7899999843   


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccch
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDT  235 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  235 (341)
                             .|.++|+.+|..+--....|. .+|+-.+.=+..+-=+|........++....+.+...+..  ..+++.+- 
T Consensus       150 -------yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldA-  221 (345)
T COG1089         150 -------YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDA-  221 (345)
T ss_pred             -------CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccc-
Confidence                   558999999999999999998 5799888888888777766555333443333333333333  45666655 


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCcccc--------------------
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQ--------------------  294 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~--------------------  294 (341)
                           .|||-|+.|.++++..+++... ...|.+++ ...|++|++++-.+..+ ..+.+                    
T Consensus       222 -----kRDWG~A~DYVe~mwlmLQq~~-PddyViATg~t~sVrefv~~Af~~~g-~~l~w~g~g~~e~g~da~~G~~~V~  294 (345)
T COG1089         222 -----KRDWGHAKDYVEAMWLMLQQEE-PDDYVIATGETHSVREFVELAFEMVG-IDLEWEGTGVDEKGVDAKTGKIIVE  294 (345)
T ss_pred             -----cccccchHHHHHHHHHHHccCC-CCceEEecCceeeHHHHHHHHHHHcC-ceEEEeeccccccccccccCceeEE
Confidence                 9999999999999999999766 46787766 56999999999988774 11111                    


Q ss_pred             ----CcCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHH
Q 019415          295 ----EYLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRK  335 (341)
Q Consensus       295 ----~~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~  335 (341)
                          .+.|....-...|.+|+++ |||+|.+++++.+++|+++-.+
T Consensus       295 idp~~fRPaEV~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~  340 (345)
T COG1089         295 IDPRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADLE  340 (345)
T ss_pred             ECccccCchhhhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHH
Confidence                1224455566789999987 9999999999999999987654

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.97  E-value=2.2e-30  Score=215.10  Aligned_cols=276  Identities=23%  Similarity=0.225  Sum_probs=194.6

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-CCCEEEEec
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-GCDFVFHVA   87 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~Vi~~a   87 (341)
                      |+|||||||||++|+..|.+.||+|++++| +.....            ...+....   .-+.+.+... ++|+|||+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR-~~~~~~------------~~~~~~v~---~~~~~~~~~~~~~DavINLA   64 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTR-RPPKAS------------QNLHPNVT---LWEGLADALTLGIDAVINLA   64 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEc-CCcchh------------hhcCcccc---ccchhhhcccCCCCEEEECC
Confidence            689999999999999999999999999999 765411            01111111   2233444444 799999999


Q ss_pred             cCCcccc---chhHhHhhhhhhhHHHHHHHHHHhcCC-cCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           88 TPLQHID---GYLYKNVVEACVGAAKKIASFCVKSGT-VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        88 ~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |..-...   ..-.+.+.+.-+..|..|+++..+..+ .+.+|.-|..+ +|+...      +..++|++....      
T Consensus        65 G~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvG-yYG~~~------~~~~tE~~~~g~------  131 (297)
T COG1090          65 GEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVG-YYGHSG------DRVVTEESPPGD------  131 (297)
T ss_pred             CCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEE-EecCCC------ceeeecCCCCCC------
Confidence            9755433   334467888899999999999885542 45666666666 888776      789999964333      


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhccCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEILGKL  242 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  242 (341)
                           ..-+..-..=|+......+.|.+++.+|.|.|.|+.....       ..++....-+. ..+++++|      .+
T Consensus       132 -----~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL-------~~m~~~fk~glGG~~GsGrQ------~~  193 (297)
T COG1090         132 -----DFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGAL-------GKMLPLFKLGLGGKLGSGRQ------WF  193 (297)
T ss_pred             -----ChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcch-------hhhcchhhhccCCccCCCCc------ee
Confidence                 3333344444555555545599999999999999865543       23333222222 45555555      99


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCC---ccccCc---CCCCcceEeecc-----hh
Q 019415          243 PLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEF---HIKQEY---LDVPKREIKWGG-----TK  310 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~---~~~~~~---~~~~~~~~~~d~-----~k  310 (341)
                      +|||++|+++++.++++++...|.||+++ .+++.++++.++++.+.+.   ++|...   .-+......++.     .|
T Consensus       194 SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~k  273 (297)
T COG1090         194 SWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKK  273 (297)
T ss_pred             eeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHH
Confidence            99999999999999999999999999987 7899999999999998421   222211   112222224444     45


Q ss_pred             hhhcCCccccc-HHHHHHHHHH
Q 019415          311 LEEKGFEYNYD-LKMILDDSIK  331 (341)
Q Consensus       311 ~~~lg~~~~~~-~~~~l~~~~~  331 (341)
                      +.+.||+++++ +++++.+.+.
T Consensus       274 l~~aGF~F~y~dl~~AL~~il~  295 (297)
T COG1090         274 LEAAGFQFQYPDLEEALADILK  295 (297)
T ss_pred             HHHCCCeeecCCHHHHHHHHHh
Confidence            55579999988 9999998875

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.97  E-value=2.4e-29  Score=230.28  Aligned_cols=256  Identities=18%  Similarity=0.251  Sum_probs=181.2

Q ss_pred             EEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhh----hC--CCC--C-CceEEEecCCCCh------
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLK----SL--PGA--E-TRLIFFEAEIYDP------   70 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~----~~--~~~--~-~~~~~~~~Dl~~~------   70 (341)
                      +|||||||||||++|++.|+++|  ++|++++| +.+.....+.+.    ..  ...  . .+++++.+|++++      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~   79 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVR-AASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSD   79 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEc-cCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCH
Confidence            58999999999999999999998  67999999 765422222221    11  000  0 4799999999764      


Q ss_pred             HHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           71 DTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        71 ~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +.+..+.+++|+|||+|+.....  .+++.+.+.|+.++.+++++|.+.+ .++|||+||.+++... .      ..+..
T Consensus        80 ~~~~~~~~~~d~vih~a~~~~~~--~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~-~------~~~~~  149 (367)
T TIGR01746        80 AEWERLAENVDTIVHNGALVNWV--YPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAI-D------LSTVT  149 (367)
T ss_pred             HHHHHHHhhCCEEEeCCcEeccC--CcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCc-C------CCCcc
Confidence            46777778999999999976643  2355788899999999999999988 8889999999855432 1      12233


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQ  230 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (341)
                      |.+.....     ...+.+.|+.+|+.+|.+++.+.+.|++++++||+.++|+..........++..++....... .++
T Consensus       150 ~~~~~~~~-----~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~-~~p  223 (367)
T TIGR01746       150 EDDAIVTP-----PPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG-AYP  223 (367)
T ss_pred             cccccccc-----ccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC-CCC
Confidence            33321110     112346899999999999998775599999999999999844332111223333333322221 111


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCCCC---CceEEEec-cccCHHHHHHHHHH
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM---SGRFFCTN-VFVSSAEIASCLQQ  285 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~g~~n~~~-~~~s~~e~~~~i~~  285 (341)
                      ....     ...+++|++|+++++..++..+..   .++||+++ ..+++.|+++.+.+
T Consensus       224 ~~~~-----~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~  277 (367)
T TIGR01746       224 DSPE-----LTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER  277 (367)
T ss_pred             CCCc-----cccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH
Confidence            1111     167899999999999999876654   45999987 56999999999998

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=7.2e-29  Score=227.52  Aligned_cols=230  Identities=14%  Similarity=0.121  Sum_probs=172.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----CC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----GC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~   80 (341)
                      ++|+|||||||||||+++++.|+++|++|++++| +.................++++++.+|++|++.+.++++    ++
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAR-EKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEe-chhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            4589999999999999999999999999999999 654311100011111112478999999999999999997    59


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      |+||||++......    ...+++|+.++.+++++|++.+ +++||++||.++ +                         
T Consensus       138 D~Vi~~aa~~~~~~----~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v-~-------------------------  186 (390)
T PLN02657        138 DVVVSCLASRTGGV----KDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICV-Q-------------------------  186 (390)
T ss_pred             cEEEECCccCCCCC----ccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccc-c-------------------------
Confidence            99999988543221    2457789999999999999998 999999999873 2                         


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc--ccccccchhhc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY--VYQTLRDTEEI  238 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  238 (341)
                           .+...|..+|..+|+.++. .+.+++++++||+.+||+.           ..++..+..+.+  .++++..    
T Consensus       187 -----~p~~~~~~sK~~~E~~l~~-~~~gl~~tIlRp~~~~~~~-----------~~~~~~~~~g~~~~~~GdG~~----  245 (390)
T PLN02657        187 -----KPLLEFQRAKLKFEAELQA-LDSDFTYSIVRPTAFFKSL-----------GGQVEIVKDGGPYVMFGDGKL----  245 (390)
T ss_pred             -----CcchHHHHHHHHHHHHHHh-ccCCCCEEEEccHHHhccc-----------HHHHHhhccCCceEEecCCcc----
Confidence                 1135688999999999876 2458999999999999742           112233333332  2333332    


Q ss_pred             cCCC-CcccHHHHHHHHHHhhcCCCC-CceEEEec-c-ccCHHHHHHHHHHhCCC
Q 019415          239 LGKL-PLVHIDDVCEAHIFCMEKPSM-SGRFFCTN-V-FVSSAEIASCLQQNYPE  289 (341)
Q Consensus       239 ~~~~-~~i~v~D~a~~~~~~~~~~~~-~g~~n~~~-~-~~s~~e~~~~i~~~~~~  289 (341)
                        .+ ++||++|+|+++..++..+.. +.+||+++ + .+|+.|+++++.+.++.
T Consensus       246 --~~~~~I~v~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        246 --CACKPISEADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGK  298 (390)
T ss_pred             --cccCceeHHHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCC
Confidence              34 579999999999999876554 34999986 4 58999999999999853

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.97  E-value=1.9e-29  Score=216.01  Aligned_cols=234  Identities=16%  Similarity=0.127  Sum_probs=173.4

Q ss_pred             EEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCce----EEEecCCCChHHHHHHhc--CCC
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRL----IFFEAEIYDPDTFENAIQ--GCD   81 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~Dl~~~~~~~~~~~--~~d   81 (341)
                      ||||||+|.||+.|+++|++.+ .++++++| +.......+..-.....++++    ..+.+|+.|.+.+..+++  ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~-~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDR-DENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES--HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCC-ChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            7999999999999999999997 68999999 765433222221100011234    346899999999999999  899


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      +|||+||...... ++.+.+.+++|+.|+.|++++|.+++ +++||++||..++.                         
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv~-------------------------  133 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAVN-------------------------  133 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCSS-------------------------
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccCC-------------------------
Confidence            9999999888765 44455999999999999999999999 99999999997543                         


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cC---CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc-cccccch
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SS---GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV-YQTLRDT  235 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~---~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  235 (341)
                            |.+.||.||+.+|+++..++ ..   +..++++|+|+|.|...       +.++.|.+++..+.++ +.+++. 
T Consensus       134 ------PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~G-------SVip~F~~Qi~~g~PlTvT~p~m-  199 (293)
T PF02719_consen  134 ------PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRG-------SVIPLFKKQIKNGGPLTVTDPDM-  199 (293)
T ss_dssp             --------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTT-------SCHHHHHHHHHTTSSEEECETT--
T ss_pred             ------CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCC-------cHHHHHHHHHHcCCcceeCCCCc-
Confidence                  47899999999999999998 33   68999999999999742       3589999999888755 555555 


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCC
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYP  288 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~  288 (341)
                           .|=|+.+++.++.++.++.....+.+|..-- .++++.|+++.+.+..+
T Consensus       200 -----tRffmti~EAv~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  200 -----TRFFMTIEEAVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSG  248 (293)
T ss_dssp             -----EEEEE-HHHHHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT
T ss_pred             -----EEEEecHHHHHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcc
Confidence                 8899999999999999987665555787754 67999999999999885

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.96  E-value=9.8e-28  Score=217.89  Aligned_cols=237  Identities=19%  Similarity=0.178  Sum_probs=198.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhh-hCCCCCCceEEEecCCCChHHHHHHhcC--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLK-SLPGAETRLIFFEAEIYDPDTFENAIQG--C   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~   80 (341)
                      ++|+||||||+|.||+.+++++++.+ .++++++| +..+....+..- ...+ +.++.++-+|+.|.+.+..++++  +
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~-~E~~~~~i~~el~~~~~-~~~~~~~igdVrD~~~~~~~~~~~kv  326 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSR-DEYKLYLIDMELREKFP-ELKLRFYIGDVRDRDRVERAMEGHKV  326 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecC-chHHHHHHHHHHHhhCC-CcceEEEecccccHHHHHHHHhcCCC
Confidence            57899999999999999999999987 57888888 665433332222 2111 45899999999999999999997  9


Q ss_pred             CEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDH  159 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (341)
                      |+|||+||...... +..+.+.+.+|+.||.|++++|.+.+ +++||.+||..+++                        
T Consensus       327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV~------------------------  381 (588)
T COG1086         327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAVN------------------------  381 (588)
T ss_pred             ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCcccC------------------------
Confidence            99999999988766 55556999999999999999999999 99999999998766                        


Q ss_pred             CCccCcchhhhHHHhHHHHHHHHHhhcc-C---CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccc
Q 019415          160 PLTCHNEYLRVYIESKMKSEKELLSYGS-S---GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRD  234 (341)
Q Consensus       160 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~---~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  234 (341)
                             |.+.||.||+.+|+.+..+++ .   +.+++++|.|||.|...       +.++.|.+++.++. ..+.+++.
T Consensus       382 -------PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG-------SViPlFk~QI~~GgplTvTdp~m  447 (588)
T COG1086         382 -------PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG-------SVIPLFKKQIAEGGPLTVTDPDM  447 (588)
T ss_pred             -------CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC-------CCHHHHHHHHHcCCCccccCCCc
Confidence                   468999999999999999973 3   48999999999999743       35899999998887 44555555


Q ss_pred             hhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCC
Q 019415          235 TEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYP  288 (341)
Q Consensus       235 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~  288 (341)
                            .|=|+.+.|.++.++.+......+.+|.+-- +++++.|+++.+.+..+
T Consensus       448 ------tRyfMTI~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         448 ------TRFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             ------eeEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence                  8999999999999999998766555888865 67999999999999884

>PRK12320 hypothetical protein; Provisional

Probab=99.96  E-value=3.2e-27  Score=225.90  Aligned_cols=235  Identities=13%  Similarity=0.173  Sum_probs=172.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      ||||||||+||||++|++.|+++||+|++++| ....           ....+++++.+|++++. +.+++.++|+|||+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr-~~~~-----------~~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHL   67 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQ-HPHD-----------ALDPRVDYVCASLRNPV-LQELAGEADAVIHL   67 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-Chhh-----------cccCCceEEEccCCCHH-HHHHhcCCCEEEEc
Confidence            58999999999999999999999999999998 5432           01236889999999985 78888899999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNE  166 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  166 (341)
                      |+....       ....+|+.++.|++++|++.+ + ++||+||..   +..                            
T Consensus        68 Aa~~~~-------~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~---G~~----------------------------  107 (699)
T PRK12320         68 APVDTS-------APGGVGITGLAHVANAAARAG-A-RLLFVSQAA---GRP----------------------------  107 (699)
T ss_pred             CccCcc-------chhhHHHHHHHHHHHHHHHcC-C-eEEEEECCC---CCC----------------------------
Confidence            986422       122579999999999999998 5 799999863   110                            


Q ss_pred             hhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCccc
Q 019415          167 YLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH  246 (341)
Q Consensus       167 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (341)
                        ..|.    .+|.++..   ++++++++|++++||+.....  ...++..++.....+.              ...+||
T Consensus       108 --~~~~----~aE~ll~~---~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~l~~~~~~~--------------pI~vIy  162 (699)
T PRK12320        108 --ELYR----QAETLVST---GWAPSLVIRIAPPVGRQLDWM--VCRTVATLLRSKVSAR--------------PIRVLH  162 (699)
T ss_pred             --cccc----HHHHHHHh---cCCCEEEEeCceecCCCCccc--HhHHHHHHHHHHHcCC--------------ceEEEE
Confidence              0121    35766653   358999999999999964432  2233444443222211              455799


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcCCCCcceEeecchhhhh-cCCcccccHH
Q 019415          247 IDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEE-KGFEYNYDLK  323 (341)
Q Consensus       247 v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~~~~~~~  323 (341)
                      ++|++++++.+++.. ..|+||++++ .+|+.|+++.+....|...+.   .........-|.+..+. ++|.|+..|+
T Consensus       163 VdDvv~alv~al~~~-~~GiyNIG~~~~~Si~el~~~i~~~~p~~~~~---~~~~~~~~~pdi~~a~~~~~w~~~~~~~  237 (699)
T PRK12320        163 LDDLVRFLVLALNTD-RNGVVDLATPDTTNVVTAWRLLRSVDPHLRTR---RVRSWEQLIPEVDIAAVQEDWNFEFGWQ  237 (699)
T ss_pred             HHHHHHHHHHHHhCC-CCCEEEEeCCCeeEHHHHHHHHHHhCCCcccc---ccccHHHhCCCCchhhhhcCCCCcchHH
Confidence            999999999999753 3569999985 599999999998875433222   22333455677777776 8999997764

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.96  E-value=5e-28  Score=209.44  Aligned_cols=224  Identities=20%  Similarity=0.285  Sum_probs=133.3

Q ss_pred             EecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhh-CC----------CCCCceEEEecCCCCh------H
Q 019415           11 VTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKS-LP----------GAETRLIFFEAEIYDP------D   71 (341)
Q Consensus        11 I~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~Dl~~~------~   71 (341)
                      |||||||+|++|+++|++++.  +|++++| ........+++.. +.          ....+++++.||++++      +
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR-~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVR-ASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE--SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEe-CcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999986  8999999 7655344444421 11          0146999999999985      4


Q ss_pred             HHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCC--C
Q 019415           72 TFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS--I  149 (341)
Q Consensus        72 ~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~--~  149 (341)
                      .+..+.+++|+||||||..+...  +++.+.+.|+.|+.++++.|.+.+ .++|+|+||+. +.+.....  ..+..  .
T Consensus        80 ~~~~L~~~v~~IiH~Aa~v~~~~--~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~-v~~~~~~~--~~~~~~~~  153 (249)
T PF07993_consen   80 DYQELAEEVDVIIHCAASVNFNA--PYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAY-VAGSRPGT--IEEKVYPE  153 (249)
T ss_dssp             HHHHHHHH--EEEE--SS-SBS---S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGG-GTTS-TTT----SSS-HH
T ss_pred             Hhhccccccceeeecchhhhhcc--cchhhhhhHHHHHHHHHHHHHhcc-CcceEEecccc-ccCCCCCc--cccccccc
Confidence            67777789999999999988865  356789999999999999999877 67999999943 44332210  00011  1


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhcc-CCceEEEEecCceeCCCCCCCCCCCc-hhhhhHhhHhcCc-
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS-SGLEVVALALGVVAGDTNLPYSSTPV-SVIGGLCQLTNNE-  226 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~~~~~~vlRp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~-  226 (341)
                      .|.+...       .....+.|..||+.+|++++.+.+ .|++++|+||+.|+|....+...... +...+...+..+. 
T Consensus       154 ~~~~~~~-------~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~  226 (249)
T PF07993_consen  154 EEDDLDP-------PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAF  226 (249)
T ss_dssp             H--EEE---------TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EE
T ss_pred             ccccchh-------hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCc
Confidence            1111111       123467999999999999999984 49999999999999955444322233 2333334343333 


Q ss_pred             c-ccccccchhhccCCCCcccHHHHHHHH
Q 019415          227 Y-VYQTLRDTEEILGKLPLVHIDDVCEAH  254 (341)
Q Consensus       227 ~-~~~~~~~~~~~~~~~~~i~v~D~a~~~  254 (341)
                      + ......      ...|+++|+.+|++|
T Consensus       227 p~~~~~~~------~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  227 PDLPGDPD------ARLDLVPVDYVARAI  249 (249)
T ss_dssp             ES-SB---------TT--EEEHHHHHHHH
T ss_pred             ccccCCCC------ceEeEECHHHHHhhC
Confidence            2 222222      269999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=6.2e-27  Score=229.77  Aligned_cols=262  Identities=16%  Similarity=0.131  Sum_probs=183.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      ..||||||||+||||++|++.|.++|++|... .                          +|++|.+.+...+.  ++|+
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-~--------------------------~~l~d~~~v~~~i~~~~pd~  431 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-K--------------------------GRLEDRSSLLADIRNVKPTH  431 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee-c--------------------------cccccHHHHHHHHHhhCCCE
Confidence            46899999999999999999999999987421 1                          34677777877776  7999


Q ss_pred             EEEeccCCccc---c-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCC--CCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHI---D-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLK--EDGSAGYKDSIDETCYTP  156 (341)
Q Consensus        83 Vi~~a~~~~~~---~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~--~~~~~~~~~~~~E~~~~~  156 (341)
                      |||||+.....   . .......+++|+.++.+++++|++.+ ++ +|++||.+++.+..  ...   ...+++|++.+.
T Consensus       432 Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~-~v~~Ss~~v~~~~~~~~~~---~~~p~~E~~~~~  506 (668)
T PLN02260        432 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LL-MMNFATGCIFEYDAKHPEG---SGIGFKEEDKPN  506 (668)
T ss_pred             EEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-Ce-EEEEcccceecCCcccccc---cCCCCCcCCCCC
Confidence            99999987432   1 33445889999999999999999998 64 67888877443211  001   024677776221


Q ss_pred             CCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchh
Q 019415          157 PDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTE  236 (341)
Q Consensus       157 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (341)
                               .+.+.|+.||.++|++++.+.    +..++|+.++||......       ..|++.+.+....+.-     
T Consensus       507 ---------~~~~~Yg~sK~~~E~~~~~~~----~~~~~r~~~~~~~~~~~~-------~nfv~~~~~~~~~~~v-----  561 (668)
T PLN02260        507 ---------FTGSFYSKTKAMVEELLREYD----NVCTLRVRMPISSDLSNP-------RNFITKISRYNKVVNI-----  561 (668)
T ss_pred             ---------CCCChhhHHHHHHHHHHHhhh----hheEEEEEEecccCCCCc-------cHHHHHHhccceeecc-----
Confidence                     124889999999999998774    567788888887542221       1233333333221111     


Q ss_pred             hccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCC-CC---ccccCcC-----CCCcceEee
Q 019415          237 EILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYP-EF---HIKQEYL-----DVPKREIKW  306 (341)
Q Consensus       237 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~-~~---~~~~~~~-----~~~~~~~~~  306 (341)
                          ..+..+++|++.++..+++. ...|+||++++ .+|+.|+++.+.+... ..   +++....     ...+.. .+
T Consensus       562 ----p~~~~~~~~~~~~~~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~-~l  635 (668)
T PLN02260        562 ----PNSMTVLDELLPISIEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNN-EM  635 (668)
T ss_pred             ----CCCceehhhHHHHHHHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccc-cc
Confidence                23467788999998888864 44689999984 5999999999998763 22   1211111     113344 89


Q ss_pred             cchhhhh-cCCcccccHHHHHHHHHH
Q 019415          307 GGTKLEE-KGFEYNYDLKMILDDSIK  331 (341)
Q Consensus       307 d~~k~~~-lg~~~~~~~~~~l~~~~~  331 (341)
                      |++|+++ +|. +. +|+++|++++.
T Consensus       636 ~~~k~~~~~~~-~~-~~~~~l~~~~~  659 (668)
T PLN02260        636 DASKLKKEFPE-LL-SIKESLIKYVF  659 (668)
T ss_pred             cHHHHHHhCcc-cc-chHHHHHHHHh
Confidence            9999988 788 66 89999999885

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.95  E-value=6.4e-27  Score=221.50  Aligned_cols=265  Identities=16%  Similarity=0.194  Sum_probs=183.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEecCCCCchhhhhHhh-hC-------------CC-----CCCceEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLK-SL-------------PG-----AETRLIF   62 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-~~-------------~~-----~~~~~~~   62 (341)
                      .+++|||||||||||++|++.|++.+.   +|+++.| ........+++. .+             +.     ...++..
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR-~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIK-AKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEe-cCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            568999999999999999999998753   6899999 654433333331 10             00     1357999


Q ss_pred             EecCCCCh------HHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccC
Q 019415           63 FEAEIYDP------DTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASP  136 (341)
Q Consensus        63 ~~~Dl~~~------~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~  136 (341)
                      +.+|++++      +..+.+.+++|+|||+|+.....  .+++..+++|+.++.+++++|++.+++++|||+||+++++.
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~--~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~  274 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD--ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQ  274 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc--cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecC
Confidence            99999987      45666667899999999988754  23568899999999999999998865889999999985542


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCC-------------------------------------------------CCCccCcch
Q 019415          137 LKEDGSAGYKDSIDETCYTPPD-------------------------------------------------HPLTCHNEY  167 (341)
Q Consensus       137 ~~~~~~~~~~~~~~E~~~~~~~-------------------------------------------------~~~~~~~~~  167 (341)
                      .        ...+.|..+...+                                                 .........
T Consensus       275 ~--------~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~  346 (605)
T PLN02503        275 R--------QGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGW  346 (605)
T ss_pred             C--------CCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCC
Confidence            2        1233343332100                                                 000012334


Q ss_pred             hhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhh--Hhh----HhcCccccccccchhhccCC
Q 019415          168 LRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGG--LCQ----LTNNEYVYQTLRDTEEILGK  241 (341)
Q Consensus       168 ~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~  241 (341)
                      .+.|..+|.++|.+++++. .+++++|+||+.|.+....+   .|.|++..  ...    ...+..  .  ...+++...
T Consensus       347 pNtYt~TK~lAE~lV~~~~-~~LPv~IvRPsiV~st~~eP---~pGw~d~~~~~~p~~~~~g~G~l--r--~~~~~~~~~  418 (605)
T PLN02503        347 QDTYVFTKAMGEMVINSMR-GDIPVVIIRPSVIESTWKDP---FPGWMEGNRMMDPIVLYYGKGQL--T--GFLADPNGV  418 (605)
T ss_pred             CChHHHHHHHHHHHHHHhc-CCCCEEEEcCCEecccccCC---ccccccCccccchhhhheeccce--e--EEEeCCCee
Confidence            5899999999999999765 37999999999995543333   23444331  110    111110  0  022334449


Q ss_pred             CCcccHHHHHHHHHHhhcC-C---C-CCceEEEecc---ccCHHHHHHHHHHhCC
Q 019415          242 LPLVHIDDVCEAHIFCMEK-P---S-MSGRFFCTNV---FVSSAEIASCLQQNYP  288 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~-~---~-~~g~~n~~~~---~~s~~e~~~~i~~~~~  288 (341)
                      .|+|+|+.|+++++.++.. .   . ...+||++++   ++++.|+.+.+.+.+.
T Consensus       419 ~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~  473 (605)
T PLN02503        419 LDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYK  473 (605)
T ss_pred             EeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh
Confidence            9999999999999998542 1   1 2249999864   5899999999998763

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.95  E-value=2.7e-26  Score=190.37  Aligned_cols=282  Identities=16%  Similarity=0.198  Sum_probs=206.3

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .++..+-|+|||||+|++++.+|.+.|-||++-.|.+..+...++....    ...+-+...|+.|++++.++.+..++|
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd----LGQvl~~~fd~~DedSIr~vvk~sNVV  134 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD----LGQVLFMKFDLRDEDSIRAVVKHSNVV  134 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc----ccceeeeccCCCCHHHHHHHHHhCcEE
Confidence            3456778999999999999999999999999999933333222222222    357899999999999999999999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+.|.-....  .+ .+.++|+.++..|+..|++.| +.|||++|+..+..                            
T Consensus       135 INLIGrd~eTk--nf-~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv----------------------------  182 (391)
T KOG2865|consen  135 INLIGRDYETK--NF-SFEDVNVHIAERLARICKEAG-VERFIHVSCLGANV----------------------------  182 (391)
T ss_pred             EEeeccccccC--Cc-ccccccchHHHHHHHHHHhhC-hhheeehhhccccc----------------------------
Confidence            99988543322  23 778999999999999999999 99999999987321                            


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                        ...+.|-.+|.++|..+++..   ...+|+||+.+||..+...   +. ...+.+. .+..+.+..++.+     ...
T Consensus       183 --~s~Sr~LrsK~~gE~aVrdaf---PeAtIirPa~iyG~eDrfl---n~-ya~~~rk-~~~~pL~~~GekT-----~K~  247 (391)
T KOG2865|consen  183 --KSPSRMLRSKAAGEEAVRDAF---PEATIIRPADIYGTEDRFL---NY-YASFWRK-FGFLPLIGKGEKT-----VKQ  247 (391)
T ss_pred             --cChHHHHHhhhhhHHHHHhhC---CcceeechhhhcccchhHH---HH-HHHHHHh-cCceeeecCCcce-----eec
Confidence              124789999999999999876   4789999999999977653   11 2222222 2333555554432     788


Q ss_pred             cccHHHHHHHHHHhhcCCCCCc-eEEEec-cccCHHHHHHHHHHhCCC------CccccC-------------cC-----
Q 019415          244 LVHIDDVCEAHIFCMEKPSMSG-RFFCTN-VFVSSAEIASCLQQNYPE------FHIKQE-------------YL-----  297 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~~~g-~~n~~~-~~~s~~e~~~~i~~~~~~------~~~~~~-------------~~-----  297 (341)
                      .|||-|||++|..++..+.+.| +|-.++ ..+.+.|+++.+-+...+      .+.|+.             +.     
T Consensus       248 PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pl  327 (391)
T KOG2865|consen  248 PVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPL  327 (391)
T ss_pred             cEEEehHHHHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCC
Confidence            9999999999999999998888 896555 779999999988775421      111110             00     


Q ss_pred             -CC-----CcceEeecchh-hhhcCCcccccHHHHHHHHHHHHHHcC
Q 019415          298 -DV-----PKREIKWGGTK-LEEKGFEYNYDLKMILDDSIKCGRKSG  337 (341)
Q Consensus       298 -~~-----~~~~~~~d~~k-~~~lg~~~~~~~~~~l~~~~~~~~~~~  337 (341)
                       ..     ...+..++... +++||..++ +++....+.+..+++.|
T Consensus       328 n~d~ie~~~v~~~vlt~~~tleDLgv~~t-~le~~~~e~l~~yR~~~  373 (391)
T KOG2865|consen  328 NRDQIERLTVTDLVLTGAPTLEDLGVVLT-KLELYPVEFLRQYRKGG  373 (391)
T ss_pred             CHHHhhheeehhhhcCCCCcHhhcCceee-ecccccHHHHHHHhhcc
Confidence             01     11222233333 355999977 88888888887777663

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.94  E-value=7.5e-25  Score=231.75  Aligned_cols=265  Identities=16%  Similarity=0.221  Sum_probs=185.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC----CeEEEEecCCCCchhhhhHhhhC--------CCCCCceEEEecCCCCh---
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG----YIVHTTLRPNLEDKSKVDLLKSL--------PGAETRLIFFEAEIYDP---   70 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~~~~~Dl~~~---   70 (341)
                      .++|||||||||+|+++++.|++.+    ++|+++.| +.........+...        .....+++++.+|+.++   
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R-~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVR-AKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEEC-cCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            5799999999999999999999987    89999999 76543333333210        11123789999999753   


Q ss_pred             ---HHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCC-CC---
Q 019415           71 ---DTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDG-SA---  143 (341)
Q Consensus        71 ---~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~-~~---  143 (341)
                         +.+..+..++|+|||+|+......  ++..+...|+.++.+++++|.+.+ +++|+|+||.++++...... +.   
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~~~--~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHWVY--PYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecCcc--CHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhh
Confidence               567777789999999999876532  344666789999999999999887 89999999998553211000 00   


Q ss_pred             -CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          144 -GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       144 -~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                       .....+.|.++....     ...+.+.|+.||+.+|.++..+.+.|++++++||+.|||+..........++..+++..
T Consensus      1127 ~~~~~~~~e~~~~~~~-----~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~ 1201 (1389)
T TIGR03443      1127 QAGGAGIPESDDLMGS-----SKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGC 1201 (1389)
T ss_pred             hccCCCCCcccccccc-----cccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHH
Confidence             001223444322110     11234679999999999999877569999999999999996655422233444444332


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC--C-ceEEEecc-ccCHHHHHHHHHHh
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM--S-GRFFCTNV-FVSSAEIASCLQQN  286 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~-g~~n~~~~-~~s~~e~~~~i~~~  286 (341)
                      ... ..++...      +.++|++|+|++++++.++.++..  . .+||++++ .+++.++++.+.+.
T Consensus      1202 ~~~-~~~p~~~------~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1202 IQL-GLIPNIN------NTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             HHh-CCcCCCC------CccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            221 1222222      279999999999999999876532  2 38999875 58999999999764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=1.3e-25  Score=198.51  Aligned_cols=205  Identities=17%  Similarity=0.239  Sum_probs=149.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh------cC-C
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI------QG-C   80 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------~~-~   80 (341)
                      +||||||||+||++++++|+++|++|++++| +.+..           ...+++.+.+|++|++.+.+++      ++ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R-~~~~~-----------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASR-SSSSS-----------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeC-CCccc-----------cCCCCccccccCCCHHHHHHHHhcccCcCCce
Confidence            4899999999999999999999999999999 76531           1136777889999999999998      56 9


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      |.|+|+++.....            .....+++++|++.| +++||++||..+..+  .                     
T Consensus        69 d~v~~~~~~~~~~------------~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~--~---------------------  112 (285)
T TIGR03649        69 SAVYLVAPPIPDL------------APPMIKFIDFARSKG-VRRFVLLSASIIEKG--G---------------------  112 (285)
T ss_pred             eEEEEeCCCCCCh------------hHHHHHHHHHHHHcC-CCEEEEeeccccCCC--C---------------------
Confidence            9999998753211            234568999999999 999999999753221  0                     


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhcc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEIL  239 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  239 (341)
                                  ..+...|+.++..  .|++++++||+.++++.....         ....+.... ...+.      +.
T Consensus       113 ------------~~~~~~~~~l~~~--~gi~~tilRp~~f~~~~~~~~---------~~~~~~~~~~~~~~~------g~  163 (285)
T TIGR03649       113 ------------PAMGQVHAHLDSL--GGVEYTVLRPTWFMENFSEEF---------HVEAIRKENKIYSAT------GD  163 (285)
T ss_pred             ------------chHHHHHHHHHhc--cCCCEEEEeccHHhhhhcccc---------cccccccCCeEEecC------CC
Confidence                        0122334444421  389999999999986532111         111122222 22222      23


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCC-ceEEEec-cccCHHHHHHHHHHhCCC
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMS-GRFFCTN-VFVSSAEIASCLQQNYPE  289 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~-g~~n~~~-~~~s~~e~~~~i~~~~~~  289 (341)
                      +.++||+++|+|+++..++..+... +.|++++ +.+|+.|+++.+.+.++.
T Consensus       164 ~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~  215 (285)
T TIGR03649       164 GKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGR  215 (285)
T ss_pred             CccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCC
Confidence            3899999999999999999876543 4898877 679999999999999853

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.94  E-value=1e-25  Score=183.18  Aligned_cols=301  Identities=15%  Similarity=0.065  Sum_probs=216.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch--hhhhHhhhCCCCC--CceEEEecCCCChHHHHHHhc--CC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK--SKVDLLKSLPGAE--TRLIFFEAEIYDPDTFENAIQ--GC   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~--~~   80 (341)
                      +..||||-||+=|++|++.|+..||+|+++.| +.+..  .+++++-.-|..+  ..++.+.+|++|...+.+++.  ++
T Consensus        29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiR-RsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP  107 (376)
T KOG1372|consen   29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIR-RSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP  107 (376)
T ss_pred             eEEEEecccCCCchHHHHHHHhCCceeeEEEe-eccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence            46889999999999999999999999999999 76653  3566666555443  468889999999999999997  68


Q ss_pred             CEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCC--cCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGT--VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPP  157 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (341)
                      +-|+|+|+...... .+..+...++...|+.+|+++.+.++-  .-||-..||.. .||...      +.|..|.++.  
T Consensus       108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSE-lyGkv~------e~PQsE~TPF--  178 (376)
T KOG1372|consen  108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSE-LYGKVQ------EIPQSETTPF--  178 (376)
T ss_pred             hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHh-hccccc------CCCcccCCCC--
Confidence            99999999877765 444568889999999999999999872  23566666665 776555      6788888733  


Q ss_pred             CCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccc
Q 019415          158 DHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRD  234 (341)
Q Consensus       158 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  234 (341)
                              .|.++|+.+|..+-.++..|. .+++=.+.--+.+--.|....+...+.....+.+.-.++.  ..+++.+-
T Consensus       179 --------yPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a  250 (376)
T KOG1372|consen  179 --------YPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSA  250 (376)
T ss_pred             --------CCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhh
Confidence                    558999999999877776666 3344333222222223333322112222222233333333  44556555


Q ss_pred             hhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCC---------------------ccc
Q 019415          235 TEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEF---------------------HIK  293 (341)
Q Consensus       235 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~---------------------~~~  293 (341)
                            .|||-|..|.++|+..++++.++......+++..|++|+.+.--...+..                     .+.
T Consensus       251 ------~RDWGhA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~  324 (376)
T KOG1372|consen  251 ------LRDWGHAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVD  324 (376)
T ss_pred             ------hcccchhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEec
Confidence                  99999999999999999998776555555667899999998877655310                     001


Q ss_pred             c-CcCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHH
Q 019415          294 Q-EYLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIK  331 (341)
Q Consensus       294 ~-~~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~  331 (341)
                      . -+.|-.......|.+|+++ |||+|+.++.+-+++|+.
T Consensus       325 ~kYyRPtEVd~LqGdasKAk~~LgW~pkv~f~eLVkeMv~  364 (376)
T KOG1372|consen  325 PKYYRPTEVDTLQGDASKAKKTLGWKPKVTFPELVKEMVA  364 (376)
T ss_pred             ccccCcchhhhhcCChHHHHHhhCCCCccCHHHHHHHHHH
Confidence            1 1123455667889999988 999999999999888874

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.94  E-value=9.9e-26  Score=196.19  Aligned_cols=260  Identities=20%  Similarity=0.241  Sum_probs=180.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhC-C-------CCCCceEEEecCCCCh------H
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSL-P-------GAETRLIFFEAEIYDP------D   71 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~Dl~~~------~   71 (341)
                      ++||+||||||+|.+|+..|+.+- .+|+|++| ..+......++... .       ...++++.+.+|+..+      .
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVR-A~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~   79 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVR-AQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER   79 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEe-cCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence            479999999999999999999985 49999999 87753333333321 1       2346899999999954      5


Q ss_pred             HHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           72 TFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        72 ~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      .+.++.+.+|.|||+||.++.-  .++.++...||.|+..+++.|...+ .|.|+|+||.++........   .+...+|
T Consensus        80 ~~~~La~~vD~I~H~gA~Vn~v--~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~---~~~~~~~  153 (382)
T COG3320          80 TWQELAENVDLIIHNAALVNHV--FPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSN---FTVDFDE  153 (382)
T ss_pred             HHHHHhhhcceEEecchhhccc--CcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCC---Ccccccc
Confidence            7888888999999999988754  3467999999999999999999987 89999999999544322211   0112222


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccccc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQT  231 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (341)
                      .+.....     -..+.+.|+.||+.+|.+++...+.|++++|+|||.|.|+...+....+.|+..+...+.........
T Consensus       154 ~~~~~~~-----~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~  228 (382)
T COG3320         154 ISPTRNV-----GQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS  228 (382)
T ss_pred             ccccccc-----cCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCc
Confidence            2211111     13457899999999999999998779999999999999998755533555666666555544322211


Q ss_pred             ccchhhccCCCCcccHHHHHHHH-----------HHhhcCCCCC-ceEEEe--ccccCHHHHHHHHHH
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAH-----------IFCMEKPSMS-GRFFCT--NVFVSSAEIASCLQQ  285 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~-----------~~~~~~~~~~-g~~n~~--~~~~s~~e~~~~i~~  285 (341)
                      ..       ..+++.++++++++           ..+..++... ..|++.  +..+.+.++.+.+.+
T Consensus       229 ~~-------~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         229 EY-------SLDMLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             cc-------chhhCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            11       44455544444333           3333322221 245533  345899999999888

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.9e-24  Score=186.02  Aligned_cols=232  Identities=15%  Similarity=0.073  Sum_probs=165.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      |+||||||+|+||+++++.|+++|++|+++.| +...   .+.+...  ...++.++.+|++|.+.+.++++       +
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r-~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVR-RPDA---LDDLKAR--YGDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHh--ccCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999 6532   2222221  12368899999999988877664       4


Q ss_pred             CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +|+|||+||......     .+.++..+++|+.++.++++++    ++.+ .++||++||.....+.             
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------------  142 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAY-------------  142 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCC-------------
Confidence            799999999765432     2334678899999999999997    4555 6899999997643211             


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCce---eCCCCCCCCCCCch----hhhhH
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVV---AGDTNLPYSSTPVS----VIGGL  219 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v---~G~~~~~~~~~~~~----~~~~~  219 (341)
                                     .+.+.|+.+|...|.+++.++ +   +|++++++||+.+   ||++.........+    ...+.
T Consensus       143 ---------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~  207 (276)
T PRK06482        143 ---------------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLR  207 (276)
T ss_pred             ---------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHH
Confidence                           124789999999999998886 3   5999999999988   55433221000000    11122


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccc-cCHHHHHHHHHHhC
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVF-VSSAEIASCLQQNY  287 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~-~s~~e~~~~i~~~~  287 (341)
                      +.+...       .       ..-+.+++|++++++.++........||++++. .++.|+++.+.+..
T Consensus       208 ~~~~~~-------~-------~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  262 (276)
T PRK06482        208 RALADG-------S-------FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAAL  262 (276)
T ss_pred             HHHhhc-------c-------CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHH
Confidence            222111       1       222567999999999999866555689999864 77777777666654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.92  E-value=9.8e-24  Score=174.24  Aligned_cols=183  Identities=28%  Similarity=0.392  Sum_probs=141.6

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEecc
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVAT   88 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~a~   88 (341)
                      |+|+||||++|++++++|+++|++|++++| +.++.   +.       ..+++++.+|+.|++.+.++++++|+|||+++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R-~~~~~---~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVR-SPSKA---ED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEES-SGGGH---HH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEec-Cchhc---cc-------ccccccceeeehhhhhhhhhhhhcchhhhhhh
Confidence            799999999999999999999999999999 76532   21       35899999999999999999999999999997


Q ss_pred             CCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchh
Q 019415           89 PLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYL  168 (341)
Q Consensus        89 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  168 (341)
                      ....            ....+.++++++++.+ ++++|++||.+ .+....      .....+.            ....
T Consensus        70 ~~~~------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~-~~~~~~------~~~~~~~------------~~~~  117 (183)
T PF13460_consen   70 PPPK------------DVDAAKNIIEAAKKAG-VKRVVYLSSAG-VYRDPP------GLFSDED------------KPIF  117 (183)
T ss_dssp             STTT------------HHHHHHHHHHHHHHTT-SSEEEEEEETT-GTTTCT------SEEEGGT------------CGGG
T ss_pred             hhcc------------cccccccccccccccc-cccceeeeccc-cCCCCC------ccccccc------------ccch
Confidence            5443            1677889999999998 99999999998 443222      1111111            1123


Q ss_pred             hhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHH
Q 019415          169 RVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHID  248 (341)
Q Consensus       169 ~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  248 (341)
                      ..|...|..+|+.++   +.+++++++||+.+||+.....    .+...             ....      ..++|+++
T Consensus       118 ~~~~~~~~~~e~~~~---~~~~~~~ivrp~~~~~~~~~~~----~~~~~-------------~~~~------~~~~i~~~  171 (183)
T PF13460_consen  118 PEYARDKREAEEALR---ESGLNWTIVRPGWIYGNPSRSY----RLIKE-------------GGPQ------GVNFISRE  171 (183)
T ss_dssp             HHHHHHHHHHHHHHH---HSTSEEEEEEESEEEBTTSSSE----EEESS-------------TSTT------SHCEEEHH
T ss_pred             hhhHHHHHHHHHHHH---hcCCCEEEEECcEeEeCCCcce----eEEec-------------cCCC------CcCcCCHH
Confidence            679999999998886   3489999999999999964321    11110             1111      66899999


Q ss_pred             HHHHHHHHhhcC
Q 019415          249 DVCEAHIFCMEK  260 (341)
Q Consensus       249 D~a~~~~~~~~~  260 (341)
                      |+|++++.++++
T Consensus       172 DvA~~~~~~l~~  183 (183)
T PF13460_consen  172 DVAKAIVEALEN  183 (183)
T ss_dssp             HHHHHHHHHHH-
T ss_pred             HHHHHHHHHhCC
Confidence            999999998863

...

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.92  E-value=6.5e-24  Score=185.39  Aligned_cols=222  Identities=15%  Similarity=0.104  Sum_probs=156.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||+++++.|++.|++|++++| +.......  ...+......+.++++|+++++.+.++++      
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADL-NQDGANAV--ADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHH--HHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999 76432221  11111223468889999999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhH----HHHHHHHH-HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGA----AKKIASFC-VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~----~~~l~~~~-~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|+|||+|+......     .+.++..+++|+.+    +.++++++ ++.+ .++||++||.....+.          
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~----------  151 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEAS----------  151 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCC----------
Confidence             3899999999764322     33456778899999    66677777 6655 7899999997643321          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchh-------h
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSV-------I  216 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~-------~  216 (341)
                                        .....|+.+|...+.+++.++ +   .+++++++||+.++++.....  .+...       .
T Consensus       152 ------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~--~~~~~~~~~~~~~  211 (262)
T PRK13394        152 ------------------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQ--IPEQAKELGISEE  211 (262)
T ss_pred             ------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhh--hHhhhhccCCChH
Confidence                              124679999999999888886 3   489999999999998853221  11100       0


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM--SG-RFFCTNV  272 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~g-~~n~~~~  272 (341)
                      .....+      +....      ..++|++++|++++++.++.....  .| .|++.++
T Consensus       212 ~~~~~~------~~~~~------~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        212 EVVKKV------MLGKT------VDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             HHHHHH------HhcCC------CCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            011111      11111      167899999999999999976432  35 6777654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=4.4e-23  Score=178.51  Aligned_cols=222  Identities=16%  Similarity=0.115  Sum_probs=159.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++|+||||||+|+||++|+++|+++|++|+++.| +... ..............+++++.+|+.+++.+.++++  
T Consensus         1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   78 (249)
T PRK12825          1 MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYR-SDEE-AAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAA   78 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CCHH-HHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHH
Confidence            66556689999999999999999999999999988777 5432 1111111112223578999999999998887764  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|+|||+|+......     .+.+...++.|+.++.++++.+    ++.+ .++||++||...+++..      
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~------  151 (249)
T PRK12825         79 VERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWP------  151 (249)
T ss_pred             HHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCC------
Confidence                 5799999999654322     3334678899999999999887    4555 78999999987554321      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.+|...+.+++.++ +   .+++++++||+.++++.....  .   ......
T Consensus       152 ----------------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--~---~~~~~~  204 (249)
T PRK12825        152 ----------------------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT--I---EEAREA  204 (249)
T ss_pred             ----------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc--c---chhHHh
Confidence                                  14679999999999988776 3   489999999999999864432  1   111111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .    ..   ...       ...+++.+|+++++.+++....  ..| +|+++++
T Consensus       205 ~----~~---~~~-------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g  245 (249)
T PRK12825        205 K----DA---ETP-------LGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGG  245 (249)
T ss_pred             h----hc---cCC-------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence            0    00   001       3448999999999999997643  345 7888765

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.92  E-value=6.8e-23  Score=177.76  Aligned_cols=228  Identities=19%  Similarity=0.241  Sum_probs=158.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHh-cCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAI-QGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~-~~~d~   82 (341)
                      .+|+||||||+|+||++++++|++.||+|++++| +..+.   ...  .+ ...+++++.+|+++ .+.+.+.+ .++|+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R-~~~~~---~~~--~~-~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~   88 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVR-DVDKA---KTS--LP-QDPSLQIVRADVTEGSDKLVEAIGDDSDA   88 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEec-CHHHH---HHh--cc-cCCceEEEEeeCCCCHHHHHHHhhcCCCE
Confidence            4689999999999999999999999999999999 65431   111  11 12368899999998 46777777 68999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |||+++.....  .+. ..++.|..++.++++++++.+ +++|||+||.++ |+...      ..+..+.. ..      
T Consensus        89 vi~~~g~~~~~--~~~-~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v-~g~~~------~~~~~~~~-~~------  150 (251)
T PLN00141         89 VICATGFRRSF--DPF-APWKVDNFGTVNLVEACRKAG-VTRFILVSSILV-NGAAM------GQILNPAY-IF------  150 (251)
T ss_pred             EEECCCCCcCC--CCC-CceeeehHHHHHHHHHHHHcC-CCEEEEEccccc-cCCCc------ccccCcch-hH------
Confidence            99998864321  111 345788999999999999988 899999999984 43211      11111110 00      


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL  242 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (341)
                        ..+...|..+|..+|++++   +.+++++++||+.+++......      .            .......     ...
T Consensus       151 --~~~~~~~~~~k~~~e~~l~---~~gi~~~iirpg~~~~~~~~~~------~------------~~~~~~~-----~~~  202 (251)
T PLN00141        151 --LNLFGLTLVAKLQAEKYIR---KSGINYTIVRPGGLTNDPPTGN------I------------VMEPEDT-----LYE  202 (251)
T ss_pred             --HHHHHHHHHHHHHHHHHHH---hcCCcEEEEECCCccCCCCCce------E------------EECCCCc-----ccc
Confidence              0112345567888888776   3479999999999998642211      0            0000000     033


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCc-eEEEecc----ccCHHHHHHHHHH
Q 019415          243 PLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV----FVSSAEIASCLQQ  285 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~----~~s~~e~~~~i~~  285 (341)
                      .+|+.+|+|+++..++..+...+ ++.+.+.    ..++.++...+++
T Consensus       203 ~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        203 GSISRDQVAEVAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             CcccHHHHHHHHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            57999999999999998776544 6766542    2689999888875

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.9e-22  Score=177.49  Aligned_cols=236  Identities=15%  Similarity=0.047  Sum_probs=167.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +++||||||+|+||+++++.|+++|++|++++| +...   .+.+...  ....+.++++|++|++.+.++++       
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r-~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATAR-DTAT---LADLAEK--YGDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHh--ccCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            368999999999999999999999999999999 6543   2222221  12468889999999988776654       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+||......     .+.++..+++|+.++..+++++    ++.+ .+++|++||..++.+...          
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~----------  145 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPM----------  145 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCCC----------
Confidence            5799999999765422     3456788999999998887775    4555 689999999875543211          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                        ...|+.+|...+.+.+.++ +   .|++++++||+.+..+................ .+.. 
T Consensus       146 ------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~-~~~~-  205 (275)
T PRK08263        146 ------------------SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYD-TLRE-  205 (275)
T ss_pred             ------------------ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhh-hHHH-
Confidence                              3679999999999888876 3   58999999999987764421100000000000 0000 


Q ss_pred             ccccccccchhhccCCCCc-ccHHHHHHHHHHhhcCCCCCceEEEecc--ccCHHHHHHHHHHh
Q 019415          226 EYVYQTLRDTEEILGKLPL-VHIDDVCEAHIFCMEKPSMSGRFFCTNV--FVSSAEIASCLQQN  286 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~~~g~~n~~~~--~~s~~e~~~~i~~~  286 (341)
                        .......      ...+ ++++|++++++.+++.+...+.|+++++  .+++.++.+.+.+.
T Consensus       206 --~~~~~~~------~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        206 --ELAEQWS------ERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             --HHHHHHH------hccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence              0000001      3345 8899999999999998777777766554  58889998888874

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.4e-23  Score=177.29  Aligned_cols=231  Identities=16%  Similarity=0.103  Sum_probs=158.0

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |...+++++|||||+|+||+++++.|+++|++|++++| +...  ..+.+ ..+......+.++.+|+++++++.++++ 
T Consensus         1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r-~~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (248)
T PRK07806          1 MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYR-QKAP--RANKVVAEIEAAGGRASAVGADLTDEESVAALMDT   77 (248)
T ss_pred             CCCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeC-CchH--hHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            55455689999999999999999999999999999999 6532  11111 1111122467899999999998877765 


Q ss_pred             ------CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                            ++|+|||+|+....... .+...+++|+.++.++++++...- ...++|++||....+..           ..+
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~-~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~  145 (248)
T PRK07806         78 AREEFGGLDALVLNASGGMESGM-DEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP-----------TVK  145 (248)
T ss_pred             HHHhCCCCcEEEECCCCCCCCCC-CcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc-----------ccc
Confidence                  58999999986432222 234778999999999999998652 13589999996532210           001


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                      ..            .....|+.+|..+|.+++.++ +   .++++++++|+.+-++....          +.......  
T Consensus       146 ~~------------~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~----------~~~~~~~~--  201 (248)
T PRK07806        146 TM------------PEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT----------LLNRLNPG--  201 (248)
T ss_pred             CC------------ccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh----------hhccCCHH--
Confidence            00            114689999999999999886 3   48999999988776652211          10000000  


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEeccccC
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVFVS  275 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~~s  275 (341)
                      ......     .....+++++|+++++..+++.....| +|+++++...
T Consensus       202 ~~~~~~-----~~~~~~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        202 AIEARR-----EAAGKLYTVSEFAAEVARAVTAPVPSGHIEYVGGADYF  245 (248)
T ss_pred             HHHHHH-----hhhcccCCHHHHHHHHHHHhhccccCccEEEecCccce
Confidence            000000     003469999999999999998765666 7899887643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=8.8e-23  Score=177.82  Aligned_cols=223  Identities=17%  Similarity=0.116  Sum_probs=154.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +++||||||+|+||++++++|+++|++|++++| +.........  .+......++++.+|+.+++.+.++++       
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGAKVVIADL-NDEAAAAAAE--ALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            479999999999999999999999999999999 7654332221  111123478899999999998877765       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHH----HHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKI----ASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+|+......     .+.++..++.|+.++.++    +.++++.+ .++||++||...+++..           
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~-----------  148 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSA-----------  148 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCC-----------
Confidence            5899999999654432     333456788999995544    45555566 78999999987555322           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh-c
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT-N  224 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~  224 (341)
                                       ..+.|+.+|...+.+.+.++ +   .++++.++||+.++++.....      ......... .
T Consensus       149 -----------------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~------~~~~~~~~~~~  205 (258)
T PRK12429        149 -----------------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ------IPDLAKERGIS  205 (258)
T ss_pred             -----------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh------hhhhccccCCC
Confidence                             24689999999998888775 2   489999999999998754322      100000000 0


Q ss_pred             C----ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 N----EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~----~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .    ...+....      ..+.+++++|+|+++..++....  ..| .|++.++
T Consensus       206 ~~~~~~~~~~~~~------~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        206 EEEVLEDVLLPLV------PQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             hHHHHHHHHhccC------CccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            0    00111111      15679999999999999987543  335 6777654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.91  E-value=3e-22  Score=173.65  Aligned_cols=225  Identities=14%  Similarity=0.084  Sum_probs=160.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++|+||||||+|+||.++++.|+++|++|++++| +..+...  ....+......+.++.+|+.|++.+.++++  
T Consensus         1 ~~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r-~~~~~~~--~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12826          1 TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDI-CGDDAAA--TAELVEAAGGKARARQVDVRDRAALKAAVAAG   77 (251)
T ss_pred             CCCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHH--HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            33345689999999999999999999999999999999 7543221  111111222468899999999998888775  


Q ss_pred             -----CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccc-cCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCA-SPLKEDGSA  143 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~-~~~~~~~~~  143 (341)
                           ++|+|||+++.....     ..+.+...++.|+.++.++++++.    +.+ .++||++||.... .+.      
T Consensus        78 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~------  150 (251)
T PRK12826         78 VEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVGY------  150 (251)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccCC------
Confidence                 689999999876642     134556789999999999998874    445 6899999998643 111      


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                            .....|+.+|..++.+++.++ +   .+++++++||+.++|+.....  .+..   +.
T Consensus       151 ----------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~---~~  203 (251)
T PRK12826        151 ----------------------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL--GDAQ---WA  203 (251)
T ss_pred             ----------------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc--CchH---HH
Confidence                                  124679999999999998876 3   489999999999999865433  1111   01


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccccC
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVFVS  275 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~~s  275 (341)
                      ..+....    +         ...+++++|+|.++..++....  ..| +|++.++..+
T Consensus       204 ~~~~~~~----~---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~  249 (251)
T PRK12826        204 EAIAAAI----P---------LGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGGATL  249 (251)
T ss_pred             HHHHhcC----C---------CCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence            1111110    0         2358899999999999886543  245 7888776543

>PRK09135 pteridine reductase; Provisional

Probab=99.91  E-value=4.4e-22  Score=172.41  Aligned_cols=224  Identities=15%  Similarity=0.134  Sum_probs=152.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhh-hCCC-CCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLK-SLPG-AETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |...+.++||||||+|+||++++++|+++|++|++++| +...  ..+.+. .+.. ....+.++.+|+++.+.+.++++
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r-~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   77 (249)
T PRK09135          1 MMTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYH-RSAA--EADALAAELNALRPGSAAALQADLLDPDALPELVA   77 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC-CCHH--HHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence            44445689999999999999999999999999999998 6432  111111 1111 12368899999999998887776


Q ss_pred             -------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                             ++|+|||+|+.....     ..+.++..+++|+.++.++++++...  ..-..++++++.....         
T Consensus        78 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------  148 (249)
T PRK09135         78 ACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAER---------  148 (249)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcC---------
Confidence                   479999999964321     13345688999999999999998642  1124566666533111         


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                         +                ..+...|+.+|..+|.+++.++ +.  +++++++||+.++|+.....  .   ...+...
T Consensus       149 ---~----------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~--~---~~~~~~~  204 (249)
T PRK09135        149 ---P----------------LKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNS--F---DEEARQA  204 (249)
T ss_pred             ---C----------------CCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccccc--C---CHHHHHH
Confidence               0                1235789999999999999987 43  69999999999999975432  1   1122222


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC-CCCc-eEEEeccc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP-SMSG-RFFCTNVF  273 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~g-~~n~~~~~  273 (341)
                      ......             ...+.+++|+|+++..++... ...| +||++++.
T Consensus       205 ~~~~~~-------------~~~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~  245 (249)
T PRK09135        205 ILARTP-------------LKRIGTPEDIAEAVRFLLADASFITGQILAVDGGR  245 (249)
T ss_pred             HHhcCC-------------cCCCcCHHHHHHHHHHHcCccccccCcEEEECCCe
Confidence            211111             122345899999996666433 2345 89998754

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.8e-22  Score=175.42  Aligned_cols=221  Identities=14%  Similarity=0.144  Sum_probs=154.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++.+|||||+|+||+++++.|+++|++|++++| +.......  ...+......++++.+|+++++.+.++++      
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGAR-RVEKCEEL--VDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3468999999999999999999999999999998 65432221  11111222468889999999998887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++++++.    +.+ ..+||++||...+.+..          
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~----------  154 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRP----------  154 (274)
T ss_pred             CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC----------
Confidence             5799999999754322     23445778999999999988875    333 56899999986443211          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...|.+++.++ +   .|++++++|||.+.++.....  .+.....+..... 
T Consensus       155 ------------------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~--~~~~~~~~~~~~~-  213 (274)
T PRK07775        155 ------------------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSL--PAEVIGPMLEDWA-  213 (274)
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccC--ChhhhhHHHHHHH-
Confidence                              14679999999999999886 3   389999999998765522111  0111111111110 


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEe
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCT  270 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~  270 (341)
                         ... ...      .+.+++++|+|++++.+++++....+||+.
T Consensus       214 ---~~~-~~~------~~~~~~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        214 ---KWG-QAR------HDYFLRASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             ---Hhc-ccc------cccccCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence               001 111      566999999999999999876444478875

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.90  E-value=9.1e-23  Score=177.41  Aligned_cols=222  Identities=17%  Similarity=0.127  Sum_probs=153.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh-------cC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI-------QG   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~   79 (341)
                      ++||||||+|+||+++++.|+++|++|++++| +......+.....  .....++++.+|+.+++++.+++       .+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDL-GEAGAEAAAKVAT--DAGGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHH--hcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999999999 7543222222111  12246889999999998665544       45


Q ss_pred             CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +|+|||+|+......     ...++..++.|+.++..+++++    ++.+ .++|||+||...+.+...           
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~-----------  146 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASPF-----------  146 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCCC-----------
Confidence            899999999755322     3334577889999988888776    4555 789999999764442211           


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH-hcC
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL-TNN  225 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~  225 (341)
                                       ...|+.+|...+.+++.++ +   .+++++++||+.++++.....      ........ ...
T Consensus       147 -----------------~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~------~~~~~~~~~~~~  203 (255)
T TIGR01963       147 -----------------KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQ------IADQAKTRGIPE  203 (255)
T ss_pred             -----------------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHH------HHhhhcccCCCc
Confidence                             3679999999998888776 3   389999999999998742211      10000000 000


Q ss_pred             c----cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          226 E----YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       226 ~----~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .    ..+....      ..+++++++|+|++++.++....  ..| .|+++++
T Consensus       204 ~~~~~~~~~~~~------~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g  251 (255)
T TIGR01963       204 EQVIREVMLPGQ------PTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGG  251 (255)
T ss_pred             hHHHHHHHHccC------ccccCcCHHHHHHHHHHHcCccccCccceEEEEcCc
Confidence            0    0011111      26789999999999999997642  234 7888764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.3e-22  Score=176.43  Aligned_cols=229  Identities=17%  Similarity=0.098  Sum_probs=158.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++++|||||+|+||+++++.|+++|++|++++| +...................++++.+|++|++.+++ ++       
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMR-NPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            368999999999999999999999999999999 765433332222211223478999999999987765 42       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+|+......     .+.++..+++|+.++.++++++    ++.+ ..+||++||....++..           
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~-----------  148 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFP-----------  148 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCC-----------
Confidence            5799999998755322     2345577889999998888885    5555 68999999976555322           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCC-------Cchhhhh
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSST-------PVSVIGG  218 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~-------~~~~~~~  218 (341)
                                       +...|+.+|...+.+++.++    ..|++++++|||.+.++........       .......
T Consensus       149 -----------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  211 (280)
T PRK06914        149 -----------------GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEY  211 (280)
T ss_pred             -----------------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHH
Confidence                             24689999999999888875    3489999999999988743221000       0000001


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCH
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSS  276 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~  276 (341)
                      ...+...   ...        ....+++++|+|+++..+++++.....|+++++ .+++
T Consensus       212 ~~~~~~~---~~~--------~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (280)
T PRK06914        212 MKKIQKH---INS--------GSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMI  259 (280)
T ss_pred             HHHHHHH---Hhh--------hhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHH
Confidence            1111000   000        044578999999999999998776667888753 3443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.90  E-value=2.9e-22  Score=181.28  Aligned_cols=271  Identities=14%  Similarity=0.152  Sum_probs=192.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC---CeEEEEecCCCCchhhhhHhh-------------hCCCCCCceEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG---YIVHTTLRPNLEDKSKVDLLK-------------SLPGAETRLIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~Dl~   68 (341)
                      .+++|||||||||+|..+++.|+..-   .+++.+.| ....+..-+++.             ..+....++..+.||+.
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR-~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIR-AKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEe-cCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            46899999999999999999999873   47888888 544433333322             22344578999999998


Q ss_pred             Ch------HHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCC
Q 019415           69 DP------DTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        69 ~~------~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                      ++      .+++.+.+.+|+|||+||...+.+.  ++.....|+.|+.++++.|++..+.+-|+|+||+.+........ 
T Consensus        90 ~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~--l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~-  166 (467)
T KOG1221|consen   90 EPDLGISESDLRTLADEVNIVIHSAATVRFDEP--LDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIE-  166 (467)
T ss_pred             CcccCCChHHHHHHHhcCCEEEEeeeeeccchh--hhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccc-
Confidence            75      4666677889999999999998754  56788999999999999999998899999999997553222211 


Q ss_pred             CCCCCCCCCCCCCCCC------CC----------CccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCC
Q 019415          143 AGYKDSIDETCYTPPD------HP----------LTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNL  206 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~------~~----------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~  206 (341)
                         +.++.+...++++      ..          ..+...+.+.|..+|+.+|.++...+ .+++++|+||+.|......
T Consensus       167 ---E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-~~lPivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  167 ---EKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-ENLPLVIIRPSIITSTYKE  242 (467)
T ss_pred             ---ccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-cCCCeEEEcCCceeccccC
Confidence               3333333322221      00          11134467899999999999999886 3699999999999998776


Q ss_pred             CCCCCCchhhhhHhhH---hcCc-cccccccchhhccCCCCcccHHHHHHHHHHhhcC----CCC--CceEEEecc---c
Q 019415          207 PYSSTPVSVIGGLCQL---TNNE-YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK----PSM--SGRFFCTNV---F  273 (341)
Q Consensus       207 ~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~----~~~--~g~~n~~~~---~  273 (341)
                      +   .+.|+..+....   .... ..+.  ....+.....|+|.||.|+++++.+...    .+.  .-+||+++.   +
T Consensus       243 P---~pGWidn~~gp~g~i~g~gkGvlr--~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np  317 (467)
T KOG1221|consen  243 P---FPGWIDNLNGPDGVIIGYGKGVLR--CFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNP  317 (467)
T ss_pred             C---CCCccccCCCCceEEEEeccceEE--EEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCc
Confidence            6   466766654221   1100 0110  1122334499999999999999976632    111  228999874   3


Q ss_pred             cCHHHHHHHHHHhCC
Q 019415          274 VSSAEIASCLQQNYP  288 (341)
Q Consensus       274 ~s~~e~~~~i~~~~~  288 (341)
                      +++.++.+...+.+.
T Consensus       318 ~t~~~~~e~~~~~~~  332 (467)
T KOG1221|consen  318 VTWGDFIELALRYFE  332 (467)
T ss_pred             ccHHHHHHHHHHhcc
Confidence            899999999998874

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=1.2e-21  Score=182.63  Aligned_cols=235  Identities=16%  Similarity=0.116  Sum_probs=162.2

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhC----CC--CCCceEEEecCCCChHHHHH
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSL----PG--AETRLIFFEAEIYDPDTFEN   75 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~----~~--~~~~~~~~~~Dl~~~~~~~~   75 (341)
                      .+++++||||||+|+||++++++|++.|++|++++| +......+. .+...    .+  ...+++++.+|+.+.+++.+
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~R-n~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~  155 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP  155 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence            345678999999999999999999999999999999 765432221 11110    01  11358899999999999999


Q ss_pred             HhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCC
Q 019415           76 AIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYT  155 (341)
Q Consensus        76 ~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~  155 (341)
                      ++.++|+|||++|...... ..+...+++|+.++.+++++|.+.+ +++||++||.++...           ...+..  
T Consensus       156 aLggiDiVVn~AG~~~~~v-~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~-----------g~p~~~--  220 (576)
T PLN03209        156 ALGNASVVICCIGASEKEV-FDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKV-----------GFPAAI--  220 (576)
T ss_pred             HhcCCCEEEEccccccccc-cchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhccc-----------Cccccc--
Confidence            9999999999998754221 1234678899999999999999998 999999999874210           000000  


Q ss_pred             CCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccch
Q 019415          156 PPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDT  235 (341)
Q Consensus       156 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (341)
                       .        .....|...|..+|+.+.   +.|+++++||||.++++.+...  ..   ..+ ......       .. 
T Consensus       221 -~--------~sk~~~~~~KraaE~~L~---~sGIrvTIVRPG~L~tp~d~~~--~t---~~v-~~~~~d-------~~-  274 (576)
T PLN03209        221 -L--------NLFWGVLCWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYK--ET---HNL-TLSEED-------TL-  274 (576)
T ss_pred             -h--------hhHHHHHHHHHHHHHHHH---HcCCCEEEEECCeecCCccccc--cc---cce-eecccc-------cc-
Confidence             0        124678889999998887   4589999999999987743321  00   000 000000       00 


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCC-CCc-eEEEeccc----cCHHHHHHHHH
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPS-MSG-RFFCTNVF----VSSAEIASCLQ  284 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g-~~n~~~~~----~s~~e~~~~i~  284 (341)
                           ....+...|||++++.++.+.. ..+ +|.+.++.    -++.+++..+-
T Consensus       275 -----~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ip  324 (576)
T PLN03209        275 -----FGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKIP  324 (576)
T ss_pred             -----CCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhcc
Confidence                 2235789999999999998664 334 78777654    35555554443

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.90  E-value=9.8e-22  Score=173.09  Aligned_cols=226  Identities=15%  Similarity=0.029  Sum_probs=155.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +++||||||+|+||+++++.|+++|++|++++| +..+   ...+...  ....+.++.+|+++++.+.++++       
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~---~~~l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVR-SEAA---RADFEAL--HPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeC-CHHH---HHHHHhh--cCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999 6543   2222221  12367889999999988877765       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+||......     .+.++..+++|+.++.++++++.    +.+ .+++|++||.....+..           
T Consensus        78 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~-----------  145 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMP-----------  145 (277)
T ss_pred             CCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCC-----------
Confidence            4899999999754322     33456779999999999999853    344 57999999987544221           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCC-CCchhhhhHhhHhc
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSS-TPVSVIGGLCQLTN  224 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~  224 (341)
                                       +...|+.+|...|.+++.++ +   .|++++++||+.+.++....... ..............
T Consensus       146 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  208 (277)
T PRK06180        146 -----------------GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGP  208 (277)
T ss_pred             -----------------CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHH
Confidence                             24689999999999888876 3   48999999999998764332100 00111111111100


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~  273 (341)
                      ....... ..      ...+..++|+|+++..++..+.....|.++...
T Consensus       209 ~~~~~~~-~~------~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~  250 (277)
T PRK06180        209 IRQAREA-KS------GKQPGDPAKAAQAILAAVESDEPPLHLLLGSDA  250 (277)
T ss_pred             HHHHHHh-hc------cCCCCCHHHHHHHHHHHHcCCCCCeeEeccHHH
Confidence            0000000 00      344678999999999999876655566665543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.89  E-value=1.7e-21  Score=168.62  Aligned_cols=223  Identities=13%  Similarity=0.120  Sum_probs=157.8

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-   79 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   79 (341)
                      |...+++++|||||+|+||+++++.|+++|++|+++.+ +... ...+....+.....++.++.+|+++++.+.++++. 
T Consensus         1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (247)
T PRK12935          1 MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYN-SSKE-AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEA   78 (247)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcC-CcHH-HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            45445689999999999999999999999999987655 3321 11122222222234689999999999888877764 


Q ss_pred             ------CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCC
Q 019415           80 ------CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        80 ------~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                            +|+|||+|+......     ...++..+++|+.++.++++++..    .+ ..++|++||..+..+..      
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------  151 (247)
T PRK12935         79 VNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGF------  151 (247)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCCC------
Confidence                  799999999755432     245678899999999999999864    33 46999999976544221      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            +...|+.+|...+.+++.+. +   .++++++++|+.+.++.....      ......
T Consensus       152 ----------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~------~~~~~~  203 (247)
T PRK12935        152 ----------------------GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV------PEEVRQ  203 (247)
T ss_pred             ----------------------CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc------cHHHHH
Confidence                                  14689999999988887776 3   389999999999976532211      111111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-CCc-eEEEeccc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MSG-RFFCTNVF  273 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g-~~n~~~~~  273 (341)
                      .....       ..      .+.+.+++|++++++.+++... ..| .||+.++.
T Consensus       204 ~~~~~-------~~------~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        204 KIVAK-------IP------KKRFGQADEIAKGVVYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             HHHHh-------CC------CCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence            11111       11      5668999999999999987542 234 88887763

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.6e-21  Score=170.03  Aligned_cols=239  Identities=15%  Similarity=0.070  Sum_probs=158.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|+||+++++.|++.|++|++++| +.+.....  ...+......+.++.+|++|++++.++++  
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r-~~~~l~~~--~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   77 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDV-DKPGLRQA--VNHLRAEGFDVHGVMCDVRHREEVTHLADEA   77 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            66667789999999999999999999999999999998 65432221  12222223368889999999988887765  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||+||......     .+.++..+++|+.++.++++++.    +.+...++|++||...+.+..      
T Consensus        78 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~------  151 (275)
T PRK05876         78 FRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA------  151 (275)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC------
Confidence                 4799999999743221     34456788999999999988874    333236899999987544221      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            +...|+.+|...+.+.+.++    ..|+++++++|+.+.++.....   .. .. ...
T Consensus       152 ----------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~-~~-~~~  204 (275)
T PRK05876        152 ----------------------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS---ER-IR-GAA  204 (275)
T ss_pred             ----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccch---hh-hc-Ccc
Confidence                                  24689999997555444443    4589999999999977643221   00 00 000


Q ss_pred             hHhcCc-cccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHH
Q 019415          221 QLTNNE-YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQ  285 (341)
Q Consensus       221 ~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~  285 (341)
                      ...... ...+....      .+++++++|+|++++.++.+..   .|.+. +.....++.+...+
T Consensus       205 ~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~ai~~~~---~~~~~-~~~~~~~~~~~~~~  260 (275)
T PRK05876        205 CAQSSTTGSPGPLPL------QDDNLGVDDIAQLTADAILANR---LYVLP-HAASRASIRRRFER  260 (275)
T ss_pred             ccccccccccccccc------cccCCCHHHHHHHHHHHHHcCC---eEEec-ChhhHHHHHHHHHH
Confidence            000000 11111112      5678999999999999997532   34443 34444444444443

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.89  E-value=2.1e-21  Score=167.78  Aligned_cols=218  Identities=15%  Similarity=0.099  Sum_probs=156.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +........  ..+......++++.+|+.|++.+.++++      
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDS-NEEAAEALA--AELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHH--HHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999999 754322211  1111223468899999999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       .+|+|||+|+......     .+.++..++.|+.+..++++++.    +.+ .++||++||....++..          
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~~----------  149 (246)
T PRK05653         81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGNP----------  149 (246)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCCC----------
Confidence             3699999998755422     33345778999999999988884    455 68999999986544221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        +...|+.+|...|..++.++ +   .+++++++||+.++++.....      ..........
T Consensus       150 ------------------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~------~~~~~~~~~~  205 (246)
T PRK05653        150 ------------------GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL------PEEVKAEILK  205 (246)
T ss_pred             ------------------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh------hHHHHHHHHh
Confidence                              24679999999998888876 2   489999999999999854321      1111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ..    .         ...+++++|+++++..++....  ..| .|+++++.
T Consensus       206 ~~----~---------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        206 EI----P---------LGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             cC----C---------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            10    0         4567889999999999987532  234 77887753

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.7e-21  Score=167.54  Aligned_cols=230  Identities=17%  Similarity=0.130  Sum_probs=163.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++++|||||+|+||+++++.|+++|++|++++| +.......  ...+.  ...++++.+|+.+++.+.++++       
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r-~~~~~~~~--~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDI-DAAALAAF--ADALG--DARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            368999999999999999999999999999999 75432211  12221  2368899999999998887775       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+++......     .+.+...+++|+.++.++++++.    +.+ ..++|++||.......            
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------------  143 (257)
T PRK07074         77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAAL------------  143 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCC------------
Confidence            4899999999754322     23345667899999999888873    344 5789999996532110            


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       ....|+.+|...+.+++.++ +   .|+++.++||+.+.++.....  ... ...+.......
T Consensus       144 -----------------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~~~-~~~~~~~~~~~  203 (257)
T PRK07074        144 -----------------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEAR--VAA-NPQVFEELKKW  203 (257)
T ss_pred             -----------------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcc--ccc-ChHHHHHHHhc
Confidence                             02469999999999999987 3   379999999999988753221  000 11111111110


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc-cCHHHHHHHHHHh
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF-VSSAEIASCLQQN  286 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~-~s~~e~~~~i~~~  286 (341)
                                   ....+|++++|+++++..++...  ...| .+++.++. .+..||.+.+.+.
T Consensus       204 -------------~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        204 -------------YPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             -------------CCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence                         01568999999999999999753  2346 55676654 7799999988754

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.4e-21  Score=169.62  Aligned_cols=234  Identities=15%  Similarity=0.158  Sum_probs=163.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++||||||+|+||+++++.|+++|++|++++| +....... +.+.... ....+.++.+|+++++.+.++++      
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGR-NPDKLAAAAEEIEALK-GAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHhcc-CCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            589999999999999999999999999999999 65432211 2222111 12468899999999988887776      


Q ss_pred             -CCCEEEEeccCCcc------ccchhHhHhhhhhhhHHHHHHHHHHhcC---CcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQH------IDGYLYKNVVEACVGAAKKIASFCVKSG---TVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+....      ...+.+...+++|+.++.++++++.+..   ...+||++||.....+.           
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  153 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH-----------  153 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----------
Confidence             68999999986432      1133456788999999999988775532   13589999998743211           


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .+...|+.+|...|.+++.++ +   .+++++++||+.+.++.....  ..  ..........
T Consensus       154 -----------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~--~~--~~~~~~~~~~  212 (276)
T PRK05875        154 -----------------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI--TE--SPELSADYRA  212 (276)
T ss_pred             -----------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc--cc--CHHHHHHHHc
Confidence                             124789999999999999887 3   379999999999876643221  00  0011111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC--Cc-eEEEeccc-c----CHHHHHHHHHHh
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM--SG-RFFCTNVF-V----SSAEIASCLQQN  286 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~g-~~n~~~~~-~----s~~e~~~~i~~~  286 (341)
                      ..       .      ...+++++|+++++.+++..+..  .| ++++.++. +    +..|+++.+.+.
T Consensus       213 ~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~  269 (276)
T PRK05875        213 CT-------P------LPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGA  269 (276)
T ss_pred             CC-------C------CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhH
Confidence            00       0      33467899999999999986543  35 78887754 3    777777766644

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.9e-21  Score=167.88  Aligned_cols=224  Identities=16%  Similarity=0.118  Sum_probs=155.0

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |...++++|+||||+|+||+++++.|+++|++|.++ .| +...  .......+......++++.+|++|++++.++++ 
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r-~~~~--~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~   77 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGR-NKQA--ADETIREIESNGGKAFLIEADLNSIDGVKKLVEQ   77 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHH--HHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHH
Confidence            554456899999999999999999999999999875 45 4422  111222222222468899999999998887766 


Q ss_pred             ------------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCC
Q 019415           79 ------------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        79 ------------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~  140 (341)
                                  ++|+|||+||......     .+.++..+++|+.++.++++++... ....++|++||..++.+..  
T Consensus        78 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~--  155 (254)
T PRK12746         78 LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT--  155 (254)
T ss_pred             HHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC--
Confidence                        4899999999754422     3334677889999999999998764 1135899999987543221  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                                ....|+.+|.+.|.+++.++ +   .++++++++|+.+.++.....  .+.  .
T Consensus       156 --------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~--~  205 (254)
T PRK12746        156 --------------------------GSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL--LDD--P  205 (254)
T ss_pred             --------------------------CCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh--ccC--h
Confidence                                      14679999999999888776 2   489999999999988743221  000  1


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .+....... .      .      ...+++++|+++++..++....  ..| .|++.++
T Consensus       206 ~~~~~~~~~-~------~------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        206 EIRNFATNS-S------V------FGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             hHHHHHHhc-C------C------cCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            111111111 0      0      3457789999999998887543  234 7888765

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=2.7e-21  Score=167.88  Aligned_cols=228  Identities=15%  Similarity=0.052  Sum_probs=156.2

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++++||||||+|+||++++++|+++|++|++..| +... .....+..+......+.++.+|+++++++..+++  
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAK-KRAE-EMNETLKMVKENGGEGIGVLADVSTREGCETLAKAT   78 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CChH-HHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHH
Confidence            43334689999999999999999999999999988776 3321 1111122221222357789999999988777665  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                           ++|+|||+||......     ...++..+++|+.+..++++++.+.- ...+||++||..++.+.          
T Consensus        79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  148 (252)
T PRK06077         79 IDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA----------  148 (252)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC----------
Confidence                 5799999999644322     22235778999999999999887642 12589999998743321          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        .+.+.|+.+|...|.+++.++ +.  ++++.+++|+.+.++.....   .............
T Consensus       149 ------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~---~~~~~~~~~~~~~  207 (252)
T PRK06077        149 ------------------YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESL---FKVLGMSEKEFAE  207 (252)
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhh---hhcccccHHHHHH
Confidence                              125789999999999999887 43  79999999999977642211   0000000000000


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~  273 (341)
                            ....      ...+++++|+|+++..++..+...| +|++.++.
T Consensus       208 ------~~~~------~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g~  245 (252)
T PRK06077        208 ------KFTL------MGKILDPEEVAEFVAAILKIESITGQVFVLDSGE  245 (252)
T ss_pred             ------hcCc------CCCCCCHHHHHHHHHHHhCccccCCCeEEecCCe
Confidence                  0000      3468999999999999997665545 88887764

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.89  E-value=7.4e-22  Score=171.97  Aligned_cols=231  Identities=15%  Similarity=0.069  Sum_probs=159.6

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |....++++|||||+|+||.++++.|+++|++|++++| +........  ..+   ...+.++.+|+++++.+.++++  
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~   74 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADI-KPARARLAA--LEI---GPAAIAVSLDVTRQDSIDRIVAAA   74 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcC-CHHHHHHHH--HHh---CCceEEEEccCCCHHHHHHHHHHH
Confidence            45445689999999999999999999999999999999 764322211  111   2358899999999988887765  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC----CcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG----TVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||+|+......     .+.++..+++|+.++.++++++....    .-.++|++||....++..      
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------  148 (257)
T PRK07067         75 VERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA------  148 (257)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC------
Confidence                 5899999999754321     34567889999999999999986431    125899999976444221      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            +...|+.+|...+.+.+.++    ..|+++++++|+.++++.....      ...+ .
T Consensus       149 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~------~~~~-~  199 (257)
T PRK07067        149 ----------------------LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQV------DALF-A  199 (257)
T ss_pred             ----------------------CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhh------hhhh-h
Confidence                                  24689999999999888776    3589999999999998743221      0000 0


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ....... -........+.....+++++|+|+++..++....  ..| +|++.++.
T Consensus       200 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  254 (257)
T PRK07067        200 RYENRPP-GEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGN  254 (257)
T ss_pred             hccCCCH-HHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCE
Confidence            0000000 0000000011115679999999999999997643  234 88887753

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=4.3e-21  Score=166.99  Aligned_cols=218  Identities=15%  Similarity=0.133  Sum_probs=154.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      |+||||||+|+||+++++.|+++|++|++++| +.... .......+......+.++.+|+++++++.++++       .
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r-~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDR-PDDEE-LAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEec-CchhH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999999988 64321 111111111122468899999999988777654       5


Q ss_pred             CCEEEEeccCCccc-------cchhHhHhhhhhhhHHHHHHHHHHhc----CC-----cCEEEEecccccccCCCCCCCC
Q 019415           80 CDFVFHVATPLQHI-------DGYLYKNVVEACVGAAKKIASFCVKS----GT-----VKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~-----~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                      +|+|||+||.....       ..+.++..+++|+.++.++++++...    ..     ..+||++||..+.++...    
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----  156 (256)
T PRK12745         81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN----  156 (256)
T ss_pred             CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCC----
Confidence            79999999875321       13456788999999999998887543    11     467999999875553221    


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                              ...|+.+|.+.|.+++.++ +   .|++++++||+.+.++.....      ...+.
T Consensus       157 ------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~------~~~~~  206 (256)
T PRK12745        157 ------------------------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV------TAKYD  206 (256)
T ss_pred             ------------------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc------chhHH
Confidence                                    4689999999999999887 3   589999999999988753322      11221


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ........      .      ...+.++.|+++++..++....  ..| .|++.++
T Consensus       207 ~~~~~~~~------~------~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        207 ALIAKGLV------P------MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             hhhhhcCC------C------cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCC
Confidence            11111100      0      4457799999999999886432  234 7888765

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.9e-21  Score=169.96  Aligned_cols=227  Identities=19%  Similarity=0.181  Sum_probs=153.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +.+++|||||+|+||+++++.|+++|++|++++| +.+......  ...+.  ..+.++.+|++|++.+.++++      
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~--~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDV-SEAALAATA--ARLPG--AKVTATVADVADPAQVERVFDTAVERF   84 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHhc--CceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999 654322111  11111  156889999999988877664      


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHH----hcCCc-CEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCV----KSGTV-KRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~-~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ++|+|||+|+.....      ..+.+...++.|+.++.++++++.    ..+ . ++|+++||.....+...       
T Consensus        85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~~~~-------  156 (264)
T PRK12829         85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLGYPG-------  156 (264)
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccCCCC-------
Confidence             689999999976221      134456889999999999988873    333 4 67888888654332211       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                           ...|+.+|...|.+++.++ +   .+++++++||+.++++.....      ........
T Consensus       157 ---------------------~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~------~~~~~~~~  209 (264)
T PRK12829        157 ---------------------RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV------IEARAQQL  209 (264)
T ss_pred             ---------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH------hhhhhhcc
Confidence                                 3579999999999999886 3   389999999999999854321      11000000


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ..........  .........+++++|+++++..++...  ...| .|+++++.
T Consensus       210 ~~~~~~~~~~--~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        210 GIGLDEMEQE--YLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             CCChhHHHHH--HHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence            0000000000  000001446899999999999888642  2345 77887753

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.88  E-value=1.1e-21  Score=158.74  Aligned_cols=292  Identities=14%  Similarity=0.136  Sum_probs=215.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCe-EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYI-VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   81 (341)
                      ..|||||||-|.+|..++..|..+ |.+ |+..+- ....   ...+       ..-.++..|+.|...++++.-  ++|
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI-~KPp---~~V~-------~~GPyIy~DILD~K~L~eIVVn~RId  112 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDI-VKPP---ANVT-------DVGPYIYLDILDQKSLEEIVVNKRID  112 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhc-cCCc---hhhc-------ccCCchhhhhhccccHHHhhcccccc
Confidence            469999999999999999988876 644 555322 1111   0111       123477889999888888873  689


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      -.||+.+..+.-.+.......++|++|..|+++.|++++  -++...|+.+++++..+      ..|-..-.        
T Consensus       113 WL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k--L~iFVPSTIGAFGPtSP------RNPTPdlt--------  176 (366)
T KOG2774|consen  113 WLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK--LKVFVPSTIGAFGPTSP------RNPTPDLT--------  176 (366)
T ss_pred             eeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC--eeEeecccccccCCCCC------CCCCCCee--------
Confidence            999998865433222233778999999999999999998  45667888887776544      22222222        


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhcc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEIL  239 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  239 (341)
                        .+.|.+.||.||.-+|.+-..+. ..|+++-.+|.+.+......+.+.....+..+...+.++. ..+-.++.     
T Consensus       177 --IQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdt-----  249 (366)
T KOG2774|consen  177 --IQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDT-----  249 (366)
T ss_pred             --eecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCc-----
Confidence              45778999999999998887776 6699999999998888654444334455666777766665 44444444     


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCC---CceEEEeccccCHHHHHHHHHHhCCCCccccCc----CCCCcceEeecchhhh
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSM---SGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY----LDVPKREIKWGGTKLE  312 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~---~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~----~~~~~~~~~~d~~k~~  312 (341)
                       +.++.|..||.++++.++..++.   ..+||+++-..|.+|+++.+.+..|...+....    .-.+.+...+|.+.++
T Consensus       250 -rlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar  328 (366)
T KOG2774|consen  250 -RLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEAR  328 (366)
T ss_pred             -cCceeehHHHHHHHHHHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHh
Confidence             99999999999999998876542   349999999999999999999999987665542    2347788899999997


Q ss_pred             h-cCCcccccHHHHHHHHHHH
Q 019415          313 E-KGFEYNYDLKMILDDSIKC  332 (341)
Q Consensus       313 ~-lg~~~~~~~~~~l~~~~~~  332 (341)
                      . +.|+-...+...+.-++..
T Consensus       329 ~~wh~~h~~~l~~~i~~~i~~  349 (366)
T KOG2774|consen  329 TEWHEKHSLHLLSIISTVVAV  349 (366)
T ss_pred             hHHHHhhhhhHHHHHHHHHHH
Confidence            6 8888887777766666643

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.5e-20  Score=162.85  Aligned_cols=221  Identities=16%  Similarity=0.124  Sum_probs=156.6

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |...++|+||||||+|+||+++++.|+++|++|+++.| ...+ .+....+ .........++++.+|+.+++.+.++++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          1 MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI-HPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             CCCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC-cccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            44445689999999999999999999999999999876 4332 1222222 1122223478899999999988887764


Q ss_pred             -------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH-----hcCCcCEEEEecccccccCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV-----KSGTVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                             ++|+|||+||......     .+.+...+++|+.++.++++++.     +.+ .+++|++||...+++...  
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~--  156 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNRG--  156 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCCC--
Confidence                   5899999999765221     33456788999999999999998     444 689999999876553221  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                                ...|+.+|...+.+++.++ +   .+++++++||+.+.++.....     ... 
T Consensus       157 --------------------------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~-----~~~-  204 (249)
T PRK12827        157 --------------------------QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA-----APT-  204 (249)
T ss_pred             --------------------------CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc-----chH-
Confidence                                      4679999999999888876 3   389999999999998754332     010 


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                        .......      .       ...+.+.+|+++++..++....  ..| .+++.++
T Consensus       205 --~~~~~~~------~-------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        205 --EHLLNPV------P-------VQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             --HHHHhhC------C-------CcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence              1111110      0       2234578999999999886532  235 5566543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=5.9e-21  Score=166.10  Aligned_cols=219  Identities=17%  Similarity=0.151  Sum_probs=156.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +......  ....+...+..+.++.+|++|++.+.++++      
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r-~~~~~~~--~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGR-DPAKLAA--AAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeC-CHHHHHH--HHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4589999999999999999999999999999999 7543221  112222223458889999999988888775      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       .+|+|||+|+......     .+.++..+.+|+.++.++++++.+.    + .+++|++||.....+.           
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~-----------  153 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALAR-----------  153 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCC-----------
Confidence             4799999999754322     3445678889999999999988754    4 5799999997633211           


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .....|+.+|...|.+++.++ +   +|+++.++||+.+.++.....  ..  ...+...+..
T Consensus       154 -----------------~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~--~~--~~~~~~~~~~  212 (255)
T PRK07523        154 -----------------PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL--VA--DPEFSAWLEK  212 (255)
T ss_pred             -----------------CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh--cc--CHHHHHHHHh
Confidence                             124689999999999998887 3   489999999999988753221  00  0111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..       .      ...+..++|+|.++..++....  ..| .+++.++
T Consensus       213 ~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg  250 (255)
T PRK07523        213 RT-------P------AGRWGKVEELVGACVFLASDASSFVNGHVLYVDGG  250 (255)
T ss_pred             cC-------C------CCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence            10       0      3347789999999999997533  345 6777664

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-20  Score=162.92  Aligned_cols=221  Identities=17%  Similarity=0.128  Sum_probs=153.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||++|++.|++.|++|+++.| +.......  ...+. ....++++++|++|++++.++++      
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r-~~~~~~~~--~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADR-DAEAAERV--AAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecC-CHHHHHHH--HHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999999 75432221  11111 12468899999999998887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++.+++    ++.+ .++||++||..+.++...         
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~---------  149 (252)
T PRK06138         80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGRG---------  149 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCC---------
Confidence             6899999999754321     3445677999999997776665    4455 689999999875553222         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch-hhhhHhhHh
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS-VIGGLCQLT  223 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~-~~~~~~~~~  223 (341)
                                         ...|+.+|...+.+++.++ +   .+++++++||+.++++.....  .... .+.......
T Consensus       150 -------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~  208 (252)
T PRK06138        150 -------------------RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRI--FARHADPEALREAL  208 (252)
T ss_pred             -------------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhh--hccccChHHHHHHH
Confidence                               4679999999999999886 3   389999999999988743221  0000 000000010


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..      ...      ...+++++|+++++..++..+.  ..| .+.+.++
T Consensus       209 ~~------~~~------~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        209 RA------RHP------MNRFGTAEEVAQAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             Hh------cCC------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            00      000      2247899999999999987654  245 4455433

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.3e-20  Score=161.88  Aligned_cols=221  Identities=17%  Similarity=0.162  Sum_probs=156.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|+||++++++|+++|++|++++| +.........  .+......+.++.+|+++.+.+.++++  
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r-~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADI-NAEGAERVAK--QIVADGGTAIAVQVDVSDPDSAKAMADAT   77 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            55456789999999999999999999999999999999 6543222211  111112367789999999988777665  


Q ss_pred             -----CCCEEEEeccCCccc--------cchhHhHhhhhhhhHHHHHHHHHHhcC---CcCEEEEecccccccCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI--------DGYLYKNVVEACVGAAKKIASFCVKSG---TVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                           ++|+|||+|+.....        ..+.++..+++|+.++.++++++...-   +.++||++||..++.       
T Consensus        78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~-------  150 (250)
T PRK07774         78 VSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL-------  150 (250)
T ss_pred             HHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC-------
Confidence                 589999999975321        134456788999999999999887541   146999999987432       


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                              +.+.|+.+|...|.+++.++ +   .++++++++||.+..+.....  .+   ..+
T Consensus       151 ------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~---~~~  201 (250)
T PRK07774        151 ------------------------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV--TP---KEF  201 (250)
T ss_pred             ------------------------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc--CC---HHH
Confidence                                    13579999999999999887 3   389999999999877654332  11   122


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      .+...+..+             ...+.+++|++++++.++....  ..| +||+.++.
T Consensus       202 ~~~~~~~~~-------------~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~  246 (250)
T PRK07774        202 VADMVKGIP-------------LSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQ  246 (250)
T ss_pred             HHHHHhcCC-------------CCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCe
Confidence            222222211             2225678999999999987643  244 78887753

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.88  E-value=1.1e-20  Score=164.70  Aligned_cols=227  Identities=17%  Similarity=0.077  Sum_probs=154.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++||||||+|+||+++++.|++.|++|++++| +........ .+.... ....++++.+|+++++.+.++++      
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADI-NSEKAANVAQEINAEY-GEGMAYGFGADATSEQSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHhc-CCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence            368999999999999999999999999999999 654322221 111110 11368899999999887776654      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..++.|+.++..+++++..    .+...++|++||....++..          
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~----------  149 (259)
T PRK12384         80 GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK----------  149 (259)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC----------
Confidence             5799999998654321     345578889999998877777654    33125899999976444221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|++.+.+++.++    ..|+++.++|||.++++.....     .++.+......
T Consensus       150 ------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~-----~~~~~~~~~~~  206 (259)
T PRK12384        150 ------------------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQS-----LLPQYAKKLGI  206 (259)
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhh-----hhHHHHHhcCC
Confidence                              13679999999988888876    3599999999999887642211     12222111100


Q ss_pred             Cc----cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          225 NE----YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~----~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ..    ..+..      +...+.+++++|++.++..++.+..  ..| +|++.++.
T Consensus       207 ~~~~~~~~~~~------~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        207 KPDEVEQYYID------KVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             ChHHHHHHHHH------hCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCE
Confidence            00    01111      1126678999999999999887543  245 78887754

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.87  E-value=2.1e-21  Score=166.62  Aligned_cols=220  Identities=21%  Similarity=0.259  Sum_probs=156.5

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEecc
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVAT   88 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~a~   88 (341)
                      |+|+||||.+|+++++.|++.+++|++++| +... ...+.++..     +++++.+|+.|++++.++|+++|+||.+.+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R-~~~~-~~~~~l~~~-----g~~vv~~d~~~~~~l~~al~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVR-DPSS-DRAQQLQAL-----GAEVVEADYDDPESLVAALKGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEES-SSHH-HHHHHHHHT-----TTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEe-ccch-hhhhhhhcc-----cceEeecccCCHHHHHHHHcCCceEEeecC
Confidence            799999999999999999999999999999 7632 455555553     678999999999999999999999999877


Q ss_pred             CCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchh
Q 019415           89 PLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYL  168 (341)
Q Consensus        89 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~  168 (341)
                      .....           -.....+++++|++.| +++||+.|... .+....                        ...|.
T Consensus        74 ~~~~~-----------~~~~~~~li~Aa~~ag-Vk~~v~ss~~~-~~~~~~------------------------~~~p~  116 (233)
T PF05368_consen   74 PSHPS-----------ELEQQKNLIDAAKAAG-VKHFVPSSFGA-DYDESS------------------------GSEPE  116 (233)
T ss_dssp             CSCCC-----------HHHHHHHHHHHHHHHT--SEEEESEESS-GTTTTT------------------------TSTTH
T ss_pred             cchhh-----------hhhhhhhHHHhhhccc-cceEEEEEecc-cccccc------------------------ccccc
Confidence            65422           1455789999999999 99999655443 221000                        01234


Q ss_pred             hhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC--c-cccccccchhhccCCCCcc
Q 019415          169 RVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN--E-YVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       169 ~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~i  245 (341)
                      ..+...|...|+.+++.   +++++++|++.++.......      .. . ......  . ....+...      ...++
T Consensus       117 ~~~~~~k~~ie~~l~~~---~i~~t~i~~g~f~e~~~~~~------~~-~-~~~~~~~~~~~~~~~~~~------~~~~~  179 (233)
T PF05368_consen  117 IPHFDQKAEIEEYLRES---GIPYTIIRPGFFMENLLPPF------AP-V-VDIKKSKDVVTLPGPGNQ------KAVPV  179 (233)
T ss_dssp             HHHHHHHHHHHHHHHHC---TSEBEEEEE-EEHHHHHTTT------HH-T-TCSCCTSSEEEEETTSTS------EEEEE
T ss_pred             chhhhhhhhhhhhhhhc---cccceeccccchhhhhhhhh------cc-c-ccccccceEEEEccCCCc------ccccc
Confidence            55667899999988854   79999999998876532211      00 0 011111  1 22222222      45564


Q ss_pred             -cHHHHHHHHHHhhcCCCCC--c-eEEEeccccCHHHHHHHHHHhCCC
Q 019415          246 -HIDDVCEAHIFCMEKPSMS--G-RFFCTNVFVSSAEIASCLQQNYPE  289 (341)
Q Consensus       246 -~v~D~a~~~~~~~~~~~~~--g-~~n~~~~~~s~~e~~~~i~~~~~~  289 (341)
                       ..+|+++++..++.++...  + .+.++++.+|+.|+++.+.+.++.
T Consensus       180 ~~~~Dvg~~va~il~~p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G~  227 (233)
T PF05368_consen  180 TDTRDVGRAVAAILLDPEKHNNGKTIFLAGETLTYNEIAAILSKVLGK  227 (233)
T ss_dssp             EHHHHHHHHHHHHHHSGGGTTEEEEEEEGGGEEEHHHHHHHHHHHHTS
T ss_pred             ccHHHHHHHHHHHHcChHHhcCCEEEEeCCCCCCHHHHHHHHHHHHCC
Confidence             9999999999999987654  3 567777779999999999999853

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.7e-21  Score=167.65  Aligned_cols=232  Identities=16%  Similarity=0.190  Sum_probs=159.4

Q ss_pred             CCCC-CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHK-SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~-~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |+.+ ++++||||||+|.||+++++.|+++|++|++++| +....   +....+......+.++.+|+++++++.++++ 
T Consensus         1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r-~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (258)
T PRK08628          1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGR-SAPDD---EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQ   76 (258)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcC-ChhhH---HHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            5433 4579999999999999999999999999999999 66543   2222222223478999999999998887775 


Q ss_pred             ------CCCEEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHHHh---cCCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFCVK---SGTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                            ++|+|||+||......    .+.++..++.|+.++.++.+++..   .+ ..+||++||....++..       
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~-------  148 (258)
T PRK08628         77 TVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQG-------  148 (258)
T ss_pred             HHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCC-------
Confidence                  5799999999643211    244567899999999999888754   22 46899999987554321       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-CCCCchhhhhHh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-SSTPVSVIGGLC  220 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-~~~~~~~~~~~~  220 (341)
                                           ....|+.+|...|.+++.++ +   .++++..++||.++++..... ...+. ......
T Consensus       149 ---------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~  206 (258)
T PRK08628        149 ---------------------GTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDD-PEAKLA  206 (258)
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccC-HHHHHH
Confidence                                 24689999999999999886 3   489999999999998742211 00000 000011


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccccCHHH
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVFVSSAE  278 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~~s~~e  278 (341)
                      .+...   ...         ...++..+|+|+++.+++...  ...| .+.+.++...+++
T Consensus       207 ~~~~~---~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        207 AITAK---IPL---------GHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             HHHhc---CCc---------cccCCCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence            11110   000         124678999999999998754  2345 5566555554444

>PRK06194 hypothetical protein; Provisional

Probab=99.87  E-value=1.5e-20  Score=166.39  Aligned_cols=222  Identities=11%  Similarity=-0.010  Sum_probs=152.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++++||||||+|+||+++++.|+++|++|++++| +.......  ...+......+.++.+|++|.+.+.++++  
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~   77 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADV-QQDALDRA--VAELRAQGAEVLGVRTDVSDAAQVEALADAA   77 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeC-ChHHHHHH--HHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            55555689999999999999999999999999999999 65432221  11111112368889999999998888776  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHH----HHhcCC-----cCEEEEecccccccCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASF----CVKSGT-----VKRLIYTASVLCASPLKE  139 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~----~~~~~~-----~~~~I~~Ss~~~~~~~~~  139 (341)
                           ++|+|||+||......     .+.++..+++|+.++.+++++    +.+.+.     ..++|++||..++++.. 
T Consensus        78 ~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-  156 (287)
T PRK06194         78 LERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP-  156 (287)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-
Confidence                 4799999999865421     344567799999999997777    344431     15899999987555321 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC-----CceEEEEecCceeCCCCCCCCCCCc
Q 019415          140 DGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS-----GLEVVALALGVVAGDTNLPYSSTPV  213 (341)
Q Consensus       140 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-----~~~~~vlRp~~v~G~~~~~~~~~~~  213 (341)
                                                 ....|+.+|...|.+++.++ +.     ++++..+.|+.+..+-...      
T Consensus       157 ---------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~------  203 (287)
T PRK06194        157 ---------------------------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS------  203 (287)
T ss_pred             ---------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc------
Confidence                                       14679999999999998876 32     4777778876664432111      


Q ss_pred             hhhhhHhhHhcCc-cccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhC
Q 019415          214 SVIGGLCQLTNNE-YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNY  287 (341)
Q Consensus       214 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~  287 (341)
                              ..... ...+.+.+      .+++++++|++.++....              .++..|+++.+.+..
T Consensus       204 --------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~  250 (287)
T PRK06194        204 --------ERNRPADLANTAPP------TRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAI  250 (287)
T ss_pred             --------cccCchhcccCccc------cchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHH
Confidence                    11111 22222222      777888888777653221              167777777777754

>PRK06128 oxidoreductase; Provisional

Probab=99.87  E-value=2.2e-20  Score=166.30  Aligned_cols=223  Identities=13%  Similarity=0.105  Sum_probs=155.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+||||||+|+||+++++.|++.|++|++..| +............+.....++.++.+|+++++.+.++++      
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYL-PEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeC-CcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            3579999999999999999999999999988777 443211111111111223467889999999988777664      


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                       ++|++||+|+.....      ..+.++..+++|+.++.++++++...- .-.++|++||..++.+..            
T Consensus       133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~------------  200 (300)
T PRK06128        133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP------------  200 (300)
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC------------
Confidence             589999999964321      145567899999999999999997541 125999999987544221            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                      ....|+.+|...+.+++.++ +   .|+++.+++||.+.++.....    .........+....
T Consensus       201 ----------------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~----~~~~~~~~~~~~~~  260 (300)
T PRK06128        201 ----------------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG----GQPPEKIPDFGSET  260 (300)
T ss_pred             ----------------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC----CCCHHHHHHHhcCC
Confidence                            13579999999999999887 3   489999999999998853221    00111111111110


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                             .      ...+...+|++.++..++....  ..| +|++.++.
T Consensus       261 -------p------~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~  297 (300)
T PRK06128        261 -------P------MKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGL  297 (300)
T ss_pred             -------C------CCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCE
Confidence                   0      3346789999999999887533  245 77887653

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.87  E-value=2.5e-20  Score=161.23  Aligned_cols=218  Identities=16%  Similarity=0.145  Sum_probs=152.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|+++.| +..... ......+......+.++.+|+++++.+.++++      
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYA-SSEAGA-EALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CchhHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999988888 654211 11111111223478899999999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..++.|+.++.++++++...    + .++||++||....++...         
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~~---------  151 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNPG---------  151 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCCC---------
Confidence             5799999998754321     3345577889999999998888654    3 568999999865553221         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.+|...+.+++.++    ..+++++++||+.+.++.....      ...+......
T Consensus       152 -------------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~------~~~~~~~~~~  206 (248)
T PRK05557        152 -------------------QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL------PEDVKEAILA  206 (248)
T ss_pred             -------------------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc------ChHHHHHHHh
Confidence                               4679999999998888775    2389999999998865432221      1112111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcC--CCCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK--PSMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~g-~~n~~~~  272 (341)
                      ..    .         ...+.+++|++.++..++..  ....| .|++.++
T Consensus       207 ~~----~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~  244 (248)
T PRK05557        207 QI----P---------LGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGG  244 (248)
T ss_pred             cC----C---------CCCCcCHHHHHHHHHHHcCcccCCccccEEEecCC
Confidence            10    0         33467899999999988865  23345 7787654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.87  E-value=1.3e-20  Score=165.68  Aligned_cols=221  Identities=14%  Similarity=0.048  Sum_probs=151.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +++|+||||+|+||++++++|++.|++|++++| +...   ++.+..     .+++++.+|++|++.+.++++       
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r-~~~~---l~~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAAR-RVDK---MEDLAS-----LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHh-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            478999999999999999999999999999999 6532   222221     257899999999998888776       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHH----HHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAA----KKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~----~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|++||+||......     .+.++..+++|+.++    ..++..+++.+ ..++|++||.....+..           
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~-----------  141 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTP-----------  141 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCC-----------
Confidence            6899999999754321     344568899999885    44455666666 68999999976322111           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCC-CC-----CchhhhhH
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYS-ST-----PVSVIGGL  219 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~-~~-----~~~~~~~~  219 (341)
                                       ....|+.+|...+.+.+.++    ..|++++++|||.+.++...... ..     ........
T Consensus       142 -----------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  204 (273)
T PRK06182        142 -----------------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQA  204 (273)
T ss_pred             -----------------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHH
Confidence                             13569999999999877665    34899999999999887432110 00     00000000


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVF  273 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~  273 (341)
                      ..+.+   .+...      .....+.+.+|+|++++.++........|+++.+.
T Consensus       205 ~~~~~---~~~~~------~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~~  249 (273)
T PRK06182        205 QAVAA---SMRST------YGSGRLSDPSVIADAISKAVTARRPKTRYAVGFGA  249 (273)
T ss_pred             HHHHH---HHHHh------hccccCCCHHHHHHHHHHHHhCCCCCceeecCcch
Confidence            00000   00000      01445789999999999999865445577776543

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.2e-20  Score=162.86  Aligned_cols=216  Identities=17%  Similarity=0.096  Sum_probs=150.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +++|+||||+|+||+++++.|+++|++|++++| +....      .    ...+++++++|++|++++.++++       
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r-~~~~~------~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSR-NPARA------A----PIPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-Chhhc------c----ccCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            468999999999999999999999999999999 65331      1    11368899999999998888876       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      .+|+|||+||......     .+..+..+++|+.++.++++++    ++.+ .+++|++||...+.+..           
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----------  140 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAP-----------  140 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCC-----------
Confidence            4799999999754322     3445788999999999988885    5555 78999999976443211           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       ....|+.+|...|.+++.++    +.|+++++++|+.+.++......................
T Consensus       141 -----------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~  203 (270)
T PRK06179        141 -----------------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVV  203 (270)
T ss_pred             -----------------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHH
Confidence                             14679999999999988875    359999999999998875432200000011000000000


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEE
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFC  269 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~  269 (341)
                      .....  ..      .......+|+|+.+..++......-.|..
T Consensus       204 ~~~~~--~~------~~~~~~~~~va~~~~~~~~~~~~~~~~~~  239 (270)
T PRK06179        204 SKAVA--KA------VKKADAPEVVADTVVKAALGPWPKMRYTA  239 (270)
T ss_pred             HHHHH--hc------cccCCCHHHHHHHHHHHHcCCCCCeeEec
Confidence            00000  00      22345689999999999986554445654

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.87  E-value=3e-20  Score=161.06  Aligned_cols=223  Identities=17%  Similarity=0.114  Sum_probs=154.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +.........  .+......+.++.+|+.+++.++++++      
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDL-NREAAEKVAA--DIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC-CHHHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3579999999999999999999999999999999 6543222211  111123468899999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++++++.    +.+ .+++|++||..++++...         
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~---------  148 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSG---------  148 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCC---------
Confidence             5899999998643221     33346779999999999888775    445 689999999875543221         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.+|.+.+.+++.++ +   .+++++++||+.++++..............+...+..
T Consensus       149 -------------------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (250)
T TIGR03206       149 -------------------EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTR  209 (250)
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHh
Confidence                               3679999999999888887 4   3899999999999887422110000000111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .. .            ...+...+|+|+++..++....  ..| ++++.++
T Consensus       210 ~~-~------------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       210 AI-P------------LGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             cC-C------------ccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence            11 0            2235668999999999887543  245 6777654

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.87  E-value=5.5e-20  Score=160.45  Aligned_cols=221  Identities=13%  Similarity=0.039  Sum_probs=149.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +.......+.+.   .....+.++.+|+++++++.++++      
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDR-SELVHEVAAELR---AAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-chHHHHHHHHHH---hcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999 642211112221   222468889999999887776665      


Q ss_pred             -CCCEEEEeccCCc---cc---cchhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQ---HI---DGYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~---~~---~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|++||+|+...   ..   ..+.++..+++|+.++..+++.    +++.+ ..++|++||...+. .          
T Consensus        83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~-~----------  150 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRG-I----------  150 (260)
T ss_pred             CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccC-C----------
Confidence             5899999998532   11   1344567788998887755544    44555 57999999986321 1          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-------CCCCchhh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-------SSTPVSVI  216 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-------~~~~~~~~  216 (341)
                                         ...+|+.+|...+.+++.++ +   .|+++..++||.++++.....       .....+..
T Consensus       151 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  211 (260)
T PRK12823        151 -------------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQ  211 (260)
T ss_pred             -------------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHH
Confidence                               12579999999999999886 4   389999999999999732100       00011122


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      .+........+             ..-+.+++|+++++.+++....  ..| .+++.++.
T Consensus       212 ~~~~~~~~~~~-------------~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        212 QIVDQTLDSSL-------------MKRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHhccCC-------------cccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            22222222111             2235579999999999886542  345 77886654

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.5e-20  Score=161.50  Aligned_cols=219  Identities=12%  Similarity=0.057  Sum_probs=151.5

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ..++|++|||||+|+||+++++.|++.|++|+++.| +...  ..+.+ ..+......++++.+|++|.+.+.++++   
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   82 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYN-RSRD--EAEALAAEIRALGRRAVALQADLADEAEVRALVARAS   82 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CCHH--HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            345689999999999999999999999999988776 4321  11111 1111123468899999999988887765   


Q ss_pred             ----CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcC---CcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSG---TVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                          ++|+|||+|+.....     ..+.++..+++|+.++.++++++....   .-.++|+++|.....+.         
T Consensus        83 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~---------  153 (258)
T PRK09134         83 AALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN---------  153 (258)
T ss_pred             HHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC---------
Confidence                479999999865432     134557889999999999999876642   13588888876422211         


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         .....|+.+|...|.+.+.++ +.  ++++++++||.+.......       ...+.....
T Consensus       154 -------------------p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~-------~~~~~~~~~  207 (258)
T PRK09134        154 -------------------PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQS-------PEDFARQHA  207 (258)
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccC-------hHHHHHHHh
Confidence                               013579999999999999987 33  4899999999886643211       111211111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~  273 (341)
                      ..  .            .....+++|+|++++.+++.+...| .|++.++.
T Consensus       208 ~~--~------------~~~~~~~~d~a~~~~~~~~~~~~~g~~~~i~gg~  244 (258)
T PRK09134        208 AT--P------------LGRGSTPEEIAAAVRYLLDAPSVTGQMIAVDGGQ  244 (258)
T ss_pred             cC--C------------CCCCcCHHHHHHHHHHHhcCCCcCCCEEEECCCe
Confidence            11  0            1224679999999999998776667 66776643

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4e-20  Score=159.12  Aligned_cols=207  Identities=15%  Similarity=0.149  Sum_probs=151.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +..+...  .+..+..  ....++.+|+.|.+++.++++      
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r-~~~~~~~--~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGR-GAAPLSQ--TLPGVPA--DALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeC-ChHhHHH--HHHHHhh--cCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999 7643221  1111111  256788899999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+++......     .+.++..++.|+.++.++++++.    +.+ .+++|++||..++.+..          
T Consensus        81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----------  149 (239)
T PRK12828         81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGP----------  149 (239)
T ss_pred             CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCC----------
Confidence             5899999998654221     33345778899999999988874    345 78999999987544211          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+++.++ +   .++++.++||+.++++.....  .             
T Consensus       150 ------------------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~--~-------------  196 (239)
T PRK12828        150 ------------------GMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD--M-------------  196 (239)
T ss_pred             ------------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc--C-------------
Confidence                              14679999999988888776 2   489999999999998732211  0             


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                           ....       ...+++++|+++++..++.+..  ..| .+++.++
T Consensus       197 -----~~~~-------~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~  235 (239)
T PRK12828        197 -----PDAD-------FSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGG  235 (239)
T ss_pred             -----Cchh-------hhcCCCHHHHHHHHHHHhCcccccccceEEEecCC
Confidence                 0000       3347999999999999997643  345 5666654

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.7e-20  Score=160.90  Aligned_cols=215  Identities=17%  Similarity=0.122  Sum_probs=154.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---CCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---GCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d   81 (341)
                      ++++++||||+|+||+++++.|+++|++|++++| +.++   .+.+...    .+..++.+|+++.+.+.++++   ++|
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r-~~~~---~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~d   79 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAAR-NAAA---LDRLAGE----TGCEPLRLDVGDDAAIRAALAAAGAFD   79 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHH----hCCeEEEecCCCHHHHHHHHHHhCCCC
Confidence            4579999999999999999999999999999999 6533   2222221    135678899999988888776   489


Q ss_pred             EEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                      +|||+|+......     .+.++..+++|+.++.++++++.+.    +..++||++||...+++...             
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------  146 (245)
T PRK07060         80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD-------------  146 (245)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC-------------
Confidence            9999999754321     3445677889999999999988654    11268999999875553221             


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV  228 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (341)
                                     ...|+.+|..+|.+++.++ +   .+++++.+||+.++++.....  ...  ......+...   
T Consensus       147 ---------------~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~--~~~--~~~~~~~~~~---  204 (245)
T PRK07060        147 ---------------HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEA--WSD--PQKSGPMLAA---  204 (245)
T ss_pred             ---------------CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhh--ccC--HHHHHHHHhc---
Confidence                           4679999999999998887 3   389999999999988753321  000  0001111100   


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                         ..       ...+++++|+++++..++..+.  ..| .+++.++
T Consensus       205 ---~~-------~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        205 ---IP-------LGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGG  241 (245)
T ss_pred             ---CC-------CCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCC
Confidence               00       4568999999999999997643  235 5566544

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.87  E-value=5.2e-20  Score=159.57  Aligned_cols=220  Identities=18%  Similarity=0.132  Sum_probs=154.9

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .++++||||||+|.||+++++.|+++|++|++++| +.......  ...+......+.++.+|+++++++.++++     
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDG-LAAEAREL--AAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeC-CHHHHHHH--HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999988 65432211  11111223468999999999998887774     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC---CcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG---TVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                        ++|+|||+|+......     ...++..++.|+.++.++++++...-   ...+||++||.....+...         
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  152 (250)
T PRK12939         82 LGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK---------  152 (250)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC---------
Confidence              5899999999754321     33456778999999999998876432   1359999999775443211         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.+|...|.+++.++ +   .++++..++||.+..+.....  ..   ..+......
T Consensus       153 -------------------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~--~~---~~~~~~~~~  208 (250)
T PRK12939        153 -------------------LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYV--PA---DERHAYYLK  208 (250)
T ss_pred             -------------------cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcccccc--CC---hHHHHHHHh
Confidence                               3579999999999998876 3   489999999998876643221  00   011111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .       ..      ...+++++|+++++..++....  ..| .+.+.++
T Consensus       209 ~-------~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg  246 (250)
T PRK12939        209 G-------RA------LERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGG  246 (250)
T ss_pred             c-------CC------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            1       11      4568899999999999997532  345 5566554

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=5.7e-20  Score=159.39  Aligned_cols=220  Identities=18%  Similarity=0.146  Sum_probs=153.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      .+++||||||+|+||.+++++|+++|++|++++| +.......  ...+.. ...+.++.+|+.+++++.++++      
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDR-NEEAAERV--AAEILA-GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999999 76432221  111111 2468899999999998887765      


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|+|||+|+.....      ..+.++..+++|+.++.++++.+..    .+ .++||++||..++++..         
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---------  149 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRP---------  149 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCC---------
Confidence             579999999874321      1344567899999988777776654    44 68999999987554321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.+|...+.+++.++ +   .+++++.++|+.+.++.....  ...........+.
T Consensus       150 -------------------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~  208 (251)
T PRK07231        150 -------------------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAF--MGEPTPENRAKFL  208 (251)
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhh--hcccChHHHHHHh
Confidence                               24689999999999888876 3   389999999999966532221  0000001111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGR-FFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~-~n~~~~  272 (341)
                      ..       ..      ...+++++|+|.+++.++....  ..|. +.+.++
T Consensus       209 ~~-------~~------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg  247 (251)
T PRK07231        209 AT-------IP------LGRLGTPEDIANAALFLASDEASWITGVTLVVDGG  247 (251)
T ss_pred             cC-------CC------CCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCC
Confidence            10       01      4457899999999999997543  3454 455443

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=5.9e-20  Score=159.29  Aligned_cols=220  Identities=16%  Similarity=0.105  Sum_probs=151.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++|||||+|+||+++++.|++.|++|+++ .| +.....  +....+......+.++.+|+++++++.++++      
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r-~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYAR-SRKAAE--ETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHH--HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999999998764 66 543211  1111111223468899999999998887776      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC---CcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG---TVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++++++....   ..++||++||..+..+..           
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  149 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE-----------  149 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC-----------
Confidence             4899999998654322     33345678899999999988886532   146999999976443211           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       +...|+.+|.+.|.+++.++ +   .|+++++++|+.+..+.....   +.. ..+.......
T Consensus       150 -----------------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~---~~~-~~~~~~~~~~  208 (250)
T PRK08063        150 -----------------NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHF---PNR-EELLEDARAK  208 (250)
T ss_pred             -----------------CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhc---cCc-hHHHHHHhcC
Confidence                             24689999999999999876 3   489999999999977643221   110 1111111111


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      .    .         ...+++.+|+|+++..++..+.  ..| .+++.++.
T Consensus       209 ~----~---------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        209 T----P---------AGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGR  246 (250)
T ss_pred             C----C---------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence            0    0         2347889999999999987643  245 66766543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.2e-20  Score=156.72  Aligned_cols=205  Identities=16%  Similarity=0.104  Sum_probs=145.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---CCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---GCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   82 (341)
                      +|++|||||+|+||+++++.|+++ ++|++++| +...   ...+...   ..+++++.+|+.|++.+.++++   ++|+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r-~~~~---~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~   74 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGR-PAER---LDELAAE---LPGATPFPVDLTDPEAIAAAVEQLGRLDV   74 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeC-CHHH---HHHHHHH---hccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence            468999999999999999999999 99999999 6533   2222211   1267899999999999998887   5899


Q ss_pred             EEEeccCCcccc-----chhHhHhhhhhhhHHH----HHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-----GYLYKNVVEACVGAAK----KIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        83 Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~----~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                      |||+++......     .+.++..++.|+.+..    ++++++++.+  +++|++||..++.+..               
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~~---------------  137 (227)
T PRK08219         75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRANP---------------  137 (227)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcCC---------------
Confidence            999999754321     2334567888888854    4444455444  7899999987544221               


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-CC-ceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccc
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-SG-LEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQ  230 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-~~-~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (341)
                                   +...|+.+|...+.+++.++ + .+ +++..++|+.+.++.....          ...   ....  
T Consensus       138 -------------~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~----------~~~---~~~~--  189 (227)
T PRK08219        138 -------------GWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGL----------VAQ---EGGE--  189 (227)
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhh----------hhh---hccc--
Confidence                         14679999999999888876 3 25 8999999987655421111          000   0000  


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN  271 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~  271 (341)
                        ..      ...+++++|++++++.+++.+....++++.-
T Consensus       190 --~~------~~~~~~~~dva~~~~~~l~~~~~~~~~~~~~  222 (227)
T PRK08219        190 --YD------PERYLRPETVAKAVRFAVDAPPDAHITEVVV  222 (227)
T ss_pred             --cC------CCCCCCHHHHHHHHHHHHcCCCCCccceEEE
Confidence              01      4568999999999999998765444777654

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.5e-19  Score=160.12  Aligned_cols=219  Identities=12%  Similarity=0.085  Sum_probs=155.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+|+||.++++.|++.|++|+++.| +... .....  ..+......+.++.+|+++.+.+.++++     
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r-~~~~~~~~~~--~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYL-DEHEDANETK--QRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CcchHHHHHH--HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999988 6532 11111  1111223468899999999988877764     


Q ss_pred             --CCCEEEEeccCCcccc------chhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID------GYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~------~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ++|+|||+|+......      .+.+...+++|+.++.++++++... ....++|++||..++.+...          
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~----------  191 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET----------  191 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC----------
Confidence              5799999999753211      3345678999999999999998763 11368999999875443211          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                        ...|+.+|...+.+++.++ +   .|++++.++||.++.+.....  .   .......... 
T Consensus       192 ------------------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~--~---~~~~~~~~~~-  247 (290)
T PRK06701        192 ------------------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD--F---DEEKVSQFGS-  247 (290)
T ss_pred             ------------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc--c---CHHHHHHHHh-
Confidence                              3579999999999999887 4   389999999999988743221  0   1111111110 


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                            ...      ...+.+++|+|+++++++....  ..| ++++.++
T Consensus       248 ------~~~------~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg  285 (290)
T PRK06701        248 ------NTP------MQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGG  285 (290)
T ss_pred             ------cCC------cCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence                  001      4558899999999999987643  345 6666654

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.2e-19  Score=157.33  Aligned_cols=214  Identities=14%  Similarity=0.102  Sum_probs=148.2

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |+..++++|+||||+|+||+++++.|+++|++|++++| +...   .+.+..  .....+.++++|+.+.+++..+++  
T Consensus         1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r-~~~~---~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~   74 (249)
T PRK06500          1 MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGR-DPAS---LEAARA--ELGESALVIRADAGDVAAQKALAQAL   74 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC-CHHH---HHHHHH--HhCCceEEEEecCCCHHHHHHHHHHH
Confidence            55555689999999999999999999999999999988 6432   222211  112367889999999876655543  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                           ++|+|||+|+......     .+.++..+++|+.++.++++++... ....++|++||....++...        
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~--------  146 (249)
T PRK06500         75 AEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN--------  146 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC--------
Confidence                 6899999999754321     3455688999999999999999752 11357888888765553221        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                          ...|+.+|...|.+++.++ +   .|+++.++||+.++++........+.....+.+.+.
T Consensus       147 --------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~  206 (249)
T PRK06500        147 --------------------SSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQ  206 (249)
T ss_pred             --------------------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHH
Confidence                                4689999999999998776 3   489999999999998742211000011122222221


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      ...+             ..-+...+|+++++.+++...
T Consensus       207 ~~~~-------------~~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        207 ALVP-------------LGRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             hcCC-------------CCCCcCHHHHHHHHHHHcCcc
Confidence            1110             122457899999999988653

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=2e-19  Score=156.86  Aligned_cols=221  Identities=18%  Similarity=0.113  Sum_probs=153.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||.++++.|++.|++|++++| +....+...  ..+......+.++.+|++|++.+.++++      
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r-~~~~~~~~~--~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSAR-KAEELEEAA--AHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHH--HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3589999999999999999999999999999999 654322111  1111223467889999999988866554      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc-----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS-----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++++++...     + .++||++||...+++....       
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~-------  159 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPE-------  159 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCcc-------
Confidence             5799999998643221     3445678899999999999987654     4 6799999998755532210       


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                       ..+...|+.+|...|.+++.++ +   .|+++.+++|+.+-.+....      ..+.+...+.
T Consensus       160 -----------------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~------~~~~~~~~~~  216 (259)
T PRK08213        160 -----------------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG------TLERLGEDLL  216 (259)
T ss_pred             -----------------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh------hhHHHHHHHH
Confidence                             0124689999999999999886 3   38999999999886553221      1223332222


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ...+             ..-+...+|++.++..++....  ..| .+++.++
T Consensus       217 ~~~~-------------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        217 AHTP-------------LGRLGDDEDLKGAALLLASDASKHITGQILAVDGG  255 (259)
T ss_pred             hcCC-------------CCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            2111             2234568999999888886532  345 4555543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.6e-19  Score=155.58  Aligned_cols=199  Identities=16%  Similarity=0.125  Sum_probs=147.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++++||||+|+||.+++++|+++|++|++++| +..+....  ...+......++++.+|+++++.+.++++      
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLAR-TEENLKAV--AEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999 65432221  11111223478899999999998888775      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++++++..    .+ .+++|++||...+++...         
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~---------  152 (239)
T PRK07666         83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAAV---------  152 (239)
T ss_pred             CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCCC---------
Confidence             6899999998754321     344567899999999999888763    34 578999999875553221         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.+|.+.+.+++.++    +.|++++++||+.+.++.....            ....
T Consensus       153 -------------------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~------------~~~~  201 (239)
T PRK07666        153 -------------------TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL------------GLTD  201 (239)
T ss_pred             -------------------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc------------cccc
Confidence                               3579999999998888775    2489999999999977632211            0000


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      .     .         ...++..+|+|+.+..++..+
T Consensus       202 ~-----~---------~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        202 G-----N---------PDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             c-----C---------CCCCCCHHHHHHHHHHHHhCC
Confidence            0     0         234677999999999999864

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.5e-20  Score=161.45  Aligned_cols=222  Identities=18%  Similarity=0.140  Sum_probs=153.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +.......  ...+......++++.+|+++++.+.++++      
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAAR-TAERLDEV--AAEIDDLGRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC-CHHHHHHH--HHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4589999999999999999999999999999999 75432221  11121122468899999999988877664      


Q ss_pred             -CCCEEEEeccCCcc------ccchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQH------IDGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       ++|+|||+|+....      ...+.++..+++|+.++..+++++...-  +..+||++||.....+..           
T Consensus        81 g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------  149 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP-----------  149 (258)
T ss_pred             CCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC-----------
Confidence             57999999987432      1145567889999999999999987531  125899999987543221           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCc-------hhhhh
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPV-------SVIGG  218 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~-------~~~~~  218 (341)
                                       +...|+.+|...+.+++.++ +   .++++..+||+.++++.....  ...       -...+
T Consensus       150 -----------------~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~--~~~~~~~~~~~~~~~  210 (258)
T PRK07890        150 -----------------KYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGY--FRHQAGKYGVTVEQI  210 (258)
T ss_pred             -----------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHH--hhhcccccCCCHHHH
Confidence                             24689999999999999887 3   389999999999999853211  000       00111


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .......       ..      ...+.+++|++++++.++...  ...| ++.+.++
T Consensus       211 ~~~~~~~-------~~------~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        211 YAETAAN-------SD------LKRLPTDDEVASAVLFLASDLARAITGQTLDVNCG  254 (258)
T ss_pred             HHHHhhc-------CC------ccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence            1111000       00      334778999999999988742  2344 4444443

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.5e-19  Score=156.56  Aligned_cols=219  Identities=14%  Similarity=0.086  Sum_probs=149.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      +.+|||||+|+||++++++|+++|+.|++..| +... ...+....+......+.++.+|+++.+.+.++++       +
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYL-RNRD-AAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecC-CCHH-HHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999887665 3221 1111111121222467889999999988887775       5


Q ss_pred             CCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC------CcCEEEEecccccccCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG------TVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                      +|+|||+|+.....      ..+.++..+++|+.++.++++++...-      .-.++|++||..+.++...        
T Consensus        81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------  152 (248)
T PRK06123         81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG--------  152 (248)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--------
Confidence            79999999975431      133456889999999999988876531      0136999999876653221        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.+|...|.+++.++ +   .|++++++||+.++++.....     ..+.......
T Consensus       153 -------------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~-----~~~~~~~~~~  208 (248)
T PRK06123        153 -------------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG-----GEPGRVDRVK  208 (248)
T ss_pred             -------------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc-----CCHHHHHHHH
Confidence                               01359999999999998886 3   389999999999999853321     0111221111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ...+             ..-+.+++|+++++..++....  ..| .|++.++
T Consensus       209 ~~~p-------------~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        209 AGIP-------------MGRGGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             hcCC-------------CCCCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            1110             1123468999999999887542  344 7777654

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=159.30  Aligned_cols=161  Identities=22%  Similarity=0.305  Sum_probs=125.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +...   .+.+..     .+++++.+|++|+++++++++      
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r-~~~~---~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~~~~~   73 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCR-KEED---VAALEA-----EGLEAFQLDYAEPESIAALVAQVLELS   73 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHH-----CCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            3478999999999999999999999999999999 7543   223322     257889999999987776654      


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhH----HHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGA----AKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+||......     .+..+..+++|+.+    +.++++.+++.+ ..++|++||.....+.          
T Consensus        74 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~----------  142 (277)
T PRK05993         74 GGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPM----------  142 (277)
T ss_pred             CCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCC----------
Confidence              4799999998755432     23446789999999    566777777777 7899999997643321          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCC
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGD  203 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~  203 (341)
                                        .+...|+.||...|.+.+.++    +.|+++++++||.+-.+
T Consensus       143 ------------------~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~  184 (277)
T PRK05993        143 ------------------KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR  184 (277)
T ss_pred             ------------------CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence                              124689999999999988875    34899999999998665

>PRK07985 oxidoreductase; Provisional

Probab=99.85  E-value=2.2e-19  Score=159.27  Aligned_cols=221  Identities=14%  Similarity=0.098  Sum_probs=151.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++..| +... ...+.+.. .......+.++.+|+++++++.++++     
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYL-PVEE-EDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecC-Ccch-hhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999998776 4322 11222211 11223467889999999987776654     


Q ss_pred             --CCCEEEEeccCCcc----c--cchhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH----I--DGYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~----~--~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ++|++||+|+....    .  ..+.++..+++|+.++..+++++... ..-.+||++||..++.+...          
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~----------  195 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH----------  195 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC----------
Confidence              57999999986421    1  14556788999999999999998753 11368999999875432211          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                        ...|+.+|...+.+++.++ +   .|+++.+++||.|.++.....    .............
T Consensus       196 ------------------~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~----~~~~~~~~~~~~~  253 (294)
T PRK07985        196 ------------------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG----GQTQDKIPQFGQQ  253 (294)
T ss_pred             ------------------cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccccc----CCCHHHHHHHhcc
Confidence                              3579999999999988887 4   489999999999998853211    0001111111111


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                       ..            ...+...+|+|.++..++....  ..| ++.+.++
T Consensus       254 -~~------------~~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG  290 (294)
T PRK07985        254 -TP------------MKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_pred             -CC------------CCCCCCHHHHHHHHHhhhChhcCCccccEEeeCCC
Confidence             00            2235679999999999987533  345 5555544

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.5e-19  Score=154.49  Aligned_cols=205  Identities=14%  Similarity=0.135  Sum_probs=148.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|.||+++++.|+++|++|++++| +........  ........++.++.+|+++++.+.++++  
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVAR-SQDALEALA--AELRSTGVKAAAYSIDLSNPEAIAPGIAEL   77 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHHhCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            66667789999999999999999999999999999999 654322211  1111223478899999999988777765  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|+|||+|+......     .+.++..+++|+.++.++++++    .+.+ ..++|++||...+.+..      
T Consensus        78 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------  150 (241)
T PRK07454         78 LEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFP------  150 (241)
T ss_pred             HHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCC------
Confidence                 4899999999754321     3345677899999988877765    3444 57999999987433211      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.+|...+.+.+.++    ..|++++++||+.+-.+.....    .    .  
T Consensus       151 ----------------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~----~----~--  198 (241)
T PRK07454        151 ----------------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE----T----V--  198 (241)
T ss_pred             ----------------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc----c----c--
Confidence                                  14679999999999888775    2489999999999876532111    0    0  


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                         .  ....          ...++..+|+|+++..++..+.
T Consensus       199 ---~--~~~~----------~~~~~~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        199 ---Q--ADFD----------RSAMLSPEQVAQTILHLAQLPP  225 (241)
T ss_pred             ---c--cccc----------cccCCCHHHHHHHHHHHHcCCc
Confidence               0  0000          1235789999999999998653

>PRK05717 oxidoreductase; Validated

Probab=99.85  E-value=3.5e-19  Score=154.93  Aligned_cols=216  Identities=15%  Similarity=0.113  Sum_probs=149.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +..+....  ....   ...+.++.+|+++++.+.++++      
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~-~~~~~~~~--~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADL-DRERGSKV--AKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcC-CHHHHHHH--HHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999888 65332211  1111   2368899999999887765543      


Q ss_pred             -CCCEEEEeccCCccc-------cchhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-------DGYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+.....       ..+.++..+++|+.++.++++++...  .+..++|++||....++...         
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~---------  153 (255)
T PRK05717         83 GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD---------  153 (255)
T ss_pred             CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC---------
Confidence             479999999976432       13345688999999999999999642  11368999999875543211         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                         ...|+.+|...+.+++.++ +.  ++++..++|+.+.++.....  .   ...+.......
T Consensus       154 -------------------~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~--~---~~~~~~~~~~~  209 (255)
T PRK05717        154 -------------------TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR--R---AEPLSEADHAQ  209 (255)
T ss_pred             -------------------CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc--c---chHHHHHHhhc
Confidence                               3679999999999999887 43  69999999999988743221  0   00010000000


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .    .         ...+.+++|++.++..++....  ..| .+.+.++
T Consensus       210 ~----~---------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        210 H----P---------AGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGG  246 (255)
T ss_pred             C----C---------CCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence            0    0         2346789999999998886532  245 4555433

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.4e-19  Score=157.56  Aligned_cols=194  Identities=21%  Similarity=0.193  Sum_probs=143.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +|+||||||+|+||+++++.|++.|++|++++| +......  ....++.. .++.++.+|++|++++.++++       
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r-~~~~~~~--~~~~~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   77 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVAR-RTDALQA--FAARLPKA-ARVSVYAADVRDADALAAAAADFIAAHG   77 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHH--HHHhcccC-CeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999 7533221  11222222 278899999999988877765       


Q ss_pred             CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHH----HHHhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIAS----FCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      .+|++||+||.....      ..+.++..+++|+.++.++++    ++++.+ ..++|++||...+++...         
T Consensus        78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~~---------  147 (257)
T PRK07024         78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLPG---------  147 (257)
T ss_pred             CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCC---------
Confidence            379999999975421      124467889999999999776    455555 689999999876553221         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.+|...+.+++.++    ..|++++++||+.+.++.....               .
T Consensus       148 -------------------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---------------~  193 (257)
T PRK07024        148 -------------------AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN---------------P  193 (257)
T ss_pred             -------------------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC---------------C
Confidence                               3579999999999998875    3489999999999987632111               0


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                          +.          .-.++..+|+++.+..++.+.
T Consensus       194 ----~~----------~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        194 ----YP----------MPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             ----CC----------CCCccCHHHHHHHHHHHHhCC
Confidence                00          111356899999999999754

>PRK08264 short chain dehydrogenase; Validated

Probab=99.85  E-value=2.4e-19  Score=154.32  Aligned_cols=165  Identities=19%  Similarity=0.209  Sum_probs=129.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |....+++||||||+|+||+++++.|+++|+ +|++++| +..+...         ...+++++.+|+.+++.+.++++ 
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r-~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~   70 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAAR-DPESVTD---------LGPRVVPLQLDVTDPASVAAAAEA   70 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEec-Chhhhhh---------cCCceEEEEecCCCHHHHHHHHHh
Confidence            4444568999999999999999999999998 9999999 6543111         23478899999999999888876 


Q ss_pred             --CCCEEEEeccCCc-cc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQ-HI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~-~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        .+|+|||+|+... ..     ..+.+...+++|+.++.++++++..    .+ ..+||++||...+.+..        
T Consensus        71 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~--------  141 (238)
T PRK08264         71 ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFP--------  141 (238)
T ss_pred             cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCC--------
Confidence              4799999999722 11     1344567899999999999998653    44 67899999987544211        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCC
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDT  204 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~  204 (341)
                                          ....|+.+|..+|.+.+.++ +   .+++++++||+.+.++.
T Consensus       142 --------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        142 --------------------NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             --------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence                                24689999999999988876 3   38999999999987653

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.9e-19  Score=154.64  Aligned_cols=215  Identities=15%  Similarity=0.090  Sum_probs=152.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||.++++.|+++|++|++++| +.....   ......  ...+.++.+|+++++.+.++++      
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r-~~~~~~---~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDR-SEDVAE---VAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHH---HHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3579999999999999999999999999999999 654311   112221  1356789999999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++++++...    + ..+||++||....++...         
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~---------  157 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALER---------  157 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCCCC---------
Confidence             5799999999764322     3345678999999999999987643    4 579999999875543222         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.+|...+.+.+.++ +   .|+++..++||.+..+.....     +..........
T Consensus       158 -------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~-----~~~~~~~~~~~  213 (255)
T PRK06841        158 -------------------HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKA-----WAGEKGERAKK  213 (255)
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccc-----cchhHHHHHHh
Confidence                               3579999999999988887 3   489999999999977643211     00000011110


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .       ..      ...+.+.+|++++++.++....  ..| ++.+.++
T Consensus       214 ~-------~~------~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg  251 (255)
T PRK06841        214 L-------IP------AGRFAYPEEIAAAALFLASDAAAMITGENLVIDGG  251 (255)
T ss_pred             c-------CC------CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            0       00      3457889999999999997543  356 4455443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.85  E-value=2.3e-19  Score=155.81  Aligned_cols=206  Identities=14%  Similarity=0.086  Sum_probs=147.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +.        +.   .....+.++++|+++++.+.++++      
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~-~~--------~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQ-AF--------LT---QEDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEec-ch--------hh---hcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999 54        11   123468899999999988888775      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..+++|+.++..+++++..    .+ ..++|++||.....+..          
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~~----------  143 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRI----------  143 (252)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCC----------
Confidence             3799999999754321     345568899999999999988753    33 46899999976433211          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+++.++ +   .++++.+++|+.++++........+..........  
T Consensus       144 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~--  203 (252)
T PRK08220        144 ------------------GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGF--  203 (252)
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhH--
Confidence                              24689999999999998887 4   58999999999998885322100000000000000  


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                       ...+.....      ...+++++|+|++++.++..
T Consensus       204 -~~~~~~~~~------~~~~~~~~dva~~~~~l~~~  232 (252)
T PRK08220        204 -PEQFKLGIP------LGKIARPQEIANAVLFLASD  232 (252)
T ss_pred             -HHHHhhcCC------CcccCCHHHHHHHHHHHhcc
Confidence             000000011      45689999999999998864

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.9e-19  Score=156.16  Aligned_cols=205  Identities=15%  Similarity=0.146  Sum_probs=147.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      ++||||||+|+||+++++.|++.|++|++++| +.......  ...+......+.++.+|+.|++.+..+++       +
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAAR-NETRLASL--AQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999 75432221  11222223478899999999988887765       5


Q ss_pred             CCEEEEeccCCcccc------chhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID------GYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~------~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      +|+|||+|+......      .+.+...+++|+.++.++++.+...  ....++|++||..++.+..             
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------  145 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP-------------  145 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC-------------
Confidence            899999998755432      2224567999999999999998532  1147899999987544321             


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                                     +...|+.+|...|.+.+.+.    ..++++++++|+.+..+.....      ..      .....
T Consensus       146 ---------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~------~~------~~~~~  198 (263)
T PRK06181        146 ---------------TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA------LD------GDGKP  198 (263)
T ss_pred             ---------------CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh------cc------ccccc
Confidence                           24689999999999988775    2489999999999876632211      00      00001


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                      .......      ..++++++|+|+++..++..
T Consensus       199 ~~~~~~~------~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        199 LGKSPMQ------ESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             ccccccc------ccCCCCHHHHHHHHHHHhhC
Confidence            1111111      34789999999999999974

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.85  E-value=2.3e-19  Score=155.44  Aligned_cols=203  Identities=17%  Similarity=0.157  Sum_probs=143.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      |+|+||||+|+||.++++.|++.|++|++++| +..+   .+.+...  ...++.++.+|+.+.+.+.++++       +
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r-~~~~---~~~~~~~--~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   74 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGR-RQER---LQELKDE--LGDNLYIAQLDVRNRAAIEEMLASLPAEWRN   74 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHH--hccceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999 7543   2222221  12368899999999988877664       6


Q ss_pred             CCEEEEeccCCcc------ccchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQH------IDGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        80 ~d~Vi~~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      +|+|||+||....      ...+.++..+++|+.++..+++++    .+.+ .+++|++||.....+.            
T Consensus        75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~------------  141 (248)
T PRK10538         75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPY------------  141 (248)
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCC------------
Confidence            8999999986421      114455788999999966665554    4455 6899999997643321            


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                      .....|+.+|...+.+.+.++ +   .++++.+++||.+.|+.....    .+.... ... . 
T Consensus       142 ----------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~----~~~~~~-~~~-~-  198 (248)
T PRK10538        142 ----------------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV----RFKGDD-GKA-E-  198 (248)
T ss_pred             ----------------CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchh----hccCcH-HHH-H-
Confidence                            124689999999999998886 3   489999999999987643211    000000 000 0 


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                       ..+ .         ...++..+|+|+++..++..+.
T Consensus       199 -~~~-~---------~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        199 -KTY-Q---------NTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             -hhc-c---------ccCCCCHHHHHHHHHHHhcCCC
Confidence             000 0         2245789999999999987543

>PLN02253 xanthoxin dehydrogenase

Probab=99.85  E-value=5e-19  Score=156.14  Aligned_cols=225  Identities=17%  Similarity=0.129  Sum_probs=153.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||+|.||+++++.|++.|++|++++| +......  ....+. ...+++++++|++|++.+.++++      
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~-~~~~~~~--~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDL-QDDLGQN--VCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHH--HHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999988 6433221  112221 12468899999999988887776      


Q ss_pred             -CCCEEEEeccCCccc-------cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-------DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ++|++||+||.....       ..+.++..+++|+.++.++++++...    + ..++|++||....++...       
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~-------  164 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGGLG-------  164 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccCCC-------
Confidence             689999999975321       13456788999999999998887642    2 368999999775443211       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCc--hhhhhHh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPV--SVIGGLC  220 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~--~~~~~~~  220 (341)
                                           ...|+.+|...|.+.+.++ +   .|+++..++|+.+..+.....  .+.  .......
T Consensus       165 ---------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~~  221 (280)
T PLN02253        165 ---------------------PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAH--LPEDERTEDALA  221 (280)
T ss_pred             ---------------------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccc--cccccchhhhhh
Confidence                                 3579999999999999887 4   389999999999977642211  010  0001110


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .+..   ........     ....++++|+++++.+++....  ..| .+++.++
T Consensus       222 ~~~~---~~~~~~~l-----~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
T PLN02253        222 GFRA---FAGKNANL-----KGVELTVDDVANAVLFLASDEARYISGLNLMIDGG  268 (280)
T ss_pred             hhHH---HhhcCCCC-----cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCc
Confidence            0000   00000000     1235789999999999986533  245 6677654

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.1e-19  Score=155.82  Aligned_cols=206  Identities=13%  Similarity=0.010  Sum_probs=145.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      |+||||||+|.||+++++.|++.|++|++++| +.......  ...+......+.++.+|+++++++.++++       +
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   77 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADV-NEEGGEET--LKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGG   77 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999 65432211  11122223478899999999988877765       5


Q ss_pred             CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +|+|||+||......     .+.++..+++|+.++.++.++    +++.+ ..++|++||..++.+..            
T Consensus        78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~------------  144 (270)
T PRK05650         78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGP------------  144 (270)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCC------------
Confidence            899999999765422     234566789998888886666    45555 68999999987544221            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                      ....|+.+|...+.+.+.++ +   .|+++++++|+.+..+.....   ....+......... 
T Consensus       145 ----------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~-  204 (270)
T PRK05650        145 ----------------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSF---RGPNPAMKAQVGKL-  204 (270)
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCccccc---ccCchhHHHHHHHH-
Confidence                            14689999999887777776 3   489999999999987743321   00011111111000 


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                             .      ...+++++|+|+.++.++++.
T Consensus       205 -------~------~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        205 -------L------EKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             -------h------hcCCCCHHHHHHHHHHHHhCC
Confidence                   0      234678999999999999863

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.7e-19  Score=152.58  Aligned_cols=219  Identities=18%  Similarity=0.161  Sum_probs=151.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|+++.| +... ........+......+.++.+|+++++.+.++++      
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYA-GSAA-AADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC-CCHH-HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4589999999999999999999999999988777 4432 1111112222223478999999999988888776      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++++++.+.- ...++|++||.....+.              
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~--------------  147 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL--------------  147 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC--------------
Confidence             5899999999754311     34456789999999999998886542 13589999997643321              


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                                    .....|+.+|...+.+++.++ +   .++++++++|+.+-.+.....     ........+.+..+
T Consensus       148 --------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~-----~~~~~~~~~~~~~~  208 (245)
T PRK12937        148 --------------PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG-----KSAEQIDQLAGLAP  208 (245)
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc-----CCHHHHHHHHhcCC
Confidence                          124689999999999998876 3   389999999998866532111     01112222211110


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                                   ...+.+++|+++++..++....  ..| .+++.+
T Consensus       209 -------------~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        209 -------------LERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             -------------CCCCCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence                         2335678999999999886543  345 556654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.84  E-value=2.7e-19  Score=154.98  Aligned_cols=215  Identities=16%  Similarity=0.155  Sum_probs=151.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|.||.+++++|++.|++|++++| +... ...+.+...   ...+.++.+|+++++++.++++      
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r-~~~~-~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGR-SEPS-ETQQQVEAL---GRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-chHH-HHHHHHHhc---CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999998 6421 222222222   2468899999999988876654      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+|+......     .+.+++.+++|+.++.++++++...    +...++|++||..++.+..          
T Consensus        79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  148 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI----------  148 (248)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC----------
Confidence             5899999999754322     3445678999999999999987542    2136899999987543221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|.+.+.+++.++ +   +|+++++++||.+..+.....  .+.  .........
T Consensus       149 ------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~--~~~--~~~~~~~~~  206 (248)
T TIGR01832       149 ------------------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQAL--RAD--EDRNAAILE  206 (248)
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcc--ccC--hHHHHHHHh
Confidence                              13579999999999999887 3   389999999999977643211  000  000001111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceEEE
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRFFC  269 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~n~  269 (341)
                      .   .   .       ...++..+|+|+++..++....  ..|.+..
T Consensus       207 ~---~---~-------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~  240 (248)
T TIGR01832       207 R---I---P-------AGRWGTPDDIGGPAVFLASSASDYVNGYTLA  240 (248)
T ss_pred             c---C---C-------CCCCcCHHHHHHHHHHHcCccccCcCCcEEE
Confidence            0   0   0       3458889999999999997533  3464443

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08324 short chain dehydrogenase; Validated

Probab=99.84  E-value=3.3e-19  Score=174.96  Aligned_cols=229  Identities=17%  Similarity=0.101  Sum_probs=157.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +........  ..+... ..+.++.+|+++++.+.++++      
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r-~~~~~~~~~--~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADL-DEEAAEAAA--AELGGP-DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeC-CHHHHHHHH--HHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3579999999999999999999999999999999 764322221  111111 478899999999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCc-CEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTV-KRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~-~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|+|||+||......     .+.++..+++|+.++.++++++.    +.+ . .+||++||..++.+..         
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vsS~~~~~~~~---------  566 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIASKNAVNPGP---------  566 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEECCccccCCCC---------
Confidence             6899999999654322     34456789999999999977764    334 3 6899999987555322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCcee-CCCCCCCCCCCchhhhhHhhH
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVA-GDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~-G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         ....|+.+|...+.+++.++ +   .|+++.+++|+.+| +......    .+...  +..
T Consensus       567 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~----~~~~~--~~~  621 (681)
T PRK08324        567 -------------------NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG----EWIEA--RAA  621 (681)
T ss_pred             -------------------CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc----hhhhh--hhh
Confidence                               14789999999999999886 3   37999999999998 5432111    11100  000


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhc--CCCCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCME--KPSMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~--~~~~~g-~~n~~~~  272 (341)
                      ..+...-........+...+.+++++|+|+++..++.  .....| +|++.++
T Consensus       622 ~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG  674 (681)
T PRK08324        622 AYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGG  674 (681)
T ss_pred             hccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            0000000000001112226789999999999999884  334445 7888765

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.84  E-value=3.6e-19  Score=153.98  Aligned_cols=217  Identities=15%  Similarity=0.103  Sum_probs=145.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEe-cCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTL-RPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++||||||+|+||++++++|+++|++|+++. | +.....  +....+......+.++.+|++|++++.++++       
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   78 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQ-NLHAAQ--EVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE   78 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-ChHHHH--HHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999998754 4 433211  1111121223468889999999998887766       


Q ss_pred             CCCEEEEeccCCcccc------chhHhHhhhhhhhHHHHHHHHHHhcC------CcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID------GYLYKNVVEACVGAAKKIASFCVKSG------TVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~------~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                      ++|+|||+|+......      .+.++..+++|+.++..+++++...-      +..+||++||..++++...       
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~-------  151 (247)
T PRK09730         79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG-------  151 (247)
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC-------
Confidence            3689999999653211      33456789999999988877765431      1256999999875553211       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.+|...|.+++.++ +   .+++++++||+.++++.....    . .+......
T Consensus       152 --------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~----~-~~~~~~~~  206 (247)
T PRK09730        152 --------------------EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG----G-EPGRVDRV  206 (247)
T ss_pred             --------------------cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC----C-CHHHHHHH
Confidence                                12469999999999888776 3   489999999999999854322    0 11111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ....+             .....+.+|+++++..++....  ..| .+.+.+
T Consensus       207 ~~~~~-------------~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g  245 (247)
T PRK09730        207 KSNIP-------------MQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAG  245 (247)
T ss_pred             HhcCC-------------CCCCcCHHHHHHHHHhhcChhhcCccCcEEecCC
Confidence            11110             1113468999999999887532  344 455544

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.84  E-value=5.2e-19  Score=152.79  Aligned_cols=218  Identities=18%  Similarity=0.140  Sum_probs=151.2

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|+||+++++.|+++|+.|++..| +...   .+.+...  ...+++++.+|+++.+.++++++  
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~-~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   74 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGT-RVEK---LEALAAE--LGERVKIFPANLSDRDEVKALGQKA   74 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC-CHHH---HHHHHHH--hCCceEEEEccCCCHHHHHHHHHHH
Confidence            55446789999999999999999999999999988877 5432   2222111  12368899999999988877653  


Q ss_pred             -----CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|+|||+|+.....     ..+.++..+++|+.++.++++++..    .+ .++||++||....++...     
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~-----  148 (245)
T PRK12936         75 EADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPG-----  148 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCCC-----
Confidence                 589999999975432     1344568899999999998887643    34 579999999875553222     


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                             ...|+.+|...+.+++.++ +   .++++++++|+.+..+.....      ......
T Consensus       149 -----------------------~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~------~~~~~~  199 (245)
T PRK12936        149 -----------------------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL------NDKQKE  199 (245)
T ss_pred             -----------------------CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc------ChHHHH
Confidence                                   3579999998887777765 2   489999999998855432111      111111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .....      ..       ...+...+|+++++.+++....  ..| .+++.++
T Consensus       200 ~~~~~------~~-------~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        200 AIMGA------IP-------MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             HHhcC------CC-------CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            11110      00       3336679999999988886533  245 6777665

>PRK09186 flagellin modification protein A; Provisional

Probab=99.84  E-value=2.9e-19  Score=155.49  Aligned_cols=224  Identities=18%  Similarity=0.190  Sum_probs=148.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhcC----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQG----   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----   79 (341)
                      ++|+||||||+|+||+++++.|++.|++|+++.| +.+..... ..+.... ....+.++.+|++|++.+.++++.    
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADI-DKEALNELLESLGKEF-KSKKLSLVELDITDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec-ChHHHHHHHHHHHhhc-CCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999 65442222 1111110 123566789999999988887763    


Q ss_pred             ---CCEEEEeccCCccc--------cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           80 ---CDFVFHVATPLQHI--------DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        80 ---~d~Vi~~a~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                         +|+|||+|+.....        ..+.+...+++|+.++..+++++    ++.+ .+++|++||....++..      
T Consensus        81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~------  153 (256)
T PRK09186         81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPK------  153 (256)
T ss_pred             cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhcccc------
Confidence               79999999753211        13345677888988777665554    4455 67999999976544211      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                        ....+...          ......|+.+|...+.+.+.++ +   .++++++++|+.++++..          ..+..
T Consensus       154 --~~~~~~~~----------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~----------~~~~~  211 (256)
T PRK09186        154 --FEIYEGTS----------MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP----------EAFLN  211 (256)
T ss_pred             --chhccccc----------cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC----------HHHHH
Confidence              11112110          0112479999999999987766 2   489999999998875421          11111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ......    .         ...+++++|+|+++..++....  ..| .+.+.++
T Consensus       212 ~~~~~~----~---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        212 AYKKCC----N---------GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             HHHhcC----C---------ccCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence            111110    0         3347899999999999997543  345 4455443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.84  E-value=3.3e-19  Score=153.39  Aligned_cols=214  Identities=15%  Similarity=0.120  Sum_probs=149.8

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------CCC
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------GCD   81 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   81 (341)
                      |||||++|+||+++++.|+++|++|++++| +... ........+......+.++.+|++++++++++++       .+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r-~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYR-SSEE-GAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeC-Cchh-HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999988 6422 1111111122222368899999999988877765       469


Q ss_pred             EEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        82 ~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                      +|||+|+.....     ..+.++..++.|+.++.++++++...    + .++||++||...+++...             
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~~~-------------  144 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGNAG-------------  144 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCC-------------
Confidence            999999975432     13445688999999999999988753    3 579999999865654322             


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV  228 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (341)
                                     ...|+.+|...+.+++.++ +   .|++++++||+.+.++.....      ...+...+..... 
T Consensus       145 ---------------~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~------~~~~~~~~~~~~~-  202 (239)
T TIGR01830       145 ---------------QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKL------SEKVKKKILSQIP-  202 (239)
T ss_pred             ---------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc------ChHHHHHHHhcCC-
Confidence                           3679999999998888876 3   489999999998866532211      1111112211110 


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                                  ..-+.+++|+++++..++...  ...| +||+.++
T Consensus       203 ------------~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       203 ------------LGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             ------------cCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence                        223667999999999888543  2344 7888654

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.84  E-value=5.9e-19  Score=145.60  Aligned_cols=211  Identities=17%  Similarity=0.161  Sum_probs=156.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |+..++|.++|||||+-||.++++.|++.|++|++..| +.+   +++.+...-.. ..+..+..|++|.+++.++++  
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aR-R~d---rL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~   75 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAAR-REE---RLEALADEIGA-GAALALALDVTDRAAVEAAIEAL   75 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec-cHH---HHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHH
Confidence            66666788999999999999999999999999999999 663   34444332111 478999999999987655544  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||.||......     .++++.++++|+.|..++..+.    .+++ ...+|++||.+..+++..     
T Consensus        76 ~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~-----  149 (246)
T COG4221          76 PEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPG-----  149 (246)
T ss_pred             HHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCC-----
Confidence                 6999999999765532     6778899999999999887775    4554 569999999987665443     


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                             .+.|+.+|+..-.+...+. +   .+++++.+-||.+-.......   +. -     
T Consensus       150 -----------------------~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v---~~-~-----  197 (246)
T COG4221         150 -----------------------GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTV---RF-E-----  197 (246)
T ss_pred             -----------------------CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccc---cC-C-----
Confidence                                   4789999999888877776 3   489999999999955432221   00 0     


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM  263 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  263 (341)
                         +..........      ....+..+|+|+++.++++.|..
T Consensus       198 ---g~~~~~~~~y~------~~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         198 ---GDDERADKVYK------GGTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             ---chhhhHHHHhc------cCCCCCHHHHHHHHHHHHhCCCc
Confidence               00000111001      45688899999999999998753

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.9e-19  Score=153.78  Aligned_cols=218  Identities=14%  Similarity=0.083  Sum_probs=150.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||.++++.|+++|++|++++| +.......  ...+.....+++++.+|+++++.+.++++      
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAAR-TESQLDEV--AEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3579999999999999999999999999999999 75432211  11111223468899999999988877665      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh-----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK-----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++++++..     .+ ..++|++||.....+..         
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~---------  155 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTMGRLAGR---------  155 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEccccccCCCC---------
Confidence             6899999998643321     344668899999999999999864     33 57899999976433211         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         +...|+.+|..++.+++.++ +.  ++++..++|+.+..+.....  .+  ...+...+..
T Consensus       156 -------------------~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~--~~--~~~~~~~~~~  212 (263)
T PRK07814        156 -------------------GFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVV--AA--NDELRAPMEK  212 (263)
T ss_pred             -------------------CCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhc--cC--CHHHHHHHHh
Confidence                               24689999999999999887 42  68999999998865532111  00  0111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ..      .       ...+...+|++++++.++....  ..| .+.+.+
T Consensus       213 ~~------~-------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  249 (263)
T PRK07814        213 AT------P-------LRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDG  249 (263)
T ss_pred             cC------C-------CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECC
Confidence            10      0       2335678999999999986532  234 445543

>PRK06398 aldose dehydrogenase; Validated

Probab=99.84  E-value=5.3e-19  Score=154.01  Aligned_cols=160  Identities=15%  Similarity=0.126  Sum_probs=127.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |+..+++++|||||+|.||+++++.|++.|++|++++| +...             ...+.++++|+++++++.++++  
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r-~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~   66 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDI-KEPS-------------YNDVDYFKVDVSNKEQVIKGIDYV   66 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-Cccc-------------cCceEEEEccCCCHHHHHHHHHHH
Confidence            56556789999999999999999999999999999999 6532             1257899999999988877765  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||+||......     .+.++..+++|+.++..+++++..    .+ ..++|++||.....+..      
T Consensus        67 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  139 (258)
T PRK06398         67 ISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTR------  139 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCCC------
Confidence                 5899999999743221     445668899999999999887753    33 57999999987443211      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCC
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGD  203 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~  203 (341)
                                            ....|+.+|...+.+.+.++ +.  .+++..++||.+-.+
T Consensus       140 ----------------------~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~  179 (258)
T PRK06398        140 ----------------------NAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP  179 (258)
T ss_pred             ----------------------CCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence                                  24689999999999999887 43  499999999988655

>PRK08017 oxidoreductase; Provisional

Probab=99.84  E-value=6.6e-19  Score=153.25  Aligned_cols=223  Identities=17%  Similarity=0.092  Sum_probs=150.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--------   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------   78 (341)
                      ++||||||+|+||.++++.|+++|++|++++| +..+   .+.+..     .+++++.+|+.+.+.+.++++        
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r-~~~~---~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   73 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACR-KPDD---VARMNS-----LGFTGILLDLDDPESVERAADEVIALTDN   73 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHH---hHHHHh-----CCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999999999 6533   222222     157789999999877665543        


Q ss_pred             CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHH----HHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKI----ASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      .+|.+||+||.....     ..+.++..++.|+.++.++    ++++.+.+ .+++|++||.....+.            
T Consensus        74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~------------  140 (256)
T PRK08017         74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIST------------  140 (256)
T ss_pred             CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCC------------
Confidence            468999999864422     1334567899999988775    66666666 7899999997543321            


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                      .....|+.+|...|.+.+.++    ..+++++++|||.+..+.....          .. ....
T Consensus       141 ----------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~----------~~-~~~~  193 (256)
T PRK08017        141 ----------------PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNV----------NQ-TQSD  193 (256)
T ss_pred             ----------------CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcc----------cc-hhhc
Confidence                            124679999999998877653    4589999999988754421110          00 0001


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCC
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYP  288 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~  288 (341)
                      .........      .+.+++++|+++++..+++++.....+-    ...+..+...+.+.+|
T Consensus       194 ~~~~~~~~~------~~~~~~~~d~a~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~p  246 (256)
T PRK08017        194 KPVENPGIA------ARFTLGPEAVVPKLRHALESPKPKLRYP----VTLVTHAVMVLKRLLP  246 (256)
T ss_pred             cchhhhHHH------hhcCCCHHHHHHHHHHHHhCCCCCceee----cCcchHHHHHHHHHCC
Confidence            111111111      4568999999999999998765432331    1112245555666654

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.84  E-value=1e-18  Score=150.97  Aligned_cols=216  Identities=18%  Similarity=0.155  Sum_probs=150.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      ++||||||+|+||+++++.|++.|++|+++.| +... ...+...........+.++.+|+++++.+.++++       +
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r-~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYF-SGND-CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CcHH-HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999 6431 1111112222223468899999999988777664       4


Q ss_pred             CCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +|++||+|+.....     ..+.++..++.|+.++.++..+    +++.+ ..+||++||.....+..            
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~------------  147 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQF------------  147 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCC------------
Confidence            89999999975422     1444568889999999888554    45555 67999999986443211            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                      ....|+.+|.+.+.+++.++ +   .++++++++|+.+.++.....      .......+....
T Consensus       148 ----------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~------~~~~~~~~~~~~  205 (245)
T PRK12824        148 ----------------GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM------GPEVLQSIVNQI  205 (245)
T ss_pred             ----------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc------CHHHHHHHHhcC
Confidence                            13579999999998888876 2   389999999999987643322      111111111110


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                       .            ...+...+|+++++..++....  ..| ++++.++
T Consensus       206 -~------------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12824        206 -P------------MKRLGTPEEIAAAVAFLVSEAAGFITGETISINGG  241 (245)
T ss_pred             -C------------CCCCCCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence             0            3346678999999988885432  334 7777665

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.84  E-value=5.6e-19  Score=153.78  Aligned_cols=165  Identities=16%  Similarity=0.101  Sum_probs=124.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-CCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-GCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~Vi   84 (341)
                      +++||||||+|+||+++++.|++.|++|++++| +............  ....++.++.+|+++++.+.+++. ++|+||
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi   78 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQ-IAPQVTALRAEAA--RRGLALRVEKLDLTDAIDRAQAAEWDVDVLL   78 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHH--hcCCcceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence            368999999999999999999999999999999 7543222222111  122368899999999999998887 899999


Q ss_pred             EeccCCcccc-----chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCC
Q 019415           85 HVATPLQHID-----GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYT  155 (341)
Q Consensus        85 ~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~  155 (341)
                      |+|+......     .+.++..+++|+.++.++.+.    +.+.+ .++||++||.....+..                 
T Consensus        79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~-----------------  140 (257)
T PRK09291         79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGP-----------------  140 (257)
T ss_pred             ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCC-----------------
Confidence            9999754321     333457788898887766554    45556 68999999976433211                 


Q ss_pred             CCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeC
Q 019415          156 PPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAG  202 (341)
Q Consensus       156 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G  202 (341)
                                 ....|+.+|...|.+.+.+. +   .|++++++||+.+..
T Consensus       141 -----------~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t  180 (257)
T PRK09291        141 -----------FTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLT  180 (257)
T ss_pred             -----------CcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccc
Confidence                       13679999999999887765 2   499999999998744

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.7e-19  Score=154.59  Aligned_cols=163  Identities=17%  Similarity=0.104  Sum_probs=127.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      |++||||||+|+||+++++.|+++|++|++++| +...   .+.+.. ..  ...++++++|+++.+.+.++++      
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r-~~~~---~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   74 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDI-NEAG---LAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAAT   74 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CHHH---HHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            368999999999999999999999999999999 6543   222221 11  2468899999999988877654      


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||....++...        
T Consensus        75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~--------  145 (260)
T PRK08267         75 GGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPG--------  145 (260)
T ss_pred             CCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCC--------
Confidence              4699999999764322     344578899999999999888743    34 579999999876664322        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                          ...|+.+|...+.+.+.++ +   .++++++++|+.+..+
T Consensus       146 --------------------~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~  185 (260)
T PRK08267        146 --------------------LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA  185 (260)
T ss_pred             --------------------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence                                4679999999999888876 2   4899999999998654

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.83  E-value=8e-19  Score=150.93  Aligned_cols=210  Identities=18%  Similarity=0.162  Sum_probs=149.4

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |+..++++|+||||+|+||+++++.|++.|++|++++| +.......  ...+... .+++++.+|+.+++.+.++++  
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r-~~~~~~~~--~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~   76 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITAR-DQKELEEA--AAELNNK-GNVLGLAADVRDEADVQRAVDAI   76 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeC-CHHHHHHH--HHHHhcc-CcEEEEEccCCCHHHHHHHHHHH
Confidence            44444579999999999999999999999999999999 76432221  1122111 478899999999988877765  


Q ss_pred             -----CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                           ++|+|||+++.....     ..+.++..+++|+.++..+++++...   + .+++|++||.....+..       
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~-------  148 (237)
T PRK07326         77 VAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINISSLAGTNFFA-------  148 (237)
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEECChhhccCCC-------
Confidence                 689999999875432     13445678999999999998887643   3 57899999976433211       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.+|...+.+.+.+.    ..|++++++||+.+..+.....   +         
T Consensus       149 ---------------------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~---~---------  195 (237)
T PRK07326        149 ---------------------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT---P---------  195 (237)
T ss_pred             ---------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc---c---------
Confidence                                 13579999999888888764    3489999999999866532211   0         


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC--CceEEEec
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM--SGRFFCTN  271 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~g~~n~~~  271 (341)
                         .     . .       ....+..+|+++.+..++..+..  .+.+.+.+
T Consensus       196 ---~-----~-~-------~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~~~~  231 (237)
T PRK07326        196 ---S-----E-K-------DAWKIQPEDIAQLVLDLLKMPPRTLPSKIEVRP  231 (237)
T ss_pred             ---c-----h-h-------hhccCCHHHHHHHHHHHHhCCccccccceEEec
Confidence               0     0 0       01136789999999999976542  22445544

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.4e-18  Score=150.96  Aligned_cols=221  Identities=14%  Similarity=0.103  Sum_probs=150.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||+++++.|++.|++|++++| +.+.. .......+......+.++.+|+++++++.++++      
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r-~~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDL-RTDDG-LAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CcchH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999999998 65421 111112221223468889999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       +.|++||+||......     .+.++..+++|+.++..+++++.    +.+ ..++|++||.....+...         
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~---------  154 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRG---------  154 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCC---------
Confidence             3699999999754322     44567889999999988776653    344 579999999874442211         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .....|+.+|...+.+.+.++ +   .|+++.+++||.+.++.....    .... ....+..
T Consensus       155 -----------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~----~~~~-~~~~~~~  212 (254)
T PRK06114        155 -----------------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP----EMVH-QTKLFEE  212 (254)
T ss_pred             -----------------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc----cchH-HHHHHHh
Confidence                             013679999999999888886 3   489999999999977643211    1111 1111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..+             ..-+..++|++.++.+++....  ..| ++.+.++
T Consensus       213 ~~p-------------~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        213 QTP-------------MQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             cCC-------------CCCCcCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence            100             1225568999999999886432  345 4555443

>PRK12743 oxidoreductase; Provisional

Probab=99.83  E-value=9.3e-19  Score=152.35  Aligned_cols=217  Identities=14%  Similarity=0.079  Sum_probs=149.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++||||||+|.||.++++.|++.|++|+++.| +...  ..+.+ ..+......++++.+|+++++.++++++      
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWH-SDEE--GAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CChH--HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999988866 4322  11111 1111223478899999999988776654      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..+++|+.++..+++++...    ++-.++|++||.....+.           
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-----------  147 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL-----------  147 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC-----------
Confidence             5899999999755321     3456788999999999999887653    212589999997643321           


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .+...|+.+|...+.+++.++ +   .|++++.++||.+.++.....      ..........
T Consensus       148 -----------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~------~~~~~~~~~~  204 (256)
T PRK12743        148 -----------------PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD------DSDVKPDSRP  204 (256)
T ss_pred             -----------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc------ChHHHHHHHh
Confidence                             124689999999999988876 3   489999999999988743221      0111111110


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .   ..          ...+.+.+|+++++..++....  ..| .+.+.++
T Consensus       205 ~---~~----------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  242 (256)
T PRK12743        205 G---IP----------LGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDGG  242 (256)
T ss_pred             c---CC----------CCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            0   00          1224578999999998886543  356 4455544

>PRK08589 short chain dehydrogenase; Validated

Probab=99.83  E-value=1.2e-18  Score=153.00  Aligned_cols=229  Identities=14%  Similarity=0.077  Sum_probs=151.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|.||.++++.|++.|++|++++| + ....  +....+.....++.++.+|+++++++.++++  
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r-~-~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   76 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDI-A-EAVS--ETVDKIKSNGGKAKAYHVDISDEQQVKDFASEI   76 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-c-HHHH--HHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH
Confidence            56556789999999999999999999999999999999 6 3211  2222222223468899999999988777665  


Q ss_pred             -----CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                           ++|++||+||.....      ..+.++..+++|+.++..+++++...-  +-.++|++||.....+..       
T Consensus        77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  149 (272)
T PRK08589         77 KEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL-------  149 (272)
T ss_pred             HHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC-------
Confidence                 479999999975321      134456788899999887777654321  026899999987443221       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.+|...+.+++.++ +   .|+++..+.||.|..+.....  .......+...
T Consensus       150 ---------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~  206 (272)
T PRK08589        150 ---------------------YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKL--TGTSEDEAGKT  206 (272)
T ss_pred             ---------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhh--cccchhhHHHH
Confidence                                 13679999999999999887 3   389999999999976532211  00000001011


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .........+         ...+...+|+++++..++...  ...| .+.+.++
T Consensus       207 ~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        207 FRENQKWMTP---------LGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGG  251 (272)
T ss_pred             HhhhhhccCC---------CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence            1000000000         223567999999999988653  2345 4455444

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.2e-18  Score=151.21  Aligned_cols=219  Identities=16%  Similarity=0.126  Sum_probs=146.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++++|||||+|+||.++++.|++.|++|++..+.+.....  .....+......+..+.+|+.+.+.+..+++       
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAE--ETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHH--HHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            5799999999999999999999999999886540322211  1111111222457788999999765554332       


Q ss_pred             ------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                            ++|++||+||......     .+.++..+++|+.++..+++++...- ...++|++||.....+..        
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------  153 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP--------  153 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC--------
Confidence                  5899999999643221     33457888999999999998876542 135999999987543211        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.||...+.+++.++ +   .|+++..+.||.|.++.....  .+.  .. ....
T Consensus       154 --------------------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~--~~~--~~-~~~~  208 (252)
T PRK12747        154 --------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL--LSD--PM-MKQY  208 (252)
T ss_pred             --------------------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc--ccC--HH-HHHH
Confidence                                14689999999999998876 3   489999999999987743211  000  00 0111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ....   ..         ...+.+++|+++++.+++....  ..| .+.+.+
T Consensus       209 ~~~~---~~---------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdg  248 (252)
T PRK12747        209 ATTI---SA---------FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG  248 (252)
T ss_pred             HHhc---Cc---------ccCCCCHHHHHHHHHHHcCccccCcCCcEEEecC
Confidence            0000   00         2347789999999999886432  345 455544

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.83  E-value=1.5e-18  Score=156.20  Aligned_cols=200  Identities=16%  Similarity=0.137  Sum_probs=132.4

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++++|+||||+|+||.++++.|+++|++|++++| +..+....  ...+......+.++.+|+++.+++.++++  
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   77 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACR-NLKKAEAA--AQELGIPPDSYTIIHIDLGDLDSVRRFVDDF   77 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHH--HHHhhccCCceEEEEecCCCHHHHHHHHHHH
Confidence            66556789999999999999999999999999999999 75432211  11121112468899999999988887765  


Q ss_pred             -----CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhc----CC-cCEEEEecccccccCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKS----GT-VKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~-~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                           ++|++||+||.....      ..+.++..+++|+.++.++++++...    +. ..++|++||...+++..... 
T Consensus        78 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~-  156 (322)
T PRK07453         78 RALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGK-  156 (322)
T ss_pred             HHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCc-
Confidence                 389999999964321      13456788999999999998877542    21 25999999987544211000 


Q ss_pred             CCCCCCCCCCCCC--------CCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceEEEEecCceeCCC
Q 019415          143 AGYKDSIDETCYT--------PPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEVVALALGVVAGDT  204 (341)
Q Consensus       143 ~~~~~~~~E~~~~--------~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~~vlRp~~v~G~~  204 (341)
                      .....+.+..+..        +..........+...|+.||.+.+.+.+.++ +    .|++++.+|||.|++..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        157 IPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             cCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            0000000100000        0000000012346789999998877777765 3    37999999999998643

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.83  E-value=1.5e-18  Score=150.99  Aligned_cols=215  Identities=16%  Similarity=0.128  Sum_probs=151.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++|+||||+|+||+++++.|+++|++|++++| +.......  ...+......+.++.+|+++++.+.++++      
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGR-NAATLEAA--VAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH   86 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeC-CHHHHHHH--HHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999 75332211  11111222468899999999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       +.|+|||+|+......     .+.++..++.|+.++.++++++..    .+ ..++|++||.....+...         
T Consensus        87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~---------  156 (256)
T PRK06124         87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARAG---------  156 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCCC---------
Confidence             4699999999754321     345567899999999999866643    55 689999999865442211         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.+|...+.+++.++ +   .++++..++|+.+.++.....  ..  ...+...+..
T Consensus       157 -------------------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~--~~--~~~~~~~~~~  213 (256)
T PRK06124        157 -------------------DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAM--AA--DPAVGPWLAQ  213 (256)
T ss_pred             -------------------ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhh--cc--ChHHHHHHHh
Confidence                               3689999999999888876 3   389999999999988753221  00  0111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceEE
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRFF  268 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~n  268 (341)
                      . .   .         ...+++++|++.++..++....  ..|.+.
T Consensus       214 ~-~---~---------~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i  246 (256)
T PRK06124        214 R-T---P---------LGRWGRPEEIAGAAVFLASPAASYVNGHVL  246 (256)
T ss_pred             c-C---C---------CCCCCCHHHHHHHHHHHcCcccCCcCCCEE
Confidence            1 0   0         3347889999999999997653  346443

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.83  E-value=2.2e-18  Score=150.20  Aligned_cols=218  Identities=17%  Similarity=0.202  Sum_probs=151.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|.||.++++.|++.|++|+++.| + ...........  .....+.++.+|+++.+.+.++++      
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~-~-~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTH-G-TNWDETRRLIE--KEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-C-cHHHHHHHHHH--hcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999999999 6 32222222111  123468899999999988887776      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+|+......     .+.++..+++|+.++..+.+++.    +.+ ..++|++||...+.+..          
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  158 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGK----------  158 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCC----------
Confidence             5799999999754321     34566889999999887776654    444 57999999987543221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|.+.+.+++.++ +   .|+++.+++||.+..+.....   .. .......+..
T Consensus       159 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~---~~-~~~~~~~~~~  216 (258)
T PRK06935        159 ------------------FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPI---RA-DKNRNDEILK  216 (258)
T ss_pred             ------------------CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhc---cc-ChHHHHHHHh
Confidence                              13689999999999999887 3   389999999999877643211   00 0001111110


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .   .+          ...+...+|++.++.+++....  ..| ++.+.++
T Consensus       217 ~---~~----------~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  254 (258)
T PRK06935        217 R---IP----------AGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGG  254 (258)
T ss_pred             c---CC----------CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            0   00          3346778999999999886432  345 5555443

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.8e-18  Score=150.31  Aligned_cols=223  Identities=14%  Similarity=0.138  Sum_probs=150.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|.||.++++.|++.|++|++++| +..+.....  ..+.....++.++.+|++++++++++++  
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   77 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGAR-RQAELDQLV--AEIRAEGGEAVALAGDVRDEAYAKALVALA   77 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            45455689999999999999999999999999999999 754322221  1111222468899999999988887765  


Q ss_pred             -----CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                           ++|++||+||.....      ..+.++..+++|+.++..+.++    +++.+ ..++|++||...+... .    
T Consensus        78 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~-~----  151 (254)
T PRK07478         78 VERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAG-F----  151 (254)
T ss_pred             HHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccC-C----
Confidence                 589999999975321      1345678899999888777554    44454 5789999997643110 0    


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                            .....|+.||.+.+.+.+.++ +   .|+++..++||.+-.+.....   .. .....
T Consensus       152 ----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~-~~~~~  205 (254)
T PRK07478        152 ----------------------PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM---GD-TPEAL  205 (254)
T ss_pred             ----------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc---cC-CHHHH
Confidence                                  124689999999999999887 4   379999999999966532211   00 01111


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ..+... .   .         ...+...+|+++++++++....  ..| ++.+.+
T Consensus       206 ~~~~~~-~---~---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dg  247 (254)
T PRK07478        206 AFVAGL-H---A---------LKRMAQPEEIAQAALFLASDAASFVTGTALLVDG  247 (254)
T ss_pred             HHHHhc-C---C---------CCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCC
Confidence            111110 0   0         2235679999999999886532  345 444433

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.4e-18  Score=151.63  Aligned_cols=223  Identities=13%  Similarity=0.110  Sum_probs=153.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|.||+++++.|++.|++|++++| +....   +.+...  ....+.++++|+++++++.++++  
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~---~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDI-DADNG---AAVAAS--LGERARFIATDITDDAAIERAVATV   74 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHH---HHHHHH--hCCeeEEEEecCCCHHHHHHHHHHH
Confidence            66556789999999999999999999999999999999 75432   222111  12368899999999988877765  


Q ss_pred             -----CCCEEEEeccCCccc----cchhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI----DGYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                           .+|++||+|+.....    ..+.++..+++|+.++..+++++...  ..-.++|++||.....+...        
T Consensus        75 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~--------  146 (261)
T PRK08265         75 VARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTG--------  146 (261)
T ss_pred             HHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC--------
Confidence                 579999999964321    14456788999999999998876542  11468999999875553221        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                          ...|+.+|...+.+.+.++ +   .|+++..++||.+..+.....  ...... ......
T Consensus       147 --------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~--~~~~~~-~~~~~~  203 (261)
T PRK08265        147 --------------------RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDEL--SGGDRA-KADRVA  203 (261)
T ss_pred             --------------------CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhh--cccchh-HHHHhh
Confidence                                3579999999999998876 3   489999999998866532111  000000 000000


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..  . ..         ...+...+|+|+++.+++....  ..| .+.+.++
T Consensus       204 ~~--~-~p---------~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg  243 (261)
T PRK08265        204 AP--F-HL---------LGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGG  243 (261)
T ss_pred             cc--c-CC---------CCCccCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence            00  0 00         2235678999999999987532  345 5555544

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1e-18  Score=152.41  Aligned_cols=224  Identities=13%  Similarity=0.069  Sum_probs=151.1

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .+++++|||||+|.||.++++.|+++|++|++++| +.+...... .+... .....+.++++|+++++.+..+++    
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADL-DAALAERAAAAIARD-VAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc-cCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999 754322221 11110 123468899999999988887765    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++..+++++..    .+ ..++|++||.....+..        
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  153 (260)
T PRK07063         83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIP--------  153 (260)
T ss_pred             HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCC--------
Confidence               5899999999643221     445678899999999998888643    33 47999999986433211        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-CCCCchhhhhHhh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-SSTPVSVIGGLCQ  221 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-~~~~~~~~~~~~~  221 (341)
                                          ....|+.+|...+.+.+.++ +   .|+++..++||.+-.+..... ...+. .......
T Consensus       154 --------------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~  212 (260)
T PRK07063        154 --------------------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPD-PAAARAE  212 (260)
T ss_pred             --------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCC-hHHHHHH
Confidence                                14679999999999999886 3   389999999999865532110 00000 0000000


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ....   .+          ..-+...+|++.++++++....  ..| .+.+.++
T Consensus       213 ~~~~---~~----------~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg  253 (260)
T PRK07063        213 TLAL---QP----------MKRIGRPEEVAMTAVFLASDEAPFINATCITIDGG  253 (260)
T ss_pred             HHhc---CC----------CCCCCCHHHHHHHHHHHcCccccccCCcEEEECCC
Confidence            1000   00          2235678999999999987533  355 4444433

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.8e-18  Score=150.12  Aligned_cols=215  Identities=18%  Similarity=0.109  Sum_probs=150.8

Q ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            2 DHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         2 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ...+++++|||||+|.||+++++.|++.|++|++++| +...        .  .....++++++|+.+++++.++++   
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r-~~~~--------~--~~~~~~~~~~~D~~~~~~~~~~~~~~~   70 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGR-RAPE--------T--VDGRPAEFHAADVRDPDQVAALVDAIV   70 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-Chhh--------h--hcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            3445789999999999999999999999999999999 6532        0  112368899999999988887765   


Q ss_pred             ----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                          ++|+|||+||......     .+.++..+++|+.++..+++++...    +...++|++||.....+..       
T Consensus        71 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------  143 (252)
T PRK07856         71 ERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP-------  143 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC-------
Confidence                4699999998643221     3445688999999999999987642    1136899999987543221       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                           ....|+.+|...|.+++.++ +.  .+++..++||.+..+.....  ...  ......+
T Consensus       144 ---------------------~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~--~~~--~~~~~~~  198 (252)
T PRK07856        144 ---------------------GTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELH--YGD--AEGIAAV  198 (252)
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhh--ccC--HHHHHHH
Confidence                                 14689999999999999887 42  48999999999976632211  000  0011111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ....   .          ...+...+|++.++..++....  ..| .+.+.++
T Consensus       199 ~~~~---~----------~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg  238 (252)
T PRK07856        199 AATV---P----------LGRLATPADIAWACLFLASDLASYVSGANLEVHGG  238 (252)
T ss_pred             hhcC---C----------CCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCC
Confidence            1100   0          2235678999999999886532  456 4556543

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.9e-18  Score=149.56  Aligned_cols=217  Identities=18%  Similarity=0.213  Sum_probs=147.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|.||+++++.|++.|++|++++| +...           .....+.++.+|+.|++.+.++++      
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r-~~~~-----------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTAR-SRPD-----------DLPEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeC-Chhh-----------hcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 6432           112368899999999987765543      


Q ss_pred             -CCCEEEEeccCCcc-------ccchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQH-------IDGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ++|+|||+||....       ...+.++..+++|+.++.++.+++    ++.+ ..++|++||.....+..        
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~--------  146 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLP--------  146 (260)
T ss_pred             CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCC--------
Confidence             58999999995421       114456788999999998776654    4444 57899999976433211        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch-------h
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS-------V  215 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~-------~  215 (341)
                                         .....|+.+|...+.+++.++ +   .|+++.+++||.+.++.....  ...+       .
T Consensus       147 -------------------~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~--~~~~~~~~~~~~  205 (260)
T PRK06523        147 -------------------ESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVAL--AERLAEAAGTDY  205 (260)
T ss_pred             -------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHH--HHHHHhhcCCCH
Confidence                               124689999999999988887 3   489999999999988742211  0000       0


Q ss_pred             hhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          216 IGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ......+....   ....       ...+...+|+++++.+++...  ...| .+.+.++.
T Consensus       206 ~~~~~~~~~~~---~~~p-------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~  256 (260)
T PRK06523        206 EGAKQIIMDSL---GGIP-------LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGT  256 (260)
T ss_pred             HHHHHHHHHHh---ccCc-------cCCCCCHHHHHHHHHHHhCcccccccCceEEecCCc
Confidence            00000000000   0000       223557899999999998653  2345 67776653

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.7e-18  Score=149.94  Aligned_cols=196  Identities=17%  Similarity=0.141  Sum_probs=143.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhH-hhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDL-LKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++|||||+|+||++++++|+++|++|++++| +..+...... +... .....++++.+|+++++++.++++      
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCAR-RTDRLEELKAELLAR-YPGIKVAVAALDVNDHDQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhh-CCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999 7644222211 1111 112468899999999988776654      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+||......     .+..+..+++|+.++.++++++.    +.+ .++||++||.....+...         
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~---------  149 (248)
T PRK08251         80 GGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPG---------  149 (248)
T ss_pred             CCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCC---------
Confidence             5899999998754422     23345778999999998888764    445 679999999875443211         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        +...|+.||...+.+.+.+. +   .+++++.++|+.+.++.....               +
T Consensus       150 ------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---------------~  196 (248)
T PRK08251        150 ------------------VKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA---------------K  196 (248)
T ss_pred             ------------------CcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc---------------c
Confidence                              13679999999998888776 3   389999999999966532211               0


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      .               ....+..+|.|+++..++++.
T Consensus       197 ~---------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        197 S---------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             c---------------CCccCCHHHHHHHHHHHHhcC
Confidence            0               112567899999999999753

>PRK08643 acetoin reductase; Validated

Probab=99.83  E-value=8.4e-19  Score=152.63  Aligned_cols=168  Identities=21%  Similarity=0.184  Sum_probs=125.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++++|||||+|+||.++++.|+++|++|++++| +.........  .+.....++.++++|+++++.+.++++       
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r-~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDY-NEETAQAAAD--KLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--HHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999 6543222221  111122468889999999988777665       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+|+......     .+.++..+++|+.++..+++++...    +...++|++||....++...          
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----------  148 (256)
T PRK08643         79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE----------  148 (256)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC----------
Confidence            5899999998754321     3445678999999988777766542    21358999999875543211          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDT  204 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~  204 (341)
                                        ...|+.+|...+.+.+.++ +   .|++++.++|+.+.++.
T Consensus       149 ------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~  189 (256)
T PRK08643        149 ------------------LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM  189 (256)
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence                              4679999999988888776 3   48999999999997763

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2.9e-18  Score=149.17  Aligned_cols=219  Identities=15%  Similarity=0.123  Sum_probs=148.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+++||||+|.||+++++.|++.|++|+++.| +..  ...+.+..     .++.++.+|++|++++.++++      
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~-~~~--~~~~~l~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYN-SAE--NEAKELRE-----KGVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CcH--HHHHHHHh-----CCCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            4589999999999999999999999999998777 432  22222322     157889999999988887765      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHH----HHHHhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIA----SFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+||.....     ..+.++..+++|+.++..+.    ..+++.+ ..++|++||...+.+..          
T Consensus        78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~----------  146 (255)
T PRK06463         78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAA----------  146 (255)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCC----------
Confidence             589999999875321     13445688999999965554    4444444 57999999987443110          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .....|+.||.+.+.+++.++ +   .|+++..++||.+-.+...... .+.....+......
T Consensus       147 -----------------~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~  208 (255)
T PRK06463        147 -----------------EGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGK-SQEEAEKLRELFRN  208 (255)
T ss_pred             -----------------CCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhccc-CccchHHHHHHHHh
Confidence                             113679999999999999887 3   4899999999988554321110 00001111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ..       .      ...+...+|++++++.++....  ..| .+.+.++.
T Consensus       209 ~~-------~------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        209 KT-------V------LKTTGKPEDIANIVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             CC-------C------cCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            10       0      3345779999999999987543  345 56665553

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2.1e-18  Score=149.22  Aligned_cols=217  Identities=14%  Similarity=0.125  Sum_probs=150.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++|||+||+|+||.++++.|++.|++|+++ .| +........  ..+......+.++.+|+++++.+.++++     
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDI-NEEAAQELL--EEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHH--HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999998 78 654322111  1111123468899999999998877765     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+++......     .+.++..++.|+.++.++++++..    .+ .+++|++||...+++...        
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~--------  151 (247)
T PRK05565         81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGASC--------  151 (247)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCCC--------
Confidence              6899999999764321     344567899999998888777654    33 578999999875553221        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                          ...|+.+|...+.+++.++ +   .|++++++||+.+..+.....      .......+.
T Consensus       152 --------------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~------~~~~~~~~~  205 (247)
T PRK05565        152 --------------------EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSF------SEEDKEGLA  205 (247)
T ss_pred             --------------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccccc------ChHHHHHHH
Confidence                                3579999998888888776 2   489999999999876543322      111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..      ..       ...+...+|+++++..++....  .+| .+++.++
T Consensus       206 ~~------~~-------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        206 EE------IP-------LGRLGKPEEIAKVVLFLASDDASYITGQIITVDGG  244 (247)
T ss_pred             hc------CC-------CCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence            10      00       3346789999999999986543  345 4455543

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.2e-18  Score=150.10  Aligned_cols=191  Identities=16%  Similarity=0.132  Sum_probs=142.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC----CCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG----CDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~   82 (341)
                      ++++||||+|+||++++++|+++|++|++++| +...   .+.+...   ...+.++.+|+++++++.++++.    +|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r-~~~~---~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~   74 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGR-NQSV---LDELHTQ---SANIFTLAFDVTDHPGTKAALSQLPFIPEL   74 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEEC-CHHH---HHHHHHh---cCCCeEEEeeCCCHHHHHHHHHhcccCCCE
Confidence            57999999999999999999999999999999 6532   2222221   23688999999999999988864    689


Q ss_pred             EEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTP  156 (341)
Q Consensus        83 Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (341)
                      +||+|+.....     ..+.++..+++|+.++.++++++... .+..++|++||....++..                  
T Consensus        75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------------------  136 (240)
T PRK06101         75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALP------------------  136 (240)
T ss_pred             EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCC------------------
Confidence            99999854321     13345678999999999999998763 1136899999976444321                  


Q ss_pred             CCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccc
Q 019415          157 PDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTL  232 (341)
Q Consensus       157 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (341)
                                ....|+.+|...+.+.+.++    ..|++++.+|||.++++.....               ..     . 
T Consensus       137 ----------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~---------------~~-----~-  185 (240)
T PRK06101        137 ----------RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN---------------TF-----A-  185 (240)
T ss_pred             ----------CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC---------------CC-----C-
Confidence                      14579999999999988775    3489999999999988642221               00     0 


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                              ....+..+|+++.+...++..
T Consensus       186 --------~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        186 --------MPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             --------CCcccCHHHHHHHHHHHHhcC
Confidence                    111467899999999999863

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.82  E-value=2.9e-18  Score=149.04  Aligned_cols=207  Identities=13%  Similarity=0.068  Sum_probs=147.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      .++++|||||+|.||+++++.|++.|++|++++| +.......  ...+......+.++.+|+++++.+.++++      
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r-~~~~~~~~--~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDI-TAERAELA--VAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC-CHHHHHHH--HHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999999999999 65432222  11111222467889999999988887764      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+.....     ..+.++..+++|+.++..+++++..    .+ ..++|++||.....+..          
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----------  153 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGRD----------  153 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCCC----------
Confidence             479999999965322     1455678899999999888887764    33 57899999976433221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+++.++ +   .|+++.+++||.+..+.....  . . ...+......
T Consensus       154 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~--~-~-~~~~~~~~~~  211 (254)
T PRK08085        154 ------------------TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKAL--V-E-DEAFTAWLCK  211 (254)
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhh--c-c-CHHHHHHHHh
Confidence                              14679999999999999987 3   489999999999988743321  0 0 0111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                      ..    +         ...+...+|++.++..++..
T Consensus       212 ~~----p---------~~~~~~~~~va~~~~~l~~~  234 (254)
T PRK08085        212 RT----P---------AARWGDPQELIGAAVFLSSK  234 (254)
T ss_pred             cC----C---------CCCCcCHHHHHHHHHHHhCc
Confidence            10    0         23467799999999998874

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.6e-18  Score=148.29  Aligned_cols=215  Identities=13%  Similarity=0.042  Sum_probs=151.5

Q ss_pred             EEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC---CCEEEEe
Q 019415           10 CVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG---CDFVFHV   86 (341)
Q Consensus        10 lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~Vi~~   86 (341)
                      |||||+|+||+++++.|+++|++|++++| +.......  ...+. ...+++++.+|+++++.+.++++.   +|++||+
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r-~~~~~~~~--~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASR-SRDRLAAA--ARALG-GGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            69999999999999999999999999999 64332111  11111 124688999999999999988864   7999999


Q ss_pred             ccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           87 ATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        87 a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      ++.....     ..+..+.++++|+.++.+++++....+ ..++|++||..++.+..                       
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~~~-----------------------  132 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRPSA-----------------------  132 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCCCC-----------------------
Confidence            9975432     134567889999999999999666555 68999999987544221                       


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cC-CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhcc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEIL  239 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (341)
                           +.+.|+.+|...+.+++.++ +. +++++.++|+.+-.+.....  .+.....+........+            
T Consensus       133 -----~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~------------  193 (230)
T PRK07041        133 -----SGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKL--AGDAREAMFAAAAERLP------------  193 (230)
T ss_pred             -----cchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhh--hccchHHHHHHHHhcCC------------
Confidence                 24789999999999999987 43 68999999998865432111  00000111111111100            


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                       ...+...+|+|+++..++..+...| .|++.++
T Consensus       194 -~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gg  226 (230)
T PRK07041        194 -ARRVGQPEDVANAILFLAANGFTTGSTVLVDGG  226 (230)
T ss_pred             -CCCCcCHHHHHHHHHHHhcCCCcCCcEEEeCCC
Confidence             1124568999999999998665555 7787764

>PRK09242 tropinone reductase; Provisional

Probab=99.82  E-value=3.5e-18  Score=148.79  Aligned_cols=220  Identities=13%  Similarity=0.070  Sum_probs=151.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|++.|++|++++| +.+...... .+... ....++.++.+|+++++.+..+++     
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVAR-DADALAQARDELAEE-FPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 754422221 11111 112468889999999887766554     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+|+.....     ..+.++..+.+|+.++.++++++.    +.+ ..++|++||.....+..         
T Consensus        86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~---------  155 (257)
T PRK09242         86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVR---------  155 (257)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCC---------
Confidence              579999999974321     144567889999999999988874    344 57999999986443221         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.+|...+.+++.++ +   .++++..++||.+.++.....  .+  ...+.....
T Consensus       156 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~--~~--~~~~~~~~~  212 (257)
T PRK09242        156 -------------------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGP--LS--DPDYYEQVI  212 (257)
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccc--cC--ChHHHHHHH
Confidence                               24679999999999999876 3   489999999999988753322  11  111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ...+             ..-+...+|++.++..++....  ..| .+.+.++
T Consensus       213 ~~~~-------------~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        213 ERTP-------------MRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             hcCC-------------CCCCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            1100             1224568999999999886432  245 4455444

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.82  E-value=5.7e-18  Score=147.30  Aligned_cols=219  Identities=12%  Similarity=0.057  Sum_probs=153.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||.++++.|+++|++|++++| +..........  +.....+++++.+|+++.+++.++++      
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r-~~~~~~~~~~~--l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDE--IQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHH--HHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3589999999999999999999999999999988 65432222111  11112368889999999988777654      


Q ss_pred             -CCCEEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       ++|++||+|+......    .+.++..++.|+.++.++++++..    .+ ..++|++||.....+.            
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~------------  153 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN------------  153 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCC------------
Confidence             4799999999754321    344567799999999999999863    33 4699999997643321            


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                      .+...|+.+|.+.+.+++.++ +   .|+++.++.||.+..+.....     ..+.+.....+.
T Consensus       154 ----------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~-----~~~~~~~~~~~~  212 (255)
T PRK06113        154 ----------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-----ITPEIEQKMLQH  212 (255)
T ss_pred             ----------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc-----cCHHHHHHHHhc
Confidence                            124679999999999999886 3   389999999999876532211     112222222111


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      .+             ...+...+|+++++..++....  ..| ++++.++.
T Consensus       213 ~~-------------~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        213 TP-------------IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_pred             CC-------------CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            10             2236789999999999987532  245 66776653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.82  E-value=3.2e-18  Score=148.24  Aligned_cols=215  Identities=13%  Similarity=0.113  Sum_probs=142.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +++||||||+|+||+++++.|++.|++|+++.+.+.......  ...+......+.++.+|+++++++.++++       
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEET--ADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH--HHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999999999999987654032221111  11111122468899999999987776654       


Q ss_pred             CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhc-C-----CcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKS-G-----TVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~-~-----~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                      ++|+|||+||.....      ..+.++..+++|+.++..+++++... .     .-.+||++||....++...       
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-------  152 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN-------  152 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC-------
Confidence            589999999975321      13344677999999998887654332 1     0136999999875553211       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.+|...+.+++.++ +   .|++++++|||.+..+.....    . .+......
T Consensus       153 --------------------~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~----~-~~~~~~~~  207 (248)
T PRK06947        153 --------------------EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG----G-QPGRAARL  207 (248)
T ss_pred             --------------------CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc----C-CHHHHHHH
Confidence                                12469999999999888876 3   389999999999987743211    0 01111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceE
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRF  267 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~  267 (341)
                      ... .   .         ..-...++|++++++.++.++.  ..|.+
T Consensus       208 ~~~-~---~---------~~~~~~~e~va~~~~~l~~~~~~~~~G~~  241 (248)
T PRK06947        208 GAQ-T---P---------LGRAGEADEVAETIVWLLSDAASYVTGAL  241 (248)
T ss_pred             hhc-C---C---------CCCCcCHHHHHHHHHHHcCccccCcCCce
Confidence            000 0   0         1114568999999999887653  35533

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5e-18  Score=147.40  Aligned_cols=219  Identities=16%  Similarity=0.110  Sum_probs=150.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||.++++.|++.|++|++++| +.......  ...+......++++++|+.+.+.+..+++      
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSR-KLDGCQAV--ADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999 65432221  12221222357889999999988776654      


Q ss_pred             -CCCEEEEeccCCcc------ccchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQH------IDGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|++||+|+....      ...+.++..+++|+.++..+++++    ++.+ ..++|++||.....+..         
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---------  153 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGD---------  153 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCCC---------
Confidence             48999999985321      114445678999999999887776    3444 67999999976443221         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         +...|+.||..++.+++.++ +   .|+++..+.||.+..+.....  ...  ..+.....
T Consensus       154 -------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~--~~~--~~~~~~~~  210 (252)
T PRK07035        154 -------------------FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASAL--FKN--DAILKQAL  210 (252)
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccc--cCC--HHHHHHHH
Confidence                               24679999999999999887 3   389999999999865532211  000  11111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ...+             ...+...+|+++++..++....  ..| ++++.++
T Consensus       211 ~~~~-------------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        211 AHIP-------------LRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             ccCC-------------CCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            1100             2235668999999999887543  345 5555444

>PRK12742 oxidoreductase; Provisional

Probab=99.82  E-value=6.6e-18  Score=145.21  Aligned_cols=217  Identities=14%  Similarity=0.098  Sum_probs=147.8

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++++||||||+|.||+++++.|+++|++|+++.| +..  ...+.+...    .+++++.+|+++.+.+.+.++  
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~-~~~--~~~~~l~~~----~~~~~~~~D~~~~~~~~~~~~~~   73 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYA-GSK--DAAERLAQE----TGATAVQTDSADRDAVIDVVRKS   73 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC-CCH--HHHHHHHHH----hCCeEEecCCCCHHHHHHHHHHh
Confidence            66556789999999999999999999999999988766 432  222222221    135678899999887777765  


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                       ++|++||+|+......     .+.++..+++|+.++..++..+... ....++|++||.....           .+.  
T Consensus        74 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~--  140 (237)
T PRK12742         74 GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-----------MPV--  140 (237)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-----------CCC--
Confidence             4899999998754321     3456789999999999997666553 2136999999975311           000  


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                                    .+...|+.+|...|.+++.++ +   .|+++.+++||.+..+.....      .+ ....+...  
T Consensus       141 --------------~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~------~~-~~~~~~~~--  197 (237)
T PRK12742        141 --------------AGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN------GP-MKDMMHSF--  197 (237)
T ss_pred             --------------CCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc------cH-HHHHHHhc--
Confidence                          124689999999999998876 3   489999999999976532211      11 11111110  


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                       . .         ...+...+|+++++..++....  ..| .+.+.+
T Consensus       198 -~-~---------~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dg  233 (237)
T PRK12742        198 -M-A---------IKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDG  233 (237)
T ss_pred             -C-C---------CCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCC
Confidence             0 0         2235678999999999886532  345 444433

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.82  E-value=4.4e-18  Score=147.15  Aligned_cols=216  Identities=18%  Similarity=0.154  Sum_probs=146.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++.+|||||+|+||+++++.|++.|++|++..+ +... ...+.+..+......+.++.+|+.|.+.+.++++       
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCG-PNSP-RRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcC-CChH-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999888654 3222 2222222222223467788999999988877664       


Q ss_pred             CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+|+.....     ..+.++..+++|+.++..+.+++    .+.+ ..++|++||.....+..           
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----------  148 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF-----------  148 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCC-----------
Confidence            589999999975421     13456788999999977766554    4445 67999999976433211           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       ....|+.+|...+.+.+.++ +   .|+++..++|+.+.++.....      .+.....+...
T Consensus       149 -----------------~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~------~~~~~~~~~~~  205 (246)
T PRK12938        149 -----------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI------RPDVLEKIVAT  205 (246)
T ss_pred             -----------------CChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc------ChHHHHHHHhc
Confidence                             24689999999888887776 2   489999999999977643221      12222222111


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      .       .      ...+...+|++.++..++....  ..| .+.+.+
T Consensus       206 ~-------~------~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~  241 (246)
T PRK12938        206 I-------P------VRRLGSPDEIGSIVAWLASEESGFSTGADFSLNG  241 (246)
T ss_pred             C-------C------ccCCcCHHHHHHHHHHHcCcccCCccCcEEEECC
Confidence            1       0      3346678999999999886532  344 555544

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.7e-18  Score=150.91  Aligned_cols=194  Identities=16%  Similarity=0.084  Sum_probs=141.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|.||+++++.|+++|++|++++| +...   .+.+....   ..++++.+|+++++++.++++      
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r-~~~~---~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   76 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALGARVAIGDL-DEAL---AKETAAEL---GLVVGGPLDVTDPASFAAFLDAVEADL   76 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHHh---ccceEEEccCCCHHHHHHHHHHHHHHc
Confidence            3579999999999999999999999999999988 6543   22221110   157889999999988766554      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+..+..+++|+.++..+++++    .+.+ ..++|++||.....+..          
T Consensus        77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  145 (273)
T PRK07825         77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVP----------  145 (273)
T ss_pred             CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCC----------
Confidence             5799999999754322     3345678999999888877665    4455 67999999987543221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+.+.+.    +.|+++++++|+.+-.+.....                
T Consensus       146 ------------------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~----------------  191 (273)
T PRK07825        146 ------------------GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT----------------  191 (273)
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc----------------
Confidence                              14679999998887766654    3489999999998854321110                


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                        .    ...      ...++..+|+|+++..++.++.
T Consensus       192 --~----~~~------~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        192 --G----GAK------GFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             --c----ccc------CCCCCCHHHHHHHHHHHHhCCC
Confidence              0    000      3457889999999999998654

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.82  E-value=7e-18  Score=144.78  Aligned_cols=206  Identities=17%  Similarity=0.087  Sum_probs=144.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------C
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------G   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   79 (341)
                      .|+||||||+|+||+++++.|+++|++|+++.| +...        ..     ..+++.+|+++++.+.++++      +
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r-~~~~--------~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   68 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIAR-SAID--------DF-----PGELFACDLADIEQTAATLAQINEIHP   68 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeC-Cccc--------cc-----CceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999 6542        11     12578999999988877765      5


Q ss_pred             CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +|+|||+|+......     .+.++..++.|+.++.++.+++    ++.+ ..++|++||.. .++..            
T Consensus        69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~-~~~~~------------  134 (234)
T PRK07577         69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRA-IFGAL------------  134 (234)
T ss_pred             CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccc-ccCCC------------
Confidence            899999999755422     3345577889999988886665    3455 67999999986 33221            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                      ....|+.+|...|.+++.++ +   .|++++++|||.+..+.....  .+. ............
T Consensus       135 ----------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~--~~~-~~~~~~~~~~~~  195 (234)
T PRK07577        135 ----------------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQT--RPV-GSEEEKRVLASI  195 (234)
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccc--ccc-chhHHHHHhhcC
Confidence                            14689999999999988876 2   489999999999987643221  010 011111111110


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                            .       ...+...+|++.++..++..+.  ..| .+.+.+
T Consensus       196 ------~-------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g  230 (234)
T PRK07577        196 ------P-------MRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDG  230 (234)
T ss_pred             ------C-------CCCCcCHHHHHHHHHHHhCcccCCccceEEEecC
Confidence                  0       1224568999999999987542  345 555544

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.8e-18  Score=150.83  Aligned_cols=161  Identities=19%  Similarity=0.146  Sum_probs=124.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +|++|||||+|+||+++++.|++.|++|++++| +...   .+.+..     .+++++.+|+++++.+.++++       
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r-~~~~---~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   71 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATAR-KAED---VEALAA-----AGFTAVQLDVNDGAALARLAEELEAEHG   71 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHH-----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            368999999999999999999999999999999 6533   222222     256789999999988877664       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh---cCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK---SGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      ++|+|||+||......     .+.++..+++|+.++.++++++..   .+ ..++|++||.....+..            
T Consensus        72 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~------------  138 (274)
T PRK05693         72 GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTP------------  138 (274)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCC------------
Confidence            5899999999654321     345568899999999999888743   23 46899999976544221            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCC
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDT  204 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~  204 (341)
                                      ....|+.+|...+.+.+.++ +   .|+++++++||.|..+.
T Consensus       139 ----------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~  180 (274)
T PRK05693        139 ----------------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF  180 (274)
T ss_pred             ----------------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence                            14679999999999887776 3   59999999999997663

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.8e-18  Score=147.58  Aligned_cols=219  Identities=14%  Similarity=0.114  Sum_probs=150.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||.++++.|++.|++|+++.| +........  ..+.....++.++.+|+++++.+.++++      
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAAR-HLDALEKLA--DEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHH--HHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999 654322221  1122223468889999999988877664      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+|+......     .+.++..+++|+.++..+++++...    +.-.++|++||.....+..+         
T Consensus        85 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------  155 (253)
T PRK05867         85 GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVP---------  155 (253)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCC---------
Confidence             6899999999754322     4455678899999999998887532    21247999998753221100         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .....|+.+|...+.+.+.++ +   .|+++..++||.+-.+.....       ......+..
T Consensus       156 -----------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~-------~~~~~~~~~  211 (253)
T PRK05867        156 -----------------QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY-------TEYQPLWEP  211 (253)
T ss_pred             -----------------CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc-------hHHHHHHHh
Confidence                             013579999999999999987 3   389999999999966532211       111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..   .          ...+...+|+|+++.+++....  ..| ++.+.++
T Consensus       212 ~~---~----------~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG  249 (253)
T PRK05867        212 KI---P----------LGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGG  249 (253)
T ss_pred             cC---C----------CCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCC
Confidence            10   0          2236679999999999986432  345 4455443

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.81  E-value=5.4e-18  Score=148.18  Aligned_cols=218  Identities=15%  Similarity=0.114  Sum_probs=148.1

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ..++++||||||+|.||.++++.|++.|++|++++| +.+.....  ...+.....+++++.+|+++++++.++++    
T Consensus         6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASR-SQEKVDAA--VAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999 75432221  11111112367889999999988877764    


Q ss_pred             ---CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                         ++|++||+|+.....     ..+.++..+++|+.++.++++++...  .+..++|++||.....+..          
T Consensus        83 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~----------  152 (264)
T PRK07576         83 EFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMP----------  152 (264)
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCC----------
Confidence               479999999754321     14455678899999999999887653  1126999999976433211          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...|.+++.++ +   .|++++.++|+.+.+...... ..+.  .........
T Consensus       153 ------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~-~~~~--~~~~~~~~~  211 (264)
T PRK07576        153 ------------------MQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMAR-LAPS--PELQAAVAQ  211 (264)
T ss_pred             ------------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhh-cccC--HHHHHHHHh
Confidence                              14689999999999999886 3   489999999999875321110 0000  000000100


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceE
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRF  267 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~  267 (341)
                      .   .   .       ...+...+|+++++..++....  ..|.+
T Consensus       212 ~---~---~-------~~~~~~~~dva~~~~~l~~~~~~~~~G~~  243 (264)
T PRK07576        212 S---V---P-------LKRNGTKQDIANAALFLASDMASYITGVV  243 (264)
T ss_pred             c---C---C-------CCCCCCHHHHHHHHHHHcChhhcCccCCE
Confidence            0   0   0       3346779999999999997532  35533

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=5.4e-18  Score=147.18  Aligned_cols=216  Identities=16%  Similarity=0.132  Sum_probs=148.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-----   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----   79 (341)
                      ++++||||||+|+||+++++.|++.|++|++..| +..  ...+.+...  ...++.++.+|+.+++++.++++.     
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~-~~~--~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYH-QSE--DAAEALADE--LGDRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC-CCH--HHHHHHHHH--hCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999988666 432  222222221  124688999999999888877652     


Q ss_pred             ---CCEEEEeccCCc---------cc--cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCC
Q 019415           80 ---CDFVFHVATPLQ---------HI--DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        80 ---~d~Vi~~a~~~~---------~~--~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                         +|++||+|+...         ..  ..+.+...++.|+.++.++++++..    .+ ..++|++||.....+     
T Consensus        79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~-----  152 (253)
T PRK08642         79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQNP-----  152 (253)
T ss_pred             CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccCC-----
Confidence               899999998531         01  1344567899999999999999853    33 579999999642111     


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                             ..+...|+.+|...|.+++.++ +   .|+++..++||.+..+.....  .   ...
T Consensus       153 -----------------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~---~~~  204 (253)
T PRK08642        153 -----------------------VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--T---PDE  204 (253)
T ss_pred             -----------------------CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--C---CHH
Confidence                                   0124689999999999999987 4   489999999999866532111  0   111


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....+....      .       ...+.+.+|+++++..++...  ...| .+.+.++
T Consensus       205 ~~~~~~~~~------~-------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        205 VFDLIAATT------P-------LRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             HHHHHHhcC------C-------cCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            111111110      0       234788999999999999753  2455 5555444

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.7e-18  Score=150.98  Aligned_cols=228  Identities=17%  Similarity=0.145  Sum_probs=155.3

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYI-VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |...++++|+|+||+|.||+++++.|++.|++ |+++.| +..+....  ...+......+.++.+|+++++.+.++++ 
T Consensus         1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (260)
T PRK06198          1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGR-NAEKGEAQ--AAELEALGAKAVFVQADLSDVEDCRRVVAA   77 (260)
T ss_pred             CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcC-CHHHHHHH--HHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            55556789999999999999999999999999 999988 65432211  11111223468889999999988877765 


Q ss_pred             ------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                            ++|+|||+|+.....     ..+.++..+++|+.++.++++++...    +...++|++||...+.+..     
T Consensus        78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-----  152 (260)
T PRK06198         78 ADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP-----  152 (260)
T ss_pred             HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC-----
Confidence                  579999999975421     13445678999999999998887542    2135799999987543221     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-CCCCchhhhh
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-SSTPVSVIGG  218 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-~~~~~~~~~~  218 (341)
                                             ....|+.+|...|.+.+.++ +   .+++++.++|+.++++..... .........+
T Consensus       153 -----------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~  209 (260)
T PRK06198        153 -----------------------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDW  209 (260)
T ss_pred             -----------------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHH
Confidence                                   14679999999999988876 3   379999999999988753211 0000001111


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ........       .      ...+++++|+++++.+++....  ..| .+++.++
T Consensus       210 ~~~~~~~~-------~------~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        210 LEKAAATQ-------P------FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             HHHHhccC-------C------ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCc
Confidence            11111110       0      3447889999999999886543  345 5666554

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.81  E-value=7e-18  Score=152.13  Aligned_cols=211  Identities=16%  Similarity=0.089  Sum_probs=145.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++|+||||+|.||.++++.|+++|++|++++| +........  ..+......+.++.+|++|+++++++++      
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R-~~~~l~~~~--~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLAR-GEEGLEALA--AEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            3578999999999999999999999999999999 754322211  1111223468899999999988887754      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+|+......     .+.++..+++|+.+..++..+    +.+.+ ..+||++||...+.+..          
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~----------  152 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIP----------  152 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCC----------
Confidence             5899999999643321     445567888887777665444    45554 57999999987543211          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                        ....|+.+|...+.+.+.++ +     .++++++++|+.+..+...          .....+
T Consensus       153 ------------------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~----------~~~~~~  204 (334)
T PRK07109        153 ------------------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD----------WARSRL  204 (334)
T ss_pred             ------------------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh----------hhhhhc
Confidence                              14689999999888877765 2     3699999999998665211          110001


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN  271 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~  271 (341)
                       ....     ..      ...+...+|+|++++.++.++  ...+.+++
T Consensus       205 -~~~~-----~~------~~~~~~pe~vA~~i~~~~~~~--~~~~~vg~  239 (334)
T PRK07109        205 -PVEP-----QP------VPPIYQPEVVADAILYAAEHP--RRELWVGG  239 (334)
T ss_pred             -cccc-----cC------CCCCCCHHHHHHHHHHHHhCC--CcEEEeCc
Confidence             0000     00      234667999999999999865  23455543

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.3e-18  Score=147.72  Aligned_cols=195  Identities=15%  Similarity=0.117  Sum_probs=142.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----CC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----GC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~   80 (341)
                      ||+|+||||+|+||.++++.|++.|++|++++| +.++.... +.+...  ...+++++++|+++++.+.++++    ++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAAR-DVERLERLADDLRAR--GAVAVSTHELDILDTASHAAFLDSLPALP   77 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHHHHHHHHh--cCCeEEEEecCCCChHHHHHHHHHHhhcC
Confidence            468999999999999999999999999999999 76432211 111111  12478999999999988887765    46


Q ss_pred             CEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      |+|||+|+......     .+.+...++.|+.++.++++++..    .+ ..++|++||.....+..             
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~-------------  143 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGRA-------------  143 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCCC-------------
Confidence            99999998654322     333456789999999999888654    34 67999999976433211             


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                                     ....|+.+|...+.+.+.++    +.|+++..++|+.+.++.....               .   
T Consensus       144 ---------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~---------------~---  190 (243)
T PRK07102        144 ---------------SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL---------------K---  190 (243)
T ss_pred             ---------------CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc---------------C---
Confidence                           13579999999998888875    3489999999999987632111               0   


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                       . .         ...++.++|+++.+..+++++
T Consensus       191 -~-~---------~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        191 -L-P---------GPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             -C-C---------ccccCCHHHHHHHHHHHHhCC
Confidence             0 0         122566899999999999854

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.9e-18  Score=146.61  Aligned_cols=220  Identities=15%  Similarity=0.099  Sum_probs=150.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||++++++|+++|++|++++| +........  ..+......+.++.+|+++++.+..+++      
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADR-DAAGGEETV--ALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHH--HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999 764322221  1112223468899999999988877765      


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|+|||+|+.....      ..+.++..+++|+.++..+++++    .+.+ ..++|++||...+.+..         
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~---------  152 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAP---------  152 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCC---------
Confidence             469999999964321      13455678999999998776654    3344 57899999987554321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.+|...+.+.+.++ +   .|+++..++||.+-.+.....  ... .........
T Consensus       153 -------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~--~~~-~~~~~~~~~  210 (253)
T PRK06172        153 -------------------KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA--YEA-DPRKAEFAA  210 (253)
T ss_pred             -------------------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh--ccc-ChHHHHHHh
Confidence                               14689999999999998887 3   389999999999865532211  000 011111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...+             ...+...+|+++.+.+++...  ...| .+++.++
T Consensus       211 ~~~~-------------~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg  249 (253)
T PRK06172        211 AMHP-------------VGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGG  249 (253)
T ss_pred             ccCC-------------CCCccCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            1100             223567899999999998754  2356 4455544

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.9e-18  Score=149.80  Aligned_cols=222  Identities=16%  Similarity=0.080  Sum_probs=149.7

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++++++||||+|+||+++++.|+++|++|++++| +.........+..   ....+.++.+|+.+++++.++++  
T Consensus         1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~   76 (263)
T PRK08226          1 MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDI-SPEIEKLADELCG---RGHRCTAVVADVRDPASVAAAIKRA   76 (263)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecC-CHHHHHHHHHHHH---hCCceEEEECCCCCHHHHHHHHHHH
Confidence            44445689999999999999999999999999999999 6532122222221   12367889999999988877765  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|+|||+|+......     .+.++..+++|+.++..+++++..    .+ ..++|++||........      
T Consensus        77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------  149 (263)
T PRK08226         77 KEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVAD------  149 (263)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCC------
Confidence                 5799999999754322     334567799999999999888653    33 56899999975321000      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC--CCCCchhhhh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY--SSTPVSVIGG  218 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~--~~~~~~~~~~  218 (341)
                                           .....|+.+|...|.+++.++ +   .++++..++||.+.++.....  ...+.....+
T Consensus       150 ---------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~  208 (263)
T PRK08226        150 ---------------------PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESV  208 (263)
T ss_pred             ---------------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHH
Confidence                                 113679999999999998886 3   389999999999988732211  0000001112


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCceE
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSGRF  267 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g~~  267 (341)
                      ...+....+             ...+...+|+++++..++...  ...|..
T Consensus       209 ~~~~~~~~p-------------~~~~~~~~~va~~~~~l~~~~~~~~~g~~  246 (263)
T PRK08226        209 LTEMAKAIP-------------LRRLADPLEVGELAAFLASDESSYLTGTQ  246 (263)
T ss_pred             HHHHhccCC-------------CCCCCCHHHHHHHHHHHcCchhcCCcCce
Confidence            222221110             223567999999998887543  345533

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=6.8e-18  Score=144.96  Aligned_cols=209  Identities=13%  Similarity=0.104  Sum_probs=147.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~V   83 (341)
                      ++++++||||+|+||+++++.|+++|++|++++| +...           ....++.++.+|++++ +.+.+.+.++|+|
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r-~~~~-----------~~~~~~~~~~~D~~~~~~~~~~~~~~id~l   71 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDK-QDKP-----------DLSGNFHFLQLDLSDDLEPLFDWVPSVDIL   71 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeC-Cccc-----------ccCCcEEEEECChHHHHHHHHHhhCCCCEE
Confidence            4579999999999999999999999999999998 6432           1123688999999987 4455555679999


Q ss_pred             EEeccCCcc----c--cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQH----I--DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        84 i~~a~~~~~----~--~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                      ||+|+....    .  ..+.++..+++|+.++.++++++..    .+ ..++|++||.....+...              
T Consensus        72 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~--------------  136 (235)
T PRK06550         72 CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGGG--------------  136 (235)
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCC--------------
Confidence            999986421    1  1445678899999999999888754    33 468999999875443211              


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccc
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVY  229 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (341)
                                    ...|+.+|...+.+.+.++ +   .|+++++++|+.+.++.....  .+.  ..+........   
T Consensus       137 --------------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~--~~~--~~~~~~~~~~~---  195 (235)
T PRK06550        137 --------------GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAAD--FEP--GGLADWVARET---  195 (235)
T ss_pred             --------------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccc--cCc--hHHHHHHhccC---
Confidence                          3579999999888888776 3   389999999999987753322  110  11111111110   


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTN  271 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~  271 (341)
                       .         ...+...+|+|++++.++...  ...| ++.+.+
T Consensus       196 -~---------~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~g  230 (235)
T PRK06550        196 -P---------IKRWAEPEEVAELTLFLASGKADYMQGTIVPIDG  230 (235)
T ss_pred             -C---------cCCCCCHHHHHHHHHHHcChhhccCCCcEEEECC
Confidence             0         334677899999999998643  2345 444543

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.9e-18  Score=147.00  Aligned_cols=214  Identities=16%  Similarity=0.121  Sum_probs=149.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      .+++||||||+|+||+++++.|++.|++|+++.| +.+.......  .+.....+++++.+|+++++++.++++      
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r-~~~~~~~~~~--~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASR-RVERLKELRA--EIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            3589999999999999999999999999999999 7543222211  111123468899999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----C-------CcCEEEEecccccccCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----G-------TVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~-------~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                       ++|+|||+|+......     .+.++..++.|+.++..+++++...    .       ...++|++||.....+.    
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----  160 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL----  160 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC----
Confidence             5899999999654321     3445678999999999998877532    1       02589999998643321    


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                              .....|+.+|...+.+++.++ +   .++++++++||.++++.....     +...
T Consensus       161 ------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~-----~~~~  211 (258)
T PRK06949        161 ------------------------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHH-----WETE  211 (258)
T ss_pred             ------------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhc-----cChH
Confidence                                    124689999999999998886 3   489999999999988754321     1111


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceE
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRF  267 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~  267 (341)
                      ....+...   ..          ...+...+|+++++.+++....  ..|..
T Consensus       212 ~~~~~~~~---~~----------~~~~~~p~~~~~~~~~l~~~~~~~~~G~~  250 (258)
T PRK06949        212 QGQKLVSM---LP----------RKRVGKPEDLDGLLLLLAADESQFINGAI  250 (258)
T ss_pred             HHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhChhhcCCCCcE
Confidence            11111111   00          2345668999999999887432  45544

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=5.1e-18  Score=147.29  Aligned_cols=217  Identities=16%  Similarity=0.139  Sum_probs=150.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||.++++.|++.|++|++++| +.......  ..........+.++++|+.+++.+.++++      
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDL-NQEKLEEA--VAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999998 65332211  11111223468889999999887766554      


Q ss_pred             -CCCEEEEeccCCccc--------------cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCC
Q 019415           79 -GCDFVFHVATPLQHI--------------DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKE  139 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~--------------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~  139 (341)
                       ++|+|||+|+.....              ..+.++..++.|+.++..+..++.    +...-.++|++||.. .++.. 
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~-  158 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNM-  158 (253)
T ss_pred             CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCC-
Confidence             479999999964321              123456778899999987765443    222135789999875 33221 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchh
Q 019415          140 DGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSV  215 (341)
Q Consensus       140 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~  215 (341)
                                                 +...|+.+|...+.+++.++ +   .+++++.++|+.+.++.....      .
T Consensus       159 ---------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~------~  205 (253)
T PRK08217        159 ---------------------------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM------K  205 (253)
T ss_pred             ---------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc------C
Confidence                                       14679999999999988886 3   489999999999987754322      1


Q ss_pred             hhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          216 IGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      +.+........       .      ...+.+++|+++++..++......| +|++.++
T Consensus       206 ~~~~~~~~~~~-------~------~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg  250 (253)
T PRK08217        206 PEALERLEKMI-------P------VGRLGEPEEIAHTVRFIIENDYVTGRVLEIDGG  250 (253)
T ss_pred             HHHHHHHHhcC-------C------cCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCC
Confidence            22222221111       0      3446789999999999997654456 7787664

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=8e-18  Score=146.48  Aligned_cols=217  Identities=17%  Similarity=0.088  Sum_probs=146.9

Q ss_pred             CCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCC---------chhhhhHhhhCCCCCCceEEEecCCCChHHH
Q 019415            5 SNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLE---------DKSKVDLLKSLPGAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         5 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   73 (341)
                      ++++||||||+|  .||.++++.|+++|++|+++.| +..         ..........+......++++.+|+++++++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYW-SPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcC-CccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            457899999996  6999999999999999999998 622         1111111111122234689999999998877


Q ss_pred             HHHhc-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC---CcCEEEEecccccccCCC
Q 019415           74 ENAIQ-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG---TVKRLIYTASVLCASPLK  138 (341)
Q Consensus        74 ~~~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~  138 (341)
                      .++++       ++|+|||+|+......     .+.++..+++|+.++..+++++....   ..+++|++||...+.+..
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~  162 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP  162 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence            66654       4799999998754322     23456779999999999999886431   146899999986433211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch
Q 019415          139 EDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS  214 (341)
Q Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~  214 (341)
                                                  ....|+.+|.+.+.+++.++ +   .+++++.++||.+..+....       
T Consensus       163 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-------  207 (256)
T PRK12748        163 ----------------------------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-------  207 (256)
T ss_pred             ----------------------------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-------
Confidence                                        13679999999999988876 3   48999999999876553211       


Q ss_pred             hhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          215 VIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                        ..........   .          ...+...+|+++++.+++....  ..| ++++.++
T Consensus       208 --~~~~~~~~~~---~----------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        208 --ELKHHLVPKF---P----------QGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             --hHHHhhhccC---C----------CCCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence              1111111110   0          1224457999999998886532  345 5566543

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.3e-17  Score=145.13  Aligned_cols=214  Identities=16%  Similarity=0.128  Sum_probs=144.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||.++++.|+++|++|++++| +...   .+.. ..+     ..+++++|+++++.+.++++     
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r-~~~~---~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDI-DPEA---GKAAADEV-----GGLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHHc-----CCcEEEeeCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 6532   2111 111     12578999999988887775     


Q ss_pred             --CCCEEEEeccCCccc-------cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-------DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                        ++|+|||+|+.....       ..+.++..+++|+.++..+++++.    +.+ ..++|++||....++...      
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~------  149 (255)
T PRK06057         77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSAT------  149 (255)
T ss_pred             cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCC------
Confidence              579999999875321       133456889999999988777664    344 568999999754443211      


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.+|...+.+.+.++    ..|++++++|||.+.++.....  .........+.
T Consensus       150 ---------------------~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~  206 (255)
T PRK06057        150 ---------------------SQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL--FAKDPERAARR  206 (255)
T ss_pred             ---------------------CCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh--ccCCHHHHHHH
Confidence                                 13579999987777766554    3489999999999987743321  00001111010


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      +.    ..   .       ...+..++|+++++..++....  ..| .+.+.+
T Consensus       207 ~~----~~---~-------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~  245 (255)
T PRK06057        207 LV----HV---P-------MGRFAEPEEIAAAVAFLASDDASFITASTFLVDG  245 (255)
T ss_pred             Hh----cC---C-------CCCCcCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence            10    00   0       2347889999999988886532  234 455544

>PRK06196 oxidoreductase; Provisional

Probab=99.81  E-value=2.9e-18  Score=153.71  Aligned_cols=177  Identities=14%  Similarity=0.100  Sum_probs=126.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||.++++.|+++|++|++++| +......  ....+    ..++++.+|++|.++++++++      
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R-~~~~~~~--~~~~l----~~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPAR-RPDVARE--ALAGI----DGVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHH--HHHHh----hhCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999999 7543211  11122    147889999999988877664      


Q ss_pred             -CCCEEEEeccCCcccc---chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID---GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~---~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                       ++|+|||+||......   .+.++..+++|+.++..++++    +.+.+ ..++|++||.....+...         .+
T Consensus        98 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~---------~~  167 (315)
T PRK06196         98 RRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIR---------WD  167 (315)
T ss_pred             CCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCC---------cc
Confidence             5899999999754321   334568899999997666554    44554 579999999763321111         11


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCC
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTN  205 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~  205 (341)
                      +.++..       ...+...|+.||.+.+.+.+.++    ..|+++++++||.+.++..
T Consensus       168 ~~~~~~-------~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~  219 (315)
T PRK06196        168 DPHFTR-------GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ  219 (315)
T ss_pred             ccCccC-------CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence            100000       01235789999999999888775    3489999999999988854

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.81  E-value=8.4e-18  Score=142.82  Aligned_cols=206  Identities=18%  Similarity=0.179  Sum_probs=151.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CC-CCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LP-GAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |...+++++||||||+-||.+++++|+++|++|+.+.| +.++   +..+.. +. .....++++++|+++++++..+.+
T Consensus         1 ~~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR-~~~k---L~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~   76 (265)
T COG0300           1 PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVAR-REDK---LEALAKELEDKTGVEVEVIPADLSDPEALERLED   76 (265)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-cHHH---HHHHHHHHHHhhCceEEEEECcCCChhHHHHHHH
Confidence            34456789999999999999999999999999999999 7654   333322 11 123578999999999988888764


Q ss_pred             -------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                             .+|+.||+||......     .+...+++++|+.+...+..+    +.+.+ -..+|+++|.+++.+.+.   
T Consensus        77 ~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~---  152 (265)
T COG0300          77 ELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPY---  152 (265)
T ss_pred             HHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcc---
Confidence                   5899999999876653     445578899999888777555    45555 578999999986554322   


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                               ...|+.||...-.+-..+.    ..|+.++.+-||.+..+.....          
T Consensus       153 -------------------------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~----------  197 (265)
T COG0300         153 -------------------------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK----------  197 (265)
T ss_pred             -------------------------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc----------
Confidence                                     5899999998766666655    3489999999999976643210          


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                        .  ........         .+-++..+|+|+..+.++.+.+
T Consensus       198 --~--~~~~~~~~---------~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         198 --G--SDVYLLSP---------GELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             --c--cccccccc---------hhhccCHHHHHHHHHHHHhcCC
Confidence              0  00000001         4457889999999999998643

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.81  E-value=6.3e-18  Score=147.19  Aligned_cols=225  Identities=15%  Similarity=0.151  Sum_probs=147.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC-chhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE-DKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      +++++|||||+|+||.++++.|++.|++|.++.+ +.. .....+.+ ..+......+.++++|+++++.+.++++    
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHY-NSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEec-CCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            3579999999999999999999999999777766 432 22222221 1111123468899999999988887765    


Q ss_pred             ---CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEe-cccccccCCCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYT-ASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~-Ss~~~~~~~~~~~~~~~~~~  148 (341)
                         ++|++||+||.....     ..+.++..+++|+.++..+++++...- ...+++++ ||....+.            
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~------------  153 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT------------  153 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC------------
Confidence               589999999974321     144466889999999999999986541 12456665 44322110            


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .....|+.+|.+.|.+.+.++ +   .|+++++++||.+.++...... .+.... ..    .
T Consensus       154 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~-~~~~~~-~~----~  210 (257)
T PRK12744        154 -----------------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQE-GAEAVA-YH----K  210 (257)
T ss_pred             -----------------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccc-ccchhh-cc----c
Confidence                             013679999999999999987 4   3799999999999776432210 000000 00    0


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g-~~n~~~~  272 (341)
                      .... ....      ....+.+++|++.++..++.... ..| ++++.++
T Consensus       211 ~~~~-~~~~------~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg  253 (257)
T PRK12744        211 TAAA-LSPF------SKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGG  253 (257)
T ss_pred             cccc-cccc------ccCCCCCHHHHHHHHHHhhcccceeecceEeecCC
Confidence            0000 0000      02358889999999999998532 235 6676654

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.80  E-value=5.3e-18  Score=149.43  Aligned_cols=222  Identities=18%  Similarity=0.184  Sum_probs=149.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +++++||||+|.||+++++.|++.|++|++++| +.......  ...+.....++.++++|+.+++.+.++++       
T Consensus        10 ~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277         10 GKVAVITGGGGVLGGAMAKELARAGAKVAILDR-NQEKAEAV--VAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999 65432211  11111223468899999999987777654       


Q ss_pred             CCCEEEEeccCCccc--------------------cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccc
Q 019415           79 GCDFVFHVATPLQHI--------------------DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCA  134 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~--------------------~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~  134 (341)
                      ++|++||+|+.....                    ..+.++..+++|+.++..+++++    .+.+ ..++|++||...+
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~  165 (278)
T PRK08277         87 PCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAF  165 (278)
T ss_pred             CCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhc
Confidence            689999999954321                    13446688999999988665554    4444 5789999998754


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCC
Q 019415          135 SPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSS  210 (341)
Q Consensus       135 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~  210 (341)
                      .+..                            ....|+.+|...+.+++.++ +   .|+++..++||.+..+.......
T Consensus       166 ~~~~----------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~  217 (278)
T PRK08277        166 TPLT----------------------------KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLF  217 (278)
T ss_pred             CCCC----------------------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhc
Confidence            3221                            14679999999999998887 3   38999999999998874321100


Q ss_pred             CC-chhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC-CC--CCc-eEEEecc
Q 019415          211 TP-VSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK-PS--MSG-RFFCTNV  272 (341)
Q Consensus       211 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~--~~g-~~n~~~~  272 (341)
                      .. .........+....      .       ...+...+|+|+++..++.. ..  ..| .+.+.++
T Consensus       218 ~~~~~~~~~~~~~~~~~------p-------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        218 NEDGSLTERANKILAHT------P-------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             cccccchhHHHHHhccC------C-------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            00 00000111111110      0       23366789999999998875 22  355 4455444

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.80  E-value=8.4e-18  Score=145.96  Aligned_cols=195  Identities=16%  Similarity=0.152  Sum_probs=138.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCc-hhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLED-KSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      +.++||||||+|.||++++++|+++| ++|++++| +.+. ... .+.+...  ...+++++.+|++|++++.++++   
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r-~~~~~~~~~~~~l~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAAL-PDDPRRDAAVAQMKAA--GASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeC-CcchhHHHHHHHHHhc--CCCceEEEEecCCChHHHHHHHHHHH
Confidence            46799999999999999999999995 99999999 7653 221 1222221  12368999999999887655543   


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHH----HHHHHHhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKK----IASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~----l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||++|......     .....+.+++|+.++..    +++.+.+.+ ..++|++||.....+.         
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~---------  153 (253)
T PRK07904         84 AGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVR---------  153 (253)
T ss_pred             hcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC---------
Confidence               6999999998764321     11122468999988876    566677776 7899999997632211         


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         .....|+.||.....+.+.+.    .+++++++++||.+..+.....              
T Consensus       154 -------------------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~--------------  200 (253)
T PRK07904        154 -------------------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA--------------  200 (253)
T ss_pred             -------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC--------------
Confidence                               113569999999887766654    3589999999999976521110              


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                       ..               ....+..+|+|+.++.++.++
T Consensus       201 -~~---------------~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        201 -KE---------------APLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             -CC---------------CCCCCCHHHHHHHHHHHHHcC
Confidence             00               111357899999999999864

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.80  E-value=8.3e-18  Score=145.88  Aligned_cols=217  Identities=14%  Similarity=0.121  Sum_probs=149.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||+++++.|++.|++|+++.| +... .....+..   ...++.++.+|+++++++.++++      
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~-~~~~-~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGV-AEAP-ETQAQVEA---LGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecC-chHH-HHHHHHHH---cCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999888 5422 11222222   23468899999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++..+.+++..    .+.-.++|++||...+.+...         
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---------  152 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR---------  152 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC---------
Confidence             5899999999754321     455678899999999888877643    221368999999875442211         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.||...+.+.+.++ +   +|+++..++||.+-.+.....   .. .......+..
T Consensus       153 -------------------~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~---~~-~~~~~~~~~~  209 (251)
T PRK12481        153 -------------------VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL---RA-DTARNEAILE  209 (251)
T ss_pred             -------------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc---cc-ChHHHHHHHh
Confidence                               3579999999999998876 3   489999999999865522111   00 0001111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTN  271 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~  271 (341)
                      .   .+          ...+...+|+++++..++...  ...| ++.+.+
T Consensus       210 ~---~p----------~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdg  246 (251)
T PRK12481        210 R---IP----------ASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDG  246 (251)
T ss_pred             c---CC----------CCCCcCHHHHHHHHHHHhCccccCcCCceEEECC
Confidence            1   00          223567899999999998642  2345 444433

>PRK07069 short chain dehydrogenase; Validated

Probab=99.80  E-value=8.8e-18  Score=145.70  Aligned_cols=207  Identities=15%  Similarity=0.112  Sum_probs=141.2

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhh-hCCCC--CCceEEEecCCCChHHHHHHhc------
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLK-SLPGA--ETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~--~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +|+||||+|+||.++++.|+++|++|++++| +...  ..+.+. .+...  ...+.++++|+++++.+.++++      
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r-~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDI-NDAA--GLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM   77 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeC-Ccch--HHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999999999999 6321  122111 11111  1235568899999988876664      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhh----HHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVG----AAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~----~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+|+......     .+.++..+++|+.    .+.+++.++++.+ .++||++||...+.+...         
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~---------  147 (251)
T PRK07069         78 GGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPD---------  147 (251)
T ss_pred             CCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCC---------
Confidence             5799999999765432     3345677888988    7778888888776 789999999875543211         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---C--CceEEEEecCceeCCCCCCCCCCCch-hhhhHhh
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---S--GLEVVALALGVVAGDTNLPYSSTPVS-VIGGLCQ  221 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~--~~~~~vlRp~~v~G~~~~~~~~~~~~-~~~~~~~  221 (341)
                                         ...|+.+|...+.+.+.++ +   .  +++++.++|+.+.++.....  .... .......
T Consensus       148 -------------------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~  206 (251)
T PRK07069        148 -------------------YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPI--FQRLGEEEATRK  206 (251)
T ss_pred             -------------------CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHH--hhhccchhHHHH
Confidence                               3579999999999988775 2   2  48999999999988753221  0000 0001111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      +.+..       .      ...+.+++|++.++..++..+
T Consensus       207 ~~~~~-------~------~~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        207 LARGV-------P------LGRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             HhccC-------C------CCCCcCHHHHHHHHHHHcCcc
Confidence            11110       0      233567999999999987653

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.6e-17  Score=149.20  Aligned_cols=205  Identities=13%  Similarity=0.048  Sum_probs=145.0

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .++++||||||+|.||+++++.|+++|++|++++| +........  ..+......+.++.+|++|++.+.++++     
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R-~~~~l~~~~--~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAAR-DEEALQAVA--EECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            35679999999999999999999999999999999 764322221  1111223468889999999988887763     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++..++    ++.+ ..++|++||...+.+..         
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p---------  151 (330)
T PRK06139         82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQP---------  151 (330)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCC---------
Confidence              5899999999654322     3445678999999999887775    3444 47899999976443211         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----c-CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----S-SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~-~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         ....|+.||.....+.+.+.    + .+++++.+.|+.+..+.....      .. .    
T Consensus       152 -------------------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~------~~-~----  201 (330)
T PRK06139        152 -------------------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHG------AN-Y----  201 (330)
T ss_pred             -------------------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccc------cc-c----
Confidence                               14689999997666666554    3 389999999999987743221      00 0    


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                      ...  ....         ...++..+|+|++++.+++++.
T Consensus       202 ~~~--~~~~---------~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        202 TGR--RLTP---------PPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             ccc--cccC---------CCCCCCHHHHHHHHHHHHhCCC
Confidence            000  0000         3346789999999999998654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.79  E-value=3e-17  Score=143.58  Aligned_cols=222  Identities=13%  Similarity=0.099  Sum_probs=151.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++++|||||+|.||.+++++|++.|++|+++.| +.......  ...+.....++.++++|+++++.++++++       
T Consensus        10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097         10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDI-NQELVDKG--LAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHH--HHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999988 65432211  11111122368899999999988887775       


Q ss_pred             CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|++||+||.....     ..+.++..+++|+.++..+++++..    .+ ..+||++||....++..           
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----------  154 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRE-----------  154 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCC-----------
Confidence            489999999976532     1445678889999998877777643    44 57999999976444221           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCC-CCc-hhhhhHhhHh
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSS-TPV-SVIGGLCQLT  223 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~-~~~-~~~~~~~~~~  223 (341)
                                       ....|+.+|...+.+++.++ +   .|+++..++||.+..+....... ... ....+...+.
T Consensus       155 -----------------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (265)
T PRK07097        155 -----------------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFII  217 (265)
T ss_pred             -----------------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHH
Confidence                             14689999999999999987 3   38999999999998874322100 000 0000111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...+             ...+...+|++.++..++...  ...| .+.+.++
T Consensus       218 ~~~~-------------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg  256 (265)
T PRK07097        218 AKTP-------------AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGG  256 (265)
T ss_pred             hcCC-------------ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence            0000             223667899999999998753  2345 4455444

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.79  E-value=5.4e-18  Score=151.46  Aligned_cols=182  Identities=14%  Similarity=0.074  Sum_probs=125.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||++++++|+++|++|++++| +...... .+.+... .....++++.+|+.+.+++.++++     
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVR-NLDKGKAAAARITAA-TPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh-CCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            4579999999999999999999999999999999 7544221 1222211 112368899999999988877664     


Q ss_pred             --CCCEEEEeccCCcccc---chhHhHhhhhhhhH----HHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID---GYLYKNVVEACVGA----AKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~---~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ++|+|||+||......   .+.++..+++|+.+    +..+++.+++.+ ..++|++||........        ...
T Consensus        93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~--------~~~  163 (306)
T PRK06197         93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAA--------IHF  163 (306)
T ss_pred             CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCC--------CCc
Confidence              5899999999754322   33456788999999    556666666665 57999999986432111        111


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEE--EecCceeCCC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVA--LALGVVAGDT  204 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~v--lRp~~v~G~~  204 (341)
                      ++..+..       ...+...|+.||.+.+.+.+.++ +   .++++.+  +.||.|..+.
T Consensus       164 ~~~~~~~-------~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        164 DDLQWER-------RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             cccCccc-------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            1111000       01246789999999999998876 3   3555554  4799886653

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.7e-17  Score=147.06  Aligned_cols=197  Identities=16%  Similarity=0.120  Sum_probs=141.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +++|+||||+|.||.++++.|++.|++|++++| +........  ..+......+.++.+|++|++++.++++       
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R-~~~~l~~~~--~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  116 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVAR-REDLLDAVA--DRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG  116 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999 754322211  1111112367899999999998888776       


Q ss_pred             CCCEEEEeccCCcccc-------chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-------GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-------~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                      ++|+|||+||......       ...++..+++|+.++.++++++.    +.+ ..++|++||.+++.+..         
T Consensus       117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  186 (293)
T PRK05866        117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEAS---------  186 (293)
T ss_pred             CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCC---------
Confidence            6899999999754322       13345788999999888877653    555 68999999976322100         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                        .....|+.+|...+.+++.++ +   .|+++++++||.+-.+.....              .
T Consensus       187 ------------------p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~--------------~  234 (293)
T PRK05866        187 ------------------PLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT--------------K  234 (293)
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc--------------c
Confidence                              113689999999998888875 3   489999999998755421110              0


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      ..       .       ....+..+++|+.++.++++.
T Consensus       235 ~~-------~-------~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        235 AY-------D-------GLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             cc-------c-------CCCCCCHHHHHHHHHHHHhcC
Confidence            00       0       122457899999999999853

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.4e-17  Score=146.49  Aligned_cols=209  Identities=15%  Similarity=0.106  Sum_probs=146.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|.||.++++.|++.|++|++++| +...   ++.+ ..+. ....+..+.+|++|++++.++++     
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~---l~~~~~~l~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDL-EEAE---LAALAAELG-GDDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHHhc-CCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999 6543   2222 1221 12356677899999988777654     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ++|+|||+||......     .+.++..+++|+.++.++++++...-  ...++|++||...+.+..           
T Consensus        83 ~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  151 (296)
T PRK05872         83 FGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP-----------  151 (296)
T ss_pred             cCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC-----------
Confidence              5899999999754321     44567889999999999998875421  136899999987544221           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       ....|+.+|...+.+.+.++ +   .|+++.++.|+.+..+.....  ... .. ....+...
T Consensus       152 -----------------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~--~~~-~~-~~~~~~~~  210 (296)
T PRK05872        152 -----------------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA--DAD-LP-AFRELRAR  210 (296)
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc--ccc-ch-hHHHHHhh
Confidence                             14689999999999998876 3   489999999999876633221  000 01 11111111


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      ..  ..         ...++..+|+++++..++.+.
T Consensus       211 ~~--~p---------~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        211 LP--WP---------LRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             CC--Cc---------ccCCCCHHHHHHHHHHHHhcC
Confidence            00  00         234677999999999999753

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.79  E-value=2.2e-17  Score=142.34  Aligned_cols=216  Identities=16%  Similarity=0.138  Sum_probs=145.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      +.+|||||+|+||+++++.|++.|++|+++.| .... ...+...........+.++.+|+++++.+.++++       .
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r-~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG-PNEE-RAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CCHH-HHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999888 3221 1111111111112468899999999988776654       4


Q ss_pred             CCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +|+|||+|+.....     ..+.++..++.|+.++..+++.    +++.+ .+++|++||.....+..            
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~------------  145 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQF------------  145 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCC------------
Confidence            89999999865432     1344567789999997775544    45555 68999999975433211            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                      ....|+.+|...+.+++.++    ..++++++++|+.+.++.....      .+.+...+....
T Consensus       146 ----------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~------~~~~~~~~~~~~  203 (242)
T TIGR01829       146 ----------------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAM------REDVLNSIVAQI  203 (242)
T ss_pred             ----------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc------chHHHHHHHhcC
Confidence                            13579999998888887775    2489999999999987753321      111222222111


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      +             ...+...+|+++++.+++..+.  ..| .+.+.++
T Consensus       204 ~-------------~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg  239 (242)
T TIGR01829       204 P-------------VGRLGRPEEIAAAVAFLASEEAGYITGATLSINGG  239 (242)
T ss_pred             C-------------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            0             2234557899999988776532  234 5666654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.79  E-value=2.6e-17  Score=160.88  Aligned_cols=232  Identities=16%  Similarity=0.077  Sum_probs=150.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +....... ..+... .....+..+.+|+++++++.++++     
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r-~~~~~~~~~~~l~~~-~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADL-NLEAAEAVAAEINGQ-FGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHHHHhh-cCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999 75432221 111110 011357789999999998888776     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+||......     .+.++..+++|+.+...+...+    ++.+.-.++|++||..++++...        
T Consensus       491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~--------  562 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN--------  562 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC--------
Confidence              6899999999754322     3345677889998877765444    33331258999999876553221        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCcee-CCCCCCCCCCCchhhhhHhhH
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVA-GDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~-G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ...|+.+|...+.+++.++ +   .|+++..++|+.|+ |.+....    .+....  ..
T Consensus       563 --------------------~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~----~~~~~~--~~  616 (676)
T TIGR02632       563 --------------------ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDG----EWREER--AA  616 (676)
T ss_pred             --------------------CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccc----cchhhh--hh
Confidence                                4789999999999999886 3   38999999999887 3221100    000000  00


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .....................+++.+|+|+++..++...  ...| ++++.++
T Consensus       617 ~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG  669 (676)
T TIGR02632       617 AYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGG  669 (676)
T ss_pred             cccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence            000000000000000011455789999999999987643  3345 6677655

>TIGR02415 23BDH acetoin reductases

Probab=99.79  E-value=9.7e-18  Score=145.71  Aligned_cols=225  Identities=17%  Similarity=0.138  Sum_probs=147.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      ++++||||+|.||.++++.|++.|++|+++.| +.......  ...+......+.++.+|+++++.+.++++       .
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADL-NEETAKET--AKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999998 64322211  11111223468899999999998877754       4


Q ss_pred             CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +|+|||+|+......     ...++..+++|+.++..+++++..    .+...++|++||....++...           
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----------  146 (254)
T TIGR02415        78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI-----------  146 (254)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC-----------
Confidence            799999998754321     344568899999998877666543    332368999999875553221           


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                       ...|+.+|...+.+++.++ +   .++++.+++|+.+..+.....      .....+ .. . 
T Consensus       147 -----------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~------~~~~~~-~~-~-  200 (254)
T TIGR02415       147 -----------------LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEI------DEETSE-IA-G-  200 (254)
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhh------hhhhhh-cc-c-
Confidence                             4689999999999998776 3   389999999998855532110      000000 00 0 


Q ss_pred             ccccc-ccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceEEEec
Q 019415          227 YVYQT-LRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRFFCTN  271 (341)
Q Consensus       227 ~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~n~~~  271 (341)
                      ...+. ............+..++|+++++..++....  ..|.+...+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d  248 (254)
T TIGR02415       201 KPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVD  248 (254)
T ss_pred             CchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEec
Confidence            00000 0000000002347889999999999998653  346554433

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.79  E-value=3e-17  Score=141.32  Aligned_cols=201  Identities=17%  Similarity=0.133  Sum_probs=140.2

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCC--hHHHHHHh
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYD--PDTFENAI   77 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~   77 (341)
                      |...++++|+||||+|+||+++++.|+++|++|++++| +....... +.+...  ......++.+|+.+  .+.+.+++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~   77 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVAR-HQKKLEKVYDAIVEA--GHPEPFAIRFDLMSAEEKEFEQFA   77 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeC-ChHHHHHHHHHHHHc--CCCCcceEEeeecccchHHHHHHH
Confidence            66666789999999999999999999999999999999 76432221 111111  12356788899875  33344332


Q ss_pred             --------cCCCEEEEeccCCccc---c---chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCC
Q 019415           78 --------QGCDFVFHVATPLQHI---D---GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKE  139 (341)
Q Consensus        78 --------~~~d~Vi~~a~~~~~~---~---~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~  139 (341)
                              .++|+|||+|+.....   .   .+.+...+++|+.++.++++++..    .+ ..++|++||.....+.  
T Consensus        78 ~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~--  154 (239)
T PRK08703         78 ATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPK--  154 (239)
T ss_pred             HHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCC--
Confidence                    4579999999964321   1   344556889999998888887744    33 5799999996532211  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC----CceEEEEecCceeCCCCCCCCCCCch
Q 019415          140 DGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS----GLEVVALALGVVAGDTNLPYSSTPVS  214 (341)
Q Consensus       140 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~----~~~~~vlRp~~v~G~~~~~~~~~~~~  214 (341)
                                                .....|+.+|+..+.+++.++ +.    ++++.+++||.|.++.....  .+  
T Consensus       155 --------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~--~~--  204 (239)
T PRK08703        155 --------------------------AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS--HP--  204 (239)
T ss_pred             --------------------------CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc--CC--
Confidence                                      113579999999999998887 32    59999999999988743221  00  


Q ss_pred             hhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          215 VIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                               +.        .      ...+...+|++.++..++..
T Consensus       205 ---------~~--------~------~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        205 ---------GE--------A------KSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             ---------CC--------C------ccccCCHHHHHHHHHHHhCc
Confidence                     00        0      12245789999999998873

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.79  E-value=2.1e-17  Score=144.37  Aligned_cols=200  Identities=17%  Similarity=0.122  Sum_probs=142.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||.++++.|+++|++|++++| +........  ..+ .....++++.+|+.|++.+.++++      
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGR-NAEKLEALA--ARL-PYPGRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHH-hcCCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            3578999999999999999999999999999999 754322221  111 123478899999999988776654      


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||.....+...          
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~----------  148 (263)
T PRK09072         80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGYPG----------  148 (263)
T ss_pred             CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCCCC----------
Confidence            5799999999754321     344567889999999999888754    23 468999999764443211          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                        ...|+.+|...+.+++.++ +   .+++++.+.||.+..+.....          .......
T Consensus       149 ------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~----------~~~~~~~  200 (263)
T PRK09072        149 ------------------YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEA----------VQALNRA  200 (263)
T ss_pred             ------------------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhh----------ccccccc
Confidence                              3579999999888887776 3   489999999998855421110          0000000


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                              .      ...+..++|+|+++..++++.
T Consensus       201 --------~------~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        201 --------L------GNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             --------c------cCCCCCHHHHHHHHHHHHhCC
Confidence                    0      123567899999999999865

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.78  E-value=2.1e-17  Score=142.23  Aligned_cols=202  Identities=12%  Similarity=0.073  Sum_probs=141.9

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------CCC
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------GCD   81 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   81 (341)
                      ||||||+|+||.++++.|+++|++|+++.| +... ........+.....++.++.+|+++++.+.++++       ..|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYH-SGRS-DAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CCHH-HHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999887 4322 1111122222223478999999999988777654       479


Q ss_pred             EEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH-----hcCCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV-----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        82 ~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      ++||+|+.....     ..+.++..++.|+.++.++++++.     +.+ ..++|++||...+++...            
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~------------  145 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRG------------  145 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCCC------------
Confidence            999999865432     144567889999999999988752     233 478999999876664322            


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                                      ...|+.+|...+.+.+.++ +   .|++++.++|+.+.++.....      .... ......  
T Consensus       146 ----------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~-~~~~~~--  200 (239)
T TIGR01831       146 ----------------QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV------EHDL-DEALKT--  200 (239)
T ss_pred             ----------------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh------hHHH-HHHHhc--
Confidence                            3579999999988888776 3   489999999999976643211      1111 111111  


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                       .+          ...+...+|+++++.+++...
T Consensus       201 -~~----------~~~~~~~~~va~~~~~l~~~~  223 (239)
T TIGR01831       201 -VP----------MNRMGQPAEVASLAGFLMSDG  223 (239)
T ss_pred             -CC----------CCCCCCHHHHHHHHHHHcCch
Confidence             00          223556899999999998753

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.78  E-value=1.9e-17  Score=144.69  Aligned_cols=170  Identities=18%  Similarity=0.127  Sum_probs=127.2

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|.||+++++.|+++|++|++++| +...   .+.+...  ....+.++++|+++++++.++++  
T Consensus         1 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   74 (263)
T PRK06200          1 MGWLHGQVALITGGGSGIGRALVERFLAEGARVAVLER-SAEK---LASLRQR--FGDHVLVVEGDVTSYADNQRAVDQT   74 (263)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHH--hCCcceEEEccCCCHHHHHHHHHHH
Confidence            44445689999999999999999999999999999999 6543   2222221  12367889999999988777664  


Q ss_pred             -----CCCEEEEeccCCccc----c--ch----hHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI----D--GY----LYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~----~--~~----~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                           ++|++||+|+.....    .  .+    .++..+++|+.++..+++++...-  +-.++|++||...+.+..   
T Consensus        75 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---  151 (263)
T PRK06200         75 VDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG---  151 (263)
T ss_pred             HHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC---
Confidence                 589999999975321    1  11    155678999999999888876431  125899999987544321   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCC
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDT  204 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~  204 (341)
                                               ....|+.+|...+.+++.++ +.  ++++..+.||.+..+.
T Consensus       152 -------------------------~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~  192 (263)
T PRK06200        152 -------------------------GGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDL  192 (263)
T ss_pred             -------------------------CCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCC
Confidence                                     13579999999999999887 43  6999999999996653

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.78  E-value=8.2e-17  Score=139.76  Aligned_cols=220  Identities=13%  Similarity=0.078  Sum_probs=147.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +|++|||||+|.||+++++.|+++|++|++++| +.........  .+......+.++++|+++++.+.++++       
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r-~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGR-TKEKLEEAKL--EIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--HHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            368999999999999999999999999999999 7543222211  111112478899999999988877664       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+||......     .+.++..+++|+.++.++++++...    +...++|++||.....+.            
T Consensus        78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------  145 (252)
T PRK07677         78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG------------  145 (252)
T ss_pred             CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC------------
Confidence            5799999998533211     3445688999999999999988432    213689999997532211            


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                      .....|+.+|...+.+.+.++ +    +|+++..++||.+........  ... .....+.+..
T Consensus       146 ----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~--~~~-~~~~~~~~~~  206 (252)
T PRK07677        146 ----------------PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADK--LWE-SEEAAKRTIQ  206 (252)
T ss_pred             ----------------CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeeccccccccccc--ccC-CHHHHHHHhc
Confidence                            113579999999999888765 2    489999999999975321111  000 1111122211


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...             ...+...+|+++++..++...  ...| .+.+.++
T Consensus       207 ~~~-------------~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  244 (252)
T PRK07677        207 SVP-------------LGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGG  244 (252)
T ss_pred             cCC-------------CCCCCCHHHHHHHHHHHcCccccccCCCEEEECCC
Confidence            110             223667899999998887643  2345 4455443

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.78  E-value=3.8e-17  Score=141.97  Aligned_cols=207  Identities=14%  Similarity=0.115  Sum_probs=145.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||+++++.|++.|++|++++| +... ...+.+...   ...+.++++|+++.+++.++++      
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~-~~~~-~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINI-VEPT-ETIEQVTAL---GRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecC-cchH-HHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999998877 4321 222333322   2468889999999988887775      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.+++.+++|+.++.++++++...    +.-.++|++||..+..+...         
T Consensus        84 ~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------  154 (253)
T PRK08993         84 GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR---------  154 (253)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC---------
Confidence             5899999999754321     3556789999999999998887542    21258999999875442211         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.+|.+.+.+.+.++ +   .|+++..++||.+-.+.....  .+.  ......+..
T Consensus       155 -------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~--~~~--~~~~~~~~~  211 (253)
T PRK08993        155 -------------------VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL--RAD--EQRSAEILD  211 (253)
T ss_pred             -------------------CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh--ccc--hHHHHHHHh
Confidence                               3579999999999998886 3   489999999999966532111  000  001111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      .   .+          ..-+...+|++.++..++...
T Consensus       212 ~---~p----------~~r~~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        212 R---IP----------AGRWGLPSDLMGPVVFLASSA  235 (253)
T ss_pred             c---CC----------CCCCcCHHHHHHHHHHHhCcc
Confidence            0   00          122667899999999998753

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.78  E-value=7.9e-17  Score=138.47  Aligned_cols=210  Identities=13%  Similarity=0.060  Sum_probs=144.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++++|||||+|.||+++++.|+++|++|++++| +...  ..+.+..     .+++++.+|+.+++++.++++       
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~--~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   73 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYR-THYP--AIDGLRQ-----AGAQCIQADFSTNAGIMAFIDELKQHTD   73 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeC-Cchh--HHHHHHH-----cCCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence            368999999999999999999999999999999 6543  1222222     146789999999987776654       


Q ss_pred             CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc---CC--cCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS---GT--VKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~--~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      ++|++||+|+.....     ..+.++..+++|+.++..+.+++...   ..  ..++|++||.....+..          
T Consensus        74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~----------  143 (236)
T PRK06483         74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSD----------  143 (236)
T ss_pred             CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCC----------
Confidence            489999999964332     14556788999999998776666442   11  25899999875322111          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                        ....|+.+|...|.+++.++ +.  ++++..++||.+.-+... .       ..........
T Consensus       144 ------------------~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-~-------~~~~~~~~~~  197 (236)
T PRK06483        144 ------------------KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-D-------AAYRQKALAK  197 (236)
T ss_pred             ------------------CCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-C-------HHHHHHHhcc
Confidence                              14679999999999999987 43  699999999987432111 0       1111111111


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      .+             ..-+...+|+++++..++......| ++.+.++
T Consensus       198 ~~-------------~~~~~~~~~va~~~~~l~~~~~~~G~~i~vdgg  232 (236)
T PRK06483        198 SL-------------LKIEPGEEEIIDLVDYLLTSCYVTGRSLPVDGG  232 (236)
T ss_pred             Cc-------------cccCCCHHHHHHHHHHHhcCCCcCCcEEEeCcc
Confidence            00             1114468999999999997555566 4555443

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.78  E-value=4.6e-17  Score=142.10  Aligned_cols=219  Identities=15%  Similarity=0.117  Sum_probs=145.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||.++++.|++.|++|+++.| +... ........+......+.++.+|+++.+++.++++      
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~-~~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYR-SDEE-EANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CCHH-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999988888 5432 1111111111123468889999999988777664      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHH----HHHhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIAS----FCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+|+......     .+.++..+++|+.++..++.    .+.+.+.-.++|++||.....+.           
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~-----------  152 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW-----------  152 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC-----------
Confidence             5899999999754322     34456788999888766544    44554423689999997533221           


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .....|+.+|.+.+.+.+.++    ..|+++.+++||.+..+.....  .+.  +........
T Consensus       153 -----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~--~~~--~~~~~~~~~  211 (261)
T PRK08936        153 -----------------PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEK--FAD--PKQRADVES  211 (261)
T ss_pred             -----------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccc--cCC--HHHHHHHHh
Confidence                             124689999988887777765    3489999999999987743221  111  111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCce-EEEe
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGR-FFCT  270 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~-~n~~  270 (341)
                      ..    +         ...+...+|+++++.+++....  ..|. +.+.
T Consensus       212 ~~----~---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  247 (261)
T PRK08936        212 MI----P---------MGYIGKPEEIAAVAAWLASSEASYVTGITLFAD  247 (261)
T ss_pred             cC----C---------CCCCcCHHHHHHHHHHHcCcccCCccCcEEEEC
Confidence            10    0         2236668999999999887532  4563 3443

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5.6e-17  Score=142.48  Aligned_cols=217  Identities=14%  Similarity=0.168  Sum_probs=146.7

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh----hhHh-hhCCCCCCceEEEecCCCChHHHHH
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK----VDLL-KSLPGAETRLIFFEAEIYDPDTFEN   75 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~   75 (341)
                      |...+++++|||||+|+||+++++.|+++|++|++++| +......    ++.. ..+......+.++.+|+++++.+.+
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAK-TAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec-ccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHH
Confidence            34345679999999999999999999999999999999 6543111    1111 1111223468899999999998887


Q ss_pred             Hhc-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEecccccccCCCCC
Q 019415           76 AIQ-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        76 ~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~  140 (341)
                      +++       ++|+|||+||......     .+.++..+++|+.++.++++++...   ..-.++|++||.....+.   
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---  156 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK---  156 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc---
Confidence            765       6899999999754322     3345678999999999999998643   113588999886421110   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                             +.                .+...|+.+|.+.|.+++.++ +   .++++..+.|+.+....            
T Consensus       157 -------~~----------------~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~------------  201 (273)
T PRK08278        157 -------WF----------------APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA------------  201 (273)
T ss_pred             -------cc----------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH------------
Confidence                   00                124689999999999999887 4   38999999998432210            


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceEEE
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRFFC  269 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~n~  269 (341)
                       ..+.......      .      ...+...+|++++++.++....  ..|.+.+
T Consensus       202 -~~~~~~~~~~------~------~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~  243 (273)
T PRK08278        202 -AVRNLLGGDE------A------MRRSRTPEIMADAAYEILSRPAREFTGNFLI  243 (273)
T ss_pred             -HHHhcccccc------c------ccccCCHHHHHHHHHHHhcCccccceeEEEe
Confidence             0000101110      0      2235678999999999987543  3454444

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=4.4e-17  Score=140.15  Aligned_cols=202  Identities=13%  Similarity=0.085  Sum_probs=141.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +........  ..... ...++++++|+++++.+.++++      
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSR-NENKLKRMK--KTLSK-YGNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHHh-cCCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999999 654322221  11111 1368899999999988876654      


Q ss_pred             -CCCEEEEeccCCcccc---chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID---GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                       ++|.+||+++......   .+..+..++.|+.+...+++.+...- .-.++|++||....++..               
T Consensus        80 ~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~---------------  144 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS---------------  144 (238)
T ss_pred             CCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC---------------
Confidence             4699999998644322   33345778999999888888776541 125799999976432110               


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccc
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVY  229 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (341)
                                  .+...|+.+|...+.+++.+. +   .+++++++||+.++++.....         .+......    
T Consensus       145 ------------~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~---------~~~~~~~~----  199 (238)
T PRK05786        145 ------------PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER---------NWKKLRKL----  199 (238)
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh---------hhhhhccc----
Confidence                        124679999999988887776 3   389999999999998742111         00000000    


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                                 ...++..+|+++++.+++..+
T Consensus       200 -----------~~~~~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        200 -----------GDDMAPPEDFAKVIIWLLTDE  220 (238)
T ss_pred             -----------cCCCCCHHHHHHHHHHHhccc
Confidence                       123567899999999998753

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.77  E-value=3.6e-17  Score=142.72  Aligned_cols=219  Identities=15%  Similarity=0.122  Sum_probs=142.5

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCC-CCCCceEEEecCCCChHHHHHHhc---
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLP-GAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      .++++||||||++.||+++++.|++.|++|+++.| +..  +..+.+ ..+. .....+.++++|++|+++++++++   
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYN-SNV--EEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC-CCH--HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999988766 332  122111 1111 112468899999999988877765   


Q ss_pred             ----CCCEEEEeccCCcc------c-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCC
Q 019415           79 ----GCDFVFHVATPLQH------I-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKE  139 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~------~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~  139 (341)
                          ++|++||+|+....      .     ..+.+...+++|+.+...+.+.+    ++.+ ..++|++||.....+.. 
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-  160 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYIE-  160 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCCC-
Confidence                47999999985421      1     12344577888888777665554    3333 46999999975322111 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchh
Q 019415          140 DGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSV  215 (341)
Q Consensus       140 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~  215 (341)
                                                 ....|+.+|...+.+++.++ +   +|+++..+.||.+-.+.....   +. .
T Consensus       161 ---------------------------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~---~~-~  209 (260)
T PRK08416        161 ---------------------------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF---TN-Y  209 (260)
T ss_pred             ---------------------------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc---cC-C
Confidence                                       13579999999999999887 4   389999999998854421110   00 0


Q ss_pred             hhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          216 IGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ...........    +         ...+...+|++.++.+++....  ..| .+.+.+
T Consensus       210 ~~~~~~~~~~~----~---------~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdg  255 (260)
T PRK08416        210 EEVKAKTEELS----P---------LNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDG  255 (260)
T ss_pred             HHHHHHHHhcC----C---------CCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcC
Confidence            11111111100    0         2236679999999999886432  355 444433

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.77  E-value=6e-17  Score=126.77  Aligned_cols=201  Identities=16%  Similarity=0.149  Sum_probs=146.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |||.|+||||.+|++|++.+.++||+|++++| +.++         ++.. +++.+.+.|+.|+..+.+.+.+.|+||..
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivR-n~~K---------~~~~-~~~~i~q~Difd~~~~a~~l~g~DaVIsA   69 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVR-NASK---------LAAR-QGVTILQKDIFDLTSLASDLAGHDAVISA   69 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEe-ChHh---------cccc-ccceeecccccChhhhHhhhcCCceEEEe
Confidence            78999999999999999999999999999999 8765         1111 47789999999999999999999999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNE  166 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  166 (341)
                      -+........   .+    ......|++..+..+ ++|++.++.+++.+-...      ...++-.            ..
T Consensus        70 ~~~~~~~~~~---~~----~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g------~rLvD~p------------~f  123 (211)
T COG2910          70 FGAGASDNDE---LH----SKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEG------TRLVDTP------------DF  123 (211)
T ss_pred             ccCCCCChhH---HH----HHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCC------ceeecCC------------CC
Confidence            8776433211   11    334677888888888 999999999987663322      1111111            23


Q ss_pred             hhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          167 YLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       167 ~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                      |..-|..++..+| .+..+. +.+++|+.+.|+..|-|+.+..    . .      ..++.....+..       .-++|
T Consensus       124 P~ey~~~A~~~ae-~L~~Lr~~~~l~WTfvSPaa~f~PGerTg----~-y------rlggD~ll~n~~-------G~SrI  184 (211)
T COG2910         124 PAEYKPEALAQAE-FLDSLRAEKSLDWTFVSPAAFFEPGERTG----N-Y------RLGGDQLLVNAK-------GESRI  184 (211)
T ss_pred             chhHHHHHHHHHH-HHHHHhhccCcceEEeCcHHhcCCccccC----c-e------EeccceEEEcCC-------Cceee
Confidence            4556778888877 344444 4469999999999999976654    1 0      112222222222       56799


Q ss_pred             cHHHHHHHHHHhhcCCCC
Q 019415          246 HIDDVCEAHIFCMEKPSM  263 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~~~  263 (341)
                      ...|.|-+++..++++.-
T Consensus       185 S~aDYAiA~lDe~E~~~h  202 (211)
T COG2910         185 SYADYAIAVLDELEKPQH  202 (211)
T ss_pred             eHHHHHHHHHHHHhcccc
Confidence            999999999999998754

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.1e-17  Score=142.32  Aligned_cols=212  Identities=19%  Similarity=0.149  Sum_probs=139.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC------   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------   80 (341)
                      |+||||||+|+||+++++.|+++|++|++++| +..+  ....+..  ....+++++.+|+++++.+.++++.+      
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r-~~~~--~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISR-TENK--ELTKLAE--QYNSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeC-CchH--HHHHHHh--ccCCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            58999999999999999999999999999999 6532  1222211  12347889999999998888777531      


Q ss_pred             -----CEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCC
Q 019415           81 -----DFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        81 -----d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                           .++||+||.....      ..+.+...+++|+.+...+++++    ++.+..++||++||..+..+.        
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  148 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY--------  148 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC--------
Confidence                 2789999864321      14445677889999866666554    333214689999997642211        


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCC-CCCCchhhhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPY-SSTPVSVIGG  218 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~-~~~~~~~~~~  218 (341)
                                          .+...|+.+|...+.+++.++ +     .++++..++||.+-.+..... ......... 
T Consensus       149 --------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-  207 (251)
T PRK06924        149 --------------------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTN-  207 (251)
T ss_pred             --------------------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchH-
Confidence                                125789999999999998886 3     379999999998855421100 000000000 


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC-CCCCc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK-PSMSG  265 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~g  265 (341)
                      ......   ...          ...+..++|+|+++..++.. ....|
T Consensus       208 ~~~~~~---~~~----------~~~~~~~~dva~~~~~l~~~~~~~~G  242 (251)
T PRK06924        208 LDRFIT---LKE----------EGKLLSPEYVAKALRNLLETEDFPNG  242 (251)
T ss_pred             HHHHHH---Hhh----------cCCcCCHHHHHHHHHHHHhcccCCCC
Confidence            000000   000          12367899999999999976 33455

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.77  E-value=8.6e-17  Score=142.16  Aligned_cols=222  Identities=16%  Similarity=0.096  Sum_probs=148.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC------chhhhhH-hhhCCCCCCceEEEecCCCChHHH
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE------DKSKVDL-LKSLPGAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~   73 (341)
                      |...+++++|||||++.||.++++.|++.|++|++++| +.+      .....+. ...+......+.++.+|+++++++
T Consensus         1 m~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   79 (286)
T PRK07791          1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI-GVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGA   79 (286)
T ss_pred             CCccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeC-CccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHH
Confidence            65556789999999999999999999999999999887 541      1111111 112222234678899999998877


Q ss_pred             HHHhc-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cC-----CcCEEEEecccc
Q 019415           74 ENAIQ-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SG-----TVKRLIYTASVL  132 (341)
Q Consensus        74 ~~~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~-----~~~~~I~~Ss~~  132 (341)
                      .++++       ++|++||+||......     .+.++..+++|+.++..+++++..    ..     .-.++|++||..
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~  159 (286)
T PRK07791         80 ANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGA  159 (286)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchh
Confidence            76654       5799999999754221     455678899999999888877642    11     014899999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC
Q 019415          133 CASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY  208 (341)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~  208 (341)
                      ...+...                            ...|+.+|...+.+.+.++ +   .|+++..+.|+ +..+   ..
T Consensus       160 ~~~~~~~----------------------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~---~~  207 (286)
T PRK07791        160 GLQGSVG----------------------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR---MT  207 (286)
T ss_pred             hCcCCCC----------------------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC---cc
Confidence            5443221                            4689999999999998876 4   48999999997 4211   11


Q ss_pred             CCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCce-EEEeccc
Q 019415          209 SSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSGR-FFCTNVF  273 (341)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g~-~n~~~~~  273 (341)
                             ...........   ..        +...+...+|++.++++++...  ...|. +.+.++.
T Consensus       208 -------~~~~~~~~~~~---~~--------~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        208 -------ETVFAEMMAKP---EE--------GEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             -------hhhHHHHHhcC---cc--------cccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence                   00111111110   00        0223567999999999988643  34564 4554443

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2e-17  Score=142.86  Aligned_cols=161  Identities=22%  Similarity=0.235  Sum_probs=121.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +|+||||||+|+||++++++|++.|++|++++| +... .    +..  ....++.++.+|+.+.+++.+++.       
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r-~~~~-~----~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   72 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVAR-SRHP-S----LAA--AAGERLAEVELDLSDAAAAAAWLAGDLLAAF   72 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEec-Ccch-h----hhh--ccCCeEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999999 6542 1    111  112468899999999988777432       


Q ss_pred             ----CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                          ++|++||+|+.....      ..+.++..+++|+.++..+.+.+.    +.+ .+++|++||.....+..      
T Consensus        73 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------  145 (243)
T PRK07023         73 VDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYA------  145 (243)
T ss_pred             ccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCC------
Confidence                478999999975431      133456888999999776665554    333 57999999987443221      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c--CCceEEEEecCceeCC
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S--SGLEVVALALGVVAGD  203 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~--~~~~~~vlRp~~v~G~  203 (341)
                                            +...|+.+|...|.+++.++ +  .++++.+++|+.+-.+
T Consensus       146 ----------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        146 ----------------------GWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             ----------------------CchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence                                  24689999999999999887 3  4899999999988444

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=1.5e-16  Score=139.78  Aligned_cols=217  Identities=23%  Similarity=0.246  Sum_probs=161.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+||||||||++|+++++.|+++|++|++++| +....   ..+.      .++.+..+|+.++..+...+++.|.++++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r-~~~~~---~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i   70 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVR-NPEAA---AALA------GGVEVVLGDLRDPKSLVAGAKGVDGVLLI   70 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEe-CHHHH---Hhhc------CCcEEEEeccCCHhHHHHHhccccEEEEE
Confidence            68999999999999999999999999999999 76542   2222      48999999999999999999999999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNE  166 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  166 (341)
                      .+... ...    ...........+..+++. .+ .++++++|...+ ..                             .
T Consensus        71 ~~~~~-~~~----~~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~-~~-----------------------------~  113 (275)
T COG0702          71 SGLLD-GSD----AFRAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGA-DA-----------------------------A  113 (275)
T ss_pred             ecccc-ccc----chhHHHHHHHHHHHHHhc-CC-ceEEEEeccCCC-CC-----------------------------C
Confidence            88765 321    223334555555555555 34 688999988762 10                             1


Q ss_pred             hhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCccc
Q 019415          167 YLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH  246 (341)
Q Consensus       167 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  246 (341)
                      ....|..+|..+|..+.   ..|++++++|+..+|......       .  .........+.......      ...++.
T Consensus       114 ~~~~~~~~~~~~e~~l~---~sg~~~t~lr~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~------~~~~i~  175 (275)
T COG0702         114 SPSALARAKAAVEAALR---SSGIPYTTLRRAAFYLGAGAA-------F--IEAAEAAGLPVIPRGIG------RLSPIA  175 (275)
T ss_pred             CccHHHHHHHHHHHHHH---hcCCCeEEEecCeeeeccchh-------H--HHHHHhhCCceecCCCC------ceeeeE
Confidence            14789999999999998   457999999977666553221       1  22222233233333222      688999


Q ss_pred             HHHHHHHHHHhhcCCCCCc-eEEEec-cccCHHHHHHHHHHhCC
Q 019415          247 IDDVCEAHIFCMEKPSMSG-RFFCTN-VFVSSAEIASCLQQNYP  288 (341)
Q Consensus       247 v~D~a~~~~~~~~~~~~~g-~~n~~~-~~~s~~e~~~~i~~~~~  288 (341)
                      ++|++.++..++..+...+ +|.+++ ...+..|+++.+.+..+
T Consensus       176 ~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~g  219 (275)
T COG0702         176 VDDVAEALAAALDAPATAGRTYELAGPEALTLAELASGLDYTIG  219 (275)
T ss_pred             HHHHHHHHHHHhcCCcccCcEEEccCCceecHHHHHHHHHHHhC
Confidence            9999999999998765444 898887 56999999999999884

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.76  E-value=5.2e-17  Score=145.32  Aligned_cols=180  Identities=14%  Similarity=0.121  Sum_probs=130.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++++||||+|.||.++++.|+++|++|++++| +.++... .+.+.... ....+.++.+|+.+.+++.++++     
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R-~~~~~~~~~~~l~~~~-~~~~v~~~~~Dl~d~~sv~~~~~~~~~~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVR-NRAKGEAAVAAIRTAV-PDAKLSLRALDLSSLASVAALGEQLRAE   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHhC-CCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999 7654222 12222211 12368899999999988877654     


Q ss_pred             --CCCEEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHHHh---cCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFCVK---SGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ++|++||+||......    .+.++..+++|+.+...+...+..   .+ ..++|++||.....+...      ...+
T Consensus        91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~------~~~~  163 (313)
T PRK05854         91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAIN------WDDL  163 (313)
T ss_pred             CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcC------cccc
Confidence              4899999999764321    455678899999998887777652   23 368999999875543211      1112


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGD  203 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~  203 (341)
                      .+..          ...+...|+.||.+.+.+.+.++ +     .|+.+..+.||.|..+
T Consensus       164 ~~~~----------~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        164 NWER----------SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             cccc----------cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            2211          01235789999999999998875 2     3799999999998655

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1.3e-16  Score=140.07  Aligned_cols=209  Identities=16%  Similarity=0.081  Sum_probs=139.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      |+++||||+|.||.++++.|+++|++|++++| +.+..... +.+....  ...+.++.+|+++++++.++++       
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDR-DADGLAQTVADARALG--GTVPEHRALDISDYDAVAAFAADIHAAHG   77 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcC--CCcceEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            47999999999999999999999999999988 65432211 1122111  1235568899999887776554       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|+|||+||......     .+.++..+++|+.++.++++++..    .+...++|++||.....+..           
T Consensus        78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~-----------  146 (272)
T PRK07832         78 SMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP-----------  146 (272)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC-----------
Confidence            4799999998653211     444568899999999999998742    22136899999976433211           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCC-CCchhhhhHhhHhc
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSS-TPVSVIGGLCQLTN  224 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~  224 (341)
                                       ....|+.+|...+.+.+.++    ..++++++++||.+.++....... ..............
T Consensus       147 -----------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  209 (272)
T PRK07832        147 -----------------WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD  209 (272)
T ss_pred             -----------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH
Confidence                             13579999998777776665    348999999999998774322100 00000000000000


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                      .        .      ....+..+|+|++++.++.+
T Consensus       210 ~--------~------~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        210 R--------F------RGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             h--------c------ccCCCCHHHHHHHHHHHHhc
Confidence            0        0      22357899999999999964

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.76  E-value=1.5e-16  Score=137.69  Aligned_cols=198  Identities=18%  Similarity=0.195  Sum_probs=138.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCC--ChHHHHHH-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIY--DPDTFENA-----   76 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~-----   76 (341)
                      ++++||||||+|+||.++++.|++.|++|++++| +....... ..+...  ....++++.+|++  +++++.++     
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGR-TEEKLEAVYDEIEAA--GGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeC-CHHHHHHHHHHHHhc--CCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 75432222 222221  1235677888886  45444433     


Q ss_pred             --hcCCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCC
Q 019415           77 --IQGCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        77 --~~~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                        +.++|+|||+|+.....      ..+.++..+++|+.++.++++++.    +.+ .++||++||.....+..      
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~------  160 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRA------  160 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCC------
Confidence              33689999999874331      134456889999999888888764    455 78999999986443221      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.+|...|.+++.++ +   .++++.+++|+.+-.+.....      .     
T Consensus       161 ----------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~------~-----  207 (247)
T PRK08945        161 ----------------------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA------F-----  207 (247)
T ss_pred             ----------------------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh------c-----
Confidence                                  13579999999999988876 3   379999999998865421111      0     


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                         ...      .       ...+...+|+++++.+++...
T Consensus       208 ---~~~------~-------~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        208 ---PGE------D-------PQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             ---Ccc------c-------ccCCCCHHHHHHHHHHHhCcc
Confidence               000      0       123566899999999988643

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.75  E-value=6.2e-17  Score=141.69  Aligned_cols=157  Identities=14%  Similarity=0.134  Sum_probs=123.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||.++++.|+++|++|++++| +....           ....+.++++|+++++.++++++      
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~-~~~~~-----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADI-HGGDG-----------QHENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-Ccccc-----------ccCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999988 65431           12367889999999988877765      


Q ss_pred             -CCCEEEEeccCCcc--------------ccchhHhHhhhhhhhHHHHHHHHHHhcC---CcCEEEEecccccccCCCCC
Q 019415           79 -GCDFVFHVATPLQH--------------IDGYLYKNVVEACVGAAKKIASFCVKSG---TVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~--------------~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~~~  140 (341)
                       .+|+|||+||....              ...+.++..+++|+.++..+++++...-   ...++|++||.....+..  
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--  153 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE--  153 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC--
Confidence             47999999996432              1134456789999999999998886531   135899999987544221  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCcee
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVA  201 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~  201 (341)
                                                ....|+.+|...+.+++.++ +   .|+++..++||.+.
T Consensus       154 --------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~  192 (266)
T PRK06171        154 --------------------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE  192 (266)
T ss_pred             --------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence                                      14689999999999998887 3   48999999999884

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=3.5e-16  Score=136.12  Aligned_cols=209  Identities=16%  Similarity=0.039  Sum_probs=142.0

Q ss_pred             CCCCCCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCC--------chhhhhH-hhhCCCCCCceEEEecCCCC
Q 019415            1 MDHKSNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLE--------DKSKVDL-LKSLPGAETRLIFFEAEIYD   69 (341)
Q Consensus         1 M~~~~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~Dl~~   69 (341)
                      |...++++||||||+|  .||.++++.|++.|++|+++.| ...        ....... ...+......+.++++|+++
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~   79 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW-TAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ   79 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec-ccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            6655678999999995  7999999999999999988754 311        0111111 11122223468899999999


Q ss_pred             hHHHHHHhc-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEeccccc
Q 019415           70 PDTFENAIQ-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLC  133 (341)
Q Consensus        70 ~~~~~~~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~  133 (341)
                      ++++.++++       ++|++||+|+......     .+.++..+++|+.+...+..++    .+.+ -.+||++||...
T Consensus        80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~  158 (256)
T PRK12859         80 NDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQF  158 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEccccc
Confidence            988887764       4799999999754321     3445678999999988885444    3333 469999999764


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCC
Q 019415          134 ASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYS  209 (341)
Q Consensus       134 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~  209 (341)
                      ..+.                            .....|+.+|...+.+.+.++ +   .+++++.++||.+-.+...   
T Consensus       159 ~~~~----------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~---  207 (256)
T PRK12859        159 QGPM----------------------------VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT---  207 (256)
T ss_pred             CCCC----------------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC---
Confidence            3211                            124789999999999988876 3   4899999999988554211   


Q ss_pred             CCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          210 STPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                            ..+...+....   .          ...+...+|+++++.+++...
T Consensus       208 ------~~~~~~~~~~~---~----------~~~~~~~~d~a~~~~~l~s~~  240 (256)
T PRK12859        208 ------EEIKQGLLPMF---P----------FGRIGEPKDAARLIKFLASEE  240 (256)
T ss_pred             ------HHHHHHHHhcC---C----------CCCCcCHHHHHHHHHHHhCcc
Confidence                  11111111110   0          223456899999999988653

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.6e-16  Score=133.94  Aligned_cols=164  Identities=16%  Similarity=0.109  Sum_probs=124.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----CC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----GC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~   80 (341)
                      |++++||||+|+||+++++.|++.|++|++++| +...   .+.+..     .+++++.+|+++.+.+.+++.     ++
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r-~~~~---~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATAR-DAAA---LAALQA-----LGAEALALDVADPASVAGLAWKLDGEAL   71 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEEC-CHHH---HHHHHh-----ccceEEEecCCCHHHHHHHHHHhcCCCC
Confidence            358999999999999999999999999999999 6533   222222     146789999999988887642     48


Q ss_pred             CEEEEeccCCccc-------cchhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHI-------DGYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        81 d~Vi~~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      |+|||+++.....       ..+.++..++.|+.++.++++++...  ..-.++|++||....++...            
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------  139 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT------------  139 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc------------
Confidence            9999999976321       14456789999999999999988652  11357999999765443211            


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC-CceEEEEecCceeCC
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS-GLEVVALALGVVAGD  203 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-~~~~~vlRp~~v~G~  203 (341)
                                   ..+...|+.+|...+.+++.++ +. +++++.++|+.+..+
T Consensus       140 -------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~  180 (222)
T PRK06953        140 -------------GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTD  180 (222)
T ss_pred             -------------CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence                         0112469999999999999887 44 889999999998665

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=3.7e-16  Score=139.41  Aligned_cols=164  Identities=16%  Similarity=0.063  Sum_probs=121.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++.+| +... ........+......+.++.+|+++++.+.++++      
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~-~~~~-~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g   88 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDV-ASAL-DASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG   88 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecC-Cchh-HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999877 5322 1111111111223468899999999988777664      


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC----------CcCEEEEecccccccCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG----------TVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~----------~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                      ++|++||+||......     .+.++..+++|+.++.++++++...-          .-.++|++||.....+..     
T Consensus        89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  163 (306)
T PRK07792         89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV-----  163 (306)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC-----
Confidence            5899999999765421     34566889999999999998864210          014899999976443211     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecC
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALG  198 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~  198 (341)
                                             ....|+.+|...+.+.+.++ +   +|+++.++.|+
T Consensus       164 -----------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg  199 (306)
T PRK07792        164 -----------------------GQANYGAAKAGITALTLSAARALGRYGVRANAICPR  199 (306)
T ss_pred             -----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence                                   13579999999999988876 3   48999999997

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.1e-16  Score=133.85  Aligned_cols=186  Identities=13%  Similarity=0.106  Sum_probs=137.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---CCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---GCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~V   83 (341)
                      |++|||||+|.||.++++.|+++ ++|++++| +..                   .+.+|+++++.++++++   ++|++
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r-~~~-------------------~~~~D~~~~~~~~~~~~~~~~id~l   59 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGR-SSG-------------------DVQVDITDPASIRALFEKVGKVDAV   59 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEec-CCC-------------------ceEecCCChHHHHHHHHhcCCCCEE
Confidence            57999999999999999999999 99999988 431                   46889999998888876   68999


Q ss_pred             EEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPP  157 (341)
Q Consensus        84 i~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (341)
                      ||+||......     .+.++..+++|+.++.++++++...- ...+++++||.....+..                   
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~-------------------  120 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIP-------------------  120 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCC-------------------
Confidence            99999644321     34466788999999999998876531 135799999876433211                   


Q ss_pred             CCCCccCcchhhhHHHhHHHHHHHHHhhc-c--CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccc
Q 019415          158 DHPLTCHNEYLRVYIESKMKSEKELLSYG-S--SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRD  234 (341)
Q Consensus       158 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~--~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (341)
                               ....|+.+|...+.+.+.++ +  .|+++..+.||.+-.+...           .      . ..+.    
T Consensus       121 ---------~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~-----------~------~-~~~~----  169 (199)
T PRK07578        121 ---------GGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEK-----------Y------G-PFFP----  169 (199)
T ss_pred             ---------CchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhh-----------h------h-hcCC----
Confidence                     14689999999999988877 4  4899999999987332110           0      0 0000    


Q ss_pred             hhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEE
Q 019415          235 TEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFC  269 (341)
Q Consensus       235 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~  269 (341)
                            ...++..+|+|+++..+++....+.+|++
T Consensus       170 ------~~~~~~~~~~a~~~~~~~~~~~~g~~~~~  198 (199)
T PRK07578        170 ------GFEPVPAARVALAYVRSVEGAQTGEVYKV  198 (199)
T ss_pred             ------CCCCCCHHHHHHHHHHHhccceeeEEecc
Confidence                  23467899999999999975432235554

>PRK06484 short chain dehydrogenase; Validated

Probab=99.75  E-value=2.1e-16  Score=151.54  Aligned_cols=218  Identities=17%  Similarity=0.130  Sum_probs=152.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      .++++|||||+|.||.++++.|++.|++|++++| +...   .+.+...  ....+..+.+|++|++++.++++      
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  341 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDR-DAEG---AKKLAEA--LGDEHLSVQADITDEAAVESAFAQIQARW  341 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHH--hCCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence            4589999999999999999999999999999999 6533   2222221  12356789999999988877765      


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                       .+|++||+||.....      ..+.++..+++|+.++.++++++...- ...++|++||.....+..            
T Consensus       342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  409 (520)
T PRK06484        342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALP------------  409 (520)
T ss_pred             CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCC------------
Confidence             479999999975321      134567889999999999988876541 136999999987544321            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                      ....|+.+|...+.+++.++ +   .|+++..+.||.+..+.....  ... .......+.+..
T Consensus       410 ----------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~-~~~~~~~~~~~~  470 (520)
T PRK06484        410 ----------------PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLAL--KAS-GRADFDSIRRRI  470 (520)
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhh--ccc-cHHHHHHHHhcC
Confidence                            14689999999999999887 3   389999999999977632211  000 000011111110


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                         .          ...+..++|+|+++++++....  ..| .+.+.++
T Consensus       471 ---~----------~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        471 ---P----------LGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             ---C----------CCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence               0          2235678999999999887532  455 5566554

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.74  E-value=5.2e-16  Score=135.51  Aligned_cols=208  Identities=16%  Similarity=0.064  Sum_probs=143.4

Q ss_pred             CcEEEEecCcc-hHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            6 NFKVCVTGGEG-FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         6 ~~~ilI~GatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++|||||+| -||+++++.|+++|++|++++| +..+.... +.+....+ ...+.++++|+++++.+.++++     
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDI-HERRLGETADELAAELG-LGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHHhcC-CceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            57899999998 5999999999999999999888 65432221 11211000 1368889999999988877664     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.+...++.|+.++..+++++...    +.-.++|++||.....+.          
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----------  164 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ----------  164 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----------
Confidence              5799999999643221     3445678899999999888876542    113588998886532211          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                        .....|+.+|...+.+.+.++ +   +|+++..++|+.+..+.....  .   .......+.
T Consensus       165 ------------------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~--~---~~~~~~~~~  221 (262)
T PRK07831        165 ------------------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV--T---SAELLDELA  221 (262)
T ss_pred             ------------------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc--c---CHHHHHHHH
Confidence                              114679999999999999887 4   489999999999987743221  0   111222221


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      ...+             ..-+...+|+++++.+++...
T Consensus       222 ~~~~-------------~~r~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        222 AREA-------------FGRAAEPWEVANVIAFLASDY  246 (262)
T ss_pred             hcCC-------------CCCCcCHHHHHHHHHHHcCch
Confidence            1111             223566899999999988753

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.74  E-value=1e-16  Score=140.01  Aligned_cols=169  Identities=17%  Similarity=0.124  Sum_probs=127.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |. .++++++||||+|.||+++++.|++.|++|++++| +...   .+.+...  ....+.++.+|+.+.+++.++++  
T Consensus         1 m~-~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~---~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   73 (262)
T TIGR03325         1 MR-LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDK-SAAG---LQELEAA--HGDAVVGVEGDVRSLDDHKEAVARC   73 (262)
T ss_pred             CC-cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHhh--cCCceEEEEeccCCHHHHHHHHHHH
Confidence            54 34689999999999999999999999999999999 6543   2222221  12368889999999887776664  


Q ss_pred             -----CCCEEEEeccCCccc----c-c-----hhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI----D-G-----YLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~----~-~-----~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                           ++|++||+||.....    . .     +.++..+++|+.++..+++++...-  +-.++|++||...+.+..   
T Consensus        74 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~---  150 (262)
T TIGR03325        74 VAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNG---  150 (262)
T ss_pred             HHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCC---
Confidence                 579999999864311    1 1     2356889999999999999986531  125799998876544321   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCC
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDT  204 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~  204 (341)
                                               ....|+.+|...+.+++.++ +.  .+++..+.||.+..+.
T Consensus       151 -------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       151 -------------------------GGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             -------------------------CCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence                                     13579999999999999987 43  4899999999997653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.74  E-value=5.8e-16  Score=134.38  Aligned_cols=219  Identities=15%  Similarity=0.101  Sum_probs=148.7

Q ss_pred             CCCC-CCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh
Q 019415            1 MDHK-SNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         1 M~~~-~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      |+.. ++++++||||+  +-||.++++.|++.|++|++..| +...   .+.+..+.  ...+.++++|+++++++++++
T Consensus         1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r-~~~~---~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~   74 (252)
T PRK06079          1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQ-NDRM---KKSLQKLV--DEEDLLVECDVASDESIERAF   74 (252)
T ss_pred             CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecC-chHH---HHHHHhhc--cCceeEEeCCCCCHHHHHHHH
Confidence            4433 45789999999  79999999999999999999988 6321   22222222  136788999999998877665


Q ss_pred             c-------CCCEEEEeccCCcc-------c--cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCC
Q 019415           78 Q-------GCDFVFHVATPLQH-------I--DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        78 ~-------~~d~Vi~~a~~~~~-------~--~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~  140 (341)
                      +       +.|++||+||....       .  ..+.++..+++|+.++..+.+++...- +-.++|++||.....+.   
T Consensus        75 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~---  151 (252)
T PRK06079         75 ATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI---  151 (252)
T ss_pred             HHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC---
Confidence            4       58999999997532       1  144567889999999999888876531 12589999987532211   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                               .....|+.+|...+.+.+.++ +   .|+++..+.||.|-.+.....  .+  ..
T Consensus       152 -------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~--~~--~~  202 (252)
T PRK06079        152 -------------------------PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGI--KG--HK  202 (252)
T ss_pred             -------------------------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccC--CC--hH
Confidence                                     114679999999999999887 3   489999999999966522111  00  01


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEe
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCT  270 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~  270 (341)
                      ..........   +          ...+...+|+++++.+++...  ...| ++.+.
T Consensus       203 ~~~~~~~~~~---p----------~~r~~~pedva~~~~~l~s~~~~~itG~~i~vd  246 (252)
T PRK06079        203 DLLKESDSRT---V----------DGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVD  246 (252)
T ss_pred             HHHHHHHhcC---c----------ccCCCCHHHHHHHHHHHhCcccccccccEEEeC
Confidence            1111111110   0          223677899999999998653  2345 34443

>PRK05855 short chain dehydrogenase; Validated

Probab=99.73  E-value=2.3e-16  Score=153.25  Aligned_cols=168  Identities=18%  Similarity=0.122  Sum_probs=127.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ..+++|||||+|+||+++++.|+++|++|++++| +.........  .+.....++.++.+|++|++.+.++++      
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDI-DEAAAERTAE--LIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--HHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            3478999999999999999999999999999999 7643222211  111222468899999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++.    +.+.-.++|++||.+++.+..          
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  460 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR----------  460 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------
Confidence             4799999999854321     34567889999999999888753    333125899999987543221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCC
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGD  203 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~  203 (341)
                                        ....|+.||.+.+.+.+.++    +.|+++++++||.|-.+
T Consensus       461 ------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        461 ------------------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             ------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence                              24689999999888887775    34899999999998654

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.73  E-value=6.2e-16  Score=134.67  Aligned_cols=225  Identities=12%  Similarity=0.079  Sum_probs=148.0

Q ss_pred             CCCCCCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |-..++++++||||+  +-||.++++.|++.|++|++..| +.+.....+.+..+........++++|++|++++.++++
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYL-PDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEec-CcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHH
Confidence            333456899999986  79999999999999999988777 543211122222221111346789999999988877764


Q ss_pred             -------CCCEEEEeccCCcc-------cc--chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCC
Q 019415           79 -------GCDFVFHVATPLQH-------ID--GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~-------~~--~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                             ++|++||+||....       ..  .+.++..+++|+.++..+.+++...- .-.++|++||.....+.    
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----  155 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAI----  155 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCC----
Confidence                   58999999996531       11  45567889999999999888765421 12689999997533211    


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                              .....|+.+|...+.+.+.++ +   .|+++..+.||.+-.+.....   .. ...
T Consensus       156 ------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~---~~-~~~  207 (258)
T PRK07370        156 ------------------------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV---GG-ILD  207 (258)
T ss_pred             ------------------------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc---cc-chh
Confidence                                    114679999999999999887 3   489999999999966522110   00 001


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ....+...   . +         ...+...+|++.++.+++....  ..| ++.+.+
T Consensus       208 ~~~~~~~~---~-p---------~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdg  251 (258)
T PRK07370        208 MIHHVEEK---A-P---------LRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDA  251 (258)
T ss_pred             hhhhhhhc---C-C---------cCcCCCHHHHHHHHHHHhChhhccccCcEEEECC
Confidence            11111100   0 0         2236678999999999987432  345 444433

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=1e-15  Score=133.25  Aligned_cols=220  Identities=10%  Similarity=0.033  Sum_probs=147.0

Q ss_pred             CCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++++++||||+  +-||.++++.|++.|++|++..| +......++.+..... ...+.++++|++|+++++++++    
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYA-GERLEKEVRELADTLE-GQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecC-cccchHHHHHHHHHcC-CCceEEEecCCCCHHHHHHHHHHHHH
Confidence            46899999997  89999999999999999999888 6443333433332111 2468889999999988777664    


Q ss_pred             ---CCCEEEEeccCCcc-------cc--chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQH-------ID--GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~-------~~--~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         +.|++||+|+....       ..  .+.+...+++|+.+...+++++...- .-.++|++||.....+..       
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-------  156 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQ-------  156 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCC-------
Confidence               48999999986431       11  33456778899999888877765431 125899999976432211       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...+.+.+.++ +   .|+++..+.||.+-.+.....   +. .......
T Consensus       157 ---------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~---~~-~~~~~~~  211 (257)
T PRK08594        157 ---------------------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGV---GG-FNSILKE  211 (257)
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhh---cc-ccHHHHH
Confidence                                 13579999999999998887 3   489999999999866521110   00 0000111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ....   .+          ...+...+|+++++++++....  ..| .+.+.+
T Consensus       212 ~~~~---~p----------~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dg  251 (257)
T PRK08594        212 IEER---AP----------LRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDS  251 (257)
T ss_pred             Hhhc---CC----------ccccCCHHHHHHHHHHHcCcccccccceEEEECC
Confidence            1100   00          2235678999999999886432  355 444443

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.73  E-value=7.5e-16  Score=134.90  Aligned_cols=214  Identities=15%  Similarity=0.150  Sum_probs=139.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhH-hhhCC-CCCCceEEEecCCCChHHH----HHHh---
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDL-LKSLP-GAETRLIFFEAEIYDPDTF----ENAI---   77 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~~~~~~----~~~~---   77 (341)
                      +.++||||+|+||.++++.|++.|++|+++.| +...  ..+. ...+. .....+.++.+|++|.+.+    .+++   
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~-~~~~--~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~   78 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYH-RSAA--AASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDAC   78 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcC-CcHH--HHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHH
Confidence            47999999999999999999999999999876 4321  1111 11111 1123567899999998644    3332   


Q ss_pred             ----cCCCEEEEeccCCcccc-----c-----------hhHhHhhhhhhhHHHHHHHHHHhcC---------CcCEEEEe
Q 019415           78 ----QGCDFVFHVATPLQHID-----G-----------YLYKNVVEACVGAAKKIASFCVKSG---------TVKRLIYT  128 (341)
Q Consensus        78 ----~~~d~Vi~~a~~~~~~~-----~-----------~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~I~~  128 (341)
                          .++|+|||+||......     .           ..+...+++|+.++..+++++....         ...++|++
T Consensus        79 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~  158 (267)
T TIGR02685        79 FRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL  158 (267)
T ss_pred             HHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence                35899999999654321     1           1245779999999999988764332         12367778


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCC
Q 019415          129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDT  204 (341)
Q Consensus       129 Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~  204 (341)
                      ||.....+.                            .....|+.||...+.+++.++ +   .|++++.++||.+..+.
T Consensus       159 ~s~~~~~~~----------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~  210 (267)
T TIGR02685       159 CDAMTDQPL----------------------------LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPD  210 (267)
T ss_pred             hhhhccCCC----------------------------cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcc
Confidence            776432111                            124689999999999999987 4   48999999999986552


Q ss_pred             CCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          205 NLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ....        ..........+ .           ...+...+|+++++..++....  ..| .+.+.+
T Consensus       211 ~~~~--------~~~~~~~~~~~-~-----------~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~g  260 (267)
T TIGR02685       211 AMPF--------EVQEDYRRKVP-L-----------GQREASAEQIADVVIFLVSPKAKYITGTCIKVDG  260 (267)
T ss_pred             ccch--------hHHHHHHHhCC-C-----------CcCCCCHHHHHHHHHHHhCcccCCcccceEEECC
Confidence            2111        11111111100 0           1234678999999999987542  345 444543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.73  E-value=9.8e-16  Score=133.66  Aligned_cols=222  Identities=13%  Similarity=0.095  Sum_probs=147.1

Q ss_pred             CCCCCCcEEEEecC--cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGG--EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |...+++.+|||||  ++-||.++++.|+++|++|++..| +.......+.+..   .......+++|++|+++++++++
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~   76 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYV-VDKLEERVRKMAA---ELDSELVFRCDVASDDEINQVFA   76 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC-cHHHHHHHHHHHh---ccCCceEEECCCCCHHHHHHHHH
Confidence            66666789999997  679999999999999999998877 5332223333322   11245678999999988887764


Q ss_pred             -------CCCEEEEeccCCccc--------c--chhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCC
Q 019415           79 -------GCDFVFHVATPLQHI--------D--GYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKE  139 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~--------~--~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~  139 (341)
                             ++|++||+||.....        .  .+.++..+++|+.++..+.+++...  .+-.++|++||.....+.. 
T Consensus        77 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~-  155 (261)
T PRK08690         77 DLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIP-  155 (261)
T ss_pred             HHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCC-
Confidence                   589999999976421        1  2345677889999888877765432  1125899999876433211 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchh
Q 019415          140 DGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSV  215 (341)
Q Consensus       140 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~  215 (341)
                                                 ....|+.+|...+.+.+.++    .+|+++..+.||.+-.+.....   .. .
T Consensus       156 ---------------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~---~~-~  204 (261)
T PRK08690        156 ---------------------------NYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGI---AD-F  204 (261)
T ss_pred             ---------------------------CcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcC---Cc-h
Confidence                                       14679999999998888775    3589999999999965421111   00 0


Q ss_pred             hhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          216 IGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ......+.+..+             ...+...+|+|+++.+++....  ..| ++-+.+
T Consensus       205 ~~~~~~~~~~~p-------------~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdg  250 (261)
T PRK08690        205 GKLLGHVAAHNP-------------LRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDG  250 (261)
T ss_pred             HHHHHHHhhcCC-------------CCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcC
Confidence            111111111100             2236779999999999997532  355 344433

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.73  E-value=3.5e-16  Score=136.63  Aligned_cols=167  Identities=17%  Similarity=0.188  Sum_probs=125.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|++.|++|++++| +..+..... .+...  ...++.++.+|++|+++++++++     
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~~~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSR-NEENLKKAREKIKSE--SNVDVSYIVADLTKREDLERTVKELKNI   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh--cCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence            4578999999999999999999999999999999 754322211 11111  12468899999999988887775     


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.+...+.+++    ++.+ ..++|++||.....+..          
T Consensus        84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~----------  152 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIP----------  152 (263)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCC----------
Confidence             4899999999654321     4556788999988766665554    4444 57999999987433211          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                        ....|+.+|...+.+.+.++ +   +|+++..+.||.+..+
T Consensus       153 ------------------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~  193 (263)
T PRK08339        153 ------------------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD  193 (263)
T ss_pred             ------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence                              14679999999999888886 3   4899999999999654

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.73  E-value=4.5e-16  Score=136.13  Aligned_cols=168  Identities=17%  Similarity=0.172  Sum_probs=123.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +..+..... .+... .....+.++.+|++|++++.++++     
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGR-DEERLASAEARLREK-FPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHHHHhh-CCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999 764432221 12111 111367889999999988876654     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.+...+++++    ++.+ ..++|++||.....+..         
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  154 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEP---------  154 (265)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCC---------
Confidence              5799999999754321     3345677888988877776655    3344 57999999986433211         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                         ....|+.+|...+.+.+.++ +   .|+++..++||.+..+
T Consensus       155 -------------------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~  195 (265)
T PRK07062        155 -------------------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESG  195 (265)
T ss_pred             -------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence                               13679999999888887766 3   4899999999998665

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.72  E-value=8.6e-16  Score=133.93  Aligned_cols=164  Identities=21%  Similarity=0.213  Sum_probs=118.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      |++|||||+|.||+++++.|+++|++|++++| +.......  ...+.. ...+.++.+|++++++++++++       +
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~--~~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~   76 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSR-NEENLEKA--LKELKE-YGEVYAVKADLSDKDDLKNLVKEAWELLGG   76 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHH--HHHHHh-cCCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            68999999999999999999999999999999 75432211  111111 1367889999999988887764       5


Q ss_pred             CCEEEEeccCCcc-----cc--chhHhHhhhhhhhHHHHHHHH----HH-hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQH-----ID--GYLYKNVVEACVGAAKKIASF----CV-KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        80 ~d~Vi~~a~~~~~-----~~--~~~~~~~~~~nv~~~~~l~~~----~~-~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                      +|++||+||....     ..  .+.+...+.+|+.++..+...    +. +.+ ..++|++||..+..+.          
T Consensus        77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~iv~isS~~~~~~~----------  145 (259)
T PRK08340         77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVLVYLSSVSVKEPM----------  145 (259)
T ss_pred             CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEEEEEeCcccCCCC----------
Confidence            8999999996431     11  223345567787776555433    33 223 4699999998743221          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                        .....|+.+|...+.+.+.++ +   .|+++..+.||.+-.+
T Consensus       146 ------------------~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~  187 (259)
T PRK08340        146 ------------------PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP  187 (259)
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence                              124679999999999999887 3   3899999999988655

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.72  E-value=2.2e-16  Score=129.16  Aligned_cols=165  Identities=17%  Similarity=0.114  Sum_probs=125.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhH-hhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDL-LKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++|+||+|+||.++++.|+++|. .|+++.| +......... +..+.....++.++.+|+++++.+.++++      
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSR-SGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeC-CCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999985 6888888 6543222111 12222223477889999999887777654      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                       .+|+|||+|+......     .+.++..+++|+.++.++++++.+.+ .+++|++||....++...             
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~~~-------------  145 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGNPG-------------  145 (180)
T ss_pred             CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCCCC-------------
Confidence             3699999999654221     34456889999999999999998876 789999999876553321             


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCcee
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVA  201 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~  201 (341)
                                     ...|+.+|...+.+++.+...+++++.+.|+.+-
T Consensus       146 ---------------~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~  179 (180)
T smart00822      146 ---------------QANYAAANAFLDALAAHRRARGLPATSINWGAWA  179 (180)
T ss_pred             ---------------chhhHHHHHHHHHHHHHHHhcCCceEEEeecccc
Confidence                           4679999999999997666668999999988764

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.72  E-value=5e-16  Score=153.08  Aligned_cols=196  Identities=12%  Similarity=0.139  Sum_probs=144.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||.++++.|++.|++|++++| +........  ..+......+.++.+|+.|+++++++++      
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVAR-NGEALDELV--AEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999999999999 754322211  1111123468899999999998887776      


Q ss_pred             -CCCEEEEeccCCcccc-------chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-------GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-------~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ++|++||+||......       .+.++..+++|+.++.+++.++    ++.+ ..++|++||.+++.+..        
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  517 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAP--------  517 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCC--------
Confidence             5899999999643211       2345688999999988886665    4445 67999999987544221        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.+|...+.+.+.++ +   .|+++++++||.|..+.....              
T Consensus       518 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~--------------  563 (657)
T PRK07201        518 --------------------RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT--------------  563 (657)
T ss_pred             --------------------CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc--------------
Confidence                                14679999999999998877 3   389999999999976532211              


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                        .  .+.          ....+..+++|+.++..+.+
T Consensus       564 --~--~~~----------~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        564 --K--RYN----------NVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             --c--ccc----------CCCCCCHHHHHHHHHHHHHh
Confidence              0  000          22356799999999998764

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=2.7e-15  Score=130.77  Aligned_cols=223  Identities=11%  Similarity=0.031  Sum_probs=148.3

Q ss_pred             CCCCCCcEEEEecC--cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGG--EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |...+++++|||||  ++-||.++++.|++.|++|++..| ........+.+....   ....++++|++|++++.++++
T Consensus         1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~   76 (260)
T PRK06997          1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYV-GDRFKDRITEFAAEF---GSDLVFPCDVASDEQIDALFA   76 (260)
T ss_pred             CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEcc-chHHHHHHHHHHHhc---CCcceeeccCCCHHHHHHHHH
Confidence            55556789999996  679999999999999999998776 433223333332211   123468899999988887764


Q ss_pred             -------CCCEEEEeccCCccc----------cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCC
Q 019415           79 -------GCDFVFHVATPLQHI----------DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~----------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~  140 (341)
                             +.|++||+||.....          ..+.++..+++|+.++..+.+++...- .-.++|++||.....+..  
T Consensus        77 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~--  154 (260)
T PRK06997         77 SLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVP--  154 (260)
T ss_pred             HHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCC--
Confidence                   589999999975321          134567789999999999988876531 136899999976422111  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                                ....|+.||...+.+.+.++ +   +|+++..+.||.+-.+.....   .. ..
T Consensus       155 --------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~---~~-~~  204 (260)
T PRK06997        155 --------------------------NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGI---KD-FG  204 (260)
T ss_pred             --------------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccc---cc-hh
Confidence                                      13579999999999998886 3   489999999998865421110   00 01


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .....+...   .+          ...+...+|+++++.+++...  ...| ++.+.++
T Consensus       205 ~~~~~~~~~---~p----------~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        205 KILDFVESN---AP----------LRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             hHHHHHHhc---Cc----------ccccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence            111111111   00          223567899999999998753  2345 4444433

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.71  E-value=1.1e-16  Score=129.03  Aligned_cols=275  Identities=15%  Similarity=0.117  Sum_probs=175.5

Q ss_pred             CCcEEEEecCcchHHHHHHH-----HHHHCC----CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIK-----KLLDKG----YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFEN   75 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~   75 (341)
                      +..+.++-+++|+|+..|..     ++-+.+    |+|++++| .+..              ..+.+.+.|..-.     
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR-~pg~--------------~ritw~el~~~Gi-----   70 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSR-SPGK--------------ARITWPELDFPGI-----   70 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEec-CCCC--------------cccccchhcCCCC-----
Confidence            34568888999999988876     444444    99999999 6654              2444444443321     


Q ss_pred             HhcCCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcCCc-CEEEEecccccccCCCCCCCCCCCCCC
Q 019415           76 AIQGCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSGTV-KRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        76 ~~~~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       .-.|+..+++++.....     .+.-.++.+-.-+..+..++++..+.... +.+|.+|..+ +|-...      ...+
T Consensus        71 -p~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva-~y~pS~------s~eY  142 (315)
T KOG3019|consen   71 -PISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVA-VYVPSE------SQEY  142 (315)
T ss_pred             -ceehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeE-Eecccc------cccc
Confidence             11445555555532222     12223455666678889999999888643 4789999988 553333      4567


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccc
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVY  229 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (341)
                      +|++....          ......--..=|.....-. ...+.+++|.|.|.|.+....      ..+++..-......+
T Consensus       143 ~e~~~~qg----------fd~~srL~l~WE~aA~~~~-~~~r~~~iR~GvVlG~gGGa~------~~M~lpF~~g~GGPl  205 (315)
T KOG3019|consen  143 SEKIVHQG----------FDILSRLCLEWEGAALKAN-KDVRVALIRIGVVLGKGGGAL------AMMILPFQMGAGGPL  205 (315)
T ss_pred             ccccccCC----------hHHHHHHHHHHHHHhhccC-cceeEEEEEEeEEEecCCcch------hhhhhhhhhccCCcC
Confidence            77763322          2222222122222332222 258999999999999876554      222222222333444


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCC---ccccCcC----CCCc
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEF---HIKQEYL----DVPK  301 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~---~~~~~~~----~~~~  301 (341)
                      +++.|      .++|||++|++..+..+++++...|+.|.+. ..++..|+.+.+.+++++.   ++|....    ....
T Consensus       206 GsG~Q------~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~er  279 (315)
T KOG3019|consen  206 GSGQQ------WFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPER  279 (315)
T ss_pred             CCCCe------eeeeeehHHHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccc
Confidence            55555      9999999999999999999999999999765 7799999999999998432   2222111    1122


Q ss_pred             ceEeec-----chhhhhcCCccccc-HHHHHHHHH
Q 019415          302 REIKWG-----GTKLEEKGFEYNYD-LKMILDDSI  330 (341)
Q Consensus       302 ~~~~~d-----~~k~~~lg~~~~~~-~~~~l~~~~  330 (341)
                      .-..+.     ..|+.++||+++++ +++++++++
T Consensus       280 A~~vLeGqKV~Pqral~~Gf~f~yp~vk~Al~~i~  314 (315)
T KOG3019|consen  280 ATVVLEGQKVLPQRALELGFEFKYPYVKDALRAIM  314 (315)
T ss_pred             eeEEeeCCcccchhHhhcCceeechHHHHHHHHHh
Confidence            233344     44556689999988 899998875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=2.5e-15  Score=131.04  Aligned_cols=223  Identities=14%  Similarity=0.071  Sum_probs=147.2

Q ss_pred             CCCCCCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |...+++++|||||++  -||+++++.|+++|++|++..| +.......+.+..   ..+...++.+|++|+++++++++
T Consensus         1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r-~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~   76 (262)
T PRK07984          1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ-NDKLKGRVEEFAA---QLGSDIVLPCDVAEDASIDAMFA   76 (262)
T ss_pred             CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEec-chhHHHHHHHHHh---ccCCceEeecCCCCHHHHHHHHH
Confidence            5544568999999985  8999999999999999998888 6321222333322   12356788999999988887764


Q ss_pred             -------CCCEEEEeccCCccc----------cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCC
Q 019415           79 -------GCDFVFHVATPLQHI----------DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~----------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~  140 (341)
                             ++|++||+||.....          ..+.++..+++|+.+...+.+++...- .-.++|++||.....+..  
T Consensus        77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~--  154 (262)
T PRK07984         77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP--  154 (262)
T ss_pred             HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCC--
Confidence                   479999999864321          133456778999999888887764321 125899999876322111  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                                ....|+.||...+.+.+.++ +   .|+++..+.||.+-.+....   .+. ..
T Consensus       155 --------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~---~~~-~~  204 (262)
T PRK07984        155 --------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG---IKD-FR  204 (262)
T ss_pred             --------------------------CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc---CCc-hH
Confidence                                      13579999999999999887 3   48999999999985542110   011 01


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..........   +          ...+...+|++.++++++...  ...| .+.+.++
T Consensus       205 ~~~~~~~~~~---p----------~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        205 KMLAHCEAVT---P----------IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             HHHHHHHHcC---C----------CcCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence            1111111110   0          223567899999999998753  2455 4444443

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.71  E-value=9.6e-16  Score=133.61  Aligned_cols=167  Identities=14%  Similarity=0.146  Sum_probs=125.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc---CC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ---GC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   80 (341)
                      +++++|||||+|.||.++++.|++.|++|++++| +..+..... .+..  .....+.++.+|+++++++.++++   ++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   82 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVAR-DADALEALAADLRA--AHGVDVAVHALDLSSPEAREQLAAEAGDI   82 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHh--hcCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999 754322211 1211  112468899999999988887765   58


Q ss_pred             CEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      |++||+|+......     .+.++..+++|+.+...+++++    .+.+ ..++|++||.....+.              
T Consensus        83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~--------------  147 (259)
T PRK06125         83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPD--------------  147 (259)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCC--------------
Confidence            99999999653211     4456788999999998888876    3333 3689999987532211              


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCC
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGD  203 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~  203 (341)
                                    .....|+.+|...+.+.+.++    ..|+++..+.||.+..+
T Consensus       148 --------------~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~  189 (259)
T PRK06125        148 --------------ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD  189 (259)
T ss_pred             --------------CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence                          124579999999999888875    24899999999998665

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=2.3e-15  Score=131.95  Aligned_cols=219  Identities=14%  Similarity=0.075  Sum_probs=146.4

Q ss_pred             CCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      +++.+|||||++  -||.++++.|++.|++|++..| +.......+.+...  . ....++++|++|++++.++++    
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r-~~~~~~~~~~~~~~--~-g~~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQ-GEALGKRVKPLAES--L-GSDFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecC-chHHHHHHHHHHHh--c-CCceEEeCCCCCHHHHHHHHHHHHH
Confidence            357899999996  9999999999999999999888 64332233333221  1 123578999999988877764    


Q ss_pred             ---CCCEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         ++|++||+||....         ...+.++..+++|+.++.++++++...= .-.++|++||.....+..       
T Consensus        82 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~-------  154 (271)
T PRK06505         82 KWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMP-------  154 (271)
T ss_pred             HhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCC-------
Confidence               58999999997532         1145567889999999998887765321 125899999976432211       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....   .. .......
T Consensus       155 ---------------------~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~---~~-~~~~~~~  209 (271)
T PRK06505        155 ---------------------NYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI---GD-ARAIFSY  209 (271)
T ss_pred             ---------------------ccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccC---cc-hHHHHHH
Confidence                                 13679999999999998887 4   489999999999976532111   00 0011111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..+..+             ..-+...+|+++++++++....  ..| .+.+.++
T Consensus       210 ~~~~~p-------------~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG  250 (271)
T PRK06505        210 QQRNSP-------------LRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSG  250 (271)
T ss_pred             HhhcCC-------------ccccCCHHHHHHHHHHHhCccccccCceEEeecCC
Confidence            111100             1124568999999999986432  355 4455444

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.3e-15  Score=132.31  Aligned_cols=243  Identities=12%  Similarity=0.029  Sum_probs=146.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------C
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------G   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   79 (341)
                      ++.++|||| |.||+++++.|. .|++|++++| +.......  ...+......+.++++|+++++.+.++++      +
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADY-NEENLEAA--AKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeC-CHHHHHHH--HHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCC
Confidence            367899997 789999999996 7999999999 75432211  11221222368889999999988887764      5


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCC---CCCCCCC
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDS---IDETCYT  155 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~---~~E~~~~  155 (341)
                      +|++||+||....  ..+++..+++|+.++.++++++...- .-.++|++||.....+......  ....   ++..+..
T Consensus        77 id~li~nAG~~~~--~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~--~~~~~~~~~~~~~~  152 (275)
T PRK06940         77 VTGLVHTAGVSPS--QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAE--QERALATTPTEELL  152 (275)
T ss_pred             CCEEEECCCcCCc--hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchh--hhcccccccccccc
Confidence            8999999997532  34467899999999999999886541 0145677887764432100000  0000   1111000


Q ss_pred             CCCCCCccC-cchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccc
Q 019415          156 PPDHPLTCH-NEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQ  230 (341)
Q Consensus       156 ~~~~~~~~~-~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (341)
                      ......+.. ......|+.||...+.+.+.++    ..|+++..+.||.+..+.....  ...........+....    
T Consensus       153 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~----  226 (275)
T PRK06940        153 SLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDE--LNGPRGDGYRNMFAKS----  226 (275)
T ss_pred             ccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhh--hcCCchHHHHHHhhhC----
Confidence            000000000 0124689999999999888775    3489999999999976632111  0000000111111100    


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      +         ...+...+|+|+++.+++...  ...| .+.+.++
T Consensus       227 p---------~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg  262 (275)
T PRK06940        227 P---------AGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG  262 (275)
T ss_pred             C---------cccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence            0         223677899999999988643  2355 4444433

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.71  E-value=6e-16  Score=131.98  Aligned_cols=165  Identities=19%  Similarity=0.234  Sum_probs=122.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----CC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----GC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~   80 (341)
                      +++|+||||+|+||+++++.|++.|++|++++| +..+...   +...    .++.++.+|++|++++.++++     ++
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r-~~~~~~~---~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~i   72 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVR-GPQQDTA---LQAL----PGVHIEKLDMNDPASLDQLLQRLQGQRF   72 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeC-CCcchHH---HHhc----cccceEEcCCCCHHHHHHHHHHhhcCCC
Confidence            368999999999999999999999999999999 7654222   2222    257788999999988877765     58


Q ss_pred             CEEEEeccCCccc-------cchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHI-------DGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        81 d~Vi~~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      |+|||+||.....       ........++.|+.++..+++++...-  ....++++||.....+...            
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~------------  140 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD------------  140 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC------------
Confidence            9999999875321       134456778899999999988876431  1257888888532111000            


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                   ......|+.+|...+.+++.++ +   .++++..++||.+-.+
T Consensus       141 -------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        141 -------------GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             -------------CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence                         0123579999999999999886 3   3799999999999655

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.71  E-value=3.4e-15  Score=130.06  Aligned_cols=217  Identities=15%  Similarity=0.120  Sum_probs=146.1

Q ss_pred             CCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      +++.+|||||+  +-||.++++.|+++|++|++.+| +....+..+.+...  . ....++++|++|++++.++++    
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r-~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYL-NDKARPYVEPLAEE--L-DAPIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHHHHh--h-ccceEEecCcCCHHHHHHHHHHHHH
Confidence            45789999998  59999999999999999999888 75432333333221  1 235678999999988877654    


Q ss_pred             ---CCCEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         +.|++||+||....         ...+.++..+++|+.++..+++++...- .-.++|++||.....+.        
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~--------  156 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVV--------  156 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCC--------
Confidence               57999999996431         1134567899999999999988775431 12589999986532211        


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                          .....|+.+|...+.+.+.++ +   .|+++..+.||.+-.+.....   .. .......
T Consensus       157 --------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~---~~-~~~~~~~  212 (258)
T PRK07533        157 --------------------ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI---DD-FDALLED  212 (258)
T ss_pred             --------------------ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc---CC-cHHHHHH
Confidence                                114679999999999988877 3   489999999999865432111   00 0111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEe
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCT  270 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~  270 (341)
                      .....   +          ...+...+|++.++.+++...  ...| .+.+.
T Consensus       213 ~~~~~---p----------~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vd  251 (258)
T PRK07533        213 AAERA---P----------LRRLVDIDDVGAVAAFLASDAARRLTGNTLYID  251 (258)
T ss_pred             HHhcC---C----------cCCCCCHHHHHHHHHHHhChhhccccCcEEeeC
Confidence            11110   0          223667899999999998753  2455 33443

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2.4e-15  Score=129.65  Aligned_cols=185  Identities=13%  Similarity=0.046  Sum_probs=126.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +++++||||+|.||+++++.|++.|++|++++| +...  .....  . .  ....++.+|+++.+.+.+.+.++|++||
T Consensus        14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r-~~~~--~~~~~--~-~--~~~~~~~~D~~~~~~~~~~~~~iDilVn   85 (245)
T PRK12367         14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTH-SKIN--NSESN--D-E--SPNEWIKWECGKEESLDKQLASLDVLIL   85 (245)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEEC-Cchh--hhhhh--c-c--CCCeEEEeeCCCHHHHHHhcCCCCEEEE
Confidence            478999999999999999999999999999999 6522  11111  1 1  1235788999999999999999999999


Q ss_pred             eccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhcC------CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCC
Q 019415           86 VATPLQHID--GYLYKNVVEACVGAAKKIASFCVKSG------TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPP  157 (341)
Q Consensus        86 ~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (341)
                      +||......  .+.++..+++|+.++.++++++...-      +-..++..||.+...+                     
T Consensus        86 nAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~---------------------  144 (245)
T PRK12367         86 NHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP---------------------  144 (245)
T ss_pred             CCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC---------------------
Confidence            999743322  45567889999999999999875431      0123444444432211                     


Q ss_pred             CCCCccCcchhhhHHHhHHHHHHHH---Hhh----ccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccc
Q 019415          158 DHPLTCHNEYLRVYIESKMKSEKEL---LSY----GSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQ  230 (341)
Q Consensus       158 ~~~~~~~~~~~~~Y~~sK~~~E~~~---~~~----~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (341)
                              .....|+.||...+.+.   +++    ...++.+..+.|+.+..+.   .                      
T Consensus       145 --------~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~---~----------------------  191 (245)
T PRK12367        145 --------ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSEL---N----------------------  191 (245)
T ss_pred             --------CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCccccc---C----------------------
Confidence                    01356999999975332   222    1347888888877652210   0                      


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                                ....+..+|+|+.++.++.+..
T Consensus       192 ----------~~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        192 ----------PIGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             ----------ccCCCCHHHHHHHHHHHHhcCC
Confidence                      0114568999999999987543

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.8e-15  Score=128.83  Aligned_cols=156  Identities=17%  Similarity=0.117  Sum_probs=119.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----CCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----GCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~   82 (341)
                      ||++||||+|.||+++++.|+++|++|++++| +.++   .+.+...    .+++++++|+++++++.++++    ++|+
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r-~~~~---~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~id~   72 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGA-RRDD---LEVAAKE----LDVDAIVCDNTDPASLEEARGLFPHHLDT   72 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHh----ccCcEEecCCCCHHHHHHHHHHHhhcCcE
Confidence            57999999999999999999999999999999 6532   2222111    135688999999998888775    5899


Q ss_pred             EEEeccCCc----c-----c-cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQ----H-----I-DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        83 Vi~~a~~~~----~-----~-~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      +||+|+...    .     . ..+.++..+++|+.++..+++++...- .-.++|++||..  .   .            
T Consensus        73 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~--~---~------------  135 (223)
T PRK05884         73 IVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN--P---P------------  135 (223)
T ss_pred             EEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC--C---C------------
Confidence            999997421    1     0 134567889999999999999886531 126899999864  1   0            


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeC
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAG  202 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G  202 (341)
                                     ....|+.+|...+.+.+.++ +   .|+++..+.||.+..
T Consensus       136 ---------------~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t  175 (223)
T PRK05884        136 ---------------AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQ  175 (223)
T ss_pred             ---------------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCc
Confidence                           13579999999999998887 3   489999999998853

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.70  E-value=3.4e-15  Score=140.45  Aligned_cols=164  Identities=17%  Similarity=0.141  Sum_probs=124.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||.++++.|++.|++|++++| .... +....+...-    +..++.+|+++++.++++++      
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~-~~~~-~~l~~~~~~~----~~~~~~~Dv~~~~~~~~~~~~~~~~~  282 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDV-PAAG-EALAAVANRV----GGTALALDITAPDAPARIAEHLAERH  282 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-CccH-HHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999999888 4332 2222222211    34578899999988777665      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC---CcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG---TVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       ++|+|||+|+......     .+.++..+++|+.++.++.+++....   .-.+||++||...+.+...          
T Consensus       283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~----------  352 (450)
T PRK08261        283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG----------  352 (450)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC----------
Confidence             5899999999764321     34567889999999999999987643   1268999999875543221          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAG  202 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G  202 (341)
                                        ...|+.+|...+.+++.++    ..|+++..+.||.+-.
T Consensus       353 ------------------~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t  391 (450)
T PRK08261        353 ------------------QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIET  391 (450)
T ss_pred             ------------------ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcc
Confidence                              4679999998888887775    3489999999998743

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.70  E-value=5.6e-16  Score=132.74  Aligned_cols=170  Identities=16%  Similarity=0.165  Sum_probs=128.4

Q ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHh---
Q 019415            2 DHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAI---   77 (341)
Q Consensus         2 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---   77 (341)
                      +...+|.|+||||+.-||.+++..|+++|.+++.+.| +.++.++. +.++..-... +++++++|++|.++..+.+   
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar-~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVAR-RARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeeh-hhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHH
Confidence            3345789999999999999999999999999888888 77776666 5555432222 7999999999998888664   


Q ss_pred             ----cCCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           78 ----QGCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        78 ----~~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                          .+.|+.||.||......     ..+....+++|+.|+..+.+++    ++.+ -.++|.+||.+...+.+.     
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~-----  159 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPF-----  159 (282)
T ss_pred             HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCc-----
Confidence                37999999999876432     4445568999999988887776    4444 579999999875543222     


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC---CceEE-EEecCceeC
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS---GLEVV-ALALGVVAG  202 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~---~~~~~-vlRp~~v~G  202 (341)
                                             ...|..||.+.+.+...+. +.   +..+. .+-||.|=-
T Consensus       160 -----------------------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~T  199 (282)
T KOG1205|consen  160 -----------------------RSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIET  199 (282)
T ss_pred             -----------------------ccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceee
Confidence                                   3489999999999998887 43   22222 577887743

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.70  E-value=3e-15  Score=134.13  Aligned_cols=196  Identities=17%  Similarity=0.126  Sum_probs=136.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCC--hHHH---HHHhcC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYD--PDTF---ENAIQG   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~--~~~~---~~~~~~   79 (341)
                      ++.++||||+|.||++++++|+++|++|++++| +.+..... +.+.... ....+..+.+|+++  .+.+   .+.+.+
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R-~~~~l~~~~~~l~~~~-~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVAR-NPDKLKDVSDSIQSKY-SKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEEC-CHHHHHHHHHHHHHHC-CCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999 76543222 1121110 01357788899975  2333   333444


Q ss_pred             --CCEEEEeccCCccc-----c--chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           80 --CDFVFHVATPLQHI-----D--GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        80 --~d~Vi~~a~~~~~~-----~--~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        +|++||+||.....     .  .+..+..+++|+.++..+.+++.    +.+ ..++|++||..+......       
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~-------  202 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSD-------  202 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCC-------
Confidence              55999999975321     1  34456789999999999888864    344 579999999875331100       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         .....|+.||...+.+.+.++ +   .|++++.+.||.|-.+.....              
T Consensus       203 -------------------p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~--------------  249 (320)
T PLN02780        203 -------------------PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR--------------  249 (320)
T ss_pred             -------------------ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc--------------
Confidence                               114789999999999998887 4   389999999999955421100              


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                       +.               .......+++|+.++..+..
T Consensus       250 -~~---------------~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        250 -RS---------------SFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             -CC---------------CCCCCCHHHHHHHHHHHhCC
Confidence             00               11134689999999998864

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=3.5e-15  Score=130.94  Aligned_cols=219  Identities=13%  Similarity=0.090  Sum_probs=146.1

Q ss_pred             CCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|.+|||||+  +-||.++++.|++.|++|++..| +.......+.+...  .... .++++|++|++++.++++    
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r-~~~~~~~~~~~~~~--~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYL-NEALKKRVEPIAQE--LGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEec-CHHHHHHHHHHHHh--cCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            36899999997  79999999999999999999888 74322233333221  1123 578999999988777664    


Q ss_pred             ---CCCEEEEeccCCcc-------cc--chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQH-------ID--GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~-------~~--~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         ++|++||+||....       ..  .+.++..+++|+.++..+.+++...- .-.++|++||.+...+..       
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~-------  152 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVP-------  152 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCC-------
Confidence               57999999997431       11  45567899999999999988776431 125899999975332111       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...+.+.+.++ +   .|+++..+.||.+..+.....   +.. ......
T Consensus       153 ---------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~---~~~-~~~~~~  207 (274)
T PRK08415        153 ---------------------HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI---GDF-RMILKW  207 (274)
T ss_pred             ---------------------cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc---chh-hHHhhh
Confidence                                 13679999999999999887 4   489999999999866421110   000 000000


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      . ....   +         ..-+...+|++.++.+++...  ...| ++.+.++
T Consensus       208 ~-~~~~---p---------l~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG  248 (274)
T PRK08415        208 N-EINA---P---------LKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG  248 (274)
T ss_pred             h-hhhC---c---------hhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCc
Confidence            0 0000   0         122567899999999998743  2455 4444433

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=7.6e-15  Score=127.99  Aligned_cols=219  Identities=11%  Similarity=0.038  Sum_probs=145.2

Q ss_pred             CCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      +++.++||||++  -||.++++.|++.|++|++..| +....+..+.+....   ....++++|++|+++++++++    
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r-~~~~~~~~~~l~~~~---g~~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQ-SEVLEKRVKPLAEEI---GCNFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeC-chHHHHHHHHHHHhc---CCceEEEccCCCHHHHHHHHHHHHH
Confidence            357899999997  7999999999999999998888 632222233332211   123467899999988877764    


Q ss_pred             ---CCCEEEEeccCCcc-------c--cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQH-------I--DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~-------~--~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         ++|++||+|+....       .  ..+.++..+++|+.+...+++++...- .-.++|++||.....+..       
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~-------  155 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP-------  155 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC-------
Confidence               48999999986431       1  144567889999999999988764321 125899999976432111       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...+.+.+.++ +   +|+++..+.||.+-.+.....   +. .......
T Consensus       156 ---------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~---~~-~~~~~~~  210 (260)
T PRK06603        156 ---------------------NYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI---GD-FSTMLKS  210 (260)
T ss_pred             ---------------------cccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC---CC-cHHHHHH
Confidence                                 13679999999999998887 3   489999999999865421110   00 0111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .....+             ...+...+|+++++.+++...  ...| .+.+.++
T Consensus       211 ~~~~~p-------------~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        211 HAATAP-------------LKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             HHhcCC-------------cCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence            111100             222567899999999999743  2355 4445433

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.68  E-value=8.4e-15  Score=133.76  Aligned_cols=187  Identities=16%  Similarity=0.128  Sum_probs=126.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+|+||||+|+||+++++.|+++|++|++++| +.....  ....   .....+..+.+|++|++.+.+.+.++|++|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r-~~~~l~--~~~~---~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLI  250 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTS-NSDKIT--LEIN---GEDLPVKTLHWQVGQEAALAELLEKVDILI  250 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHH--HHHh---hcCCCeEEEEeeCCCHHHHHHHhCCCCEEE
Confidence            4579999999999999999999999999999998 653311  1111   111246788999999999999999999999


Q ss_pred             EeccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhc----CC---cCEEEEecccccccCCCCCCCCCCCCCCCCCCCC
Q 019415           85 HVATPLQHID--GYLYKNVVEACVGAAKKIASFCVKS----GT---VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYT  155 (341)
Q Consensus        85 ~~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~----~~---~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~  155 (341)
                      |+||......  .+..+..+++|+.++.++++++...    +.   ...+|++|++. ..+                   
T Consensus       251 nnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~~-------------------  310 (406)
T PRK07424        251 INHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-VNP-------------------  310 (406)
T ss_pred             ECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-ccC-------------------
Confidence            9998754322  3445688999999999999987532    20   12345555422 110                   


Q ss_pred             CCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccc
Q 019415          156 PPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRD  234 (341)
Q Consensus       156 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (341)
                                .....|+.||...+.+..... +.+..+..+.|+.+    ....                .         
T Consensus       311 ----------~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~----~t~~----------------~---------  351 (406)
T PRK07424        311 ----------AFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPF----KSNL----------------N---------  351 (406)
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCC----cCCC----------------C---------
Confidence                      012569999999988653222 33444444444332    1110                0         


Q ss_pred             hhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          235 TEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       235 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                            ....+..+|+|+.++.++++..
T Consensus       352 ------~~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        352 ------PIGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             ------cCCCCCHHHHHHHHHHHHHCCC
Confidence                  1124678999999999997643

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.68  E-value=2e-15  Score=131.42  Aligned_cols=166  Identities=17%  Similarity=0.204  Sum_probs=120.7

Q ss_pred             EEEEecCcchHHHHHHHHHHH----CCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhcC---
Q 019415            8 KVCVTGGEGFVGSWLIKKLLD----KGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQG---   79 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---   79 (341)
                      .+|||||+|.||.+++++|++    .|++|+++.| +....... +.+... .....+.++.+|++++++++++++.   
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~   79 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSAR-NDEALRQLKAEIGAE-RSGLRVVRVSLDLGAEAGLEQLLKALRE   79 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEc-CHHHHHHHHHHHHhc-CCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence            589999999999999999997    7999999999 75432222 112211 0123688899999999888776642   


Q ss_pred             --------CCEEEEeccCCccc--------cchhHhHhhhhhhhHHHHHHHHHHhc-----CCcCEEEEecccccccCCC
Q 019415           80 --------CDFVFHVATPLQHI--------DGYLYKNVVEACVGAAKKIASFCVKS-----GTVKRLIYTASVLCASPLK  138 (341)
Q Consensus        80 --------~d~Vi~~a~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~~I~~Ss~~~~~~~~  138 (341)
                              .|++||+||.....        ..+.++..+++|+.++..+.+++...     +.-.++|++||.....+..
T Consensus        80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~  159 (256)
T TIGR01500        80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK  159 (256)
T ss_pred             ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC
Confidence                    25999999964321        12345688999999988887766433     1125899999986443221


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          139 EDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                                  ....|+.+|...+.+.+.++ +   .|+++..+.||.+-.+
T Consensus       160 ----------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~  200 (256)
T TIGR01500       160 ----------------------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD  200 (256)
T ss_pred             ----------------------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence                                        14679999999999999876 3   4899999999998554

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=1e-14  Score=127.96  Aligned_cols=218  Identities=12%  Similarity=0.044  Sum_probs=146.1

Q ss_pred             CcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            6 NFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         6 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++|||||+  +-||.++++.|++.|++|++..| +....+..+.+...   ......+++|++++++++++++     
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r-~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQ-GDALKKRVEPLAAE---LGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC-chHHHHHHHHHHHh---cCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            4689999997  89999999999999999998877 53322333333221   1235678999999988887764     


Q ss_pred             --CCCEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        ++|++||+||....         ...+.++..+++|+.++..+++++...- +-.++|++||.....+.         
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~---------  156 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM---------  156 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC---------
Confidence              48999999997531         1144567899999999999998876531 12689999986532211         


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         .....|+.||...+.+.+.++ +   +|+++..+.||.+..+.....   +. ...... .
T Consensus       157 -------------------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~---~~-~~~~~~-~  212 (272)
T PRK08159        157 -------------------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI---GD-FRYILK-W  212 (272)
T ss_pred             -------------------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC---Cc-chHHHH-H
Confidence                               114679999999999998886 3   489999999999865421110   00 000000 0


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ....  .+          ...+...+|+|+++++++....  ..| ++.+.++
T Consensus       213 ~~~~--~p----------~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        213 NEYN--AP----------LRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             HHhC--Cc----------ccccCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence            0000  00          1225678999999999997532  356 4445444

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.68  E-value=1.6e-14  Score=125.59  Aligned_cols=220  Identities=11%  Similarity=-0.034  Sum_probs=144.5

Q ss_pred             CCCcEEEEecC--cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            4 KSNFKVCVTGG--EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         4 ~~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      .++++++||||  ++-||.++++.|++.|++|++++| +... ...+.+...  ....+.++++|++++++++++++   
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r-~~~~-~~~~~~~~~--~~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGF-GRAL-RLTERIAKR--LPEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecC-ccch-hHHHHHHHh--cCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            35689999999  899999999999999999999888 5321 222222221  11257789999999988777654   


Q ss_pred             ----CCCEEEEeccCCcc-------cc--chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQH-------ID--GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~-------~~--~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                          ++|++||+||....       ..  .+.++..+++|+.++..+.+++...- .-.++|++|+... .+.       
T Consensus        81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-~~~-------  152 (256)
T PRK07889         81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-VAW-------  152 (256)
T ss_pred             HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-ccC-------
Confidence                58999999997531       11  34456679999999998887765431 1257888876431 100       


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                           .....|+.||...+.+.+.++ +   .|+++..+.||.+-.+.....   +. ......
T Consensus       153 ---------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~---~~-~~~~~~  207 (256)
T PRK07889        153 ---------------------PAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI---PG-FELLEE  207 (256)
T ss_pred             ---------------------CccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc---cC-cHHHHH
Confidence                                 113569999999999988876 3   489999999999966532111   00 011111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .+....+   .         .+.+...+|+|+++..++....  ..| ++.+.++
T Consensus       208 ~~~~~~p---~---------~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        208 GWDERAP---L---------GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHhcCc---c---------ccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence            1111100   0         2236779999999999987532  355 4445433

>PRK05599 hypothetical protein; Provisional

Probab=99.66  E-value=1.7e-14  Score=124.66  Aligned_cols=202  Identities=14%  Similarity=0.090  Sum_probs=136.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      |.+|||||++-||.++++.|+ +|++|++++| +..+.... +.+...  ....+.++.+|+.|++.++++++       
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAAR-RPEAAQGLASDLRQR--GATSVHVLSFDAQDLDTHRELVKQTQELAG   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeC-CHHHHHHHHHHHHhc--cCCceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999 5999999999 75432221 112211  11247899999999987776653       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      +.|++||+||......     .....+...+|+.+...++.+    +.+.++-.++|++||.....+..           
T Consensus        77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~-----------  145 (246)
T PRK05599         77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR-----------  145 (246)
T ss_pred             CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc-----------
Confidence            5899999999754321     222335567788777765544    33332136899999976433211           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       ....|+.+|...+.+.+.++ +   .|+++..+.||.+..+.....                 
T Consensus       146 -----------------~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~-----------------  191 (246)
T PRK05599        146 -----------------ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM-----------------  191 (246)
T ss_pred             -----------------CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC-----------------
Confidence                             13579999999988888876 3   489999999999865421110                 


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEe
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCT  270 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~  270 (341)
                      .+    .        .. ....+|+|++++.++.+......+.+.
T Consensus       192 ~~----~--------~~-~~~pe~~a~~~~~~~~~~~~~~~~~~~  223 (246)
T PRK05599        192 KP----A--------PM-SVYPRDVAAAVVSAITSSKRSTTLWIP  223 (246)
T ss_pred             CC----C--------CC-CCCHHHHHHHHHHHHhcCCCCceEEeC
Confidence            00    0        00 135799999999999876543454444

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.66  E-value=2.9e-14  Score=127.71  Aligned_cols=191  Identities=16%  Similarity=0.103  Sum_probs=124.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++||||++.||.++++.|+++| ++|++++| +.......  ...+......+.++.+|+++.++++++++      
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r-~~~~~~~~--~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACR-DFLKAEQA--AKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeC-CHHHHHHH--HHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999 99999999 75432221  11221122467889999999987776653      


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHH----hcC-CcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCV----KSG-TVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ++|++||+||.....      ..+.++..+++|+.++..++.++.    +.+ ...++|++||.....+.....   ..
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~---~~  156 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGN---VP  156 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCc---CC
Confidence             589999999974321      134567889999999888866653    332 136999999987443210000   00


Q ss_pred             CCCCCCCCCC----CC----CCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceEEEEecCceeC
Q 019415          147 DSIDETCYTP----PD----HPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEVVALALGVVAG  202 (341)
Q Consensus       147 ~~~~E~~~~~----~~----~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~~vlRp~~v~G  202 (341)
                      .+.+..+...    ..    ........+...|+.||.+...+.+.++ +    .|+.++.++||.|..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  225 (314)
T TIGR01289       157 PKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD  225 (314)
T ss_pred             CcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence            0000000000    00    0000011345789999999887777765 2    379999999999953

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.65  E-value=1.9e-14  Score=137.99  Aligned_cols=166  Identities=19%  Similarity=0.143  Sum_probs=126.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||++.||.++++.|+++|++|+++.| +......  ....+   ...+.++.+|++++++++++++      
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~--~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR-NVERARE--RADSL---GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHH--HHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999 6543221  11111   2357789999999988877764      


Q ss_pred             -CCCEEEEeccCCcc-------ccchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQH-------IDGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ++|++||+||....       ...+.++..+++|+.++..+++++...    +.-.++|++||.....+...       
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~-------  150 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK-------  150 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC-------
Confidence             48999999987321       114556789999999999998887653    21138999999875443211       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCC
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDT  204 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~  204 (341)
                                           ...|+.+|...+.+.+.++ +   .+++++.++||.+..+.
T Consensus       151 ---------------------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~  191 (520)
T PRK06484        151 ---------------------RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM  191 (520)
T ss_pred             ---------------------CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence                                 3679999999999988876 4   38999999999886553

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.65  E-value=4.6e-14  Score=121.14  Aligned_cols=198  Identities=16%  Similarity=0.209  Sum_probs=135.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh---cCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI---QGCD   81 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~d   81 (341)
                      |+|+||||+|+||++++++|+++|  ..|....| +....        .  ....++++++|+++++.++++.   .++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~-~~~~~--------~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id   69 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYR-HHKPD--------F--QHDNVQWHALDVTDEAEIKQLSEQFTQLD   69 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEcc-CCccc--------c--ccCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence            689999999999999999999985  56665566 43220        1  1247889999999988776654   4789


Q ss_pred             EEEEeccCCccc-----------cchhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHI-----------DGYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        82 ~Vi~~a~~~~~~-----------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                      +|||+||.....           ..+.+...+++|+.++..+.+.+...   ....+++++||.....   .        
T Consensus        70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~---~--------  138 (235)
T PRK09009         70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSI---S--------  138 (235)
T ss_pred             EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccc---c--------
Confidence            999999976421           12334578899999998887776543   1146899998743111   0        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                         +..           ......|+.+|...+.+++.++ +     .++++..+.||.+..+.....             
T Consensus       139 ---~~~-----------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-------------  191 (235)
T PRK09009        139 ---DNR-----------LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-------------  191 (235)
T ss_pred             ---cCC-----------CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-------------
Confidence               000           0123589999999999998877 3     378999999999866532110             


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceE
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRF  267 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~  267 (341)
                       ... .     .       ...++..+|+++++..++....  ..|.+
T Consensus       192 -~~~-~-----~-------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~  225 (235)
T PRK09009        192 -QQN-V-----P-------KGKLFTPEYVAQCLLGIIANATPAQSGSF  225 (235)
T ss_pred             -hhc-c-----c-------cCCCCCHHHHHHHHHHHHHcCChhhCCcE
Confidence             000 0     0       2336789999999999997643  35543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.64  E-value=8.5e-15  Score=118.80  Aligned_cols=149  Identities=19%  Similarity=0.233  Sum_probs=116.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      |.+|||||+|-||.+++++|+++| +.|+++.| + .+.+..+.+ ..++.....+.++++|++++++++.+++      
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r-~-~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSR-S-EDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEES-S-CHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeee-c-cccccccccccccccccccccccccccccccccccccccccccc
Confidence            579999999999999999999995 67888888 6 111222222 2222223689999999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                       ..|++||+|+......     .+.++..++.|+.+...+.+++...+ -.++|++||.....+...             
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~-------------  144 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRGSPG-------------  144 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSSSTT-------------
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccCCCC-------------
Confidence             5899999999877433     45567899999999999999998855 689999999886553322             


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG  186 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  186 (341)
                                     ...|+.+|...+.+++.++
T Consensus       145 ---------------~~~Y~askaal~~~~~~la  163 (167)
T PF00106_consen  145 ---------------MSAYSASKAALRGLTQSLA  163 (167)
T ss_dssp             ---------------BHHHHHHHHHHHHHHHHHH
T ss_pred             ---------------ChhHHHHHHHHHHHHHHHH
Confidence                           5799999999999998876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.63  E-value=3.5e-15  Score=120.87  Aligned_cols=219  Identities=21%  Similarity=0.193  Sum_probs=159.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEec
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVA   87 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~a   87 (341)
                      +.|+.|+.||+|+++++...+.++.|-.+.| +..+    +.++   .....+.++.+|.....-+...+.++..++-++
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilse-n~~k----~~l~---sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~  125 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSE-NENK----QTLS---SWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMM  125 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeec-ccCc----chhh---CCCcccchhhccccccCcchhhhcCCcccHHHh
Confidence            6889999999999999999999999999999 6543    1121   233578889999887776777888899999998


Q ss_pred             cCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcch
Q 019415           88 TPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEY  167 (341)
Q Consensus        88 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  167 (341)
                      +-.+..     ..+...|-....+.++++.+.| +++|+|+|... ++-. +                          .-
T Consensus       126 ggfgn~-----~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d-~~~~-~--------------------------~i  171 (283)
T KOG4288|consen  126 GGFGNI-----ILMDRINGTANINAVKAAAKAG-VPRFVYISAHD-FGLP-P--------------------------LI  171 (283)
T ss_pred             cCccch-----HHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhh-cCCC-C--------------------------cc
Confidence            876654     2777889999999999999999 99999999875 3211 1                          11


Q ss_pred             hhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCC-----CCCCchhhhhHhhHhc---Cccccccccchhhcc
Q 019415          168 LRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPY-----SSTPVSVIGGLCQLTN---NEYVYQTLRDTEEIL  239 (341)
Q Consensus       168 ~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  239 (341)
                      ...|..+|+++|..+....  +++-++||||.+||...-..     +....-+....+.+.+   ..+..++        
T Consensus       172 ~rGY~~gKR~AE~Ell~~~--~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~--------  241 (283)
T KOG4288|consen  172 PRGYIEGKREAEAELLKKF--RFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGP--------  241 (283)
T ss_pred             chhhhccchHHHHHHHHhc--CCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccccc--------
Confidence            3579999999999988754  58999999999999843322     0011112222333311   1122222        


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHH
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQ  285 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~  285 (341)
                      -..+.+.+++||.+.+.+++++...|+       +++.||.++-++
T Consensus       242 l~~ppvnve~VA~aal~ai~dp~f~Gv-------v~i~eI~~~a~k  280 (283)
T KOG4288|consen  242 LLAPPVNVESVALAALKAIEDPDFKGV-------VTIEEIKKAAHK  280 (283)
T ss_pred             ccCCCcCHHHHHHHHHHhccCCCcCce-------eeHHHHHHHHHH
Confidence            278899999999999999999876554       455666655443

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.62  E-value=4.1e-14  Score=125.96  Aligned_cols=173  Identities=13%  Similarity=0.066  Sum_probs=121.3

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-------hhhhhHh-hhCCCCCCceEEEecCCCChHHHHH
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-------KSKVDLL-KSLPGAETRLIFFEAEIYDPDTFEN   75 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~   75 (341)
                      .+++.+|||||++.||.++++.|++.|++|++++| +...       ....+.+ ..+......+.++++|+.+++++++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGR-STRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEec-ccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            35689999999999999999999999999999999 7431       1122211 1112222357789999999988877


Q ss_pred             Hhc-------CCCEEEEec-cCCc-----cc--c--chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccc
Q 019415           76 AIQ-------GCDFVFHVA-TPLQ-----HI--D--GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCA  134 (341)
Q Consensus        76 ~~~-------~~d~Vi~~a-~~~~-----~~--~--~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~  134 (341)
                      +++       ++|++||+| +...     ..  .  .+.+.+.+++|+.+...++.++..    .+ -.++|++||....
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~  163 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAE  163 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCcccc
Confidence            664       589999999 6321     11  1  234557788899888888776643    22 3689999996432


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          135 SPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       135 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                      .....                         ......|+.+|.....+.+.++ +   .|+++..+.||.+-.+
T Consensus       164 ~~~~~-------------------------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~  211 (305)
T PRK08303        164 YNATH-------------------------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE  211 (305)
T ss_pred             ccCcC-------------------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence            21100                         0113569999999999988876 3   3899999999988544

>PLN00015 protochlorophyllide reductase

Probab=99.59  E-value=1.6e-13  Score=122.70  Aligned_cols=187  Identities=16%  Similarity=0.140  Sum_probs=119.3

Q ss_pred             EEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------CCC
Q 019415           10 CVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------GCD   81 (341)
Q Consensus        10 lI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   81 (341)
                      |||||++.||.+++++|+++| ++|++.+| +......  ....+......+.++++|+.+.+++.++++       ++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r-~~~~~~~--~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD   77 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACR-DFLKAER--AAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD   77 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeC-CHHHHHH--HHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence            699999999999999999999 99999999 6543221  112222122468889999999988776654       479


Q ss_pred             EEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHh----cCC-cCEEEEecccccccCCC-CCC--CCCCC-
Q 019415           82 FVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVK----SGT-VKRLIYTASVLCASPLK-EDG--SAGYK-  146 (341)
Q Consensus        82 ~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~-~~~~I~~Ss~~~~~~~~-~~~--~~~~~-  146 (341)
                      ++||+||.....      ..+.++..+++|+.++..+++++..    .+. ..++|++||.....+.. ...  ..... 
T Consensus        78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            999999975321      1345678999999998888666433    221 26999999986432110 000  00000 


Q ss_pred             -----CCCCCCC-CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceEEEEecCceeC
Q 019415          147 -----DSIDETC-YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEVVALALGVVAG  202 (341)
Q Consensus       147 -----~~~~E~~-~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~~vlRp~~v~G  202 (341)
                           .+..+.. ....+..   ...+...|+.||.+.+...+.++ +    .|+.++.+.||.|..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~---~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~  221 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGG---EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT  221 (308)
T ss_pred             hhhhhcccCCccchhhcccc---CCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence                 0000000 0000000   01245789999999776666655 2    379999999999954

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.59  E-value=3.9e-13  Score=106.36  Aligned_cols=216  Identities=15%  Similarity=0.111  Sum_probs=148.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      .+.++||||+.-||+++++.|.+.|++|.+.++ +...  .......+++. .+...+.+|+.++.++...++       
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl-~~~~--A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g   89 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADL-DSAA--AEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLG   89 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeec-chhh--HHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcC
Confidence            367999999999999999999999999999888 5542  23333444432 356678999999877776554       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----C-CcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----G-TVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      .+++++||||+.....     .+.++..+.+|+.++..+.+++.+.    + .--++|.+||.  ++--...+       
T Consensus        90 ~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSI--VGkiGN~G-------  160 (256)
T KOG1200|consen   90 TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSI--VGKIGNFG-------  160 (256)
T ss_pred             CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhh--hccccccc-------
Confidence            5899999999877543     7778899999999999888777554    2 12389999996  33222211       


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHH----HHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKM----KSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~----~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         .+-|+.+|.    ..-.+.++.+..++++.++-||+|-.|.....      -+.+...+.+
T Consensus       161 -------------------QtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m------p~~v~~ki~~  215 (256)
T KOG1200|consen  161 -------------------QTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM------PPKVLDKILG  215 (256)
T ss_pred             -------------------chhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc------CHHHHHHHHc
Confidence                               345666664    22334444445689999999999988865443      3445555544


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .-+             ...+=..+|+|..++.++...+  ..| .+-++++
T Consensus       216 ~iP-------------mgr~G~~EevA~~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  216 MIP-------------MGRLGEAEEVANLVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             cCC-------------ccccCCHHHHHHHHHHHhccccccccceeEEEecc
Confidence            321             2224458999999998885422  234 5555543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.57  E-value=1.1e-13  Score=113.74  Aligned_cols=162  Identities=19%  Similarity=0.198  Sum_probs=119.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHCC-CeEEEEecCC-CCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC------
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPN-LEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG------   79 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------   79 (341)
                      .+|||||+|-||..+++.|+++| .+|+++.| + .........+..+......++++.+|++|++.+.+++..      
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r-~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGR-SGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEES-SGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEecc-CCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence            58999999999999999999997 47899999 6 223233334444333345899999999999999998863      


Q ss_pred             -CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           80 -CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        80 -~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                       ++.|||+|+......     .+.++..+..-+.++.+|.++..... ++.||.+||.....|...              
T Consensus        81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~g--------------  145 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGPG--------------  145 (181)
T ss_dssp             -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-TT--------------
T ss_pred             CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCcc--------------
Confidence             588999999765422     44556778888999999999999887 999999999987775543              


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCc
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGV  199 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~  199 (341)
                                    ...|+.+-...+.+.+.....|.+++.|.-+.
T Consensus       146 --------------q~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~  177 (181)
T PF08659_consen  146 --------------QSAYAAANAFLDALARQRRSRGLPAVSINWGA  177 (181)
T ss_dssp             --------------BHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred             --------------hHhHHHHHHHHHHHHHHHHhCCCCEEEEEccc
Confidence                          57899999999988887666689988887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.57  E-value=9e-14  Score=108.15  Aligned_cols=158  Identities=18%  Similarity=0.231  Sum_probs=127.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++|..+|.||||-.|+.|++++++++  -.|+++.| +...         .+...+.+.....|....+.+...++++|+
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~R-R~~~---------d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV   86 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILR-RELP---------DPATDKVVAQVEVDFSKLSQLATNEQGPDV   86 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhcccceeEEEEEe-ccCC---------CccccceeeeEEechHHHHHHHhhhcCCce
Confidence            46889999999999999999999998  47999999 6321         133446788889999998999999999999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      .+.+-|.......  .+.++.+.--....++++|++.| ++.|+.+||.++ .+.                         
T Consensus        87 ~FcaLgTTRgkaG--adgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GA-d~s-------------------------  137 (238)
T KOG4039|consen   87 LFCALGTTRGKAG--ADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGA-DPS-------------------------  137 (238)
T ss_pred             EEEeecccccccc--cCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCC-Ccc-------------------------
Confidence            9999887776553  33666666677788999999999 999999999873 211                         


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPY  208 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~  208 (341)
                          -.-.|...|...|+-+.++. +   +++|+|||.+.|......
T Consensus       138 ----SrFlY~k~KGEvE~~v~eL~F~---~~~i~RPG~ll~~R~esr  177 (238)
T KOG4039|consen  138 ----SRFLYMKMKGEVERDVIELDFK---HIIILRPGPLLGERTESR  177 (238)
T ss_pred             ----cceeeeeccchhhhhhhhcccc---EEEEecCcceeccccccc
Confidence                13469999999999998775 4   899999999999876665

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.4e-13  Score=114.99  Aligned_cols=164  Identities=7%  Similarity=0.023  Sum_probs=118.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++++||||++-||.++++.|++.|++|+++.| +....... +.+..   ...++..+.+|+.+++.++++++     
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r-~~~~l~~~~~~i~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQ-DQSALKDTYEQCSA---LTDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 76442222 12222   22467788999999987776653     


Q ss_pred             ---CCCEEEEeccCCccc----c--chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI----D--GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~----~--~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         ++|++||+||.....    .  .+.+.+.++.|+.++..++.++    .+.++-..+|++||... .  .       
T Consensus        80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~-~--~-------  149 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD-H--Q-------  149 (227)
T ss_pred             hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC-C--C-------
Confidence               589999999743221    1  2344566777888777665443    33321368999998541 1  0       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                           ....|+.+|...+.+.+.++ +   +++++..+.||.+-.+
T Consensus       150 ---------------------~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        150 ---------------------DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             ---------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence                                 13579999999999988876 3   4899999999998665

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=1.8e-12  Score=110.36  Aligned_cols=197  Identities=13%  Similarity=0.077  Sum_probs=143.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++..||||||++-+|+.++.+++++|..+.+.+. +...... .+..+..    ..++...+|+++.+++.+..+     
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Di-n~~~~~etv~~~~~~----g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDI-NKQGNEETVKEIRKI----GEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEec-cccchHHHHHHHHhc----CceeEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999998888888 6654322 2222222    379999999999988877665     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||.||......     .+..+..+++|+.+.....++    +.+.+ -.++|-++|.....+...        
T Consensus       112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~g--------  182 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPAG--------  182 (300)
T ss_pred             cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCcc--------
Confidence              5899999999877654     444578899999887775554    45554 589999999876654332        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-------cCCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-------SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-------~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                          ...|..||.++.-..+.+.       ..|++.+.+-|+.+-...                
T Consensus       183 --------------------l~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm----------------  226 (300)
T KOG1201|consen  183 --------------------LADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM----------------  226 (300)
T ss_pred             --------------------chhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc----------------
Confidence                                5789999998766655553       127889999888773111                


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                        ..+..  +...       ..+.+..+.+|+.+..++....
T Consensus       227 --f~~~~--~~~~-------l~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  227 --FDGAT--PFPT-------LAPLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             --cCCCC--CCcc-------ccCCCCHHHHHHHHHHHHHcCC
Confidence              01111  1111       7788899999999999987654

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.54  E-value=4.5e-14  Score=109.61  Aligned_cols=210  Identities=17%  Similarity=0.144  Sum_probs=151.3

Q ss_pred             CCCC-CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC
Q 019415            1 MDHK-SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG   79 (341)
Q Consensus         1 M~~~-~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (341)
                      |+.. -++.|++||+.--||+.+++.|++.|.+|+++.| ++.+   ++.+-+  ....-++.+++|+.+-+.+.+++..
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR-~~a~---L~sLV~--e~p~~I~Pi~~Dls~wea~~~~l~~   74 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVAR-NEAN---LLSLVK--ETPSLIIPIVGDLSAWEALFKLLVP   74 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEec-CHHH---HHHHHh--hCCcceeeeEecccHHHHHHHhhcc
Confidence            5544 4789999999999999999999999999999999 6643   233322  1123488999999998888888764


Q ss_pred             ---CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           80 ---CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        80 ---~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                         .|..+|.||......     ..+++..+++|+.+..++.+...    ..+....++.+||.++.-+.          
T Consensus        75 v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~----------  144 (245)
T KOG1207|consen   75 VFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPL----------  144 (245)
T ss_pred             cCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccccc----------
Confidence               699999999755432     56678999999999988877732    23323469999998753322          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC---CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS---GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~---~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                        +.                .+.|..+|.+.+.+.+.++ +.   .+++..+.|..|.-.....+++-|.-...++..+ 
T Consensus       145 --~n----------------HtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~ri-  205 (245)
T KOG1207|consen  145 --DN----------------HTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRI-  205 (245)
T ss_pred             --CC----------------ceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhC-
Confidence              11                4789999999999999887 54   6899999999987765444422222111111111 


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                               .       .--|..|+.+++++..++...
T Consensus       206 ---------P-------l~rFaEV~eVVnA~lfLLSd~  227 (245)
T KOG1207|consen  206 ---------P-------LKRFAEVDEVVNAVLFLLSDN  227 (245)
T ss_pred             ---------c-------hhhhhHHHHHHhhheeeeecC
Confidence                     1       334888999999999988753

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.52  E-value=4.6e-12  Score=110.11  Aligned_cols=218  Identities=15%  Similarity=0.063  Sum_probs=146.5

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHh----
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAI----   77 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~----   77 (341)
                      ..++|.+|||||+.-||++++++|++.|.+|++..| +.+...... .+.........+..+.+|+.+.+..++++    
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGR-SEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999 765422221 11221111356899999999876555443    


Q ss_pred             ----cCCCEEEEeccCCcccc------chhHhHhhhhhhhH-HHHHHHHHHhc---CCcCEEEEecccccccCCCCCCCC
Q 019415           78 ----QGCDFVFHVATPLQHID------GYLYKNVVEACVGA-AKKIASFCVKS---GTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        78 ----~~~d~Vi~~a~~~~~~~------~~~~~~~~~~nv~~-~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                          .+.|++||.||......      .+.++.++++|+.| ...+..++..+   ..-..++++||...+.+...    
T Consensus        84 ~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~----  159 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPG----  159 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC----
Confidence                36999999999766431      66778999999994 66665555333   11467888888864332111    


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                            . ...|+.+|...+++.+.++ +   +|+++..+-||.|..+..... ........+.
T Consensus       160 ----------------------~-~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~-~~~~~~~~~~  215 (270)
T KOG0725|consen  160 ----------------------S-GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAG-LDDGEMEEFK  215 (270)
T ss_pred             ----------------------C-cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccc-cccchhhHHh
Confidence                                  1 1689999999999999987 3   499999999999988751111 0001112222


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                      .... .....+          .-.+...+|++.++..++..
T Consensus       216 ~~~~-~~~~~p----------~gr~g~~~eva~~~~fla~~  245 (270)
T KOG0725|consen  216 EATD-SKGAVP----------LGRVGTPEEVAEAAAFLASD  245 (270)
T ss_pred             hhhc-cccccc----------cCCccCHHHHHHhHHhhcCc
Confidence            2200 111111          22355689999999888765

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.51  E-value=1.3e-12  Score=112.64  Aligned_cols=208  Identities=17%  Similarity=0.121  Sum_probs=142.6

Q ss_pred             cCc--chHHHHHHHHHHHCCCeEEEEecCCCCch-hhhhHhhhCCCCCCceEEEecCCCChHHHHHHh--------cCCC
Q 019415           13 GGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDK-SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI--------QGCD   81 (341)
Q Consensus        13 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------~~~d   81 (341)
                      |++  +-||.++++.|++.|++|++.+| +.... ...+.+....    +..++++|+++++++++++        .++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~-~~~~~~~~~~~l~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD   75 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDR-NEEKLADALEELAKEY----GAEVIQCDLSDEESVEALFDEAVERFGGRID   75 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEES-SHHHHHHHHHHHHHHT----TSEEEESCTTSHHHHHHHHHHHHHHHCSSES
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHHHc----CCceEeecCcchHHHHHHHHHHHhhcCCCeE
Confidence            666  99999999999999999999999 66531 2233333321    2346999999998877774        4689


Q ss_pred             EEEEeccCCcc----cc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQH----ID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        82 ~Vi~~a~~~~~----~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      ++||+++....    ..     .+.++..++.|+.+...+++++...- .-.++|++||.....+.              
T Consensus        76 ~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~--------------  141 (241)
T PF13561_consen   76 ILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM--------------  141 (241)
T ss_dssp             EEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS--------------
T ss_pred             EEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC--------------
Confidence            99999987654    11     35567889999999999988874431 12589999998643321              


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----c-CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----S-SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~-~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                    .....|+.+|...+.+.+.++    . +|+++..|.||.+..+.....   . ....+........
T Consensus       142 --------------~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~---~-~~~~~~~~~~~~~  203 (241)
T PF13561_consen  142 --------------PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERI---P-GNEEFLEELKKRI  203 (241)
T ss_dssp             --------------TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH---H-THHHHHHHHHHHS
T ss_pred             --------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcc---c-cccchhhhhhhhh
Confidence                          114589999999999998876    4 689999999999965521100   0 0112222221111


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEe
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCT  270 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~  270 (341)
                      +             ...+...+|+|.++..++...  ...| ++.+.
T Consensus       204 p-------------l~r~~~~~evA~~v~fL~s~~a~~itG~~i~vD  237 (241)
T PF13561_consen  204 P-------------LGRLGTPEEVANAVLFLASDAASYITGQVIPVD  237 (241)
T ss_dssp             T-------------TSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEES
T ss_pred             c-------------cCCCcCHHHHHHHHHHHhCccccCccCCeEEEC
Confidence            0             333568999999999999754  3566 44443

...

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.49  E-value=1.3e-11  Score=109.19  Aligned_cols=210  Identities=12%  Similarity=0.053  Sum_probs=135.3

Q ss_pred             CCcEEEEecC--cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhH-hh--------hCCC--CCCceEEEecCC--CC
Q 019415            5 SNFKVCVTGG--EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDL-LK--------SLPG--AETRLIFFEAEI--YD   69 (341)
Q Consensus         5 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~--------~~~~--~~~~~~~~~~Dl--~~   69 (341)
                      ++|++|||||  +.-||.++++.|++.|.+|++ .| +....+.... +.        ..+.  .......+.+|+  .+
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GT-WVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-Ee-CcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            5789999999  799999999999999999988 67 6543322221 11        0110  011246788888  32


Q ss_pred             hH------------------HHHHHhc-------CCCEEEEeccCCc----c-c--cchhHhHhhhhhhhHHHHHHHHHH
Q 019415           70 PD------------------TFENAIQ-------GCDFVFHVATPLQ----H-I--DGYLYKNVVEACVGAAKKIASFCV  117 (341)
Q Consensus        70 ~~------------------~~~~~~~-------~~d~Vi~~a~~~~----~-~--~~~~~~~~~~~nv~~~~~l~~~~~  117 (341)
                      ++                  ++.++++       ++|++||+||...    . .  ..+.++..+++|+.++..+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            22                  4454443       5899999996432    1 1  155678899999999999988875


Q ss_pred             hcC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCce
Q 019415          118 KSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLE  191 (341)
Q Consensus       118 ~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~  191 (341)
                      ..- .-.++|++||.....+...                           ....|+.||...+.+.+.++ +    .|++
T Consensus       166 p~m~~~G~II~isS~a~~~~~p~---------------------------~~~~Y~asKaAl~~l~~~la~El~~~~gIr  218 (303)
T PLN02730        166 PIMNPGGASISLTYIASERIIPG---------------------------YGGGMSSAKAALESDTRVLAFEAGRKYKIR  218 (303)
T ss_pred             HHHhcCCEEEEEechhhcCCCCC---------------------------CchhhHHHHHHHHHHHHHHHHHhCcCCCeE
Confidence            541 0258999999764332111                           12469999999999998887 3    3799


Q ss_pred             EEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          192 VVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       192 ~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                      +..+-||.+-.+.....   +. ............    +         ...+...+|++.++++++..
T Consensus       219 Vn~V~PG~v~T~~~~~~---~~-~~~~~~~~~~~~----p---------l~r~~~peevA~~~~fLaS~  270 (303)
T PLN02730        219 VNTISAGPLGSRAAKAI---GF-IDDMIEYSYANA----P---------LQKELTADEVGNAAAFLASP  270 (303)
T ss_pred             EEEEeeCCccCchhhcc---cc-cHHHHHHHHhcC----C---------CCCCcCHHHHHHHHHHHhCc
Confidence            99999998866532110   00 011111111100    0         12246789999999999864

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.49  E-value=2.3e-12  Score=115.53  Aligned_cols=230  Identities=18%  Similarity=0.136  Sum_probs=140.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHhcC----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAIQG----   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~----   79 (341)
                      +.+.|||.||||.+|+-+++.|+++|+.|++++| +.........   ....+.....+..|...+ +.+..+...    
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VR-d~~~a~~~~~---~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~  153 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVR-DEQKAEDLLG---VFFVDLGLQNVEADVVTAIDILKKLVEAVPKG  153 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeecc-Chhhhhhhhc---ccccccccceeeeccccccchhhhhhhhcccc
Confidence            4579999999999999999999999999999999 7654333322   222233555566555553 333444433    


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDH  159 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (341)
                      ..+++-+++-.....  +...-+.+...|++|+++||+..| +++||++||.+..-....       .+...        
T Consensus       154 ~~~v~~~~ggrp~~e--d~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~~-------~~~~~--------  215 (411)
T KOG1203|consen  154 VVIVIKGAGGRPEEE--DIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQP-------PNILL--------  215 (411)
T ss_pred             ceeEEecccCCCCcc--cCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCCC-------chhhh--------
Confidence            345555555433321  112335677899999999999999 999999999763111000       00000        


Q ss_pred             CCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhc
Q 019415          160 PLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEI  238 (341)
Q Consensus       160 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  238 (341)
                             ....+..+|+.+|+.+.   +.|++.++||++...-......    . .  .   ..+.. ....+.      
T Consensus       216 -------~~~~~~~~k~~~e~~~~---~Sgl~ytiIR~g~~~~~~~~~~----~-~--~---~~~~~~~~~~~~------  269 (411)
T KOG1203|consen  216 -------LNGLVLKAKLKAEKFLQ---DSGLPYTIIRPGGLEQDTGGQR----E-V--V---VDDEKELLTVDG------  269 (411)
T ss_pred             -------hhhhhhHHHHhHHHHHH---hcCCCcEEEeccccccCCCCcc----e-e--c---ccCccccccccc------
Confidence                   02345588889998887   5689999999998766543322    0 0  0   00110 011110      


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCc--eEEEeccc----cCHHHHHHHHH
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSG--RFFCTNVF----VSSAEIASCLQ  284 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g--~~n~~~~~----~s~~e~~~~i~  284 (341)
                        .--.+.-.|+|+..+.++.+.....  +.+++...    -.+.++.+.+.
T Consensus       270 --~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~gpg~~~~~l~~~~~  319 (411)
T KOG1203|consen  270 --GAYSISRLDVAELVAKALLNEAATFKKVVELVLKPEGPGRPYKVLLELFP  319 (411)
T ss_pred             --cceeeehhhHHHHHHHHHhhhhhccceeEEeecCCCCCCccHHHHHhhcc
Confidence              1125667899999999998877665  33444432    34444444443

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.48  E-value=1.7e-12  Score=105.45  Aligned_cols=219  Identities=18%  Similarity=0.168  Sum_probs=148.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++++++||.|-||..++++|++.|-.+.++.. +.++......+....+ ...+.|+++|+++..+++++|+      
T Consensus         4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~-~~En~~a~akL~ai~p-~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDD-SEENPEAIAKLQAINP-SVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cCceEEEecCCchhhHHHHHHHHHcCchheeehh-hhhCHHHHHHHhccCC-CceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            5799999999999999999999999988888776 6666444444444321 2479999999999988888876      


Q ss_pred             -CCCEEEEeccCCccccchhHhHhhhhhhhHHHH----HHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKK----IASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~----l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                       ..|++||.||......   ++..+.+|+.|..+    .+.++.+..  .-.-+|.+||....+|..             
T Consensus        82 g~iDIlINgAGi~~dkd---~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p-------------  145 (261)
T KOG4169|consen   82 GTIDILINGAGILDDKD---WERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMP-------------  145 (261)
T ss_pred             CceEEEEcccccccchh---HHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccc-------------
Confidence             4899999999987443   67899999766554    555554442  345899999976544322             


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc------cCCceEEEEecCceeCCCCCCC---CCCCchhhhhHhhH
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG------SSGLEVVALALGVVAGDTNLPY---SSTPVSVIGGLCQL  222 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~------~~~~~~~vlRp~~v~G~~~~~~---~~~~~~~~~~~~~~  222 (341)
                                     ....|+.||.-.-.+.++++      +.|+++..+.||.+--.-....   ......-+.+...+
T Consensus       146 ---------------~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l  210 (261)
T KOG4169|consen  146 ---------------VFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEAL  210 (261)
T ss_pred             ---------------cchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHH
Confidence                           24689999986555555532      4599999999987632100000   00000111122222


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVF  273 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~  273 (341)
                      .                 ..+--...+++..++.+++.+.-+-+|.++.+.
T Consensus       211 ~-----------------~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  211 E-----------------RAPKQSPACCAINIVNAIEYPKNGAIWKVDSGS  244 (261)
T ss_pred             H-----------------HcccCCHHHHHHHHHHHHhhccCCcEEEEecCc
Confidence            1                 223344788999999999985544488877654

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.47  E-value=4e-12  Score=112.19  Aligned_cols=182  Identities=16%  Similarity=0.077  Sum_probs=131.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++.++|||||+-||.++++.|+.+|.+|+...| +..... ..+.+.. ......+.++++|+.+..++.+..+     
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R-~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACR-NEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999 874422 2233332 2334588999999999987776654     


Q ss_pred             --CCCEEEEeccCCcccc---chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID---GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~---~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ..|+.|+.||+.....   .+..+..+.+|..|...|.+.    ++... -.|+|++||...  +....-    +..-
T Consensus       112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~--~~~~~~----~~l~  184 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG--GGKIDL----KDLS  184 (314)
T ss_pred             CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc--cCccch----hhcc
Confidence              4799999999877655   455788999999888777655    45544 379999999863  111100    1111


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDT  204 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~  204 (341)
                      .|....         ......|+.||.+......++. +.  |+.+..+.||.+..+.
T Consensus       185 ~~~~~~---------~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  185 GEKAKL---------YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             chhccC---------ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence            221100         0112369999999988888887 32  7999999999998874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.44  E-value=4.7e-12  Score=101.30  Aligned_cols=163  Identities=19%  Similarity=0.211  Sum_probs=120.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      .+..||||||+.-||..|++++.+.|.+|++..| +..+   ++....   .-+.++...+|+.|.+...++.+      
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR-~e~~---L~e~~~---~~p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGR-NEER---LAEAKA---ENPEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecC-cHHH---HHHHHh---cCcchheeeecccchhhHHHHHHHHHhhC
Confidence            4678999999999999999999999999999999 7643   332222   12488899999999876655543      


Q ss_pred             -CCCEEEEeccCCcccc-------chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-------GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-------~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ..+++||+||+-....       .++.+..+..|+.++.++..+.    .++. -..+|.+||.-++.|...       
T Consensus        77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvPm~~-------  148 (245)
T COG3967          77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVPMAS-------  148 (245)
T ss_pred             CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCcccc-------
Confidence             4799999999755422       2223466888999988886665    4444 568999999875553322       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                           ...|..+|+..-.+-..+. +   .+++++-+-|+.|--+
T Consensus       149 ---------------------~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         149 ---------------------TPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             ---------------------cccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                                 3468888887776666665 2   3789999999998765

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.44  E-value=7.2e-12  Score=101.89  Aligned_cols=170  Identities=18%  Similarity=0.142  Sum_probs=120.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +.|+||||+--||-.|+++|++. |-++++..|.+++..  ...+....-.++++|+++.|+++.+++.++.+       
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a--~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA--ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh--hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            46999999999999999999987 567666555145543  22233222346799999999999887777654       


Q ss_pred             --CCCEEEEeccCCcccc------chhHhHhhhhhhhHHHHHHHHH----HhcC----------CcCEEEEecccccccC
Q 019415           79 --GCDFVFHVATPLQHID------GYLYKNVVEACVGAAKKIASFC----VKSG----------TVKRLIYTASVLCASP  136 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~------~~~~~~~~~~nv~~~~~l~~~~----~~~~----------~~~~~I~~Ss~~~~~~  136 (341)
                        +.|+.|++||......      ...+-+.+++|+.++..+.+++    ++..          +-..+|++||.+.--+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence              5799999999765433      3335678999988887766553    2322          1127899999863211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          137 LKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       137 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                      ..                         ...+..+|..||.+.-...+.++ +   .++-++.+.||+|--.
T Consensus       162 ~~-------------------------~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TD  207 (249)
T KOG1611|consen  162 GF-------------------------RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTD  207 (249)
T ss_pred             CC-------------------------CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcC
Confidence            11                         12346899999999999999987 4   3788888999999443

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.44  E-value=1e-11  Score=105.96  Aligned_cols=208  Identities=13%  Similarity=0.058  Sum_probs=145.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ..+|+||||+.-+|..++..+...|++|+++.| +......+...-.+.....++.+..+|+.|.+.....++       
T Consensus        33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar-~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~  111 (331)
T KOG1210|consen   33 RRHILITGGSSGLGLALALECKREGADVTITAR-SGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG  111 (331)
T ss_pred             cceEEEecCcchhhHHHHHHHHHccCceEEEec-cHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence            358999999999999999999999999999999 664433332222221222358899999999888887775       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-C---cCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-T---VKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~---~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      .+|.+|+|||..-...     .......+++|..++.+++.++.... .   ..++|.+||..+.++-..          
T Consensus       112 ~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~G----------  181 (331)
T KOG1210|consen  112 PIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYG----------  181 (331)
T ss_pred             CcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccc----------
Confidence            3799999999765543     44557889999999999988875442 1   238999999987776544          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHh----hccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLS----YGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~----~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                        .+.|+.+|.+.-.+...    ...++++++..-|+.+-.|+-...   +...+...+.+.+ 
T Consensus       182 ------------------ysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E---n~tkP~~t~ii~g-  239 (331)
T KOG1210|consen  182 ------------------YSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE---NKTKPEETKIIEG-  239 (331)
T ss_pred             ------------------ccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc---cccCchheeeecC-
Confidence                              46677777655444443    335689999999999888754432   1112211111111 


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                                     .-+.+.-+++|.++..-+.+.
T Consensus       240 ---------------~ss~~~~e~~a~~~~~~~~rg  260 (331)
T KOG1210|consen  240 ---------------GSSVIKCEEMAKAIVKGMKRG  260 (331)
T ss_pred             ---------------CCCCcCHHHHHHHHHhHHhhc
Confidence                           334577899999999877653

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.43  E-value=1.1e-11  Score=106.86  Aligned_cols=198  Identities=13%  Similarity=0.036  Sum_probs=126.7

Q ss_pred             HHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----CCCEEEEeccCCccccchh
Q 019415           22 LIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----GCDFVFHVATPLQHIDGYL   97 (341)
Q Consensus        22 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~Vi~~a~~~~~~~~~~   97 (341)
                      +++.|++.|++|++++| +..+.   .          ..+++++|+++.+++.++++    ++|++||+||....   .+
T Consensus         1 ~a~~l~~~G~~Vv~~~r-~~~~~---~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~---~~   63 (241)
T PRK12428          1 TARLLRFLGARVIGVDR-REPGM---T----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT---AP   63 (241)
T ss_pred             ChHHHHhCCCEEEEEeC-Ccchh---h----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC---CC
Confidence            47889999999999999 75431   0          13468899999998888876    58999999997542   33


Q ss_pred             HhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC------CccCcchhhh
Q 019415           98 YKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP------LTCHNEYLRV  170 (341)
Q Consensus        98 ~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~------~~~~~~~~~~  170 (341)
                      ++..+++|+.++..+++++...- ...++|++||..++... .      ..+..|......+..      ..........
T Consensus        64 ~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (241)
T PRK12428         64 VELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWP-Q------RLELHKALAATASFDEGAAWLAAHPVALATG  136 (241)
T ss_pred             HHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccc-c------chHHHHhhhccchHHHHHHhhhccCCCcccH
Confidence            67899999999999999987641 13699999999854311 1      011111000000000      0001123578


Q ss_pred             HHHhHHHHHHHHHhhc-----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          171 YIESKMKSEKELLSYG-----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       171 Y~~sK~~~E~~~~~~~-----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                      |+.||...+.+.+.++     ..|+++..++||.+.++.....  .+.....   .....   ...         ...+.
T Consensus       137 Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~--~~~~~~~---~~~~~---~~~---------~~~~~  199 (241)
T PRK12428        137 YQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF--RSMLGQE---RVDSD---AKR---------MGRPA  199 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccc--hhhhhhH---hhhhc---ccc---------cCCCC
Confidence            9999999998887665     3489999999999988743221  0000000   00000   000         22256


Q ss_pred             cHHHHHHHHHHhhcC
Q 019415          246 HIDDVCEAHIFCMEK  260 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~  260 (341)
                      ..+|+|+++.+++..
T Consensus       200 ~pe~va~~~~~l~s~  214 (241)
T PRK12428        200 TADEQAAVLVFLCSD  214 (241)
T ss_pred             CHHHHHHHHHHHcCh
Confidence            789999999998864

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.42  E-value=5.4e-12  Score=101.40  Aligned_cols=163  Identities=20%  Similarity=0.177  Sum_probs=123.2

Q ss_pred             CCcEEEEecC-cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGG-EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~Ga-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ..++|||||+ +|-||.+|++.+.+.|++|.+..| +.++.   ..+...    .++.....|+++++++.+...     
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR-~~e~M---~~L~~~----~gl~~~kLDV~~~~~V~~v~~evr~~   77 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATAR-RLEPM---AQLAIQ----FGLKPYKLDVSKPEEVVTVSGEVRAN   77 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcc-ccchH---hhHHHh----hCCeeEEeccCChHHHHHHHHHHhhC
Confidence            4589999987 799999999999999999999999 76542   223221    268889999999987776643     


Q ss_pred             ---CCCEEEEeccCCc-ccc----chhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQ-HID----GYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~-~~~----~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                         +.|+.||.||..- ...    ....+..+++|+.|..++.++....  .....+|+++|..++-+.+.         
T Consensus        78 ~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf---------  148 (289)
T KOG1209|consen   78 PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF---------  148 (289)
T ss_pred             CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch---------
Confidence               4799999998532 221    3445688999999988888776533  11369999999986664322         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                         .+.|..||++.-.+.+.+. +   .|++++.+-+|.|--.
T Consensus       149 -------------------~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~  188 (289)
T KOG1209|consen  149 -------------------GSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATD  188 (289)
T ss_pred             -------------------hhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence                               5799999999988888776 4   3888888888877443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.42  E-value=6.5e-12  Score=136.00  Aligned_cols=169  Identities=17%  Similarity=0.046  Sum_probs=130.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCc----------------------------------------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLED----------------------------------------   43 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~----------------------------------------   43 (341)
                      +++.+|||||++-||..+++.|+++ |.+|++++| +...                                        
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gR-s~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGR-SSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeC-CcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            4578999999999999999999998 699999999 7210                                        


Q ss_pred             -----hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------CCCEEEEeccCCcccc-----chhHhHhhhhhhh
Q 019415           44 -----KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------GCDFVFHVATPLQHID-----GYLYKNVVEACVG  107 (341)
Q Consensus        44 -----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~  107 (341)
                           .+....+..+......+.++.+|++|.+.+.+++.      ++|.|||+||......     .+.++..+++|+.
T Consensus      2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                 00001122222233578899999999988887765      4799999999754322     5667899999999


Q ss_pred             HHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-
Q 019415          108 AAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-  186 (341)
Q Consensus       108 ~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-  186 (341)
                      |+.++++++.... .++||++||...+++...                            ...|+.+|...+.+.+.+. 
T Consensus      2155 G~~~Ll~al~~~~-~~~IV~~SSvag~~G~~g----------------------------qs~YaaAkaaL~~la~~la~ 2205 (2582)
T TIGR02813      2155 GLLSLLAALNAEN-IKLLALFSSAAGFYGNTG----------------------------QSDYAMSNDILNKAALQLKA 2205 (2582)
T ss_pred             HHHHHHHHHHHhC-CCeEEEEechhhcCCCCC----------------------------cHHHHHHHHHHHHHHHHHHH
Confidence            9999999998876 789999999887664332                            4679999999988888777 


Q ss_pred             cC-CceEEEEecCceeCC
Q 019415          187 SS-GLEVVALALGVVAGD  203 (341)
Q Consensus       187 ~~-~~~~~vlRp~~v~G~  203 (341)
                      +. ++++..+.+|.+-+.
T Consensus      2206 ~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813      2206 LNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred             HcCCcEEEEEECCeecCC
Confidence            43 689999999887654

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.42  E-value=1.4e-11  Score=106.77  Aligned_cols=166  Identities=18%  Similarity=0.137  Sum_probs=121.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch--hhhhHhhhCCCCC-CceEEEecCCCC-hHHHHHHhc--
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK--SKVDLLKSLPGAE-TRLIFFEAEIYD-PDTFENAIQ--   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~-~~~~~~~~Dl~~-~~~~~~~~~--   78 (341)
                      ++++||||||++-||.++++.|++.|+.|+++.| +....  ........  ... ..+.+...|+++ .+.+..+++  
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAAR-RSEEEAAEALAAAIK--EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcC-CCchhhHHHHHHHHH--hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999998888 65431  11111111  111 267788899998 776666554  


Q ss_pred             -----CCCEEEEeccCCcc----cc--chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQH----ID--GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~----~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                           ++|++||+||....    ..  .+.++..+++|+.+...+.+++...-..+++|++||.... +...        
T Consensus        81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~--------  151 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPP--------  151 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCC--------
Confidence                 48999999998643    11  4567899999999999988855443211299999998743 2211        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCcee
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVA  201 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~  201 (341)
                                         ....|+.||...+.+.+.++ +   .|+++..+-||.+-
T Consensus       152 -------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         152 -------------------GQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             -------------------CcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence                               02689999999988888876 3   48999999999554

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.39  E-value=2.6e-11  Score=103.84  Aligned_cols=160  Identities=22%  Similarity=0.190  Sum_probs=122.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +.+-|||||+-.-.|..|+++|.++|+.|.+-.- ..+..+.+.....    .+....++.|+++++++.++.+      
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl-~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCL-TEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEee-cCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            4467999999999999999999999999999766 5544333333332    3588899999999999998875      


Q ss_pred             ---CCCEEEEeccCCcc---cc---chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQH---ID---GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~---~~---~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         +.=.+||+||+...   .+   .+++...+++|+.|+..+..+.    +++.  .|+|++||.+.--   +      
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~---~------  171 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRV---A------  171 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCc---c------
Confidence               35689999996543   22   5667788999998888776654    5554  7999999976322   1      


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCc
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGV  199 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~  199 (341)
                                         .....+|..||...|.....+. +   .|+.+.++-||.
T Consensus       172 -------------------~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~  210 (322)
T KOG1610|consen  172 -------------------LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGF  210 (322)
T ss_pred             -------------------CcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCc
Confidence                               1125789999999998888776 3   499999999993

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.33  E-value=5.7e-10  Score=98.76  Aligned_cols=221  Identities=13%  Similarity=0.047  Sum_probs=129.8

Q ss_pred             CCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCC--------chhhhhHhhhC-CCC-------------CCce
Q 019415            5 SNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLE--------DKSKVDLLKSL-PGA-------------ETRL   60 (341)
Q Consensus         5 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~~-~~~-------------~~~~   60 (341)
                      ++|.+|||||+  .-||+++++.|+++|++|.+.+| ...        ...+....... .+.             ....
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~   85 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW-VPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP   85 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec-cchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence            57899999995  89999999999999999988664 310        00000000000 000             0011


Q ss_pred             EEEecCCCC--------hHHHHHHh-------cCCCEEEEeccCCc----c-cc--chhHhHhhhhhhhHHHHHHHHHHh
Q 019415           61 IFFEAEIYD--------PDTFENAI-------QGCDFVFHVATPLQ----H-ID--GYLYKNVVEACVGAAKKIASFCVK  118 (341)
Q Consensus        61 ~~~~~Dl~~--------~~~~~~~~-------~~~d~Vi~~a~~~~----~-~~--~~~~~~~~~~nv~~~~~l~~~~~~  118 (341)
                      +-+..|+.+        .+++++++       .++|++||+||...    . ..  .+.++..+++|+.+..++++++..
T Consensus        86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p  165 (299)
T PRK06300         86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP  165 (299)
T ss_pred             EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            122222222        11233333       35899999997532    1 11  456678899999999999888865


Q ss_pred             cC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceE
Q 019415          119 SG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEV  192 (341)
Q Consensus       119 ~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~  192 (341)
                      .- .-.++|++||.....+...                           ....|+.||...+.+.+.++ +    +|+++
T Consensus       166 ~m~~~G~ii~iss~~~~~~~p~---------------------------~~~~Y~asKaAl~~lt~~la~el~~~~gIrV  218 (299)
T PRK06300        166 IMNPGGSTISLTYLASMRAVPG---------------------------YGGGMSSAKAALESDTKVLAWEAGRRWGIRV  218 (299)
T ss_pred             HhhcCCeEEEEeehhhcCcCCC---------------------------ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence            41 1257999988664332111                           01369999999998888776 3    38999


Q ss_pred             EEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEE
Q 019415          193 VALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFC  269 (341)
Q Consensus       193 ~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~  269 (341)
                      ..+.||.+-.+.....   .. ............+             ...+...+|++.++.+++...  ...| ++.+
T Consensus       219 n~V~PG~v~T~~~~~~---~~-~~~~~~~~~~~~p-------------~~r~~~peevA~~v~~L~s~~~~~itG~~i~v  281 (299)
T PRK06300        219 NTISAGPLASRAGKAI---GF-IERMVDYYQDWAP-------------LPEPMEAEQVGAAAAFLVSPLASAITGETLYV  281 (299)
T ss_pred             EEEEeCCccChhhhcc---cc-cHHHHHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence            9999999865532110   00 0111111111100             122456899999999988643  2445 4444


Q ss_pred             e
Q 019415          270 T  270 (341)
Q Consensus       270 ~  270 (341)
                      .
T Consensus       282 d  282 (299)
T PRK06300        282 D  282 (299)
T ss_pred             C
Confidence            3

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.19  E-value=2.5e-10  Score=88.80  Aligned_cols=209  Identities=19%  Similarity=0.155  Sum_probs=143.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++...|||||..-+|...++.|+++|.+|..++-|+.......+.+      ..++.|.+.|++.++++..++.      
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel------g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL------GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh------CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            4457899999999999999999999999999988554433333322      3488999999999998888875      


Q ss_pred             -CCCEEEEeccCCccc----------c-chhHhHhhhhhhhHHHHHHHHHHhc---------CCcCEEEEecccccccCC
Q 019415           79 -GCDFVFHVATPLQHI----------D-GYLYKNVVEACVGAAKKIASFCVKS---------GTVKRLIYTASVLCASPL  137 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~----------~-~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~I~~Ss~~~~~~~  137 (341)
                       +.|..+||||+....          . .+++++.+++|+.|+.|+++.....         |+-.-+|.+.|.+++.+.
T Consensus        82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq  161 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ  161 (260)
T ss_pred             cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence             479999999964321          1 4566788999999999997754211         122357777777755543


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHH----HHHHhhccCCceEEEEecCceeCCCCCCCCCCCc
Q 019415          138 KEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSE----KELLSYGSSGLEVVALALGVVAGDTNLPYSSTPV  213 (341)
Q Consensus       138 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E----~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~  213 (341)
                      ..                            ...|+.||...-    -+.++++..|+++..+-||.+--|-...   +|.
T Consensus       162 ~g----------------------------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss---lpe  210 (260)
T KOG1199|consen  162 TG----------------------------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS---LPE  210 (260)
T ss_pred             cc----------------------------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh---hhH
Confidence            33                            578999998543    3455555459999999999875553222   333


Q ss_pred             hhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc
Q 019415          214 SVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG  265 (341)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g  265 (341)
                      -+..|+.+......               -.-|..+.+..+..+++++-..|
T Consensus       211 kv~~fla~~ipfps---------------rlg~p~eyahlvqaiienp~lng  247 (260)
T KOG1199|consen  211 KVKSFLAQLIPFPS---------------RLGHPHEYAHLVQAIIENPYLNG  247 (260)
T ss_pred             HHHHHHHHhCCCch---------------hcCChHHHHHHHHHHHhCcccCC
Confidence            33333333322211               23346677778888888887666

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.16  E-value=4e-10  Score=99.87  Aligned_cols=177  Identities=15%  Similarity=0.090  Sum_probs=117.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +++||+|+|++|.||+.++..|+..+  .++..+++ ........+.....    .  .....+.++++++.+.++++|+
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di-~~~~g~a~Dl~~~~----~--~~~v~~~td~~~~~~~l~gaDv   79 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDI-VGAPGVAADLSHID----T--PAKVTGYADGELWEKALRGADL   79 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEec-CCCcccccchhhcC----c--CceEEEecCCCchHHHhCCCCE
Confidence            56799999999999999999999655  68888877 54321111111111    1  2334456666666788999999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||++||...... ......+..|+..+.++++++++++ .+++|+++|-.+.....-.     .....+...        
T Consensus        80 VVitaG~~~~~~-~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~-----~~~~~~~sg--------  144 (321)
T PTZ00325         80 VLICAGVPRKPG-MTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIA-----AETLKKAGV--------  144 (321)
T ss_pred             EEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHH-----HhhhhhccC--------
Confidence            999999865432 2345889999999999999999998 9999999997632211000     000011111        


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNL  206 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~  206 (341)
                        ..+...||.+-...-++-...+ ..++....++ +.|+|.+..
T Consensus       145 --~p~~~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd  186 (321)
T PTZ00325        145 --YDPRKLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG  186 (321)
T ss_pred             --CChhheeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence              1234677776444444444444 3478777787 888898765

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.15  E-value=9.3e-10  Score=94.31  Aligned_cols=171  Identities=15%  Similarity=0.096  Sum_probs=121.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHH----HHHHhcC--C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDT----FENAIQG--C   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~----~~~~~~~--~   80 (341)
                      .=..|||||.-||++.+++|+++|.+|..++| +.++.......-. ....-.++++..|.++++.    +.+.+.+  +
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsR-t~~KL~~v~kEI~-~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISR-TQEKLEAVAKEIE-EKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHH-HHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            34789999999999999999999999999999 7755333322111 1122468899999998764    4444444  5


Q ss_pred             CEEEEeccCCcccc-------chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-------GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-------~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      -+.||++|......       .......+.+|+.++..+.+.    +.+.+ ..-+|++||.+..-+.            
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~------------  194 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPT------------  194 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccC------------
Confidence            68999999866221       113356777888886666554    44444 5689999998754422            


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY  208 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~  208 (341)
                                      .-.+.|+.+|...+.+-..+. +   .|+.+..+-|..|-+......
T Consensus       195 ----------------p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  195 ----------------PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             ----------------hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence                            225899999998877777665 3   499999999999988755544

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.13  E-value=2.5e-10  Score=93.00  Aligned_cols=216  Identities=15%  Similarity=0.147  Sum_probs=136.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |.....+.|||||++--||..++..+.+.+-+.....+ +..... .+.+.....  +...+..+|++....+.++++  
T Consensus         1 m~~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~-~r~~a~-~~~L~v~~g--d~~v~~~g~~~e~~~l~al~e~~   76 (253)
T KOG1204|consen    1 MDLNMRKVILLTGASRGIGTGSVATILAEDDEALRYGV-ARLLAE-LEGLKVAYG--DDFVHVVGDITEEQLLGALREAP   76 (253)
T ss_pred             CCcccceEEEEecCCCCccHHHHHHHHhcchHHHHHhh-hccccc-ccceEEEec--CCcceechHHHHHHHHHHHHhhh
Confidence            56555678999999999999999999888765444333 221101 111111111  233344556655443443332  


Q ss_pred             -----CCCEEEEeccCCccc--------cchhHhHhhhhhhhHHHHHHHHHHhcC--C--cCEEEEecccccccCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI--------DGYLYKNVVEACVGAAKKIASFCVKSG--T--VKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~--~~~~I~~Ss~~~~~~~~~~~  141 (341)
                           +.|+|||.||....-        ..+.+...|+.|+.+...+...+...-  +  .+.+|++||.+++-+...  
T Consensus        77 r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~--  154 (253)
T KOG1204|consen   77 RKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSS--  154 (253)
T ss_pred             hhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccH--
Confidence                 479999999965532        256678999999999999877664442  1  267899999987765544  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc--cC-CceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG--SS-GLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~-~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                                ...|+.+|++.+.+++.++  +. ++++..++||.|--+............+..
T Consensus       155 --------------------------wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~  208 (253)
T KOG1204|consen  155 --------------------------WAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPAD  208 (253)
T ss_pred             --------------------------HHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHH
Confidence                                      5789999999999999998  54 899999999998544221110000011111


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      .....       ....      .-..+.-.+.++.+..++++.
T Consensus       209 l~~f~-------el~~------~~~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  209 LKMFK-------ELKE------SGQLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             HHHHH-------HHHh------cCCcCChhhHHHHHHHHHHhc
Confidence            11111       1111      334666788888888888765

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.06  E-value=2.1e-09  Score=87.44  Aligned_cols=103  Identities=18%  Similarity=0.238  Sum_probs=76.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-------   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------   79 (341)
                      |+++|||||||+|. +++.|+++|++|++++| +........  ..++. ...+.++.+|+.|++++.+++++       
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R-~~~~~~~l~--~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~   75 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIAR-REVKLENVK--RESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGP   75 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEEC-CHHHHHHHH--HHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999998876 99999999999999999 654322211  11221 24788899999999988888763       


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcC----EEEEecccc
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK----RLIYTASVL  132 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~----~~I~~Ss~~  132 (341)
                      +|++|+.                 +.+.++.++..+|++.+ ++    +|+|+=+..
T Consensus        76 id~lv~~-----------------vh~~~~~~~~~~~~~~g-v~~~~~~~~h~~gs~  114 (177)
T PRK08309         76 FDLAVAW-----------------IHSSAKDALSVVCRELD-GSSETYRLFHVLGSA  114 (177)
T ss_pred             CeEEEEe-----------------ccccchhhHHHHHHHHc-cCCCCceEEEEeCCc
Confidence            4555544                 23556788999999999 88    899886554

>PLN00106 malate dehydrogenase

Probab=99.01  E-value=4.4e-09  Score=93.39  Aligned_cols=174  Identities=16%  Similarity=0.142  Sum_probs=115.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +.||+|+|++|.||+.++..|+..+  .++.++++ +.......+ +..   .....  ...++.+.+++.+.++++|+|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di-~~~~g~a~D-l~~---~~~~~--~i~~~~~~~d~~~~l~~aDiV   90 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDI-ANTPGVAAD-VSH---INTPA--QVRGFLGDDQLGDALKGADLV   90 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEec-CCCCeeEch-hhh---CCcCc--eEEEEeCCCCHHHHcCCCCEE
Confidence            4699999999999999999999766  48888888 552211111 111   11111  233444455678899999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+||...... ...++.+..|...++++++.+++++ .+.+|+++|=-+.....-.     ........  .       
T Consensus        91 VitAG~~~~~g-~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~-----t~~~~~~s--~-------  154 (323)
T PLN00106         91 IIPAGVPRKPG-MTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIA-----AEVLKKAG--V-------  154 (323)
T ss_pred             EEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHH-----HHHHHHcC--C-------
Confidence            99999865532 3356889999999999999999999 8888888885432000000     00001111  1       


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDT  204 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~  204 (341)
                       ..+...||.++...+++-..++ ..+++...++- .|+|.+
T Consensus       155 -~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~-~ViGeH  194 (323)
T PLN00106        155 -YDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDV-PVVGGH  194 (323)
T ss_pred             -CCcceEEEEecchHHHHHHHHHHHhCCChhheEE-EEEEeC
Confidence             1245789999988888888777 56888888854 455544

>PRK06720 hypothetical protein; Provisional

Probab=99.00  E-value=1.3e-08  Score=82.23  Aligned_cols=125  Identities=15%  Similarity=0.117  Sum_probs=80.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHh------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAI------   77 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   77 (341)
                      +++.++||||+|.||.++++.|++.|++|.+++| +....... ..+..   ......++.+|+++.+.+.+++      
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDI-DQESGQATVEEITN---LGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999998 65432211 22221   1235778899999988777654      


Q ss_pred             -cCCCEEEEeccCCcccc--ch-hHhHhhhhhhhH----HHHHHHHHHhcC------CcCEEEEeccccc
Q 019415           78 -QGCDFVFHVATPLQHID--GY-LYKNVVEACVGA----AKKIASFCVKSG------TVKRLIYTASVLC  133 (341)
Q Consensus        78 -~~~d~Vi~~a~~~~~~~--~~-~~~~~~~~nv~~----~~~l~~~~~~~~------~~~~~I~~Ss~~~  133 (341)
                       .++|++||+||......  .+ +.+.....|+.+    +..+.....+.+      ...||-.+||.++
T Consensus        91 ~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         91 FSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             cCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence             36899999999755322  11 111112333333    333333333333      1358888888764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.95  E-value=5.9e-09  Score=93.73  Aligned_cols=91  Identities=27%  Similarity=0.384  Sum_probs=75.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ||+|||+|| |+||+.++..|+++| ++|++.+| +..++.++....     ..+++..+.|..|.+.+.+++++.|+||
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdR-s~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~~d~VI   73 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADR-SKEKCARIAELI-----GGKVEALQVDAADVDALVALIKDFDLVI   73 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeC-CHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhcCCEEE
Confidence            579999997 999999999999999 99999999 765544333222     1389999999999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG  120 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~  120 (341)
                      |++.+...                 .+++++|.+.|
T Consensus        74 n~~p~~~~-----------------~~i~ka~i~~g   92 (389)
T COG1748          74 NAAPPFVD-----------------LTILKACIKTG   92 (389)
T ss_pred             EeCCchhh-----------------HHHHHHHHHhC
Confidence            99876442                 36888888888

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.91  E-value=1.9e-08  Score=89.92  Aligned_cols=120  Identities=14%  Similarity=0.084  Sum_probs=81.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-------CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-------YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      +.||+||||+|+||++++..|+..+       .+|.+++| +... .+.+....  ...+.......|+....++.+.++
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~-~~~~-~~~~g~~~--Dl~d~~~~~~~~~~~~~~~~~~l~   77 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDI-PPAL-KALEGVVM--ELQDCAFPLLKSVVATTDPEEAFK   77 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEc-CCcc-ccccceee--ehhhccccccCCceecCCHHHHhC
Confidence            4689999999999999999999854       58999988 5432 11111000  000001012234444566778889


Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecc
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTAS  130 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss  130 (341)
                      ++|+|||+||...... ....++++.|+.....+.....++. .-..+|.+|.
T Consensus        78 ~aDiVI~tAG~~~~~~-~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          78 DVDVAILVGAMPRKEG-MERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             CCCEEEEeCCcCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            9999999999865543 2245889999999999999988884 2345565654

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.74  E-value=1.6e-06  Score=71.29  Aligned_cols=217  Identities=12%  Similarity=0.095  Sum_probs=132.7

Q ss_pred             CCCCcEEEEecC--cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            3 HKSNFKVCVTGG--EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         3 ~~~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      ..++||+||+|-  .-.|+..+++.|.++|.++..... +..   ..++.+.+........++++|.++.+.+.++|.  
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~-~e~---l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQ-GER---LEKRVEELAEELGSDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEec-cHH---HHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHH
Confidence            346799999997  578999999999999999877665 432   223333332222245679999999988888876  


Q ss_pred             -----CCCEEEEeccCCcccc---------chhHhHhhhhhhhHHHHHHHHHHhcC----CcCEEEEecccccccCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID---------GYLYKNVVEACVGAAKKIASFCVKSG----TVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~---------~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~I~~Ss~~~~~~~~~~  140 (341)
                           +.|.++|+.|......         .+.+....++-.-+...++++++..-    ++-.+-|.+|..++-     
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vP-----  153 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVP-----  153 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecC-----
Confidence                 5899999998655322         22233334444445555555554431    222444444443211     


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                                ..+.-|.+|...|.-++.++ +   .|+++..+-.|.|----.       ..+.
T Consensus       154 --------------------------nYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAa-------sgI~  200 (259)
T COG0623         154 --------------------------NYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAA-------SGIG  200 (259)
T ss_pred             --------------------------CCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHh-------hccc
Confidence                                      24679999999999998887 4   378888888776622111       1133


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC--CCCCc-eEEEec
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK--PSMSG-RFFCTN  271 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~g-~~n~~~  271 (341)
                      .|.+.+...+.. .+         .+.-+..+||...-..++..  +...| +.++.+
T Consensus       201 ~f~~~l~~~e~~-aP---------l~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~  248 (259)
T COG0623         201 DFRKMLKENEAN-AP---------LRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDS  248 (259)
T ss_pred             cHHHHHHHHHhh-CC---------ccCCCCHHHhhhhHHHHhcchhcccccceEEEcC
Confidence            333333222211 11         33345588998888888765  23455 444433

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.70  E-value=1.4e-07  Score=80.19  Aligned_cols=69  Identities=22%  Similarity=0.281  Sum_probs=49.3

Q ss_pred             CcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC--hHHHHHHhcCCCEEEEeccCCc
Q 019415           14 GEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD--PDTFENAIQGCDFVFHVATPLQ   91 (341)
Q Consensus        14 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~Vi~~a~~~~   91 (341)
                      +|||+|++|++.|+++|++|+++.| ....       .  +....+++++.++..+  .+.+.+.++++|+|||+||...
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r-~~~~-------~--~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTT-KTAV-------K--PEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEEC-cccc-------c--CCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            4899999999999999999999988 4321       0  0011356666654332  2456667778999999999865


Q ss_pred             c
Q 019415           92 H   92 (341)
Q Consensus        92 ~   92 (341)
                      .
T Consensus        94 ~   94 (229)
T PRK06732         94 Y   94 (229)
T ss_pred             c
Confidence            3

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.69  E-value=2.8e-07  Score=82.21  Aligned_cols=173  Identities=11%  Similarity=0.089  Sum_probs=114.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecCCCCc----hhhhhHhhhCCCCCCceEEEecCCCChHHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-------IVHTTLRPNLED----KSKVDLLKSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      ++||.|+|++|.||..++..|+..|.       ++..+++ +...    ....+..........++++. .      ...
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di-~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-~------~~~   73 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLEL-PQALKALEGVAMELEDCAFPLLAEIVIT-D------DPN   73 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEec-CCcccccceeehhhhhccccccCceEEe-c------CcH
Confidence            57999999999999999999998874       6887777 4322    01111111110111122221 1      235


Q ss_pred             HHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCC-cCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           75 NAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGT-VKRLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        75 ~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                      +.++++|+||-+||...... ....+.+..|+...+.+.....+++. -..+|.+|...-+--.         -.+... 
T Consensus        74 ~~~~daDivvitaG~~~k~g-~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~---------~~~k~s-  142 (322)
T cd01338          74 VAFKDADWALLVGAKPRGPG-MERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNAL---------IAMKNA-  142 (322)
T ss_pred             HHhCCCCEEEEeCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHH---------HHHHHc-
Confidence            67789999999999865432 23458899999999999999999872 4566666643211100         001111 


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCC
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNL  206 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~  206 (341)
                        +       ...+...||.++...+++...++ ..+++...+|...|||++..
T Consensus       143 --g-------~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~  187 (322)
T cd01338         143 --P-------DIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP  187 (322)
T ss_pred             --C-------CCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc
Confidence              0       01235789999999999999888 56999999999999999754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09620 hypothetical protein; Provisional

Probab=98.68  E-value=5.1e-08  Score=82.51  Aligned_cols=82  Identities=24%  Similarity=0.290  Sum_probs=56.6

Q ss_pred             CCcEEEEecCc----------------chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC
Q 019415            5 SNFKVCVTGGE----------------GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~Gat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   68 (341)
                      ++|+||||+|.                ||+|++|++.|+++|++|+++.+ .....  ..   ..+. ......+.++..
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g-~~~~~--~~---~~~~-~~~~~~V~s~~d   74 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG-YFAEK--PN---DINN-QLELHPFEGIID   74 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC-CCcCC--Cc---ccCC-ceeEEEEecHHH
Confidence            46899999886                99999999999999999999877 32110  00   0000 113444555443


Q ss_pred             ChHHHHHHhc--CCCEEEEeccCCccc
Q 019415           69 DPDTFENAIQ--GCDFVFHVATPLQHI   93 (341)
Q Consensus        69 ~~~~~~~~~~--~~d~Vi~~a~~~~~~   93 (341)
                      ..+.+.+++.  ++|+|||+||.....
T Consensus        75 ~~~~l~~~~~~~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         75 LQDKMKSIITHEKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHHhcccCCCEEEECcccccee
Confidence            3467777784  689999999986544

>PRK05086 malate dehydrogenase; Provisional

Probab=98.63  E-value=5.2e-07  Score=80.31  Aligned_cols=117  Identities=17%  Similarity=0.110  Sum_probs=80.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHH-C--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLD-K--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      |||+|+||+|.||++++..|.. .  ++++.+++| +.....  ..+ .+.+. +....+.+  .+.+++.+.++++|+|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~-~~~~~g--~al-Dl~~~-~~~~~i~~--~~~~d~~~~l~~~DiV   73 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDI-APVTPG--VAV-DLSHI-PTAVKIKG--FSGEDPTPALEGADVV   73 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEec-CCCCcc--eeh-hhhcC-CCCceEEE--eCCCCHHHHcCCCCEE
Confidence            7899999999999999998855 2  468888888 532100  001 11111 11112333  2234556777899999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |.++|....... .....+..|.....++++++.+.+ .+++|.+.|=-
T Consensus        74 IitaG~~~~~~~-~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP  120 (312)
T PRK05086         74 LISAGVARKPGM-DRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNP  120 (312)
T ss_pred             EEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCc
Confidence            999998654432 345889999999999999999998 78888777743

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.56  E-value=1.1e-06  Score=73.19  Aligned_cols=177  Identities=15%  Similarity=0.176  Sum_probs=117.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-----eEEEEecCCCCchhh-hhHhhh-CCCCCCceEEEecCCCChHHHHHH---
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY-----IVHTTLRPNLEDKSK-VDLLKS-LPGAETRLIFFEAEIYDPDTFENA---   76 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~---   76 (341)
                      |.+||||++.-+|-+|+..|++..-     .+.+..| +.++.+. ...+.. .|...-++.++..|++|..++.++   
T Consensus         4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR-~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCR-NMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeC-ChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            5689999999999999999998742     3556678 7665332 222222 233334788999999997655544   


Q ss_pred             ----hcCCCEEEEeccCCccc--------------------------------cchhHhHhhhhhhhHHHHHHHHHHhc-
Q 019415           77 ----IQGCDFVFHVATPLQHI--------------------------------DGYLYKNVVEACVGAAKKIASFCVKS-  119 (341)
Q Consensus        77 ----~~~~d~Vi~~a~~~~~~--------------------------------~~~~~~~~~~~nv~~~~~l~~~~~~~-  119 (341)
                          ++..|.|+-.||.....                                ..+...++++.||.|..-++...... 
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence                45689999999865432                                14556788899999988776654332 


Q ss_pred             --CCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEE
Q 019415          120 --GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVV  193 (341)
Q Consensus       120 --~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~  193 (341)
                        +....+|.+||-.+ -          +..++=+|+-..        ....+|..||++.+.+-.... +   .|+..-
T Consensus       163 ~~~~~~~lvwtSS~~a-~----------kk~lsleD~q~~--------kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qy  223 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMA-R----------KKNLSLEDFQHS--------KGKEPYSSSKRLTDLLHVALNRNFKPLGINQY  223 (341)
T ss_pred             hcCCCCeEEEEeeccc-c----------cccCCHHHHhhh--------cCCCCcchhHHHHHHHHHHHhccccccchhhh
Confidence              22358999999763 1          222332222222        224679999999887655544 2   377778


Q ss_pred             EEecCceeCC
Q 019415          194 ALALGVVAGD  203 (341)
Q Consensus       194 vlRp~~v~G~  203 (341)
                      ++.||.....
T Consensus       224 vv~pg~~tt~  233 (341)
T KOG1478|consen  224 VVQPGIFTTN  233 (341)
T ss_pred             cccCceeecc
Confidence            8888776554

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.55  E-value=4.1e-07  Score=83.98  Aligned_cols=76  Identities=29%  Similarity=0.515  Sum_probs=57.4

Q ss_pred             EEEecCcchHHHHHHHHHHHCC-C-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKG-Y-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+|+|| |++|+.+++.|++.+ . +|++.+| +..+   .+.+...- ....+.+++.|+.|.+++.++++++|+||||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r-~~~~---~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~   74 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADR-NPEK---AERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDVVINC   74 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEES-SHHH---HHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEEC-CHHH---HHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCEEEEC
Confidence            799999 999999999999996 4 8999999 6543   33332210 2358999999999999999999999999999


Q ss_pred             ccCC
Q 019415           87 ATPL   90 (341)
Q Consensus        87 a~~~   90 (341)
                      +++.
T Consensus        75 ~gp~   78 (386)
T PF03435_consen   75 AGPF   78 (386)
T ss_dssp             SSGG
T ss_pred             Cccc
Confidence            9876

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.54  E-value=4.2e-06  Score=75.30  Aligned_cols=84  Identities=13%  Similarity=0.069  Sum_probs=59.8

Q ss_pred             CcEEEEecCcchHHHH--HHHHHHHCCCeEEEEecCCCCchh-h--------hhHhh-hCCCCCCceEEEecCCCChHHH
Q 019415            6 NFKVCVTGGEGFVGSW--LIKKLLDKGYIVHTTLRPNLEDKS-K--------VDLLK-SLPGAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~-~--------~~~~~-~~~~~~~~~~~~~~Dl~~~~~~   73 (341)
                      +|++|||||++-+|.+  +++.| +.|.+|.++.+ ...... +        ...+. ........+..+++|+++++.+
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~-~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFF-EKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEec-CcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            5799999999999999  89999 99999888875 322111 1        01111 1111223467899999999877


Q ss_pred             HHHhc-------CCCEEEEeccCCc
Q 019415           74 ENAIQ-------GCDFVFHVATPLQ   91 (341)
Q Consensus        74 ~~~~~-------~~d~Vi~~a~~~~   91 (341)
                      .++++       ++|++||++|...
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCC
Confidence            76664       5899999999763

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.54  E-value=6.3e-07  Score=77.04  Aligned_cols=96  Identities=16%  Similarity=0.297  Sum_probs=70.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      |+|||+||||. |+.|++.|.+.|++|++.+| .......   +..     .+...+..+..+.+++.+.++  ++|+||
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~-t~~~~~~---~~~-----~g~~~v~~g~l~~~~l~~~l~~~~i~~VI   70 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVT-TSEGKHL---YPI-----HQALTVHTGALDPQELREFLKRHSIDILV   70 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEc-cCCcccc---ccc-----cCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence            68999999999 99999999999999999988 5543111   111     122334456677777888886  599999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEE
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY  127 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~  127 (341)
                      +++.+..              ...+.++.++|.+.+ ++.+=|
T Consensus        71 DAtHPfA--------------~~is~~a~~a~~~~~-ipylR~   98 (256)
T TIGR00715        71 DATHPFA--------------AQITTNATAVCKELG-IPYVRF   98 (256)
T ss_pred             EcCCHHH--------------HHHHHHHHHHHHHhC-CcEEEE
Confidence            9976543              234678999999998 775544

This enzyme was found to be a monomer by gel filtration.

>cd00704 MDH Malate dehydrogenase

Probab=98.48  E-value=2.1e-06  Score=76.71  Aligned_cols=107  Identities=16%  Similarity=0.085  Sum_probs=75.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHCC-------CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh----------
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKG-------YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP----------   70 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----------   70 (341)
                      ||.|+||+|.||+.++..|+..|       +++..+++ +... +             ..+-...|+.+.          
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di-~~~~-~-------------~~~g~~~Dl~d~~~~~~~~~~i   66 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDI-PPAM-K-------------ALEGVVMELQDCAFPLLKGVVI   66 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEec-CCcc-C-------------ccceeeeehhhhcccccCCcEE
Confidence            79999999999999999999865       25888887 5410 0             111222222221          


Q ss_pred             -HHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecc
Q 019415           71 -DTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTAS  130 (341)
Q Consensus        71 -~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss  130 (341)
                       ....+.++++|+|||+||...... ....+.+..|+...+.+.....+. +.-..+|.+|-
T Consensus        67 ~~~~~~~~~~aDiVVitAG~~~~~g-~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          67 TTDPEEAFKDVDVAILVGAFPRKPG-MERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             ecChHHHhCCCCEEEEeCCCCCCcC-CcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence             245678889999999999865443 335688999999999999999998 33445666554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.45  E-value=9e-07  Score=73.53  Aligned_cols=81  Identities=26%  Similarity=0.201  Sum_probs=61.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +.++++|+||+|.+|+.+++.|++.|++|++++| +..+   .+.+.. +.. ..+......|..+.+++.+.++++|+|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R-~~~~---~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~diV  101 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGR-DLER---AQKAADSLRA-RFGEGVGAVETSDDAARAAAIKGADVV  101 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-CHHH---HHHHHHHHHh-hcCCcEEEeeCCCHHHHHHHHhcCCEE
Confidence            4579999999999999999999999999999999 7543   222221 110 113456677888988899999999999


Q ss_pred             EEeccCC
Q 019415           84 FHVATPL   90 (341)
Q Consensus        84 i~~a~~~   90 (341)
                      |++.+..
T Consensus       102 i~at~~g  108 (194)
T cd01078         102 FAAGAAG  108 (194)
T ss_pred             EECCCCC
Confidence            9976543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.41  E-value=3.5e-06  Score=75.33  Aligned_cols=107  Identities=18%  Similarity=0.101  Sum_probs=75.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC-------eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---------
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY-------IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---------   71 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---------   71 (341)
                      ||.|+||+|.||++++..|...+.       ++..+++ +...              +..+-...|+.+..         
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~-~~~~--------------~~a~g~~~Dl~d~~~~~~~~~~~   65 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDI-PPAM--------------KVLEGVVMELMDCAFPLLDGVVP   65 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEec-CCcc--------------cccceeEeehhcccchhcCceec
Confidence            589999999999999999998542       5888887 5432              01222333333322         


Q ss_pred             --HHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecc
Q 019415           72 --TFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTAS  130 (341)
Q Consensus        72 --~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss  130 (341)
                        ...+.++++|+||++||..... .....+.+..|+...+.+.....++ +.-..+|.+|.
T Consensus        66 ~~~~~~~~~~aDiVVitAG~~~~~-~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        66 THDPAVAFTDVDVAILVGAFPRKE-GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             cCChHHHhCCCCEEEEcCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence              3457788999999999986543 2335688999999999999999998 33345565554

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.31  E-value=9.3e-06  Score=63.54  Aligned_cols=115  Identities=21%  Similarity=0.135  Sum_probs=76.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchh-hhhHhhhC-CCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKS-KVDLLKSL-PGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+||+|.+|++++..|...+  .++..+++ +..... ....+... ........+..   .+    .+.++++|+
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~-~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~~aDi   72 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDI-NEDKAEGEALDLSHASAPLPSPVRITS---GD----YEALKDADI   72 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEES-SHHHHHHHHHHHHHHHHGSTEEEEEEE---SS----GGGGTTESE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEecc-Ccccceeeehhhhhhhhhccccccccc---cc----ccccccccE
Confidence            689999999999999999999986  58888888 643211 11112111 11111233333   22    335668999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ||-+|+...... ....+.++.|....+.+.+...+.+.-..+|.+|.
T Consensus        73 vvitag~~~~~g-~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   73 VVITAGVPRKPG-MSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             EEETTSTSSSTT-SSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             EEEecccccccc-ccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCC
Confidence            999999765432 33558899999999999999999973345555543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.24  E-value=4.6e-06  Score=72.80  Aligned_cols=84  Identities=13%  Similarity=0.321  Sum_probs=64.4

Q ss_pred             EEEEecCcchHHHHHHHHHHH----CCCeEEEEecCCCCchhhh-hHhhhC--CCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLD----KGYIVHTTLRPNLEDKSKV-DLLKSL--PGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~-~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      -++|.||+||-|.++++.++.    .|...-+..| +..+.... +....-  +.....+ ++.+|..|++++.+..+++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGR-n~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGR-NEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQA   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecC-CHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhh
Confidence            589999999999999999999    6778888888 76442211 111111  1223344 8999999999999999999


Q ss_pred             CEEEEeccCCccc
Q 019415           81 DFVFHVATPLQHI   93 (341)
Q Consensus        81 d~Vi~~a~~~~~~   93 (341)
                      .+|+||+|+...-
T Consensus        85 ~vivN~vGPyR~h   97 (423)
T KOG2733|consen   85 RVIVNCVGPYRFH   97 (423)
T ss_pred             EEEEeccccceec
Confidence            9999999998764

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.20  E-value=6.5e-05  Score=67.08  Aligned_cols=120  Identities=21%  Similarity=0.176  Sum_probs=81.3

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHh
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      |..+.++||.|+|+ |.||+.++..|+..|.  ++.++++ +..... ....+.........+.....   +   + +.+
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~-~~~~~~g~~~Dl~~~~~~~~~~~i~~~---~---~-~~~   71 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDI-NKEKAEGDAMDLSHAVPFTSPTKIYAG---D---Y-SDC   71 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC-CCchhHHHHHHHHhhccccCCeEEEeC---C---H-HHh
Confidence            55566789999997 9999999999999885  7888888 665421 11222221111123333322   2   2 346


Q ss_pred             cCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           78 QGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        78 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +++|+||-+||...... ....+.++.|....+.+++.+.+.+.-.++|.+|-
T Consensus        72 ~~adivIitag~~~k~g-~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         72 KDADLVVITAGAPQKPG-ETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             CCCCEEEEecCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            89999999999855432 23458899999999999999998873345565554

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.16  E-value=8.9e-06  Score=74.61  Aligned_cols=75  Identities=16%  Similarity=0.173  Sum_probs=57.5

Q ss_pred             CCcEEEEecC----------------cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC
Q 019415            5 SNFKVCVTGG----------------EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   68 (341)
                      ++++||||||                +|.+|.++++.|.++|++|+++.+ +...       . .+   .+  +...|++
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~-~~~~-------~-~~---~~--~~~~dv~  252 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSG-PVNL-------P-TP---AG--VKRIDVE  252 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCC-Cccc-------c-CC---CC--cEEEccC
Confidence            4689999999                999999999999999999999988 4321       0 11   12  3456888


Q ss_pred             ChHHHHHHh----cCCCEEEEeccCCccc
Q 019415           69 DPDTFENAI----QGCDFVFHVATPLQHI   93 (341)
Q Consensus        69 ~~~~~~~~~----~~~d~Vi~~a~~~~~~   93 (341)
                      +.+++.+.+    .++|++||+||.....
T Consensus       253 ~~~~~~~~v~~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        253 SAQEMLDAVLAALPQADIFIMAAAVADYR  281 (399)
T ss_pred             CHHHHHHHHHHhcCCCCEEEEcccccccc
Confidence            877666665    4689999999975543

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.15  E-value=8.3e-06  Score=72.78  Aligned_cols=73  Identities=27%  Similarity=0.293  Sum_probs=52.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-C-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-G-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++++|+||||+|+||+.++++|.++ | .+++++.| +..+   ...+..        ++..+++.   ++.+++.++|+
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R-~~~r---l~~La~--------el~~~~i~---~l~~~l~~aDi  218 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVAR-QQER---LQELQA--------ELGGGKIL---SLEEALPEADI  218 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcC-CHHH---HHHHHH--------HhccccHH---hHHHHHccCCE
Confidence            4689999999999999999999865 5 68999888 6432   222221        01123333   46678889999


Q ss_pred             EEEeccCCcc
Q 019415           83 VFHVATPLQH   92 (341)
Q Consensus        83 Vi~~a~~~~~   92 (341)
                      |||+++....
T Consensus       219 Vv~~ts~~~~  228 (340)
T PRK14982        219 VVWVASMPKG  228 (340)
T ss_pred             EEECCcCCcC
Confidence            9999997654

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.04  E-value=0.00015  Score=64.83  Aligned_cols=117  Identities=14%  Similarity=0.086  Sum_probs=77.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecCCCCc----hhhhhHhhhCCCCCCceEEEecCCCChHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-------IVHTTLRPNLED----KSKVDLLKSLPGAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   73 (341)
                      ++.||.|+||+|.||++++..|+..|.       ++..+++ +...    ....+..........++++.       ...
T Consensus         2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di-~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~   73 (323)
T TIGR01759         2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDI-PPAMKALEGVAMELEDCAFPLLAGVVAT-------TDP   73 (323)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEec-CCcccccchHHHHHhhccccccCCcEEe-------cCh
Confidence            567999999999999999999998873       7888877 5421    11111111111111122221       123


Q ss_pred             HHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCC-cCEEEEecc
Q 019415           74 ENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGT-VKRLIYTAS  130 (341)
Q Consensus        74 ~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~I~~Ss  130 (341)
                      .+.++++|+||.+||..... .....+.+..|....+.+...+.+.+. -..+|.+|-
T Consensus        74 ~~~~~daDvVVitAG~~~k~-g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        74 EEAFKDVDAALLVGAFPRKP-GMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             HHHhCCCCEEEEeCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence            56778999999999976433 334568899999999999999999973 345555553

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.01  E-value=2.2e-05  Score=71.67  Aligned_cols=100  Identities=9%  Similarity=0.150  Sum_probs=63.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHH-HhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFEN-AIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~   82 (341)
                      .+|||.|+||||++|..|++.|.++ +.+|+.+++ +.+....+...        ......+|+.+.++++. .++++|+
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s-~~saG~~i~~~--------~~~l~~~~~~~~~~~~~~~~~~~Dv  107 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTA-DRKAGQSFGSV--------FPHLITQDLPNLVAVKDADFSDVDA  107 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEC-hhhcCCCchhh--------CccccCccccceecCCHHHhcCCCE
Confidence            3579999999999999999999999 579999887 54331111111        11122233333222222 2578999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLC  133 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~  133 (341)
                      ||.+.+..                 ...+++..+ +.+  .++|-.|++.-
T Consensus       108 Vf~Alp~~-----------------~s~~i~~~~-~~g--~~VIDlSs~fR  138 (381)
T PLN02968        108 VFCCLPHG-----------------TTQEIIKAL-PKD--LKIVDLSADFR  138 (381)
T ss_pred             EEEcCCHH-----------------HHHHHHHHH-hCC--CEEEEcCchhc
Confidence            98876431                 244566665 345  78999999873

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.01  E-value=4.1e-05  Score=68.25  Aligned_cols=116  Identities=18%  Similarity=0.147  Sum_probs=75.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHh-----hhCCCCCCceEEEecCCCChHHHHHHhcC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLL-----KSLPGAETRLIFFEAEIYDPDTFENAIQG   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (341)
                      |||.|+|++|.+|..++..|+..|+  +|++++| +... ++++..     ..+........+.   .+  .+.+ .+++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~-~~~~-~~l~~~~~dl~d~~~~~~~~~~i~---~~--~d~~-~l~~   72 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISR-PKSL-EKLKGLRLDIYDALAAAGIDAEIK---IS--SDLS-DVAG   72 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEEC-cccc-cccccccchhhhchhccCCCcEEE---EC--CCHH-HhCC
Confidence            6899999999999999999999986  5999888 5411 111111     1110111111111   11  1233 4889


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      +|+||-+++...... .+..+.++.|+.....+++.+.+.+.-..+|.+++.
T Consensus        73 aDiViitag~p~~~~-~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          73 SDIVIITAGVPRKEG-MSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             CCEEEEecCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            999999999755432 223478889999999999998887633467777764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.00  E-value=6e-05  Score=63.92  Aligned_cols=74  Identities=26%  Similarity=0.315  Sum_probs=59.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi~   85 (341)
                      |+++|.| .|.+|.++++.|.+.||+|+++.+ +...   ......   .....+.+.+|-++++.++++ ++++|+++-
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~-d~~~---~~~~~~---~~~~~~~v~gd~t~~~~L~~agi~~aD~vva   72 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDR-DEER---VEEFLA---DELDTHVVIGDATDEDVLEEAGIDDADAVVA   72 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEc-CHHH---HHHHhh---hhcceEEEEecCCCHHHHHhcCCCcCCEEEE
Confidence            6788988 899999999999999999999998 6543   222111   012788999999999999998 788999987


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +-+
T Consensus        73 ~t~   75 (225)
T COG0569          73 ATG   75 (225)
T ss_pred             eeC
Confidence            744

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.99  E-value=3.8e-05  Score=67.83  Aligned_cols=84  Identities=11%  Similarity=0.066  Sum_probs=60.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYI-VHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++++++|+|| |-+|++++..|++.|.+ |+++.| +....++.+.+ +.+......+.+...|+.+.+.+.+.++.+|+
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R-~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNI-KDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC-CchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            4578999998 89999999999999985 999999 75311222222 22222223456677899888888888888999


Q ss_pred             EEEeccCC
Q 019415           83 VFHVATPL   90 (341)
Q Consensus        83 Vi~~a~~~   90 (341)
                      |||+-...
T Consensus       203 lINaTp~G  210 (289)
T PRK12548        203 LVNATLVG  210 (289)
T ss_pred             EEEeCCCC
Confidence            99986544

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.98  E-value=0.00085  Score=63.07  Aligned_cols=172  Identities=17%  Similarity=0.173  Sum_probs=116.6

Q ss_pred             CcEEEEecC-cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCC----CCCceEEEecCCCChHHHHHHhc--
Q 019415            6 NFKVCVTGG-EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPG----AETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         6 ~~~ilI~Ga-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      .+..||||| -|.||..++..|++.|..|++..- +.+. .+.+..+.+..    ....+-++..+.....++..+++  
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS-~~s~-~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI  473 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTS-RLSE-ERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI  473 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcc-cccH-HHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence            467899998 699999999999999999999766 6654 44454444322    23467778888877777776654  


Q ss_pred             -------------------CCCEEEEeccCCcccc---chhH-hHhhhhhhhHHHHHHHHHHhcCC---c---CEEEEec
Q 019415           79 -------------------GCDFVFHVATPLQHID---GYLY-KNVVEACVGAAKKIASFCVKSGT---V---KRLIYTA  129 (341)
Q Consensus        79 -------------------~~d~Vi~~a~~~~~~~---~~~~-~~~~~~nv~~~~~l~~~~~~~~~---~---~~~I~~S  129 (341)
                                         .+|.+|-+|++.....   ..+. +...++-+....+++-..++.+.   +   -++|...
T Consensus       474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPg  553 (866)
T COG4982         474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPG  553 (866)
T ss_pred             ccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecC
Confidence                               2689999998755433   1111 23456667777777777777661   1   2456666


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC----CceEEEEecCceeCCC
Q 019415          130 SVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS----GLEVVALALGVVAGDT  204 (341)
Q Consensus       130 s~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~----~~~~~vlRp~~v~G~~  204 (341)
                      |.. .+....                            ...|+.+|...|.++.++. ++    -+.++--++|++-|.+
T Consensus       554 SPN-rG~FGg----------------------------DGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTG  604 (866)
T COG4982         554 SPN-RGMFGG----------------------------DGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTG  604 (866)
T ss_pred             CCC-CCccCC----------------------------CcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccc
Confidence            654 222222                            3689999999999999987 54    2455556777777766


Q ss_pred             CCCC
Q 019415          205 NLPY  208 (341)
Q Consensus       205 ~~~~  208 (341)
                      ....
T Consensus       605 LMg~  608 (866)
T COG4982         605 LMGH  608 (866)
T ss_pred             ccCC
Confidence            5544

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.96  E-value=2.6e-05  Score=66.19  Aligned_cols=65  Identities=18%  Similarity=0.205  Sum_probs=45.6

Q ss_pred             cCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh-------cCCCEEEE
Q 019415           13 GGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI-------QGCDFVFH   85 (341)
Q Consensus        13 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~d~Vi~   85 (341)
                      .++|.||.++++.|+++|++|+++.| ...       +...       ....+|+.+.+...+++       .++|++||
T Consensus        22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~-~~~-------l~~~-------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVn   86 (227)
T TIGR02114        22 HSTGHLGKIITETFLSAGHEVTLVTT-KRA-------LKPE-------PHPNLSIREIETTKDLLITLKELVQEHDILIH   86 (227)
T ss_pred             CcccHHHHHHHHHHHHCCCEEEEEcC-hhh-------cccc-------cCCcceeecHHHHHHHHHHHHHHcCCCCEEEE
Confidence            34899999999999999999998876 311       0000       01346777766555443       36899999


Q ss_pred             eccCCcc
Q 019415           86 VATPLQH   92 (341)
Q Consensus        86 ~a~~~~~   92 (341)
                      +||....
T Consensus        87 nAgv~d~   93 (227)
T TIGR02114        87 SMAVSDY   93 (227)
T ss_pred             CCEeccc
Confidence            9997543

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=97.95  E-value=9.9e-06  Score=53.31  Aligned_cols=39  Identities=18%  Similarity=0.234  Sum_probs=28.1

Q ss_pred             CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          298 DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       298 ~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +++...+..|++|+++ |||+|+++|+++++++.+|.+++
T Consensus        19 ~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n   58 (62)
T PF13950_consen   19 PGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN   58 (62)
T ss_dssp             TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred             CCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence            6789999999999987 99999999999999999999886

...

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.93  E-value=5e-05  Score=62.06  Aligned_cols=78  Identities=15%  Similarity=0.151  Sum_probs=49.5

Q ss_pred             CCcEEEEecC----------------cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC
Q 019415            5 SNFKVCVTGG----------------EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   68 (341)
                      ++++||||+|                ||..|.+|++.+..+|++|+.+.. ...-           ..+.++..+.+.-.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g-~~~~-----------~~p~~~~~i~v~sa   69 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHG-PSSL-----------PPPPGVKVIRVESA   69 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE--TTS---------------TTEEEEE-SSH
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEec-Cccc-----------cccccceEEEecch
Confidence            3678888875                699999999999999999999988 3211           01236777765433


Q ss_pred             C--hHHHHHHhcCCCEEEEeccCCcccc
Q 019415           69 D--PDTFENAIQGCDFVFHVATPLQHID   94 (341)
Q Consensus        69 ~--~~~~~~~~~~~d~Vi~~a~~~~~~~   94 (341)
                      .  .+.+.+.++++|++||+||......
T Consensus        70 ~em~~~~~~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   70 EEMLEAVKELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             HHHHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred             hhhhhhhccccCcceeEEEecchhheee
Confidence            2  2445555667899999999877643

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.92  E-value=4.5e-05  Score=66.22  Aligned_cols=79  Identities=16%  Similarity=0.257  Sum_probs=61.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      .-++|-||+||.|.-++++|+..|.+-....| +.   .+++.+...  +  +..+-..++-+++.+++.+.+.++|+||
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgR-s~---~kl~~l~~~--L--G~~~~~~p~~~p~~~~~~~~~~~VVlnc   78 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGR-SS---AKLDALRAS--L--GPEAAVFPLGVPAALEAMASRTQVVLNC   78 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccC-CH---HHHHHHHHh--c--CccccccCCCCHHHHHHHHhcceEEEec
Confidence            46999999999999999999999988766677 55   455555442  1  2334445555699999999999999999


Q ss_pred             ccCCccc
Q 019415           87 ATPLQHI   93 (341)
Q Consensus        87 a~~~~~~   93 (341)
                      +|+....
T Consensus        79 vGPyt~~   85 (382)
T COG3268          79 VGPYTRY   85 (382)
T ss_pred             ccccccc
Confidence            9998764

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.92  E-value=0.00013  Score=64.64  Aligned_cols=118  Identities=16%  Similarity=0.104  Sum_probs=79.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      |||.|+|++|.||++++..|+..+  .++..+++ +... .....+....   ....+....  ..+++.+.++++|+||
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi-~~a~-g~alDL~~~~---~~~~i~~~~--~~~~~y~~~~daDivv   73 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDI-VNTP-GVAADLSHIN---TPAKVTGYL--GPEELKKALKGADVVV   73 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEec-Cccc-eeehHhHhCC---CcceEEEec--CCCchHHhcCCCCEEE
Confidence            689999999999999999999887  57888887 5211 1111111110   112222110  1223567888999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      -+||...... ....+.++.|......+.+...+.+.-..+|.+|-..
T Consensus        74 itaG~~~k~g-~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          74 IPAGVPRKPG-MTRDDLFNINAGIVRDLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             EeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence            9999865432 2355889999999999999999887444666665543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.86  E-value=0.00025  Score=63.45  Aligned_cols=117  Identities=15%  Similarity=0.102  Sum_probs=77.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecCCCCc----hhhhhHhhhCCCCCCceEEEecCCCChHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-------IVHTTLRPNLED----KSKVDLLKSLPGAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   73 (341)
                      +++||.|+|++|.||++++..|+..|.       ++..+++ +...    ....+..........++.+.       ...
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi-~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-------~~~   74 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEI-PPALKALEGVVMELDDCAFPLLAGVVIT-------DDP   74 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEec-CCcccccceeehhhhhhhhhhcCCcEEe-------cCh
Confidence            568999999999999999999988762       6787777 4321    11111111110111122221       123


Q ss_pred             HHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecc
Q 019415           74 ENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTAS  130 (341)
Q Consensus        74 ~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss  130 (341)
                      .+.++++|+||-+||..... .....+.+..|....+.+.+...++. ....+|.+|-
T Consensus        75 y~~~~daDiVVitaG~~~k~-g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         75 NVAFKDADVALLVGARPRGP-GMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             HHHhCCCCEEEEeCCCCCCC-CCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            46777999999999975443 23456889999999999999999954 2456666664

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.86  E-value=0.00033  Score=53.29  Aligned_cols=98  Identities=20%  Similarity=0.320  Sum_probs=56.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHCC-CeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKG-YIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ||.|+||||++|+.|++.|.+.. .++..+ .| +.+....+......+.....+.+..   .+.+.+    .++|+||.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~~Dvvf~   72 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSS-SRSAGKPLSEVFPHPKGFEDLSVED---ADPEEL----SDVDVVFL   72 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEES-TTTTTSBHHHTTGGGTTTEEEBEEE---TSGHHH----TTESEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeee-ccccCCeeehhccccccccceeEee---cchhHh----hcCCEEEe
Confidence            79999999999999999999974 465544 44 3322222322222111111222222   333333    78899999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |.+..                 ....+...+.+.| + ++|=.|+..
T Consensus        73 a~~~~-----------------~~~~~~~~~~~~g-~-~ViD~s~~~  100 (121)
T PF01118_consen   73 ALPHG-----------------ASKELAPKLLKAG-I-KVIDLSGDF  100 (121)
T ss_dssp             -SCHH-----------------HHHHHHHHHHHTT-S-EEEESSSTT
T ss_pred             cCchh-----------------HHHHHHHHHhhCC-c-EEEeCCHHH
Confidence            95421                 1345666667777 3 677666654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.84  E-value=8.1e-05  Score=68.12  Aligned_cols=102  Identities=15%  Similarity=0.103  Sum_probs=71.7

Q ss_pred             CCcEEEEecC----------------cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC
Q 019415            5 SNFKVCVTGG----------------EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   68 (341)
                      ++++||||||                ||.+|.++++.|..+|++|+++.+ ....        ..+   ..+  ...|+.
T Consensus       184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g-~~~~--------~~~---~~~--~~~~v~  249 (390)
T TIGR00521       184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITG-PVSL--------LTP---PGV--KSIKVS  249 (390)
T ss_pred             CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCC-CCcc--------CCC---CCc--EEEEec
Confidence            4689999999                478999999999999999999887 4322        011   122  457888


Q ss_pred             ChHHH-HHHh----cCCCEEEEeccCCccccch-------hHhHhhhhhhhHHHHHHHHHHhcC
Q 019415           69 DPDTF-ENAI----QGCDFVFHVATPLQHIDGY-------LYKNVVEACVGAAKKIASFCVKSG  120 (341)
Q Consensus        69 ~~~~~-~~~~----~~~d~Vi~~a~~~~~~~~~-------~~~~~~~~nv~~~~~l~~~~~~~~  120 (341)
                      +.+++ +.++    .++|++|++||........       .....+..|+.-+..++...++..
T Consensus       250 ~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       250 TAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             cHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            87766 4444    3689999999986653210       001234567888888888888764

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.82  E-value=0.0006  Score=60.83  Aligned_cols=114  Identities=20%  Similarity=0.123  Sum_probs=77.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhh-hHhhhC-CCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKV-DLLKSL-PGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +||.|+|+ |.+|+.++..|+..|  ++|.+++| +....... ..+... ........+...   +.    +.++++|+
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~-~~~~~~~~a~dL~~~~~~~~~~~~i~~~---~~----~~l~~aDI   71 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDI-NEEKAEGEALDLEDALAFLPSPVKIKAG---DY----SDCKDADI   71 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC-CcchhhHhHhhHHHHhhccCCCeEEEcC---CH----HHhCCCCE
Confidence            47999995 999999999999998  68999998 76542211 111111 101112223222   22    23679999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ||.+++..... .....+.++.|..-.+.+.+.+++.+.-..+|.+|-
T Consensus        72 VIitag~~~~~-g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          72 VVITAGAPQKP-GETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             EEEccCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            99999976543 233458899999999999999999874445666654

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.79  E-value=0.00014  Score=65.66  Aligned_cols=94  Identities=17%  Similarity=0.239  Sum_probs=59.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCe---EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYI---VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +|||+|+||||++|++|++.|.+++|.   +..++| ..+....+.    +    .+......|+.+.     .++++|+
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s-~~~~g~~l~----~----~g~~i~v~d~~~~-----~~~~vDv   66 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLAS-ARSAGKELS----F----KGKELKVEDLTTF-----DFSGVDI   66 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEc-cccCCCeee----e----CCceeEEeeCCHH-----HHcCCCE
Confidence            479999999999999999999998764   577777 433311111    1    1223444455432     2358999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ||.+++...                 +..++..+.+.| + ++|=.|+..
T Consensus        67 Vf~A~g~g~-----------------s~~~~~~~~~~G-~-~VIDlS~~~   97 (334)
T PRK14874         67 ALFSAGGSV-----------------SKKYAPKAAAAG-A-VVIDNSSAF   97 (334)
T ss_pred             EEECCChHH-----------------HHHHHHHHHhCC-C-EEEECCchh
Confidence            998865432                 234455555667 3 677677754

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.72  E-value=0.0015  Score=58.56  Aligned_cols=123  Identities=15%  Similarity=0.049  Sum_probs=80.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhh---CCCCCCceEEEecCCCChHHHHHH
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKS---LPGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      |..-+.+||.|+| +|.+|+.++..|+..|. +|.++++ +.... ..+.+..   ....+....+...  .|   + +.
T Consensus         1 ~~~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi-~~~~~-~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~   71 (321)
T PTZ00082          1 MTMIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDI-VKNIP-QGKALDISHSNVIAGSNSKVIGT--NN---Y-ED   71 (321)
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeC-CCchh-hHHHHHHHhhhhccCCCeEEEEC--CC---H-HH
Confidence            4544568999999 69999999999999995 8888887 76542 2222211   1111112233321  12   3 35


Q ss_pred             hcCCCEEEEeccCCccccc----hhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           77 IQGCDFVFHVATPLQHIDG----YLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ++++|+||.+++.......    .+..+.+..|+.....+++.+.+......+|.+|-..
T Consensus        72 l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         72 IAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             hCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            7899999999987553221    0345678889999999999998887233677777543

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.72  E-value=0.00061  Score=60.59  Aligned_cols=117  Identities=20%  Similarity=0.174  Sum_probs=77.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ||.|+|++|.||++++..|+..+.  ++.++++ +.......+ +....   ....+....  +.+++.+.++++|+||-
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di-~~a~g~a~D-L~~~~---~~~~i~~~~--~~~~~~~~~~daDivvi   73 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDI-AGAAGVAAD-LSHIP---TAASVKGFS--GEEGLENALKGADVVVI   73 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecC-CCCcEEEch-hhcCC---cCceEEEec--CCCchHHHcCCCCEEEE
Confidence            589999999999999999998874  7888877 542211111 11111   112222101  11235678889999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +||...... ....+.+..|..-.+.+.+...+.+.-..+|.+|-..
T Consensus        74 taG~~~~~g-~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        74 PAGVPRKPG-MTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             eCCCCCCCC-ccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCch
Confidence            999765432 3355889999999999999998887344566666544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.71  E-value=0.0014  Score=58.57  Aligned_cols=113  Identities=21%  Similarity=0.184  Sum_probs=74.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      |||.|+|+ |.+|..++..|+..|  .+|.++++ +..... ....+...............   +   + +.++++|+|
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~-~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiV   71 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDI-NKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVV   71 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEEC-CchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEE
Confidence            58999996 999999999999999  68999998 764322 11112221111112222222   2   2 347899999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      |-+++...... ....+....|+.....+++.+++.+.-..++.++
T Consensus        72 iita~~~~~~~-~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          72 VITAGANQKPG-ETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             EEccCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999754432 2344778899999999999998887333444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.66  E-value=0.00022  Score=72.55  Aligned_cols=79  Identities=14%  Similarity=0.053  Sum_probs=59.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-Ce-------------EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YI-------------VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP   70 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~   70 (341)
                      .+++|+|+|| |+||+..++.|++.+ ++             |++.++ +...   .+.+...   .+++..++.|+.|.
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~-~~~~---a~~la~~---~~~~~~v~lDv~D~  639 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASL-YLKD---AKETVEG---IENAEAVQLDVSDS  639 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECC-CHHH---HHHHHHh---cCCCceEEeecCCH
Confidence            3579999995 999999999998863 33             776666 5433   2222221   12677899999999


Q ss_pred             HHHHHHhcCCCEEEEeccCCc
Q 019415           71 DTFENAIQGCDFVFHVATPLQ   91 (341)
Q Consensus        71 ~~~~~~~~~~d~Vi~~a~~~~   91 (341)
                      +++.++++++|+||.+.....
T Consensus       640 e~L~~~v~~~DaVIsalP~~~  660 (1042)
T PLN02819        640 ESLLKYVSQVDVVISLLPASC  660 (1042)
T ss_pred             HHHHHhhcCCCEEEECCCchh
Confidence            999999999999999987633

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.65  E-value=0.00031  Score=63.61  Aligned_cols=100  Identities=17%  Similarity=0.208  Sum_probs=60.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEE-ecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFF-EAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++||+|+||||++|+++++.|.+. +.++..+.+ +.+....+...  .    +.+... ..++.+.+..  .+.++|+|
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~-~~~~g~~l~~~--~----~~~~~~~~~~~~~~~~~--~~~~vD~V   72 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTS-RSSAGKPLSDV--H----PHLRGLVDLVLEPLDPE--ILAGADVV   72 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEEC-ccccCcchHHh--C----cccccccCceeecCCHH--HhcCCCEE
Confidence            479999999999999999999987 578877666 43221111111  0    011111 1223333322  44679999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccccc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLC  133 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~  133 (341)
                      |-|.....                 ...++..+.+.|  +.+|=.|+..-
T Consensus        73 f~alP~~~-----------------~~~~v~~a~~aG--~~VID~S~~fR  103 (343)
T PRK00436         73 FLALPHGV-----------------SMDLAPQLLEAG--VKVIDLSADFR  103 (343)
T ss_pred             EECCCcHH-----------------HHHHHHHHHhCC--CEEEECCcccC
Confidence            88754311                 235566666666  78888888763

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.64  E-value=0.00013  Score=55.80  Aligned_cols=94  Identities=21%  Similarity=0.331  Sum_probs=54.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHH-CCCeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLD-KGYIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      |||.|.|++|.+|+.+++.+.+ .+.++.+. +| +.+... -+....+.+.    .  .....-.++++++++.+|+||
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~-~~~~~~-g~d~g~~~~~----~--~~~~~v~~~l~~~~~~~DVvI   72 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDR-KPSAKV-GKDVGELAGI----G--PLGVPVTDDLEELLEEADVVI   72 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEET-TTSTTT-TSBCHHHCTS----S--T-SSBEBS-HHHHTTH-SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEec-CCcccc-cchhhhhhCc----C--CcccccchhHHHhcccCCEEE
Confidence            6899999999999999999999 57886665 45 442200 0111111000    0  111111256788888899999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEE
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI  126 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I  126 (341)
                      .+..+                 ..+...++.|.+++ +.-++
T Consensus        73 DfT~p-----------------~~~~~~~~~~~~~g-~~~Vi   96 (124)
T PF01113_consen   73 DFTNP-----------------DAVYDNLEYALKHG-VPLVI   96 (124)
T ss_dssp             EES-H-----------------HHHHHHHHHHHHHT--EEEE
T ss_pred             EcCCh-----------------HHhHHHHHHHHhCC-CCEEE
Confidence            99521                 22456777888887 44333

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.63  E-value=0.00056  Score=64.60  Aligned_cols=75  Identities=24%  Similarity=0.152  Sum_probs=54.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh--hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS--KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++++|+|+|+++ +|..+++.|++.|++|++.++ +....-  ..+.+..     .++.++.+|..+     ....++|+
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~-~~~~~~~~~~~~l~~-----~~~~~~~~~~~~-----~~~~~~d~   71 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDE-KEEDQLKEALEELGE-----LGIELVLGEYPE-----EFLEGVDL   71 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeC-CchHHHHHHHHHHHh-----cCCEEEeCCcch-----hHhhcCCE
Confidence            468999999888 999999999999999999988 642211  1122222     156778888765     23567899


Q ss_pred             EEEeccCCc
Q 019415           83 VFHVATPLQ   91 (341)
Q Consensus        83 Vi~~a~~~~   91 (341)
                      ||+.++...
T Consensus        72 vv~~~g~~~   80 (450)
T PRK14106         72 VVVSPGVPL   80 (450)
T ss_pred             EEECCCCCC
Confidence            999998643

>PLN02602 lactate dehydrogenase

Probab=97.63  E-value=0.0021  Score=58.14  Aligned_cols=115  Identities=19%  Similarity=0.137  Sum_probs=75.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +||.|+|+ |.||+.++..|+..+  .++..++. +..... ....+...........+...  .+   + +.++++|+|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi-~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d---y-~~~~daDiV  109 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDV-NPDKLRGEMLDLQHAAAFLPRTKILAS--TD---Y-AVTAGSDLC  109 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-CCchhhHHHHHHHhhhhcCCCCEEEeC--CC---H-HHhCCCCEE
Confidence            69999995 999999999999887  47888877 654311 11112221112222322221  12   2 247799999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |-+||...... ....+.+..|+.-...+.+...+.+....+|.+|-
T Consensus       110 VitAG~~~k~g-~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        110 IVTAGARQIPG-ESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             EECCCCCCCcC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99999754432 23458889999999999999998873456666664

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.62  E-value=0.0016  Score=60.42  Aligned_cols=117  Identities=11%  Similarity=0.085  Sum_probs=78.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-------CC--eEEEEecCCCCchh--hhhHhhhCCCCCCceEEEecCCCChHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-------GY--IVHTTLRPNLEDKS--KVDLLKSLPGAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~   73 (341)
                      +.-||.|+|++|.||.+++-.|+..       |.  ++..+++ +.+...  ..+...........+.+..+   +    
T Consensus        99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~-~~~~a~G~amDL~daa~~~~~~v~i~~~---~----  170 (444)
T PLN00112         99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSER-SKQALEGVAMELEDSLYPLLREVSIGID---P----  170 (444)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcC-CcchhHHHHHHHHHhhhhhcCceEEecC---C----
Confidence            3458999999999999999999987       53  6777777 655422  11111111111122322222   2    


Q ss_pred             HHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHh-cCCcCEEEEecc
Q 019415           74 ENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVK-SGTVKRLIYTAS  130 (341)
Q Consensus        74 ~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~~~~~~I~~Ss  130 (341)
                      .+.++++|+||-.||...... ....+.++.|+...+.+.....+ .+.-..+|.+|-
T Consensus       171 ye~~kdaDiVVitAG~prkpG-~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        171 YEVFQDAEWALLIGAKPRGPG-MERADLLDINGQIFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             HHHhCcCCEEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCC
Confidence            356778999999999865432 33558899999999999999999 453455666664

>PRK04148 hypothetical protein; Provisional

Probab=97.61  E-value=0.00049  Score=52.68  Aligned_cols=96  Identities=22%  Similarity=0.261  Sum_probs=69.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|+++| .| -|.+++..|.+.|++|++++. ++..   .+....     ..+.++.+|+.++.  .++.+++|.|+
T Consensus        16 ~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi-~~~a---V~~a~~-----~~~~~v~dDlf~p~--~~~y~~a~liy   82 (134)
T PRK04148         16 KNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDI-NEKA---VEKAKK-----LGLNAFVDDLFNPN--LEIYKNAKLIY   82 (134)
T ss_pred             cCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHH-----hCCeEEECcCCCCC--HHHHhcCCEEE
Confidence            457899999 66 899999999999999999988 6542   333322     26789999999875  33455789887


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      -+=.+                .+....+++.|++.+ ++-+|..=|
T Consensus        83 sirpp----------------~el~~~~~~la~~~~-~~~~i~~l~  111 (134)
T PRK04148         83 SIRPP----------------RDLQPFILELAKKIN-VPLIIKPLS  111 (134)
T ss_pred             EeCCC----------------HHHHHHHHHHHHHcC-CCEEEEcCC
Confidence            76221                222456888899998 777765544

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.60  E-value=0.0007  Score=60.66  Aligned_cols=117  Identities=15%  Similarity=0.098  Sum_probs=77.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhh--hCCC-CCCceEEEecCCCChHHHHHHhcCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLK--SLPG-AETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~--~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      +.+||.|+|| |.+|+.++..|+..| .+|..+++ +..... ...++  .... ......+..     ..+++ .++++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di-~~~~~~-g~~lDl~~~~~~~~~~~~i~~-----~~d~~-~l~~A   74 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDV-IKGVPQ-GKALDLKHFSTLVGSNINILG-----TNNYE-DIKDS   74 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEEC-CCccch-hHHHHHhhhccccCCCeEEEe-----CCCHH-HhCCC
Confidence            4579999996 999999999999888 68888888 654322 11111  1111 111112211     12344 66899


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      |+||-+++...... ....+.+..|..-...+++.+.+...-..+|.+|-.
T Consensus        75 DiVVitag~~~~~g-~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP  124 (319)
T PTZ00117         75 DVVVITAGVQRKEE-MTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNP  124 (319)
T ss_pred             CEEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence            99999998755433 224578889999999999999888633457776654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.59  E-value=0.00025  Score=67.05  Aligned_cols=73  Identities=21%  Similarity=0.264  Sum_probs=59.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi~   85 (341)
                      |+|+|+|+ |.+|+++++.|.+.|++|++++| +...   .+.+..    ..++.++.+|.+++..+.++ ++++|.||-
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~-~~~~---~~~~~~----~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~   71 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDT-DEER---LRRLQD----RLDVRTVVGNGSSPDVLREAGAEDADLLIA   71 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEEC-CHHH---HHHHHh----hcCEEEEEeCCCCHHHHHHcCCCcCCEEEE
Confidence            68999996 99999999999999999999988 6543   333322    12688999999999999888 788999988


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        72 ~~~   74 (453)
T PRK09496         72 VTD   74 (453)
T ss_pred             ecC
Confidence            754

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.55  E-value=0.00022  Score=55.35  Aligned_cols=77  Identities=18%  Similarity=0.179  Sum_probs=52.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYI-VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++++++|+|+ |-.|+.++..|.+.|.+ |+++.| +.++   .+.+...- ....+.++.  +   +++.+.+.++|+|
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nR-t~~r---a~~l~~~~-~~~~~~~~~--~---~~~~~~~~~~Div   79 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNR-TPER---AEALAEEF-GGVNIEAIP--L---EDLEEALQEADIV   79 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEES-SHHH---HHHHHHHH-TGCSEEEEE--G---GGHCHHHHTESEE
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEEC-CHHH---HHHHHHHc-Cccccceee--H---HHHHHHHhhCCeE
Confidence            5689999995 88999999999999975 999999 7644   33332210 011344443  2   3355778899999


Q ss_pred             EEeccCCcc
Q 019415           84 FHVATPLQH   92 (341)
Q Consensus        84 i~~a~~~~~   92 (341)
                      |++.+....
T Consensus        80 I~aT~~~~~   88 (135)
T PF01488_consen   80 INATPSGMP   88 (135)
T ss_dssp             EE-SSTTST
T ss_pred             EEecCCCCc
Confidence            999776543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.55  E-value=0.0027  Score=56.58  Aligned_cols=117  Identities=20%  Similarity=0.070  Sum_probs=76.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCch-hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDK-SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      +.+||.|+|+ |.||+.++..|+..|  -++..+++ +.... .....+...........+...  .+   ++ .++++|
T Consensus         2 ~~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~-~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~d---y~-~~~~ad   73 (312)
T cd05293           2 PRNKVTVVGV-GQVGMACAISILAKGLADELVLVDV-VEDKLKGEAMDLQHGSAFLKNPKIEAD--KD---YS-VTANSK   73 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC-CccHHHHHHHHHHHhhccCCCCEEEEC--CC---HH-HhCCCC
Confidence            3579999995 999999999998887  47888877 55321 111112221111111223321  12   33 378999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +||-+||..... .....+.+..|..-.+.+.+.+++.+....+|.+|-
T Consensus        74 ivvitaG~~~k~-g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          74 VVIVTAGARQNE-GESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             EEEECCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            999999975543 223458899999999999999999874456666664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.53  E-value=0.0011  Score=59.23  Aligned_cols=116  Identities=17%  Similarity=0.061  Sum_probs=75.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhh--h-CCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLK--S-LPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      +|||.|+|| |.+|..++..|+..|. +|.++++ +.+... ...+.  . .........+..     ..++ +.++++|
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~-~~~~~~-~~~~dl~~~~~~~~~~~~i~~-----~~d~-~~~~~aD   72 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDI-VEGVPQ-GKALDIAEAAPVEGFDTKITG-----TNDY-EDIAGSD   72 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEEC-CCchhH-HHHHHHHhhhhhcCCCcEEEe-----CCCH-HHHCCCC
Confidence            479999997 9999999999999875 8999988 765422 11111  1 110011111111     1123 3478999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      +||.+++...... ....+.+.-|+.....+++.+.+...-..+|.+|-.
T Consensus        73 iVii~~~~p~~~~-~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP  121 (307)
T PRK06223         73 VVVITAGVPRKPG-MSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNP  121 (307)
T ss_pred             EEEECCCCCCCcC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence            9999998655332 234467788999999999988887633456666543

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.51  E-value=0.00043  Score=62.18  Aligned_cols=97  Identities=19%  Similarity=0.312  Sum_probs=57.6

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCe---EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYI---VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      |+  ++++|+|+||||++|..|++.|.+++|.   +..+.. ..+....+.    .    .+   ...++.+.+.. + +
T Consensus         1 m~--~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s-~~~aG~~l~----~----~~---~~l~~~~~~~~-~-~   64 (336)
T PRK05671          1 MS--QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLAS-SESAGHSVP----F----AG---KNLRVREVDSF-D-F   64 (336)
T ss_pred             CC--CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEEC-cccCCCeec----c----CC---cceEEeeCChH-H-h
Confidence            55  3489999999999999999999987653   334333 211111111    1    11   12223222222 1 4


Q ss_pred             cCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           78 QGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        78 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +++|+||.+.+. ..                ...++..+.+.|  .++|=.|++.
T Consensus        65 ~~vD~vFla~p~-~~----------------s~~~v~~~~~~G--~~VIDlS~~f  100 (336)
T PRK05671         65 SQVQLAFFAAGA-AV----------------SRSFAEKARAAG--CSVIDLSGAL  100 (336)
T ss_pred             cCCCEEEEcCCH-HH----------------HHHHHHHHHHCC--CeEEECchhh
Confidence            689999887652 10                233667777777  5688888876

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.50  E-value=0.0027  Score=55.91  Aligned_cols=114  Identities=22%  Similarity=0.145  Sum_probs=74.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCch-hhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDK-SKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+|+ |+||+.++..|+.++  .++..+++ +.... .....+.. .+..... ..+.+| .+    .+.+++.|+
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi-~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~----y~~~~~aDi   72 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDI-NEEKAEGVALDLSHAAAPLGSD-VKITGD-GD----YEDLKGADI   72 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEc-ccccccchhcchhhcchhccCc-eEEecC-CC----hhhhcCCCE
Confidence            58999999 999999999998875  48888888 52220 11111111 1111112 222222 11    456779999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      |+-.||...-.. ....+++..|..-...+.+...+.+....|+.+|
T Consensus        73 VvitAG~prKpG-mtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          73 VVITAGVPRKPG-MTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             EEEeCCCCCCCC-CCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence            999998766543 2345889999999999999999988323444443

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.49  E-value=0.00049  Score=62.36  Aligned_cols=101  Identities=18%  Similarity=0.231  Sum_probs=59.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC-CCeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK-GYIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      |||.|+||||++|..+++.|.+. +.++..+ ++ +.+....+...  .+... ..  ...++.+. +..++++++|+||
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s-~~sagk~~~~~--~~~l~-~~--~~~~~~~~-~~~~~~~~~DvVf   73 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSS-RESAGKPVSEV--HPHLR-GL--VDLNLEPI-DEEEIAEDADVVF   73 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEecc-chhcCCChHHh--Ccccc-cc--CCceeecC-CHHHhhcCCCEEE
Confidence            58999999999999999999987 4677744 43 32221111111  11110 10  01111111 2233445799998


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccccc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLC  133 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~  133 (341)
                      .|....                 ....++..+.+.|  .++|=.|+..-
T Consensus        74 ~alP~~-----------------~s~~~~~~~~~~G--~~VIDlS~~fR  103 (346)
T TIGR01850        74 LALPHG-----------------VSAELAPELLAAG--VKVIDLSADFR  103 (346)
T ss_pred             ECCCch-----------------HHHHHHHHHHhCC--CEEEeCChhhh
Confidence            886532                 2345666666667  78999999763

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.46  E-value=0.0044  Score=55.14  Aligned_cols=114  Identities=15%  Similarity=0.093  Sum_probs=75.4

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCch-hhhhHhhhCCCCC--CceEEEecCCCChHHHHHHhcCCCE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDK-SKVDLLKSLPGAE--TRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ||.|+|+ |.||+.++..|+..+.  ++..++. +.... .....+.......  ..+.+..+|       .+.++++|+
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di-~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~~~~aDi   71 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDV-NEGVAEGEALDFHHATALTYSTNTKIRAGD-------YDDCADADI   71 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC-CcchhhHHHHHHHhhhccCCCCCEEEEECC-------HHHhCCCCE
Confidence            5889997 9999999999998873  7888877 65431 1112222211111  234444433       456779999


Q ss_pred             EEEeccCCccccchh-HhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           83 VFHVATPLQHIDGYL-YKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~-~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ||-+||.......+. ..+.+..|..-.+.+...+.+++.-..+|.+|-
T Consensus        72 vvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          72 IVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             EEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            999999754433221 358899999999999999999983334444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.45  E-value=0.0011  Score=57.84  Aligned_cols=115  Identities=17%  Similarity=0.040  Sum_probs=76.7

Q ss_pred             EEEecCcchHHHHHHHHHHHCC----CeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKG----YIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      |.|+||+|.+|..++..|+..|    .+|..+++ +...... ...+..........++..     ..++.+.++++|+|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~-~~~~l~~~~~dl~~~~~~~~~~~i~~-----~~d~~~~~~~aDiV   74 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDI-DEEKLKGVAMDLQDAVEPLADIKVSI-----TDDPYEAFKDADVV   74 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeC-CcccchHHHHHHHHhhhhccCcEEEE-----CCchHHHhCCCCEE
Confidence            5799999999999999999988    78999888 6644221 122222211100112221     22356778899999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |-+++........ .......|+...+.+++.+++...-..+|.+|-
T Consensus        75 v~t~~~~~~~g~~-r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          75 IITAGVGRKPGMG-RLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             EECCCCCCCcCCC-HHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999876554322 336788899999999999998873445665543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.43  E-value=0.00055  Score=56.24  Aligned_cols=69  Identities=19%  Similarity=0.110  Sum_probs=45.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ||++.|.| +|.||+.|++.|.+.||+|++-+| +.++..........+    .        -.....+.+.+.+|+||-
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~-r~~~~~~a~a~~l~~----~--------i~~~~~~dA~~~aDVVvL   66 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSS-RGPKALAAAAAALGP----L--------ITGGSNEDAAALADVVVL   66 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecC-CChhHHHHHHHhhcc----c--------cccCChHHHHhcCCEEEE
Confidence            35666655 999999999999999999999877 655422222222211    1        122345567778899987


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      ...
T Consensus        67 AVP   69 (211)
T COG2085          67 AVP   69 (211)
T ss_pred             ecc
Confidence            643

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.41  E-value=0.0011  Score=57.55  Aligned_cols=69  Identities=19%  Similarity=0.200  Sum_probs=45.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      +|||.|+|++|.+|+.+++.+.+. +.++.++..++.......               ...++...+++.++++++|+||
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~---------------~~~~i~~~~dl~~ll~~~DvVi   65 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ---------------GALGVAITDDLEAVLADADVLI   65 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---------------CCCCccccCCHHHhccCCCEEE
Confidence            479999999999999999998875 578777544143321000               1122323345666777899999


Q ss_pred             EeccC
Q 019415           85 HVATP   89 (341)
Q Consensus        85 ~~a~~   89 (341)
                      +++.+
T Consensus        66 d~t~p   70 (257)
T PRK00048         66 DFTTP   70 (257)
T ss_pred             ECCCH
Confidence            98743

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.39  E-value=0.0023  Score=56.91  Aligned_cols=117  Identities=12%  Similarity=0.143  Sum_probs=74.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhC-CCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSL-PGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      |||.|+|+ |++|..++..|+..|+ +|+++++ +... .....+... +......   ...+.-..++++ ++++|+||
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi-~~~l-~~g~a~d~~~~~~~~~~---~~~i~~t~d~~~-~~~aDiVI   74 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDV-VEGI-PQGKALDMYEASPVGGF---DTKVTGTNNYAD-TANSDIVV   74 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeC-CCCh-hHHHHHhhhhhhhccCC---CcEEEecCCHHH-hCCCCEEE
Confidence            68999995 9999999999999886 8998887 5443 221211110 0000000   011111112333 67899999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      -+++...... ....+.+..|+.....+++.+.+.+.-..+|.+|-.
T Consensus        75 itag~p~~~~-~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP  120 (305)
T TIGR01763        75 ITAGLPRKPG-MSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNP  120 (305)
T ss_pred             EcCCCCCCcC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence            9999755432 223478889999999999998887633456666553

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=97.39  E-value=0.014  Score=45.78  Aligned_cols=144  Identities=18%  Similarity=0.110  Sum_probs=79.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC--C-hH----HHHHHhc-
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY--D-PD----TFENAIQ-   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--~-~~----~~~~~~~-   78 (341)
                      .||+|.||-|-+|++.++.+..++|-|.-++- ....           .. +.-.++.+|-.  + ++    .+-+.++ 
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl-~eNe-----------~A-d~sI~V~~~~swtEQe~~v~~~vg~sL~g   70 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDL-SENE-----------QA-DSSILVDGNKSWTEQEQSVLEQVGSSLQG   70 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEee-cccc-----------cc-cceEEecCCcchhHHHHHHHHHHHHhhcc
Confidence            58999999999999999999999999877655 3221           11 12233333321  1 12    2223333 


Q ss_pred             -CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHH------HHHhcCCcCEEEEecccc-cccCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIAS------FCVKSGTVKRLIYTASVL-CASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~------~~~~~~~~~~~I~~Ss~~-~~~~~~~~~~~~~~~~~~  150 (341)
                       +.|.||..||-+........+.+....++--..+..      .+.++=+..-++-+..+. +..+.+            
T Consensus        71 ekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTP------------  138 (236)
T KOG4022|consen   71 EKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTP------------  138 (236)
T ss_pred             cccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCC------------
Confidence             589999999876654422221111111211111111      121211123344444433 222211            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc--cCCce
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG--SSGLE  191 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~~~~  191 (341)
                                      .--.||.+|.+..++.+.++  ++|++
T Consensus       139 ----------------gMIGYGMAKaAVHqLt~SLaak~SGlP  165 (236)
T KOG4022|consen  139 ----------------GMIGYGMAKAAVHQLTSSLAAKDSGLP  165 (236)
T ss_pred             ----------------cccchhHHHHHHHHHHHHhcccccCCC
Confidence                            14689999999999999998  44553

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.38  E-value=0.00047  Score=61.62  Aligned_cols=35  Identities=17%  Similarity=0.127  Sum_probs=32.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      |+|.|+| .|.+|..++..|++.|++|++.+| +...
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~-~~~~   37 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDA-DPAA   37 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeC-CHHH
Confidence            6899999 999999999999999999999999 7543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.34  E-value=0.006  Score=45.78  Aligned_cols=70  Identities=26%  Similarity=0.373  Sum_probs=53.3

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEEEec
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVFHVA   87 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi~~a   87 (341)
                      |+|+| .|-+|..+++.|.+.+.+|+++.+ +..   ..+.+..     .++.++.+|.++++.++++ +++++.||-+.
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~-d~~---~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDR-DPE---RVEELRE-----EGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEES-SHH---HHHHHHH-----TTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEc-CCHHHHHHHHHHHhCCCEEEEEEC-CcH---HHHHHHh-----cccccccccchhhhHHhhcCccccCEEEEcc
Confidence            67888 579999999999997779999988 553   3444443     2578999999999988876 46788887774


Q ss_pred             c
Q 019415           88 T   88 (341)
Q Consensus        88 ~   88 (341)
                      .
T Consensus        71 ~   71 (116)
T PF02254_consen   71 D   71 (116)
T ss_dssp             S
T ss_pred             C
Confidence            4

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.33  E-value=0.0038  Score=56.37  Aligned_cols=105  Identities=19%  Similarity=0.269  Sum_probs=69.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc------------------hhhh----hHhhhCCCCCCceEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED------------------KSKV----DLLKSLPGAETRLIF   62 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------------------~~~~----~~~~~~~~~~~~~~~   62 (341)
                      ..+|+|+| .|.+|++++..|+..|. +++++++ +.-.                  ..+.    +.+..+.. .-.++.
T Consensus        24 ~~~VlVvG-~GglGs~va~~La~aGvg~i~lvD~-D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp-~v~v~~  100 (339)
T PRK07688         24 EKHVLIIG-AGALGTANAEMLVRAGVGKVTIVDR-DYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINS-DVRVEA  100 (339)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeC-CccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCC-CcEEEE
Confidence            46899999 59999999999999996 7888876 5311                  0111    22222211 124556


Q ss_pred             EecCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           63 FEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        63 ~~~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +..+++ ++.+.++++++|+||.+...                ...-..+-++|.+.+  ..+|+.++.+
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~Dn----------------~~~r~~ln~~~~~~~--iP~i~~~~~g  151 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATDN----------------FETRFIVNDAAQKYG--IPWIYGACVG  151 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCCC----------------HHHHHHHHHHHHHhC--CCEEEEeeee
Confidence            666764 45677788999999998331                112234667788887  5588877665

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.30  E-value=0.0042  Score=56.03  Aligned_cols=106  Identities=17%  Similarity=0.281  Sum_probs=68.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc------------------hhhh----hHhhhCCCCCCceE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED------------------KSKV----DLLKSLPGAETRLI   61 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------------------~~~~----~~~~~~~~~~~~~~   61 (341)
                      +.++|+|+|+ |-+|+++++.|+..|. +++++++ +.-.                  ..|.    +.+..+.. .-.++
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~-D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp-~v~i~   99 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADR-DYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINS-EVEIV   99 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-CcccccccCccccccHHHccCCccHHHHHHHHHHHHCC-CcEEE
Confidence            3468999995 6699999999999996 7887777 5311                  1122    22333211 12466


Q ss_pred             EEecCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           62 FFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        62 ~~~~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      .+..|++ ++.++++++++|+||.+....                ..-..+-++|.+.+  ..+|+.+..+
T Consensus       100 ~~~~~~~-~~~~~~~~~~~DlVid~~D~~----------------~~r~~in~~~~~~~--ip~i~~~~~g  151 (338)
T PRK12475        100 PVVTDVT-VEELEELVKEVDLIIDATDNF----------------DTRLLINDLSQKYN--IPWIYGGCVG  151 (338)
T ss_pred             EEeccCC-HHHHHHHhcCCCEEEEcCCCH----------------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            6777775 456888899999999985321                11122456777777  4577776654

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.30  E-value=0.0065  Score=55.50  Aligned_cols=116  Identities=10%  Similarity=0.068  Sum_probs=73.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-----eEEE--E--ecCCCCchh--hhhHhhhCCCCCCceEEEecCCCChHHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-----IVHT--T--LRPNLEDKS--KVDLLKSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-----~V~~--~--~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      .-||.|+||+|.+|.+++-.|+..|.     +|.+  +  ++ +.+...  ..+...........+.+..+   +    .
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~-~~~~a~g~a~DL~d~a~~~~~~v~i~~~---~----y  115 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSER-SKEALEGVAMELEDSLYPLLREVSIGID---P----Y  115 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCc-cchhhhHHHHHHHHhhhhhcCceEEecC---C----H
Confidence            46999999999999999999998862     2322  2  44 433311  11111111111123322222   2    4


Q ss_pred             HHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecc
Q 019415           75 NAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTAS  130 (341)
Q Consensus        75 ~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss  130 (341)
                      +.++++|+||-+||...... ....+.+..|+...+.+.....++. .-.++|.+|-
T Consensus       116 ~~~kdaDIVVitAG~prkpg-~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       116 EVFEDADWALLIGAKPRGPG-MERADLLDINGQIFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             HHhCCCCEEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            56779999999999865432 3355889999999999999999953 2345666654

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.29  E-value=0.0016  Score=55.13  Aligned_cols=36  Identities=33%  Similarity=0.453  Sum_probs=32.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      |||.|+||+|.+|+.++..|.+.|++|++.+| +.+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r-~~~~   36 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSR-DLEK   36 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEc-CHHH
Confidence            68999999999999999999999999999988 7644

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.25  E-value=0.0026  Score=60.11  Aligned_cols=74  Identities=24%  Similarity=0.361  Sum_probs=57.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi   84 (341)
                      +++|+|+|+ |.+|+.+++.|.+.|++|+++.+ ++..   .+.+...   ..++.++.+|.++++.+.++ ++++|.||
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~-~~~~---~~~~~~~---~~~~~~i~gd~~~~~~L~~~~~~~a~~vi  302 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIER-DPER---AEELAEE---LPNTLVLHGDGTDQELLEEEGIDEADAFI  302 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHH---HHHHHHH---CCCCeEEECCCCCHHHHHhcCCccCCEEE
Confidence            578999996 99999999999999999999988 6543   3333221   13577899999999888655 46789887


Q ss_pred             Eec
Q 019415           85 HVA   87 (341)
Q Consensus        85 ~~a   87 (341)
                      -+.
T Consensus       303 ~~~  305 (453)
T PRK09496        303 ALT  305 (453)
T ss_pred             ECC
Confidence            553

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.24  E-value=0.0015  Score=58.93  Aligned_cols=95  Identities=19%  Similarity=0.275  Sum_probs=56.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      +++||.|+||||++|..|++.|.+++|   ++..+.. ..+.......        .+......++. +    ..+.++|
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las-~rsaGk~~~~--------~~~~~~v~~~~-~----~~~~~~D   71 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLAS-ARSAGKKVTF--------EGRDYTVEELT-E----DSFDGVD   71 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEc-cCCCCCeeee--------cCceeEEEeCC-H----HHHcCCC
Confidence            468999999999999999999999876   3433333 2111011110        11122222332 2    2346899


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +||.+++...                 ...++..+.+.|  .++|=.|++.
T Consensus        72 ~vf~a~p~~~-----------------s~~~~~~~~~~g--~~VIDlS~~f  103 (344)
T PLN02383         72 IALFSAGGSI-----------------SKKFGPIAVDKG--AVVVDNSSAF  103 (344)
T ss_pred             EEEECCCcHH-----------------HHHHHHHHHhCC--CEEEECCchh
Confidence            9998775432                 223444455556  5788888875

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.24  E-value=0.0012  Score=59.56  Aligned_cols=92  Identities=21%  Similarity=0.261  Sum_probs=56.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEE---EEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVH---TTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      +|+|+||||++|..|++.|.+++|.+.   .+.+ ..+....+.    +    .+......|+.     ...+.++|+||
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as-~~~~g~~~~----~----~~~~~~~~~~~-----~~~~~~~D~v~   66 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLAS-DRSAGRKVT----F----KGKELEVNEAK-----IESFEGIDIAL   66 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEec-cccCCCeee----e----CCeeEEEEeCC-----hHHhcCCCEEE
Confidence            589999999999999999999887654   3345 432211111    1    12344555553     12346899999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      .+++...                 +..++..+.+.| + ++|=.|++.
T Consensus        67 ~a~g~~~-----------------s~~~a~~~~~~G-~-~VID~ss~~   95 (339)
T TIGR01296        67 FSAGGSV-----------------SKEFAPKAAKCG-A-IVIDNTSAF   95 (339)
T ss_pred             ECCCHHH-----------------HHHHHHHHHHCC-C-EEEECCHHH
Confidence            9976432                 223445555566 4 566667654

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.18  E-value=0.0023  Score=58.13  Aligned_cols=33  Identities=24%  Similarity=0.440  Sum_probs=28.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLR   38 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r   38 (341)
                      ++||+|+||||++|++|++.|.+... ++.++.+
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~   36 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAA   36 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEc
Confidence            47999999999999999999998764 8888756

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.18  E-value=0.01  Score=52.71  Aligned_cols=113  Identities=14%  Similarity=0.074  Sum_probs=74.7

Q ss_pred             EEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      |.|+|+ |.+|+.++..|+..|  .+++++++ +..... ....+...........+...  .+    .+.++++|+||.
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~-~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIi   72 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDV-NEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVI   72 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC-CccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEE
Confidence            468885 889999999999988  78999988 665322 11222222111112222221  12    347789999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +|+...... ....+.+..|+...+.+++.+++.+.-..+|.+|-
T Consensus        73 tag~p~~~~-~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          73 TAGAPRKPG-ETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             cCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            999755432 23458888999999999999998873445665554

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.16  E-value=0.0018  Score=52.08  Aligned_cols=57  Identities=21%  Similarity=0.234  Sum_probs=47.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|||+|+++.+|..+++.|.+.|.+|+++.| +.                             +++.+.+..+|+||
T Consensus        43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r-~~-----------------------------~~l~~~l~~aDiVI   92 (168)
T cd01080          43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHS-KT-----------------------------KNLKEHTKQADIVI   92 (168)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEEC-Cc-----------------------------hhHHHHHhhCCEEE
Confidence            4689999998778899999999999999999888 31                             34667888999999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      .+.+...
T Consensus        93 sat~~~~   99 (168)
T cd01080          93 VAVGKPG   99 (168)
T ss_pred             EcCCCCc
Confidence            9987644

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.15  E-value=0.0068  Score=50.36  Aligned_cols=106  Identities=19%  Similarity=0.263  Sum_probs=65.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCch------------------hhh----hHhhhCCCCCCceEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDK------------------SKV----DLLKSLPGAETRLIF   62 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~------------------~~~----~~~~~~~~~~~~~~~   62 (341)
                      ..+|+|+|++| +|+++++.|+..| .++++++. +.-..                  .+.    +.+..+.+ .-.++.
T Consensus        19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~-d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp-~v~i~~   95 (198)
T cd01485          19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDH-RLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNP-NVKLSI   95 (198)
T ss_pred             hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEEC-CcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCC-CCEEEE
Confidence            46899999777 9999999999999 46777765 42110                  011    11222211 124455


Q ss_pred             EecCCCC-hHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           63 FEAEIYD-PDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        63 ~~~Dl~~-~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +..++.+ .+.....++++|+||.+-..                ......+-+.|++.+  ..+|+.++.+
T Consensus        96 ~~~~~~~~~~~~~~~~~~~dvVi~~~d~----------------~~~~~~ln~~c~~~~--ip~i~~~~~G  148 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQKFTLVIATEEN----------------YERTAKVNDVCRKHH--IPFISCATYG  148 (198)
T ss_pred             EecccccchhhHHHHHhCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEEeec
Confidence            5555542 44566778889999977321                111234557788887  4688888766

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.12  E-value=0.00045  Score=56.67  Aligned_cols=81  Identities=30%  Similarity=0.317  Sum_probs=42.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceEE-----E-ecCCCChHHHHHHhc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLIF-----F-EAEIYDPDTFENAIQ   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~-----~-~~Dl~~~~~~~~~~~   78 (341)
                      |||.|+| .|++|..++..|++.|++|++++. +..   +.+.+..-  +-.++++.-     . .+.+.-..++..+++
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~-~~~---~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~   75 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDI-DEE---KVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIK   75 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S--HH---HHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHH
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeC-ChH---HHHHHhhccccccccchhhhhccccccccchhhhhhhhhhh
Confidence            7899998 999999999999999999999988 653   34443331  100111000     0 011111123455566


Q ss_pred             CCCEEEEeccCCcc
Q 019415           79 GCDFVFHVATPLQH   92 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~   92 (341)
                      ++|++|=|.+....
T Consensus        76 ~adv~~I~VpTP~~   89 (185)
T PF03721_consen   76 DADVVFICVPTPSD   89 (185)
T ss_dssp             H-SEEEE----EBE
T ss_pred             ccceEEEecCCCcc
Confidence            78999988875443

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.12  E-value=0.018  Score=44.64  Aligned_cols=105  Identities=21%  Similarity=0.307  Sum_probs=67.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhh----hHhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKV----DLLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~----~~~~~~~~~~~~~~~~~   64 (341)
                      .+||+|+| .|-+|+++++.|+..|. ++++++. +.-.                ..|.    +.+..+.+ .-.+..+.
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~-d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np-~~~v~~~~   78 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDD-DIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINP-DVEVEAIP   78 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEES-SBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHST-TSEEEEEE
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCC-cceeecccccccccccccchhHHHHHHHHHHHHhcC-ceeeeeee
Confidence            36899999 88999999999999996 6777765 3211                0111    11122111 12455666


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      .++ +.+.+.+.++++|+||.+...                ...-..+.+.|++.+  ..+|+.++.+
T Consensus        79 ~~~-~~~~~~~~~~~~d~vi~~~d~----------------~~~~~~l~~~~~~~~--~p~i~~~~~g  127 (135)
T PF00899_consen   79 EKI-DEENIEELLKDYDIVIDCVDS----------------LAARLLLNEICREYG--IPFIDAGVNG  127 (135)
T ss_dssp             SHC-SHHHHHHHHHTSSEEEEESSS----------------HHHHHHHHHHHHHTT---EEEEEEEET
T ss_pred             ccc-ccccccccccCCCEEEEecCC----------------HHHHHHHHHHHHHcC--CCEEEEEeec
Confidence            666 456778888999999998443                112234667888887  5788887764

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=97.10  E-value=0.012  Score=50.45  Aligned_cols=95  Identities=16%  Similarity=0.206  Sum_probs=71.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      +++|||+|||+ =|+.|++.|.+.|++|++.+- .....         +. ...+.++.+-+.+.+.+.+.++  +++.|
T Consensus         2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Sva-t~~g~---------~~-~~~~~v~~G~l~~~~~l~~~l~~~~i~~V   69 (248)
T PRK08057          2 MPRILLLGGTS-EARALARALAAAGVDIVLSLA-GRTGG---------PA-DLPGPVRVGGFGGAEGLAAYLREEGIDLV   69 (248)
T ss_pred             CceEEEEechH-HHHHHHHHHHhCCCeEEEEEc-cCCCC---------cc-cCCceEEECCCCCHHHHHHHHHHCCCCEE
Confidence            57899999987 599999999999998887655 33220         11 2367788888889999999996  68999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEE
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY  127 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~  127 (341)
                      |+..-++.              ...+.++.++|.+.+ ++.+=|
T Consensus        70 IDATHPfA--------------~~is~~a~~ac~~~~-ipyiR~   98 (248)
T PRK08057         70 IDATHPYA--------------AQISANAAAACRALG-IPYLRL   98 (248)
T ss_pred             EECCCccH--------------HHHHHHHHHHHHHhC-CcEEEE
Confidence            99844433              334678899999998 775544

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.10  E-value=0.0088  Score=55.60  Aligned_cols=115  Identities=13%  Similarity=0.130  Sum_probs=72.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC---C--CeE--EEEecCCCCchhhhhH----hhh-CCCCCCceEEEecCCCChHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK---G--YIV--HTTLRPNLEDKSKVDL----LKS-LPGAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~---g--~~V--~~~~r~~~~~~~~~~~----~~~-~~~~~~~~~~~~~Dl~~~~~~   73 (341)
                      .-+|+||||+|+||.+|+-.++.-   |  ..|  ..++. . ....+++-    +.. ......++.+.. |      .
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi-~-~~~~~l~G~amDL~D~a~pll~~v~i~~-~------~  193 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDS-P-ENLEKLKGLVMEVEDLAFPLLRGISVTT-D------L  193 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcC-C-CchhhHHHHHHHHHHhHHhhcCCcEEEE-C------C
Confidence            468999999999999999988873   3  233  33444 1 11121111    111 111122333332 1      2


Q ss_pred             HHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCC-cCEEEEecc
Q 019415           74 ENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGT-VKRLIYTAS  130 (341)
Q Consensus        74 ~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~~I~~Ss  130 (341)
                      .+.++++|+||-+||...... ....+.++.|+.....+.++..+.+. -.+++.+.|
T Consensus       194 ~ea~~daDvvIitag~prk~G-~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         194 DVAFKDAHVIVLLDDFLIKEG-EDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             HHHhCCCCEEEECCCCCCCcC-CCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence            467889999999999765432 33558899999999999999999883 145555553

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.08  E-value=0.0021  Score=51.01  Aligned_cols=76  Identities=16%  Similarity=0.174  Sum_probs=50.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +.++|+|+|+ |.+|..+++.|.+.| ++|++.+| +..+.....  ....     ...+..+..+   ..+.++++|+|
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r-~~~~~~~~~--~~~~-----~~~~~~~~~~---~~~~~~~~Dvv   85 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNR-TLEKAKALA--ERFG-----ELGIAIAYLD---LEELLAEADLI   85 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcC-CHHHHHHHH--HHHh-----hcccceeecc---hhhccccCCEE
Confidence            4579999996 999999999999996 88999988 654322211  1111     0001122333   33447889999


Q ss_pred             EEeccCCcc
Q 019415           84 FHVATPLQH   92 (341)
Q Consensus        84 i~~a~~~~~   92 (341)
                      |.+......
T Consensus        86 i~~~~~~~~   94 (155)
T cd01065          86 INTTPVGMK   94 (155)
T ss_pred             EeCcCCCCC
Confidence            999887654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.05  E-value=0.012  Score=49.02  Aligned_cols=105  Identities=24%  Similarity=0.311  Sum_probs=65.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhhh----HhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKVD----LLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~----~~~~~~~~~~~~~~~~   64 (341)
                      ..+|+|+| .|-+|+++++.|+..|. +++++++ +.-.                ..|.+    .+..+.+ .-.++.+.
T Consensus        21 ~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~-d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~i~~~~   97 (202)
T TIGR02356        21 NSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDD-DHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNS-DIQVTALK   97 (202)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecC-CEEcccchhhhhccChhhCCChHHHHHHHHHHHhCC-CCEEEEeh
Confidence            46899999 88999999999999995 7888776 5211                11111    2222211 11333344


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ..+ +++.+.+.++++|+||.+....                ..-..+-+.|++.+  ..+|+.++.+
T Consensus        98 ~~i-~~~~~~~~~~~~D~Vi~~~d~~----------------~~r~~l~~~~~~~~--ip~i~~~~~g  146 (202)
T TIGR02356        98 ERV-TAENLELLINNVDLVLDCTDNF----------------ATRYLINDACVALG--TPLISAAVVG  146 (202)
T ss_pred             hcC-CHHHHHHHHhCCCEEEECCCCH----------------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            444 3456778889999999985321                11223567788877  5688877654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.03  E-value=0.0025  Score=55.87  Aligned_cols=54  Identities=13%  Similarity=0.199  Sum_probs=45.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|+|+|++|.+|+.++..|++.|.+|+++.| +.                             .++.+.++++|+||
T Consensus       158 ~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~-~t-----------------------------~~L~~~~~~aDIvI  207 (283)
T PRK14192        158 AGKHAVVVGRSAILGKPMAMMLLNANATVTICHS-RT-----------------------------QNLPELVKQADIIV  207 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC-Cc-----------------------------hhHHHHhccCCEEE
Confidence            5689999999999999999999999999988766 21                             23555667899999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      ++.+
T Consensus       208 ~AtG  211 (283)
T PRK14192        208 GAVG  211 (283)
T ss_pred             EccC
Confidence            9986

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.98  E-value=0.0011  Score=52.94  Aligned_cols=78  Identities=23%  Similarity=0.270  Sum_probs=47.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEec
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVA   87 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~a   87 (341)
                      ||.|+| +|..|.+++..|.++|++|++..| +......+..-.......+++..-. .+.-..+++++++++|+||-+.
T Consensus         1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~-~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~Iiiav   77 (157)
T PF01210_consen    1 KIAVIG-AGNWGTALAALLADNGHEVTLWGR-DEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAV   77 (157)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHCTEEEEEETS-CHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCEEEEEec-cHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEecc
Confidence            689999 899999999999999999999999 6533222222211111112221111 2211245778889999998664


Q ss_pred             c
Q 019415           88 T   88 (341)
Q Consensus        88 ~   88 (341)
                      .
T Consensus        78 P   78 (157)
T PF01210_consen   78 P   78 (157)
T ss_dssp             -
T ss_pred             c
Confidence            4

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.97  E-value=0.0043  Score=56.14  Aligned_cols=76  Identities=25%  Similarity=0.176  Sum_probs=51.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~   79 (341)
                      ++++|||.||+|-+|+..++.+...| ..|++ ++ +.+..+..+.+..         -...|..+++..+...+    +
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t-~~-s~e~~~l~k~lGA---------d~vvdy~~~~~~e~~kk~~~~~  225 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVT-AC-SKEKLELVKKLGA---------DEVVDYKDENVVELIKKYTGKG  225 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEE-Ec-ccchHHHHHHcCC---------cEeecCCCHHHHHHHHhhcCCC
Confidence            56799999999999999999988888 45544 45 4444333333322         13456666655554444    5


Q ss_pred             CCEEEEeccCCc
Q 019415           80 CDFVFHVATPLQ   91 (341)
Q Consensus        80 ~d~Vi~~a~~~~   91 (341)
                      .|+|++|++...
T Consensus       226 ~DvVlD~vg~~~  237 (347)
T KOG1198|consen  226 VDVVLDCVGGST  237 (347)
T ss_pred             ccEEEECCCCCc
Confidence            999999998753

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.97  E-value=0.0039  Score=55.11  Aligned_cols=101  Identities=19%  Similarity=0.277  Sum_probs=56.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCC-CchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNL-EDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++||.|.||+|+-|..|++.|+.+. .++...+. +. ..+...+....+.    +..-......+++.+  ..++||+|
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss-~~~~g~~~~~~~p~l~----g~~~l~~~~~~~~~~--~~~~~Dvv   74 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISS-RERAGKPVSDVHPNLR----GLVDLPFQTIDPEKI--ELDECDVV   74 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeec-hhhcCCchHHhCcccc----cccccccccCChhhh--hcccCCEE
Confidence            5799999999999999999999985 46655443 22 2211111111111    111111111222222  34569999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |.+-....                 ...++......+  .++|=+|++.
T Consensus        75 FlalPhg~-----------------s~~~v~~l~~~g--~~VIDLSadf  104 (349)
T COG0002          75 FLALPHGV-----------------SAELVPELLEAG--CKVIDLSADF  104 (349)
T ss_pred             EEecCchh-----------------HHHHHHHHHhCC--CeEEECCccc
Confidence            88854322                 234555555555  3488888875

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.96  E-value=0.0013  Score=52.82  Aligned_cols=66  Identities=26%  Similarity=0.295  Sum_probs=44.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ||+|.++| .|-+|+.+++.|++.||+|++.+| +.+   +.+.+...     +.+.       .++..++.+++|+||-
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~-~~~---~~~~~~~~-----g~~~-------~~s~~e~~~~~dvvi~   63 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDR-SPE---KAEALAEA-----GAEV-------ADSPAEAAEQADVVIL   63 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEES-SHH---HHHHHHHT-----TEEE-------ESSHHHHHHHBSEEEE
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeecc-chh---hhhhhHHh-----hhhh-------hhhhhhHhhcccceEe
Confidence            57999999 799999999999999999999998 653   33333331     2111       2235566667799988


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        64 ~v~   66 (163)
T PF03446_consen   64 CVP   66 (163)
T ss_dssp             -SS
T ss_pred             ecc
Confidence            744

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=96.93  E-value=0.02  Score=50.76  Aligned_cols=111  Identities=22%  Similarity=0.117  Sum_probs=72.8

Q ss_pred             EecCcchHHHHHHHHHHHCCC--eEEEEecCCCCch-hhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415           11 VTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDK-SKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus        11 I~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+| .|.||++++..|+..+.  ++..+++ +.... .....+.. .......+++..+   +    .+.++++|+||-+
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di-~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~daDivVit   71 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDI-NKDKAEGEAMDLQHAASFLPTPKKIRSG---D----YSDCKDADLVVIT   71 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeC-CCChhhHHHHHHHHhhcccCCCeEEecC---C----HHHHCCCCEEEEC
Confidence            456 59999999999998873  6888877 65421 11122222 1111123333322   2    3577799999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ||...... ....+.++.|+.-.+.+.+.+.+++.-..+|.+|-.
T Consensus        72 ag~~rk~g-~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP  115 (299)
T TIGR01771        72 AGAPQKPG-ETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNP  115 (299)
T ss_pred             CCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            99755432 234588999999999999999988744566666654

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.93  E-value=0.003  Score=63.63  Aligned_cols=164  Identities=15%  Similarity=0.077  Sum_probs=107.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeE-EEEecCCCCchhhhhHhhhCCCCCC--ceEEEecCCCChHHHHHHhcC----
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIV-HTTLRPNLEDKSKVDLLKSLPGAET--RLIFFEAEIYDPDTFENAIQG----   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~----   79 (341)
                      +..+|+||-|-.|-+|++.|.++|.+- ...+| +.-+ .-.+.+.-..+...  .+.+-.-|++..+.-..+++.    
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSR-sGir-tGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl 1846 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSR-SGIR-TGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL 1846 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEecc-ccch-hhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc
Confidence            579999999999999999999999764 44566 4433 22222221112222  344455677776666666653    


Q ss_pred             --CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           80 --CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        80 --~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                        +--|||+|+......     ...+++.-+.-+.+|.++=...++. .-.+.||.+||.. .+.. ..           
T Consensus      1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvs-cGRG-N~----------- 1913 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVS-CGRG-NA----------- 1913 (2376)
T ss_pred             ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeec-ccCC-CC-----------
Confidence              568899998654321     3344556666788888886666554 2267999999986 3321 21           


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCce
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVV  200 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v  200 (341)
                                     ..+-||.+...+|+++.+-...|++-+.+--|.|
T Consensus      1914 ---------------GQtNYG~aNS~MERiceqRr~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1914 ---------------GQTNYGLANSAMERICEQRRHEGFPGTAIQWGAI 1947 (2376)
T ss_pred             ---------------cccccchhhHHHHHHHHHhhhcCCCcceeeeecc
Confidence                           2467999999999999876555887777765543

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.92  E-value=0.0025  Score=58.51  Aligned_cols=33  Identities=30%  Similarity=0.412  Sum_probs=31.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .++|.|+||.|.+|..+++.|.+.|++|++.+|
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~  130 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQ  130 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCC
Confidence            478999999999999999999999999999887

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.92  E-value=0.0069  Score=54.89  Aligned_cols=32  Identities=25%  Similarity=0.478  Sum_probs=27.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC-CeEEEEec
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLR   38 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r   38 (341)
                      +||.|+||+|++|++|++.|.+.+ .+|..+.+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence            589999999999999999998876 58877744

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=96.91  E-value=0.0048  Score=55.43  Aligned_cols=94  Identities=14%  Similarity=0.196  Sum_probs=56.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC---CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG---YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +++|.|+||||++|..|++.|.++.   .++..+.. ..+....+.    +.+  ..+.+.  ++.+     ..+.++|+
T Consensus         4 ~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS-~~saG~~~~----~~~--~~~~v~--~~~~-----~~~~~~Dv   69 (336)
T PRK08040          4 GWNIALLGATGAVGEALLELLAERQFPVGELYALAS-EESAGETLR----FGG--KSVTVQ--DAAE-----FDWSQAQL   69 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc-cCcCCceEE----ECC--cceEEE--eCch-----hhccCCCE
Confidence            4899999999999999999999953   35665544 322211111    111  112222  2211     12357899


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ||.+++...                 ...++..+.+.|  .++|=.|+..
T Consensus        70 vf~a~p~~~-----------------s~~~~~~~~~~g--~~VIDlS~~f  100 (336)
T PRK08040         70 AFFVAGREA-----------------SAAYAEEATNAG--CLVIDSSGLF  100 (336)
T ss_pred             EEECCCHHH-----------------HHHHHHHHHHCC--CEEEECChHh
Confidence            988864321                 334555566666  5688888875

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.87  E-value=0.016  Score=48.15  Aligned_cols=104  Identities=18%  Similarity=0.228  Sum_probs=62.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhh----hHhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKV----DLLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~----~~~~~~~~~~~~~~~~~   64 (341)
                      ..+|+|+|++| +|+++++.|+..|. ++++++. +.-.                +.|.    +.+..+.+. -.++.+.
T Consensus        21 ~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~-d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~-v~i~~~~   97 (197)
T cd01492          21 SARILLIGLKG-LGAEIAKNLVLSGIGSLTILDD-RTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR-VKVSVDT   97 (197)
T ss_pred             hCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEEC-CcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCC-CEEEEEe
Confidence            46899999766 99999999999995 5777654 3221                0111    112232211 1344444


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ..+.  +...+.++++|+||.+...                ......+-+.|++.+ + .+|+.++.+
T Consensus        98 ~~~~--~~~~~~~~~~dvVi~~~~~----------------~~~~~~ln~~c~~~~-i-p~i~~~~~G  145 (197)
T cd01492          98 DDIS--EKPEEFFSQFDVVVATELS----------------RAELVKINELCRKLG-V-KFYATGVHG  145 (197)
T ss_pred             cCcc--ccHHHHHhCCCEEEECCCC----------------HHHHHHHHHHHHHcC-C-CEEEEEecC
Confidence            4444  2245567889999977332                111233457788887 4 578887765

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.86  E-value=0.0054  Score=56.35  Aligned_cols=68  Identities=18%  Similarity=0.211  Sum_probs=52.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +++|+|+|| |.+|+.++..+.+.|++|++++. +... . ...+        .-+++.+|..|.+.+.++.+.+|+|..
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~-~~~~-p-a~~~--------ad~~~~~~~~D~~~l~~~a~~~dvit~   69 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDP-DPDS-P-AAQV--------ADEVIVADYDDVAALRELAEQCDVITY   69 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC-CCCC-c-hhHh--------CceEEecCCCCHHHHHHHHhcCCEEEe
Confidence            468999995 89999999999999999999877 5433 1 1111        123566889999999999999998754

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.84  E-value=0.0058  Score=53.84  Aligned_cols=81  Identities=12%  Similarity=0.105  Sum_probs=50.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhh-CCCC-CCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKS-LPGA-ETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      +++++||+|+.|- +++++-.|...|. +|+++.| +....++.+.+.. +... ...+.+  .++.+.+.+...+.++|
T Consensus       123 ~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nR-t~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~~~aD  198 (288)
T PRK12749        123 KGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNR-RDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEALASAD  198 (288)
T ss_pred             CCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeC-CccHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhcccCC
Confidence            4578999997555 9999999999984 8999999 7542234444432 1111 111222  22323333555667899


Q ss_pred             EEEEeccC
Q 019415           82 FVFHVATP   89 (341)
Q Consensus        82 ~Vi~~a~~   89 (341)
                      +|||+-..
T Consensus       199 ivINaTp~  206 (288)
T PRK12749        199 ILTNGTKV  206 (288)
T ss_pred             EEEECCCC
Confidence            99997643

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.83  E-value=0.0065  Score=53.89  Aligned_cols=82  Identities=12%  Similarity=0.142  Sum_probs=53.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      +++|.|+||||++|..|++.|.++.+ ++..+.. +...                      ++.+   ....+.++|+||
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s-~~~~----------------------~~~~---~~~~~~~~DvvF   55 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPE-AKRK----------------------DAAA---RRELLNAADVAI   55 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEec-CCCC----------------------cccC---chhhhcCCCEEE
Confidence            57899999999999999999999863 5555444 2211                      1111   223456789888


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      .+.....                 ...++..+.+.|  .++|=.|++.
T Consensus        56 lalp~~~-----------------s~~~~~~~~~~g--~~VIDlSadf   84 (313)
T PRK11863         56 LCLPDDA-----------------AREAVALIDNPA--TRVIDASTAH   84 (313)
T ss_pred             ECCCHHH-----------------HHHHHHHHHhCC--CEEEECChhh
Confidence            7753211                 234445555556  5788888875

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.80  E-value=0.0033  Score=56.60  Aligned_cols=78  Identities=17%  Similarity=0.184  Sum_probs=48.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCC---CCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLP---GAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ||+|.|+| .|.+|..++..|++.|++|++++| +...   .+.+....   ....+... ...+....+..+.++++|+
T Consensus         1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r-~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~   74 (325)
T PRK00094          1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWAR-DPEQ---AAEINADRENPRYLPGIKL-PDNLRATTDLAEALADADL   74 (325)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEEC-CHHH---HHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCE
Confidence            36899999 699999999999999999999999 6533   22222210   00001100 0011112234556778999


Q ss_pred             EEEeccC
Q 019415           83 VFHVATP   89 (341)
Q Consensus        83 Vi~~a~~   89 (341)
                      ||-+...
T Consensus        75 vi~~v~~   81 (325)
T PRK00094         75 ILVAVPS   81 (325)
T ss_pred             EEEeCCH
Confidence            9988653

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=96.79  E-value=0.0073  Score=51.53  Aligned_cols=117  Identities=19%  Similarity=0.136  Sum_probs=73.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecC--CCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRP--NLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +-||.|+||.|-||+.|...|. ....|.-+.-=  .... ....   ++-  |-+-.-.....+-++.++++++++|+|
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~-GVaa---DlS--HI~T~s~V~g~~g~~~L~~al~~advV  100 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTP-GVAA---DLS--HINTNSSVVGFTGADGLENALKGADVV  100 (345)
T ss_pred             cceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCC-cccc---ccc--ccCCCCceeccCChhHHHHHhcCCCEE
Confidence            3589999999999999996555 44444433210  1000 0000   000  011112233444567899999999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |=-||...-.. .-.++++.+|..-...+..++.+.-.-..+.++|-
T Consensus       101 vIPAGVPRKPG-MTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  101 VIPAGVPRKPG-MTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             EecCCCCCCCC-CcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence            99999766443 22468999999999999999888742344555543

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.79  E-value=0.034  Score=49.48  Aligned_cols=112  Identities=18%  Similarity=0.090  Sum_probs=70.7

Q ss_pred             EEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHh---hhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLL---KSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      |.|+|| |.+|..++..|+..|. +|+++++ +.... +...+   ...........+...  .|   + +.++++|+||
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di-~e~~~-~g~~~dl~~~~~~~~~~~~I~~t--~d---~-~~l~dADiVI   71 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDI-VEGLP-QGKALDISQAAPILGSDTKVTGT--ND---Y-EDIAGSDVVV   71 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeC-CCcHH-HHHHHHHHHhhhhcCCCeEEEEc--CC---H-HHhCCCCEEE
Confidence            568997 9999999999998876 9999988 75432 21111   111111111222210  12   2 3478999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      .+++....... ...+.+..|+...+.+++.+.+...-..+|.+|-
T Consensus        72 it~g~p~~~~~-~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN  116 (300)
T cd01339          72 ITAGIPRKPGM-SRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN  116 (300)
T ss_pred             EecCCCCCcCC-CHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            99987554332 2335667789989999998888763345565554

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.75  E-value=0.018  Score=54.40  Aligned_cols=79  Identities=16%  Similarity=0.023  Sum_probs=52.4

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch-hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK-SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |.. .+++|+|+|++| +|.+.++.|++.|++|++.++ +.... .....+...     ++.+..+..  +..   .+. 
T Consensus         1 ~~~-~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~-~~~~~~~~~~~l~~~-----g~~~~~~~~--~~~---~~~~   67 (447)
T PRK02472          1 TEY-QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDG-KPFSENPEAQELLEE-----GIKVICGSH--PLE---LLDE   67 (447)
T ss_pred             CCc-CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcC-CCccchhHHHHHHhc-----CCEEEeCCC--CHH---HhcC
Confidence            443 467899999988 999999999999999999877 54321 122223321     445544332  222   233 


Q ss_pred             CCCEEEEeccCCcc
Q 019415           79 GCDFVFHVATPLQH   92 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~   92 (341)
                      ++|.||..+|+...
T Consensus        68 ~~d~vV~s~gi~~~   81 (447)
T PRK02472         68 DFDLMVKNPGIPYT   81 (447)
T ss_pred             cCCEEEECCCCCCC
Confidence            48999999987654

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.74  E-value=0.0042  Score=58.23  Aligned_cols=68  Identities=25%  Similarity=0.446  Sum_probs=46.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+|+|+||+|.+|..+++.|.+.|++|++++| +.....  ......     ++.+       ..+..+.+.++|+||-+
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r-~~~~~~--~~a~~~-----gv~~-------~~~~~e~~~~aDvVIla   65 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGR-DPKKGK--EVAKEL-----GVEY-------ANDNIDAAKDADIVIIS   65 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEEC-ChHHHH--HHHHHc-----CCee-------ccCHHHHhccCCEEEEe
Confidence            68999999999999999999999999999999 653311  111111     2211       11244556778988887


Q ss_pred             ccC
Q 019415           87 ATP   89 (341)
Q Consensus        87 a~~   89 (341)
                      ...
T Consensus        66 vp~   68 (437)
T PRK08655         66 VPI   68 (437)
T ss_pred             cCH
Confidence            653

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.72  E-value=0.0081  Score=53.23  Aligned_cols=69  Identities=20%  Similarity=0.238  Sum_probs=50.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+| .|.+|+.++..|...|.+|++++| +...   .......     +.+++     ..+++.+.++++|+||
T Consensus       151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r-~~~~---~~~~~~~-----G~~~~-----~~~~l~~~l~~aDiVI  215 (296)
T PRK08306        151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGAR-KSAH---LARITEM-----GLSPF-----HLSELAEEVGKIDIIF  215 (296)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHc-----CCeee-----cHHHHHHHhCCCCEEE
Confidence            368999999 588999999999999999999999 6433   2222221     22222     2245677888999999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      +++.
T Consensus       216 ~t~p  219 (296)
T PRK08306        216 NTIP  219 (296)
T ss_pred             ECCC
Confidence            9853

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.72  E-value=0.0078  Score=56.36  Aligned_cols=75  Identities=16%  Similarity=0.164  Sum_probs=53.2

Q ss_pred             CCcEEEEecC----------------cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC
Q 019415            5 SNFKVCVTGG----------------EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   68 (341)
                      +++|||||+|                ||.+|.+|++.+..+|.+|+.+.- ...       +    ..+.+++++.++  
T Consensus       255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~G-p~~-------~----~~p~~v~~i~V~--  320 (475)
T PRK13982        255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISG-PVD-------L----ADPQGVKVIHVE--  320 (475)
T ss_pred             CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeC-CcC-------C----CCCCCceEEEec--
Confidence            5789999986                799999999999999999999865 211       0    112356666544  


Q ss_pred             ChHHHHHHhc---CCCEEEEeccCCccc
Q 019415           69 DPDTFENAIQ---GCDFVFHVATPLQHI   93 (341)
Q Consensus        69 ~~~~~~~~~~---~~d~Vi~~a~~~~~~   93 (341)
                      ..+++.+++.   ..|++|++|+.....
T Consensus       321 ta~eM~~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        321 SARQMLAAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             CHHHHHHHHHhhCCCCEEEEecccccee
Confidence            4444444432   379999999976654

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.70  E-value=0.0056  Score=49.98  Aligned_cols=69  Identities=14%  Similarity=0.110  Sum_probs=47.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+| .|-||+.+++.|..-|.+|++.+| ......   .....     .+        ...+++++++.+|+|+
T Consensus        35 ~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~-~~~~~~---~~~~~-----~~--------~~~~l~ell~~aDiv~   96 (178)
T PF02826_consen   35 RGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDR-SPKPEE---GADEF-----GV--------EYVSLDELLAQADIVS   96 (178)
T ss_dssp             TTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEES-SCHHHH---HHHHT-----TE--------EESSHHHHHHH-SEEE
T ss_pred             CCCEEEEEE-EcCCcCeEeeeeecCCceeEEecc-cCChhh---hcccc-----cc--------eeeehhhhcchhhhhh
Confidence            468999999 899999999999999999999998 654311   11110     11        1224677888899988


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      .+.....
T Consensus        97 ~~~plt~  103 (178)
T PF02826_consen   97 LHLPLTP  103 (178)
T ss_dssp             E-SSSST
T ss_pred             hhhcccc
Confidence            8876544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.68  E-value=0.0085  Score=52.80  Aligned_cols=69  Identities=22%  Similarity=0.275  Sum_probs=49.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+| .|.+|+.+++.|...|.+|++..| +...   .......     +...+     ..+++.+.++++|+||
T Consensus       150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R-~~~~---~~~~~~~-----g~~~~-----~~~~l~~~l~~aDiVi  214 (287)
T TIGR02853       150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGAR-SSAD---LARITEM-----GLIPF-----PLNKLEEKVAEIDIVI  214 (287)
T ss_pred             CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHC-----CCeee-----cHHHHHHHhccCCEEE
Confidence            457999999 588999999999999999999999 6532   2222111     11111     2345777888999999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      ++..
T Consensus       215 nt~P  218 (287)
T TIGR02853       215 NTIP  218 (287)
T ss_pred             ECCC
Confidence            9863

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.68  E-value=0.0062  Score=54.84  Aligned_cols=112  Identities=24%  Similarity=0.191  Sum_probs=67.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceEEE-ecC-----CCChHHHHHHhc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLIFF-EAE-----IYDPDTFENAIQ   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~-~~D-----l~~~~~~~~~~~   78 (341)
                      |||.|+| +||+|-.....|++.||+|++++. +.   .+.+.+...  |-.+++++-+ +-+     +.-.-+++++++
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDi-d~---~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~   75 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDI-DE---SKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVK   75 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeC-CH---HHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHh
Confidence            7899999 999999999999999999999988 55   445544431  2122222111 001     111234677788


Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ..|++|=+.+......       -..++.....+++...+...-+++|.+=|
T Consensus        76 ~adv~fIavgTP~~~d-------g~aDl~~V~ava~~i~~~~~~~~vvV~KS  120 (414)
T COG1004          76 DADVVFIAVGTPPDED-------GSADLSYVEAVAKDIGEILDGKAVVVIKS  120 (414)
T ss_pred             cCCEEEEEcCCCCCCC-------CCccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence            8899988877544322       12235555566666555542224544444

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.67  E-value=0.037  Score=47.09  Aligned_cols=105  Identities=24%  Similarity=0.344  Sum_probs=64.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhhh----HhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKVD----LLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~----~~~~~~~~~~~~~~~~   64 (341)
                      ..+|+|+| .|-+|+++++.|+..|. ++++++. +.-.                ..|.+    .+..+.+ .-.++.+.
T Consensus        21 ~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~-D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~i~~~~   97 (228)
T cd00757          21 NARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDD-DVVELSNLQRQILHTEADVGQPKAEAAAERLRAINP-DVEIEAYN   97 (228)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC-CEEcCcccccccccChhhCCChHHHHHHHHHHHhCC-CCEEEEec
Confidence            46899999 88899999999999995 5665543 2211                11111    1222211 12455555


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      .++ +.+.+.+.++++|+||.+.....                .-..+-++|.+.+  ..+|+.+..+
T Consensus        98 ~~i-~~~~~~~~~~~~DvVi~~~d~~~----------------~r~~l~~~~~~~~--ip~i~~g~~g  146 (228)
T cd00757          98 ERL-DAENAEELIAGYDLVLDCTDNFA----------------TRYLINDACVKLG--KPLVSGAVLG  146 (228)
T ss_pred             cee-CHHHHHHHHhCCCEEEEcCCCHH----------------HHHHHHHHHHHcC--CCEEEEEecc
Confidence            555 34667788889999999855321                1134667788877  5677776554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.67  E-value=0.0061  Score=54.46  Aligned_cols=33  Identities=24%  Similarity=0.178  Sum_probs=30.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .+|+|.|+| +|.+|+.++..|.+.||+|++..|
T Consensus         3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r   35 (308)
T PRK14619          3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSR   35 (308)
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeC
Confidence            458999998 899999999999999999999988

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.67  E-value=0.01  Score=54.43  Aligned_cols=75  Identities=20%  Similarity=0.201  Sum_probs=54.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ..+|+|+|+ |-+|...++.|...|.+|++++| +..+   .+.+...-.   .  .+..+..+++.+.+.+.++|+||+
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~-~~~~---~~~l~~~~g---~--~v~~~~~~~~~l~~~l~~aDvVI~  236 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDI-NIDR---LRQLDAEFG---G--RIHTRYSNAYEIEDAVKRADLLIG  236 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEEC-CHHH---HHHHHHhcC---c--eeEeccCCHHHHHHHHccCCEEEE
Confidence            467999985 99999999999999999999988 6543   222222110   1  123345567788889999999999


Q ss_pred             eccCC
Q 019415           86 VATPL   90 (341)
Q Consensus        86 ~a~~~   90 (341)
                      ++...
T Consensus       237 a~~~~  241 (370)
T TIGR00518       237 AVLIP  241 (370)
T ss_pred             ccccC
Confidence            98653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.67  E-value=0.045  Score=47.07  Aligned_cols=105  Identities=19%  Similarity=0.255  Sum_probs=64.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhhh----HhhhCCCCCCceEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKVD----LLKSLPGAETRLIFF   63 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~----~~~~~~~~~~~~~~~   63 (341)
                      +..+|+|+|+ |-+|+++++.|+..|. ++++++. +.-.                ..|.+    .+..+.. .-.++.+
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~-D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp-~v~i~~~  107 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDF-DTVSLSNLQRQVLHDDATIGQPKVESARAALARINP-HIAIETI  107 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC-CEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCC-CCEEEEE
Confidence            3469999996 9999999999999994 6666654 3211                01111    2222211 1245555


Q ss_pred             ecCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           64 EAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        64 ~~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ...++ ++.+.+.++++|+||.+....                ..-..+-++|.+.+  ..+|+.++.
T Consensus       108 ~~~i~-~~~~~~~~~~~DiVi~~~D~~----------------~~r~~ln~~~~~~~--ip~v~~~~~  156 (245)
T PRK05690        108 NARLD-DDELAALIAGHDLVLDCTDNV----------------ATRNQLNRACFAAK--KPLVSGAAI  156 (245)
T ss_pred             eccCC-HHHHHHHHhcCCEEEecCCCH----------------HHHHHHHHHHHHhC--CEEEEeeec
Confidence            55554 455677888999999995321                11224567777877  557775554

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.65  E-value=0.021  Score=48.62  Aligned_cols=34  Identities=32%  Similarity=0.396  Sum_probs=28.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEE-Eec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHT-TLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~-~~r   38 (341)
                      ++|||.|.|++|-+|+.+++.+.+.+ .++.+ +.|
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~   36 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDR   36 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEec
Confidence            36899999999999999999999885 56544 556

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.64  E-value=0.0087  Score=52.26  Aligned_cols=57  Identities=18%  Similarity=0.161  Sum_probs=47.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+|+++.+|+.++..|.+.|..|+++.+ +.                             ..+.+.++++|+||
T Consensus       157 ~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s-~t-----------------------------~~l~~~~~~ADIVI  206 (286)
T PRK14175        157 EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS-RS-----------------------------KDMASYLKDADVIV  206 (286)
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC-Cc-----------------------------hhHHHHHhhCCEEE
Confidence            5689999999999999999999999999999866 21                             23667788899999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      .+++...
T Consensus       207 sAvg~p~  213 (286)
T PRK14175        207 SAVGKPG  213 (286)
T ss_pred             ECCCCCc
Confidence            9988654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.64  E-value=0.0074  Score=53.07  Aligned_cols=74  Identities=15%  Similarity=0.259  Sum_probs=49.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +++++||+|+ |-+|+.++..|.+.| .+|+++.| +..+.   +.+.. +... ..+.+   ++    +..+.+.++|+
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R-~~~~a---~~l~~~~~~~-~~~~~---~~----~~~~~~~~~Di  188 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNR-TVERA---EELAKLFGAL-GKAEL---DL----ELQEELADFDL  188 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeC-CHHHH---HHHHHHhhhc-cceee---cc----cchhccccCCE
Confidence            4578999995 999999999999999 79999999 76432   22222 1111 01222   11    23355678999


Q ss_pred             EEEeccCCc
Q 019415           83 VFHVATPLQ   91 (341)
Q Consensus        83 Vi~~a~~~~   91 (341)
                      ||++.....
T Consensus       189 vInaTp~g~  197 (278)
T PRK00258        189 IINATSAGM  197 (278)
T ss_pred             EEECCcCCC
Confidence            999986544

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.63  E-value=0.011  Score=53.18  Aligned_cols=98  Identities=26%  Similarity=0.357  Sum_probs=57.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHH-CCCe---EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLD-KGYI---VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      |+.. .++|.|+||||++|+.+++.|.+ ...+   +..+.. ..+.....    .+..  ..+.+...   +++.    
T Consensus         1 ~~~~-~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS-~~saGk~~----~~~~--~~l~v~~~---~~~~----   65 (347)
T PRK06728          1 MSEK-GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS-KRSAGKTV----QFKG--REIIIQEA---KINS----   65 (347)
T ss_pred             CCCC-CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC-cccCCCCe----eeCC--cceEEEeC---CHHH----
Confidence            4433 47999999999999999999996 4555   555544 22221111    1111  12333322   2332    


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ++++|+||.+++...                 ...++..+.+.|  ..+|=.||..
T Consensus        66 ~~~~Divf~a~~~~~-----------------s~~~~~~~~~~G--~~VID~Ss~f  102 (347)
T PRK06728         66 FEGVDIAFFSAGGEV-----------------SRQFVNQAVSSG--AIVIDNTSEY  102 (347)
T ss_pred             hcCCCEEEECCChHH-----------------HHHHHHHHHHCC--CEEEECchhh
Confidence            357899998874321                 334555566666  5677788865

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=96.62  E-value=0.019  Score=53.53  Aligned_cols=36  Identities=17%  Similarity=0.088  Sum_probs=32.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      +|+|.|+| .|++|..++..|++.|++|++++| +...
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~-~~~~   38 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDI-NQHA   38 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeC-CHHH
Confidence            47899998 899999999999999999999998 6644

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=96.62  E-value=0.027  Score=48.47  Aligned_cols=97  Identities=21%  Similarity=0.317  Sum_probs=68.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      |+|||+|||+ =|+.|+..|.+.|+ |++.+- ....    ..+..  .......++.+-+.+.+.+.+.++  +++.||
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~-t~~g----~~~~~--~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vI   71 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVA-TSYG----GELLK--PELPGLEVRVGRLGDEEGLAEFLRENGIDAVI   71 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEE-hhhh----Hhhhc--cccCCceEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            7999999986 59999999999998 655332 1111    11110  112367788888889999999996  799999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEE
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY  127 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~  127 (341)
                      +..-++.              ...+.|+.++|++.+ ++.+-|
T Consensus        72 DATHPfA--------------~~is~na~~a~~~~~-ipylR~   99 (249)
T PF02571_consen   72 DATHPFA--------------AEISQNAIEACRELG-IPYLRF   99 (249)
T ss_pred             ECCCchH--------------HHHHHHHHHHHhhcC-cceEEE
Confidence            9844332              233678999999998 775543

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.61  E-value=0.017  Score=43.88  Aligned_cols=31  Identities=29%  Similarity=0.539  Sum_probs=27.0

Q ss_pred             EEEEecCcchHHHHHHHHHHHC-CCeEEEE-ec
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDK-GYIVHTT-LR   38 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r   38 (341)
                      ||.|+|++|.+|..+++.|.+. ++++.++ .|
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~   33 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAAS   33 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEec
Confidence            5889999999999999999995 7888877 44

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.59  E-value=0.022  Score=49.85  Aligned_cols=102  Identities=18%  Similarity=0.173  Sum_probs=67.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+|+.| +|+--++.-..-|++|+++++ ...  ++.+.+..+     +.+.+..-..|++-.+++.+..|.++
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~-~~~--kkeea~~~L-----GAd~fv~~~~d~d~~~~~~~~~dg~~  251 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVIST-SSK--KKEEAIKSL-----GADVFVDSTEDPDIMKAIMKTTDGGI  251 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeC-Cch--hHHHHHHhc-----CcceeEEecCCHHHHHHHHHhhcCcc
Confidence            468999999999 998888777777999999988 432  344444444     33334333447777777777777777


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |++.......              ...+++.++..|   ++|+++-..
T Consensus       252 ~~v~~~a~~~--------------~~~~~~~lk~~G---t~V~vg~p~  282 (360)
T KOG0023|consen  252 DTVSNLAEHA--------------LEPLLGLLKVNG---TLVLVGLPE  282 (360)
T ss_pred             eeeeeccccc--------------hHHHHHHhhcCC---EEEEEeCcC
Confidence            7765432111              123556666655   788887654

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.59  E-value=0.039  Score=46.37  Aligned_cols=105  Identities=19%  Similarity=0.277  Sum_probs=64.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCC---Cc------------hhhhh----HhhhCCCCCCceEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNL---ED------------KSKVD----LLKSLPGAETRLIFFEA   65 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~------------~~~~~----~~~~~~~~~~~~~~~~~   65 (341)
                      ..+|+|+| .|-+|+++++.|+..|. ++++++. +.   ++            ..|.+    .+..+.. .-+++.+..
T Consensus        28 ~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~-D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp-~v~v~~~~~  104 (212)
T PRK08644         28 KAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDF-DVVEPSNLNRQQYFISQIGMPKVEALKENLLEINP-FVEIEAHNE  104 (212)
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeC-CEeccccccccEeehhhCCChHHHHHHHHHHHHCC-CCEEEEEee
Confidence            46899999 68999999999999995 5777766 51   11            11111    1222211 124444555


Q ss_pred             CCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccc
Q 019415           66 EIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVL  132 (341)
Q Consensus        66 Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~  132 (341)
                      .+++ +.+.+.++++|+||.+...                ...-..+.+.|.+. +  ..+|+.+...
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~D~----------------~~~r~~l~~~~~~~~~--~p~I~~~~~~  153 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAFDN----------------AETKAMLVETVLEHPG--KKLVAASGMA  153 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECCCC----------------HHHHHHHHHHHHHhCC--CCEEEeehhh
Confidence            5543 5566788899999998321                11123456677776 6  5677776544

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.58  E-value=0.014  Score=54.50  Aligned_cols=80  Identities=28%  Similarity=0.294  Sum_probs=49.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceEE-----E-ecCCCChHHHHHHhc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLIF-----F-EAEIYDPDTFENAIQ   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~-----~-~~Dl~~~~~~~~~~~   78 (341)
                      |+|.|+| .|++|..++..|++.|++|++++| +...   .+.+...  +-.++++.-     + .+.++-..+..++++
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~-~~~~---v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~   75 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDI-DQEK---VDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIR   75 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcCCeEEEEEC-CHHH---HHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHh
Confidence            5799998 899999999999999999999988 6643   2222220  000001000     0 011111123455677


Q ss_pred             CCCEEEEeccCCc
Q 019415           79 GCDFVFHVATPLQ   91 (341)
Q Consensus        79 ~~d~Vi~~a~~~~   91 (341)
                      ++|+||-+.....
T Consensus        76 ~advvii~vpt~~   88 (411)
T TIGR03026        76 DADVIIICVPTPL   88 (411)
T ss_pred             hCCEEEEEeCCCC
Confidence            8999998877543

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.54  E-value=0.0065  Score=54.83  Aligned_cols=80  Identities=24%  Similarity=0.244  Sum_probs=48.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|.|+| .|-+|..++..|++.|++|++..| +......+.....-....++... ...+....++.++++++|+||-
T Consensus         4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r-~~~~~~~i~~~~~~~~~~~g~~~-~~~~~~~~~~~e~~~~aD~Vi~   80 (328)
T PRK14618          4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWAR-RPEFAAALAAERENREYLPGVAL-PAELYPTADPEEALAGADFAVV   80 (328)
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHhCcccccCCCCcC-CCCeEEeCCHHHHHcCCCEEEE
Confidence            57999998 899999999999999999999999 65432222221100000011100 0001111234556678999988


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        81 ~v~   83 (328)
T PRK14618         81 AVP   83 (328)
T ss_pred             ECc
Confidence            754

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.53  E-value=0.011  Score=54.87  Aligned_cols=72  Identities=17%  Similarity=0.178  Sum_probs=53.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      ++|+|||+| +|..|..++..+.+.|++|++++. ++.... .. +        .-.++..|..|.+.+.++++  ++|.
T Consensus        11 ~~~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~-~~~~~~-~~-~--------ad~~~~~~~~d~~~l~~~~~~~~id~   78 (395)
T PRK09288         11 SATRVMLLG-SGELGKEVAIEAQRLGVEVIAVDR-YANAPA-MQ-V--------AHRSHVIDMLDGDALRAVIEREKPDY   78 (395)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CCCCch-HH-h--------hhheEECCCCCHHHHHHHHHHhCCCE
Confidence            357999998 579999999999999999999877 653300 00 0        11256778888888888887  7998


Q ss_pred             EEEecc
Q 019415           83 VFHVAT   88 (341)
Q Consensus        83 Vi~~a~   88 (341)
                      |+....
T Consensus        79 vi~~~e   84 (395)
T PRK09288         79 IVPEIE   84 (395)
T ss_pred             EEEeeC
Confidence            886543

>PRK06849 hypothetical protein; Provisional

Probab=96.53  E-value=0.019  Score=53.14  Aligned_cols=36  Identities=17%  Similarity=0.055  Sum_probs=32.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      ++|+|||||+...+|-++++.|.+.|++|++++. +.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~-~~   38 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADS-LK   38 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-Cc
Confidence            4599999999999999999999999999999877 54

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.53  E-value=0.019  Score=52.01  Aligned_cols=95  Identities=18%  Similarity=0.163  Sum_probs=55.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHH-CCCe---EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLD-KGYI---VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++|.|+||||++|+.|++.|++ ....   +..++. ..+.    ...   +... +-.....++.+++.    ++++|+
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss-~~sg----~~~---~~f~-g~~~~v~~~~~~~~----~~~~Di   68 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST-SQAG----GAA---PSFG-GKEGTLQDAFDIDA----LKKLDI   68 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc-hhhC----Ccc---cccC-CCcceEEecCChhH----hcCCCE
Confidence            6899999999999999985555 4555   555544 2221    111   1111 11123334444433    357899


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcC-EEEEecccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK-RLIYTASVL  132 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~I~~Ss~~  132 (341)
                      ||.+++...                 +..+...+.+.| .+ .+|=.||+.
T Consensus        69 vf~a~~~~~-----------------s~~~~~~~~~aG-~~~~VID~Ss~f  101 (369)
T PRK06598         69 IITCQGGDY-----------------TNEVYPKLRAAG-WQGYWIDAASTL  101 (369)
T ss_pred             EEECCCHHH-----------------HHHHHHHHHhCC-CCeEEEECChHH
Confidence            998875321                 334555666667 43 467777765

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.52  E-value=0.021  Score=53.93  Aligned_cols=81  Identities=21%  Similarity=0.255  Sum_probs=50.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhC--CCCCCceEEE----ec-CCCChHHHHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSL--PGAETRLIFF----EA-EIYDPDTFENA   76 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~----~~-Dl~~~~~~~~~   76 (341)
                      +|+|.|+| .|++|..++..|++.|  ++|++++. +..   +++.+..-  +-.+++..-+    .+ .+.-..++.+.
T Consensus         1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~-~~~---~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~   75 (473)
T PLN02353          1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDI-SVP---RIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKH   75 (473)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEEC-CHH---HHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHH
Confidence            47899998 9999999999999985  88999988 653   34444331  1001111110    01 11112234556


Q ss_pred             hcCCCEEEEeccCCc
Q 019415           77 IQGCDFVFHVATPLQ   91 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~   91 (341)
                      ++++|++|=|.+...
T Consensus        76 i~~advi~I~V~TP~   90 (473)
T PLN02353         76 VAEADIVFVSVNTPT   90 (473)
T ss_pred             HhcCCEEEEEeCCCC
Confidence            778999999987544

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.50  E-value=0.0066  Score=53.65  Aligned_cols=75  Identities=20%  Similarity=0.264  Sum_probs=52.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEe-----cCCCChHHHHHHhcCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFE-----AEIYDPDTFENAIQGC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~~~~~~~~~~~~~   80 (341)
                      +|+|.|+| +|--|++|+..|++.||+|+.-.| ++.-...+..-      +.+.+|.+     .++.-..++.++++++
T Consensus         1 ~~kI~ViG-aGswGTALA~~la~ng~~V~lw~r-~~~~~~~i~~~------~~N~~yLp~i~lp~~l~at~Dl~~a~~~a   72 (329)
T COG0240           1 MMKIAVIG-AGSWGTALAKVLARNGHEVRLWGR-DEEIVAEINET------RENPKYLPGILLPPNLKATTDLAEALDGA   72 (329)
T ss_pred             CceEEEEc-CChHHHHHHHHHHhcCCeeEEEec-CHHHHHHHHhc------CcCccccCCccCCcccccccCHHHHHhcC
Confidence            37899999 889999999999999999999999 76432222221      12233333     3333345788899999


Q ss_pred             CEEEEecc
Q 019415           81 DFVFHVAT   88 (341)
Q Consensus        81 d~Vi~~a~   88 (341)
                      |+|+-...
T Consensus        73 d~iv~avP   80 (329)
T COG0240          73 DIIVIAVP   80 (329)
T ss_pred             CEEEEECC
Confidence            99987643

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.49  E-value=0.094  Score=40.98  Aligned_cols=103  Identities=17%  Similarity=0.273  Sum_probs=63.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhhhH----hhhCCCCCCceEEEecC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKVDL----LKSLPGAETRLIFFEAE   66 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~~----~~~~~~~~~~~~~~~~D   66 (341)
                      +|+|+| .|-+|+++++.|+..|. ++++++. +.-.                ..|.+.    +..+.+ .-.++.+..+
T Consensus         1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~-d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p-~v~i~~~~~~   77 (143)
T cd01483           1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDF-DTVELSNLNRQFLARQADIGKPKAEVAARRLNELNP-GVNVTAVPEG   77 (143)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcC-CCcCcchhhccccCChhHCCChHHHHHHHHHHHHCC-CcEEEEEeee
Confidence            589999 59999999999999996 6777654 3111                112222    222211 1234445555


Q ss_pred             CCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           67 IYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        67 l~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +.+. ...+.++++|+||.+....                .....+.++|++.+  ..+|..++..
T Consensus        78 ~~~~-~~~~~~~~~diVi~~~d~~----------------~~~~~l~~~~~~~~--i~~i~~~~~g  124 (143)
T cd01483          78 ISED-NLDDFLDGVDLVIDAIDNI----------------AVRRALNRACKELG--IPVIDAGGLG  124 (143)
T ss_pred             cChh-hHHHHhcCCCEEEECCCCH----------------HHHHHHHHHHHHcC--CCEEEEcCCC
Confidence            4433 3467778999999986541                12345667888887  5577777754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.49  E-value=0.011  Score=52.05  Aligned_cols=57  Identities=16%  Similarity=0.124  Sum_probs=47.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+|.+|.+|+.++..|+++|+.|++..| +..                             ++.+..+.+|+||
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~-~t~-----------------------------~l~e~~~~ADIVI  207 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHS-RST-----------------------------DAKALCRQADIVV  207 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECC-CCC-----------------------------CHHHHHhcCCEEE
Confidence            5789999999999999999999999999999866 211                             3566777889999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      -+.+...
T Consensus       208 savg~~~  214 (301)
T PRK14194        208 AAVGRPR  214 (301)
T ss_pred             EecCChh
Confidence            9887654

>PRK08223 hypothetical protein; Validated

Probab=96.46  E-value=0.076  Score=46.44  Aligned_cols=107  Identities=17%  Similarity=0.236  Sum_probs=64.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhh----hHhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKV----DLLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~----~~~~~~~~~~~~~~~~~   64 (341)
                      ..+|+|+| .|-+|++++..|+..|. ++++++. +.-.                ..|.    +.+..+.. .-+++.+.
T Consensus        27 ~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~-D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP-~v~V~~~~  103 (287)
T PRK08223         27 NSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADF-DVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINP-ELEIRAFP  103 (287)
T ss_pred             cCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeC-CCcchhccccccCcChhHCCCcHHHHHHHHHHHHCC-CCEEEEEe
Confidence            46899999 77899999999999984 5666554 3211                1111    22222211 12455555


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ..++ ++...++++++|+||.+.-...              ...-..+-++|.+.+  ..+|+.|...
T Consensus       104 ~~l~-~~n~~~ll~~~DlVvD~~D~~~--------------~~~r~~ln~~c~~~~--iP~V~~~~~g  154 (287)
T PRK08223        104 EGIG-KENADAFLDGVDVYVDGLDFFE--------------FDARRLVFAACQQRG--IPALTAAPLG  154 (287)
T ss_pred             cccC-ccCHHHHHhCCCEEEECCCCCc--------------HHHHHHHHHHHHHcC--CCEEEEeccC
Confidence            5554 4557778889999986632211              111234667788887  5677765544

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.46  E-value=0.011  Score=57.52  Aligned_cols=70  Identities=20%  Similarity=0.228  Sum_probs=56.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi~   85 (341)
                      .+|+|+| .|-+|+++++.|.++|++|+++++ +++   +.+.+++     .+...+.+|.++++.++++ ++++|.|+-
T Consensus       418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~-d~~---~~~~~~~-----~g~~~i~GD~~~~~~L~~a~i~~a~~viv  487 (558)
T PRK10669        418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIET-SRT---RVDELRE-----RGIRAVLGNAANEEIMQLAHLDCARWLLL  487 (558)
T ss_pred             CCEEEEC-CChHHHHHHHHHHHCCCCEEEEEC-CHH---HHHHHHH-----CCCeEEEcCCCCHHHHHhcCccccCEEEE
Confidence            5789999 899999999999999999999888 653   3444443     2788999999999988765 467887765


Q ss_pred             e
Q 019415           86 V   86 (341)
Q Consensus        86 ~   86 (341)
                      +
T Consensus       488 ~  488 (558)
T PRK10669        488 T  488 (558)
T ss_pred             E
Confidence            5

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.45  E-value=0.041  Score=47.16  Aligned_cols=105  Identities=17%  Similarity=0.199  Sum_probs=63.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhh----hHhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKV----DLLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~----~~~~~~~~~~~~~~~~~   64 (341)
                      ..+|+|+| .|-+|+++++.|+..|. +++++++ +.-.                ..|.    +.+..+.. .-.++.+.
T Consensus        24 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~-D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp-~v~i~~~~  100 (240)
T TIGR02355        24 ASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDF-DTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINP-HIAINPIN  100 (240)
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeC-CcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCC-CcEEEEEe
Confidence            46899999 78899999999999984 5666654 3211                0111    12222211 11344444


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ..+ +.+.+.++++++|+||.+....                ..-..+-++|.+.+  ..+|+.++.+
T Consensus       101 ~~i-~~~~~~~~~~~~DlVvd~~D~~----------------~~r~~ln~~~~~~~--ip~v~~~~~g  149 (240)
T TIGR02355       101 AKL-DDAELAALIAEHDIVVDCTDNV----------------EVRNQLNRQCFAAK--VPLVSGAAIR  149 (240)
T ss_pred             ccC-CHHHHHHHhhcCCEEEEcCCCH----------------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            334 3456777888999999985321                11234567788887  5577765543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.41  E-value=0.014  Score=51.10  Aligned_cols=73  Identities=15%  Similarity=0.200  Sum_probs=47.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++++++|+|+ |-+|+.++..|++.|++|+++.| +..+   .+.+.. +... ..+...  ++.+     ..+.++|+|
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R-~~~~---~~~la~~~~~~-~~~~~~--~~~~-----~~~~~~Div  182 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANR-TVSK---AEELAERFQRY-GEIQAF--SMDE-----LPLHRVDLI  182 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHHHhhc-CceEEe--chhh-----hcccCccEE
Confidence            3578999997 89999999999999999999999 6543   222221 1111 112222  1111     123578999


Q ss_pred             EEeccCC
Q 019415           84 FHVATPL   90 (341)
Q Consensus        84 i~~a~~~   90 (341)
                      |++.+..
T Consensus       183 Inatp~g  189 (270)
T TIGR00507       183 INATSAG  189 (270)
T ss_pred             EECCCCC
Confidence            9998764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.40  E-value=0.047  Score=50.22  Aligned_cols=105  Identities=26%  Similarity=0.320  Sum_probs=65.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhhh----HhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKVD----LLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~----~~~~~~~~~~~~~~~~   64 (341)
                      ..+|+|+| .|-+|++++..|+..|. +++++++ +.-.                ..|.+    .+..+.+ .-.+..+.
T Consensus       135 ~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~-d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~v~v~~~~  211 (376)
T PRK08762        135 EARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDH-DVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNP-DVQVEAVQ  211 (376)
T ss_pred             cCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeC-CEecchhhccccccchhhCCCcHHHHHHHHHHHHCC-CCEEEEEe
Confidence            46899998 57799999999999995 6877776 5110                12222    2222211 11334444


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ..++ .+.+.++++++|+||++.....                .-..+-++|.+.+  ..+|+.+..+
T Consensus       212 ~~~~-~~~~~~~~~~~D~Vv~~~d~~~----------------~r~~ln~~~~~~~--ip~i~~~~~g  260 (376)
T PRK08762        212 ERVT-SDNVEALLQDVDVVVDGADNFP----------------TRYLLNDACVKLG--KPLVYGAVFR  260 (376)
T ss_pred             ccCC-hHHHHHHHhCCCEEEECCCCHH----------------HHHHHHHHHHHcC--CCEEEEEecc
Confidence            4443 3567778889999999954321                1123557788887  5678776554

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.37  E-value=0.099  Score=43.46  Aligned_cols=78  Identities=15%  Similarity=0.204  Sum_probs=51.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCC---CCchh------------hh----hHhhhCCCCCCceEEEe
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPN---LEDKS------------KV----DLLKSLPGAETRLIFFE   64 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~---~~~~~------------~~----~~~~~~~~~~~~~~~~~   64 (341)
                      +..+|+|.| .|-+|+.++..|+..|. +++++++ +   .++..            +.    +.+..+.. .-.+..+.
T Consensus        20 ~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~-D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp-~~~i~~~~   96 (200)
T TIGR02354        20 EQATVAICG-LGGLGSNVAINLARAGIGKLILVDF-DVVEPSNLNRQQYKASQVGEPKTEALKENISEINP-YTEIEAYD   96 (200)
T ss_pred             hCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECC-CEEcccccccccCChhhCCCHHHHHHHHHHHHHCC-CCEEEEee
Confidence            356899999 57799999999999997 6888777 5   22211            11    11112211 12455555


Q ss_pred             cCCCChHHHHHHhcCCCEEEEe
Q 019415           65 AEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      .+++ .+.+.++++++|+||.+
T Consensus        97 ~~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        97 EKIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eeCC-HhHHHHHhcCCCEEEEC
Confidence            5664 46677888999999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.34  E-value=0.065  Score=43.49  Aligned_cols=103  Identities=17%  Similarity=0.266  Sum_probs=62.2

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCC---Cc------------hhhh----hHhhhCCCCCCceEEEecCC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNL---ED------------KSKV----DLLKSLPGAETRLIFFEAEI   67 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~---~~------------~~~~----~~~~~~~~~~~~~~~~~~Dl   67 (341)
                      +|+|+| .|-+|+++++.|+..|. ++++++. +.   ++            ..|.    ..+..+.. .-+++.+...+
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~-D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp-~v~i~~~~~~~   77 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDF-DVVEPSNLNRQQYFLSQIGEPKVEALKENLREINP-FVKIEAINIKI   77 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeC-CEEcCcchhcccccHhhCCChHHHHHHHHHHHHCC-CCEEEEEEeec
Confidence            589999 68999999999999996 5888776 54   11            0111    11222211 12444555555


Q ss_pred             CChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccc
Q 019415           68 YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVL  132 (341)
Q Consensus        68 ~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~  132 (341)
                      +. +.+.+.++++|+||.+.....                .-..+.+.+.+. +  ..||+.+...
T Consensus        78 ~~-~~~~~~l~~~DlVi~~~d~~~----------------~r~~i~~~~~~~~~--ip~i~~~~~~  124 (174)
T cd01487          78 DE-NNLEGLFGDCDIVVEAFDNAE----------------TKAMLAESLLGNKN--KPVVCASGMA  124 (174)
T ss_pred             Ch-hhHHHHhcCCCEEEECCCCHH----------------HHHHHHHHHHHHCC--CCEEEEehhh
Confidence            33 567778899999999832111                112355666666 5  5566665443

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.33  E-value=0.024  Score=45.05  Aligned_cols=58  Identities=24%  Similarity=0.261  Sum_probs=42.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+|+|+|+|.+..+|+.|+..|.++|..|+..-. +-                             ..+++..+..|+||
T Consensus        35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~-~T-----------------------------~~l~~~~~~ADIVV   84 (160)
T PF02882_consen   35 EGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHS-KT-----------------------------KNLQEITRRADIVV   84 (160)
T ss_dssp             TT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-T-TS-----------------------------SSHHHHHTTSSEEE
T ss_pred             CCCEEEEECCcCCCChHHHHHHHhCCCeEEeccC-CC-----------------------------CcccceeeeccEEe
Confidence            5689999999999999999999999999998644 21                             23566777889999


Q ss_pred             EeccCCcc
Q 019415           85 HVATPLQH   92 (341)
Q Consensus        85 ~~a~~~~~   92 (341)
                      -.+|....
T Consensus        85 sa~G~~~~   92 (160)
T PF02882_consen   85 SAVGKPNL   92 (160)
T ss_dssp             E-SSSTT-
T ss_pred             eeeccccc
Confidence            88887554

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.30  E-value=0.014  Score=53.85  Aligned_cols=78  Identities=15%  Similarity=0.118  Sum_probs=46.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceEE----EecCCCChHHHHHHhcCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLIF----FEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~----~~~Dl~~~~~~~~~~~~~   80 (341)
                      |+|.|+| .|++|..++..|+ .||+|+++++ +..+   .+.+...  +-..+++.-    ..+.++...+...+.+++
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~-d~~k---v~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~a   74 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDI-LPSR---VAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDA   74 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEEC-CHHH---HHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCC
Confidence            5799997 9999999997766 5999999999 6644   3333321  001111100    011111112234456788


Q ss_pred             CEEEEeccCC
Q 019415           81 DFVFHVATPL   90 (341)
Q Consensus        81 d~Vi~~a~~~   90 (341)
                      |+||=+....
T Consensus        75 d~vii~Vpt~   84 (388)
T PRK15057         75 DYVIIATPTD   84 (388)
T ss_pred             CEEEEeCCCC
Confidence            9999887643

>PRK08328 hypothetical protein; Provisional

Probab=96.29  E-value=0.082  Score=45.06  Aligned_cols=105  Identities=17%  Similarity=0.216  Sum_probs=64.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCch-----------------hhh----hHhhhCCCCCCceEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDK-----------------SKV----DLLKSLPGAETRLIFF   63 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-----------------~~~----~~~~~~~~~~~~~~~~   63 (341)
                      ..+|+|+| .|-+|+++++.|+..|. ++++++. +.-..                 .+.    ..+..+.. .-.++.+
T Consensus        27 ~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~-D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np-~v~v~~~  103 (231)
T PRK08328         27 KAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDE-QTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNS-DIKIETF  103 (231)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC-CccChhhhccccccChhhcCchHHHHHHHHHHHHhCC-CCEEEEE
Confidence            46899999 78899999999999994 6777654 32110                 111    11222211 1234444


Q ss_pred             ecCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           64 EAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        64 ~~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ...+ +++.+.+.++++|+||.+.....                .-..+-++|++.+  ..+|+.++.+
T Consensus       104 ~~~~-~~~~~~~~l~~~D~Vid~~d~~~----------------~r~~l~~~~~~~~--ip~i~g~~~g  153 (231)
T PRK08328        104 VGRL-SEENIDEVLKGVDVIVDCLDNFE----------------TRYLLDDYAHKKG--IPLVHGAVEG  153 (231)
T ss_pred             eccC-CHHHHHHHHhcCCEEEECCCCHH----------------HHHHHHHHHHHcC--CCEEEEeecc
Confidence            5555 44557778889999999854321                1123446778877  5577777665

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.28  E-value=0.02  Score=51.17  Aligned_cols=68  Identities=19%  Similarity=0.225  Sum_probs=52.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +++|.|+| +|++|+-++..-...|++|++++- +...          |...-.-..+..+.+|++.+.++.++||+|-.
T Consensus         1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp-~~~~----------PA~~va~~~i~~~~dD~~al~ela~~~DViT~   68 (375)
T COG0026           1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDP-DADA----------PAAQVADRVIVAAYDDPEALRELAAKCDVITY   68 (375)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecC-CCCC----------chhhcccceeecCCCCHHHHHHHHhhCCEEEE
Confidence            36899999 899999999999999999999864 4432          11111234567777899999999999998854

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.28  E-value=0.02  Score=47.66  Aligned_cols=35  Identities=31%  Similarity=0.276  Sum_probs=31.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      ++|+|+|+|. |.+|+++++.|.+.|++|++.++ +.
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~-~~   61 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADI-NE   61 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcC-CH
Confidence            4689999995 79999999999999999998877 54

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.25  E-value=0.057  Score=46.89  Aligned_cols=108  Identities=17%  Similarity=0.318  Sum_probs=63.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCc----------------hhhhhHhh-hCCCCCCceEEEec-
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLED----------------KSKVDLLK-SLPGAETRLIFFEA-   65 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~----------------~~~~~~~~-~~~~~~~~~~~~~~-   65 (341)
                      +..+|+|+| .|-+|+++++.|+..| .++++++. +.-.                ..+.+.+. .+....+.+++... 
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~-D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~  106 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDM-DDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD  106 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeC-CEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe
Confidence            346899999 8889999999999999 57777764 3111                01111111 11111233333222 


Q ss_pred             CCCChHHHHHHhc-CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           66 EIYDPDTFENAIQ-GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        66 Dl~~~~~~~~~~~-~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +..+++...+++. ++|+||.+.....                .-..+.+.|++.+  ..||..++++
T Consensus       107 ~~i~~e~~~~ll~~~~D~VIdaiD~~~----------------~k~~L~~~c~~~~--ip~I~~gGag  156 (268)
T PRK15116        107 DFITPDNVAEYMSAGFSYVIDAIDSVR----------------PKAALIAYCRRNK--IPLVTTGGAG  156 (268)
T ss_pred             cccChhhHHHHhcCCCCEEEEcCCCHH----------------HHHHHHHHHHHcC--CCEEEECCcc
Confidence            2334566666664 6999999855322                1235778888887  4566555543

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.23  E-value=0.042  Score=53.84  Aligned_cols=72  Identities=13%  Similarity=0.210  Sum_probs=58.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi   84 (341)
                      .++|+|+| .|-+|+.+++.|.+.|+++++++. +++   ..+.++.     .+...+.||.++++.++++ ++++|.||
T Consensus       400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~-d~~---~v~~~~~-----~g~~v~~GDat~~~~L~~agi~~A~~vv  469 (601)
T PRK03659        400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLER-DIS---AVNLMRK-----YGYKVYYGDATQLELLRAAGAEKAEAIV  469 (601)
T ss_pred             cCCEEEec-CchHHHHHHHHHHhCCCCEEEEEC-CHH---HHHHHHh-----CCCeEEEeeCCCHHHHHhcCCccCCEEE
Confidence            36899999 999999999999999999999988 654   3444433     2678999999999988876 56788887


Q ss_pred             Eec
Q 019415           85 HVA   87 (341)
Q Consensus        85 ~~a   87 (341)
                      -+-
T Consensus       470 ~~~  472 (601)
T PRK03659        470 ITC  472 (601)
T ss_pred             EEe
Confidence            763

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.21  E-value=0.019  Score=51.10  Aligned_cols=69  Identities=13%  Similarity=0.198  Sum_probs=48.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+|.|+| .|.+|..+++.|.+.|++|.+.+| +.+.   .+.+...     +...    ..+.+++.+.+..+|+||-+
T Consensus         1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr-~~~~---~~~l~~~-----g~~~----~~s~~~~~~~~~~~dvIi~~   66 (298)
T TIGR00872         1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDH-DQDA---VKAMKED-----RTTG----VANLRELSQRLSAPRVVWVM   66 (298)
T ss_pred             CEEEEEc-chHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHc-----CCcc----cCCHHHHHhhcCCCCEEEEE
Confidence            5799999 899999999999999999999988 6643   3333221     1111    12445555566678988888


Q ss_pred             ccC
Q 019415           87 ATP   89 (341)
Q Consensus        87 a~~   89 (341)
                      ...
T Consensus        67 vp~   69 (298)
T TIGR00872        67 VPH   69 (298)
T ss_pred             cCc
Confidence            543

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.21  E-value=0.019  Score=41.38  Aligned_cols=69  Identities=30%  Similarity=0.278  Sum_probs=44.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHCC---CeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKG---YIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ||.|+| +|.+|++|++.|++.|   ++|... .| +++   +...+....    .+.+...      +..++++.+|+|
T Consensus         1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r-~~~---~~~~~~~~~----~~~~~~~------~~~~~~~~advv   65 (96)
T PF03807_consen    1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSR-SPE---KAAELAKEY----GVQATAD------DNEEAAQEADVV   65 (96)
T ss_dssp             EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEES-SHH---HHHHHHHHC----TTEEESE------EHHHHHHHTSEE
T ss_pred             CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccC-cHH---HHHHHHHhh----ccccccC------ChHHhhccCCEE
Confidence            578885 9999999999999999   999965 77 553   333332211    1112221      245566688999


Q ss_pred             EEeccCCc
Q 019415           84 FHVATPLQ   91 (341)
Q Consensus        84 i~~a~~~~   91 (341)
                      |-+.-+..
T Consensus        66 ilav~p~~   73 (96)
T PF03807_consen   66 ILAVKPQQ   73 (96)
T ss_dssp             EE-S-GGG
T ss_pred             EEEECHHH
Confidence            99865433

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.21  E-value=0.01  Score=52.16  Aligned_cols=34  Identities=26%  Similarity=0.301  Sum_probs=30.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      |+|.|+| .|.+|..++..|.+.|++|++.+| +..
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~-~~~   34 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSR-RES   34 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEEC-CHH
Confidence            5799998 899999999999999999999988 654

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=96.19  E-value=0.0093  Score=54.10  Aligned_cols=34  Identities=29%  Similarity=0.413  Sum_probs=31.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      +|+|.|+| .|.+|..++..|.+.|++|++++| +.
T Consensus         2 ~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r-~~   35 (341)
T PRK08229          2 MARICVLG-AGSIGCYLGGRLAAAGADVTLIGR-AR   35 (341)
T ss_pred             CceEEEEC-CCHHHHHHHHHHHhcCCcEEEEec-HH
Confidence            47899998 999999999999999999999998 53

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.18  E-value=0.015  Score=51.95  Aligned_cols=74  Identities=22%  Similarity=0.256  Sum_probs=49.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |+.-+.++|.|+| .|.+|..++..|.+.|+  +|++++| +....   +.....     ++...   .  ..+..+.++
T Consensus         1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr-~~~~~---~~a~~~-----g~~~~---~--~~~~~~~~~   65 (307)
T PRK07502          1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADR-SAETR---ARAREL-----GLGDR---V--TTSAAEAVK   65 (307)
T ss_pred             CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEEC-CHHHH---HHHHhC-----CCCce---e--cCCHHHHhc
Confidence            6655568999998 99999999999999984  8999888 65432   222221     11000   0  112345667


Q ss_pred             CCCEEEEeccC
Q 019415           79 GCDFVFHVATP   89 (341)
Q Consensus        79 ~~d~Vi~~a~~   89 (341)
                      ++|+||.+...
T Consensus        66 ~aDvViiavp~   76 (307)
T PRK07502         66 GADLVILCVPV   76 (307)
T ss_pred             CCCEEEECCCH
Confidence            89999998754

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.16  E-value=0.091  Score=46.72  Aligned_cols=104  Identities=27%  Similarity=0.421  Sum_probs=64.0

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhh----hHhhhCCCCCCceEEEecC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKV----DLLKSLPGAETRLIFFEAE   66 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~----~~~~~~~~~~~~~~~~~~D   66 (341)
                      ||||+| .|-+|.++++.|+..|. ++++++. +.-.                ..+.    +.+..+.. .-.++.+..+
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~-D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp-~v~V~~~~~~   77 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDL-DTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNP-NVKIVAYHAN   77 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcC-CCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCC-CCeEEEEecc
Confidence            589999 58999999999999994 6776654 3211                0111    11222211 1245666677


Q ss_pred             CCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           67 IYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        67 l~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +.+.....+.+++.|+||.+...                ...-..+-+.|+..+  ..||..++.+
T Consensus        78 i~~~~~~~~f~~~~DvVv~a~Dn----------------~~ar~~in~~c~~~~--ip~I~~gt~G  125 (312)
T cd01489          78 IKDPDFNVEFFKQFDLVFNALDN----------------LAARRHVNKMCLAAD--VPLIESGTTG  125 (312)
T ss_pred             CCCccchHHHHhcCCEEEECCCC----------------HHHHHHHHHHHHHCC--CCEEEEecCc
Confidence            76644445677889999988432                222334556677776  5577777665

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.13  E-value=0.023  Score=52.36  Aligned_cols=70  Identities=16%  Similarity=0.197  Sum_probs=52.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi~   85 (341)
                      ||+|+| +|..|..+++.+.+.|++|++++. +... .... +        .-+++..|..|++.+.++++  ++|.|+.
T Consensus         1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~-~~~~-~~~~-~--------ad~~~~~~~~d~~~l~~~~~~~~id~v~~   68 (380)
T TIGR01142         1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDR-YANA-PAMQ-V--------AHRSYVINMLDGDALRAVIEREKPDYIVP   68 (380)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeC-CCCC-chhh-h--------CceEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence            689999 699999999999999999999887 6533 1110 0        11345678889888888887  7999986


Q ss_pred             eccC
Q 019415           86 VATP   89 (341)
Q Consensus        86 ~a~~   89 (341)
                      ....
T Consensus        69 ~~e~   72 (380)
T TIGR01142        69 EIEA   72 (380)
T ss_pred             ccCc
Confidence            5443

This enzyme is an alternative to PurN (TIGR00639)

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.13  E-value=0.052  Score=47.49  Aligned_cols=75  Identities=15%  Similarity=0.163  Sum_probs=46.7

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |++.+++||.|+| .|.||+.+++.|.+.  +++|.++.+++..+   .+.+....+   ....    .   .++++++.
T Consensus         1 ~~~m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~---a~~~a~~~g---~~~~----~---~~~eell~   66 (271)
T PRK13302          1 MSSRPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQR---HADFIWGLR---RPPP----V---VPLDQLAT   66 (271)
T ss_pred             CCCCCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHH---HHHHHHhcC---CCcc----c---CCHHHHhc
Confidence            6665668999999 899999999999874  68887654414322   222221100   0000    1   23445567


Q ss_pred             CCCEEEEeccC
Q 019415           79 GCDFVFHVATP   89 (341)
Q Consensus        79 ~~d~Vi~~a~~   89 (341)
                      ++|+|+-++..
T Consensus        67 ~~D~Vvi~tp~   77 (271)
T PRK13302         67 HADIVVEAAPA   77 (271)
T ss_pred             CCCEEEECCCc
Confidence            89999998764

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.09  E-value=0.023  Score=49.96  Aligned_cols=56  Identities=18%  Similarity=0.226  Sum_probs=45.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEe-cCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTL-RPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .+++|+|+|.+|.+|..++..|+++|+.|++.. | ..                              ++.++.+.+|+|
T Consensus       157 ~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~r-T~------------------------------~l~e~~~~ADIV  205 (296)
T PRK14188        157 SGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSR-TR------------------------------DLPAVCRRADIL  205 (296)
T ss_pred             CCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCC-CC------------------------------CHHHHHhcCCEE
Confidence            578999999999999999999999999999983 5 21                              145666788999


Q ss_pred             EEeccCCc
Q 019415           84 FHVATPLQ   91 (341)
Q Consensus        84 i~~a~~~~   91 (341)
                      |-+.+...
T Consensus       206 Isavg~~~  213 (296)
T PRK14188        206 VAAVGRPE  213 (296)
T ss_pred             EEecCChh
Confidence            88877543

>PRK07877 hypothetical protein; Provisional

Probab=96.08  E-value=0.063  Score=53.23  Aligned_cols=104  Identities=14%  Similarity=0.166  Sum_probs=66.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCc---------------hhhhhH----hhhCCCCCCceEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLED---------------KSKVDL----LKSLPGAETRLIFF   63 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---------------~~~~~~----~~~~~~~~~~~~~~   63 (341)
                      +..+|+|+|+ | +|++++..|+..|-  ++++++. +.-.               ..|.+.    +..+.. .-.++.+
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~-D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp-~i~v~~~  181 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADF-DTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDP-YLPVEVF  181 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcC-CEEcccccccccCChhhcccHHHHHHHHHHHHHCC-CCEEEEE
Confidence            3468999998 8 99999999999983  6776654 3211               111111    111111 1256666


Q ss_pred             ecCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           64 EAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        64 ~~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ...++ ++.+.++++++|+||.|.-..                ..=..+-++|.+.+  ..+|+-++.
T Consensus       182 ~~~i~-~~n~~~~l~~~DlVvD~~D~~----------------~~R~~ln~~a~~~~--iP~i~~~~~  230 (722)
T PRK07877        182 TDGLT-EDNVDAFLDGLDVVVEECDSL----------------DVKVLLREAARARR--IPVLMATSD  230 (722)
T ss_pred             eccCC-HHHHHHHhcCCCEEEECCCCH----------------HHHHHHHHHHHHcC--CCEEEEcCC
Confidence            66665 678899999999999994321                11123557788887  557776654

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.08  E-value=0.064  Score=50.97  Aligned_cols=103  Identities=17%  Similarity=0.147  Sum_probs=64.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC--------------h-
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD--------------P-   70 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--------------~-   70 (341)
                      +.+|+|+| .|-+|...+..+...|.+|+++++ +..+.+   ..+.+     +.+++..|..+              . 
T Consensus       165 g~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~-~~~rle---~aesl-----GA~~v~i~~~e~~~~~~gya~~~s~~~  234 (509)
T PRK09424        165 PAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDT-RPEVAE---QVESM-----GAEFLELDFEEEGGSGDGYAKVMSEEF  234 (509)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeC-CHHHHH---HHHHc-----CCeEEEeccccccccccchhhhcchhH
Confidence            56999999 899999999999999999999988 665433   33332     33333222211              1 


Q ss_pred             -H----HHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           71 -D----TFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        71 -~----~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                       +    .+.+..+++|+||.+++.......    ..      -+...++.++..   ..++.++..
T Consensus       235 ~~~~~~~~~~~~~gaDVVIetag~pg~~aP----~l------it~~~v~~mkpG---gvIVdvg~~  287 (509)
T PRK09424        235 IKAEMALFAEQAKEVDIIITTALIPGKPAP----KL------ITAEMVASMKPG---SVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHhccCCCCEEEECCCCCcccCc----ch------HHHHHHHhcCCC---CEEEEEccC
Confidence             1    112223579999999997553221    11      124455656543   477877763

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.07  E-value=0.022  Score=51.86  Aligned_cols=59  Identities=19%  Similarity=0.151  Sum_probs=43.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .++|+|+|.+|.||..+++.|.+. |++|++++| ....                          ..+..+.++++|+||
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~-~d~~--------------------------~~~~~~~v~~aDlVi   56 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDP-ADPG--------------------------SLDPATLLQRADVLI   56 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcC-Cccc--------------------------cCCHHHHhcCCCEEE
Confidence            379999999999999999999975 889998877 3110                          112345567888888


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      -|..+..
T Consensus        57 lavPv~~   63 (370)
T PRK08818         57 FSAPIRH   63 (370)
T ss_pred             EeCCHHH
Confidence            8866443

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.07  E-value=0.024  Score=52.58  Aligned_cols=75  Identities=16%  Similarity=0.182  Sum_probs=53.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++++|||+| +|-+|+.++..|.+.| .+++++.| +..+   ...+....   +...     ....+++...+..+|+|
T Consensus       180 ~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nR-t~~r---a~~La~~~---~~~~-----~~~~~~l~~~l~~aDiV  246 (414)
T PRK13940        180 SSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANR-TIEK---AQKITSAF---RNAS-----AHYLSELPQLIKKADII  246 (414)
T ss_pred             cCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECC-CHHH---HHHHHHHh---cCCe-----EecHHHHHHHhccCCEE
Confidence            468999999 5999999999999999 47999988 6533   33333211   0111     22335677888899999


Q ss_pred             EEeccCCcc
Q 019415           84 FHVATPLQH   92 (341)
Q Consensus        84 i~~a~~~~~   92 (341)
                      |++.+....
T Consensus       247 I~aT~a~~~  255 (414)
T PRK13940        247 IAAVNVLEY  255 (414)
T ss_pred             EECcCCCCe
Confidence            999876554

>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein

Probab=96.06  E-value=0.046  Score=52.31  Aligned_cols=103  Identities=18%  Similarity=0.290  Sum_probs=70.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEE--ecCCCCchhhhhHhhhC-CCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTT--LRPNLEDKSKVDLLKSL-PGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~--~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ..||+|+| .|-+|++++..|+..| .+++++  ++ -.++..++..+... ....+++.+...|....+++...+++.|
T Consensus       129 ~akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~-v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev~~~~D  206 (637)
T TIGR03693       129 NAKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDA-EEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEAFEPAD  206 (637)
T ss_pred             cccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccc-cchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHhhcCCc
Confidence            35899999 8889999999999999 456565  33 33333323333222 1234577777777778899999999999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEE
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRL  125 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~  125 (341)
                      +||+.+-.....              ....+-++|.+.+ ...+
T Consensus       207 iVi~vsDdy~~~--------------~Lr~lN~acvkeg-k~~I  235 (637)
T TIGR03693       207 WVLYVSDNGDID--------------DLHALHAFCKEEG-KGFI  235 (637)
T ss_pred             EEEEECCCCChH--------------HHHHHHHHHHHcC-CCeE
Confidence            999997644321              1345667777777 4444

Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.06  E-value=0.024  Score=50.70  Aligned_cols=74  Identities=22%  Similarity=0.171  Sum_probs=50.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .+++|+|+|+ |-+|..+++.|...| .+|+++.| +..+   ...+...-    +...+     +.+++.+.+.++|+|
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r-~~~r---a~~la~~~----g~~~~-----~~~~~~~~l~~aDvV  242 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANR-TYER---AEELAKEL----GGNAV-----PLDELLELLNEADVV  242 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeC-CHHH---HHHHHHHc----CCeEE-----eHHHHHHHHhcCCEE
Confidence            4689999995 999999999999876 68999988 6533   22222211    11122     234577778889999


Q ss_pred             EEeccCCcc
Q 019415           84 FHVATPLQH   92 (341)
Q Consensus        84 i~~a~~~~~   92 (341)
                      |.+.+....
T Consensus       243 i~at~~~~~  251 (311)
T cd05213         243 ISATGAPHY  251 (311)
T ss_pred             EECCCCCch
Confidence            999775443

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.03  E-value=0.033  Score=44.32  Aligned_cols=33  Identities=24%  Similarity=0.224  Sum_probs=29.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ++++|+|+| .|-+|...++.|++.|++|++++.
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcC
Confidence            468999999 899999999999999999999854

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.03  E-value=0.054  Score=45.10  Aligned_cols=69  Identities=20%  Similarity=0.193  Sum_probs=46.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|||+| +|-+|...++.|++.|++|+++++ ....  .+..+...    ..+.+..-++.     ...+.++|+||
T Consensus         9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~-~~~~--~l~~l~~~----~~i~~~~~~~~-----~~~l~~adlVi   75 (202)
T PRK06718          9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISP-ELTE--NLVKLVEE----GKIRWKQKEFE-----PSDIVDAFLVI   75 (202)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcC-CCCH--HHHHHHhC----CCEEEEecCCC-----hhhcCCceEEE
Confidence            568999999 599999999999999999999877 5432  22222111    24555543333     22356778887


Q ss_pred             Ee
Q 019415           85 HV   86 (341)
Q Consensus        85 ~~   86 (341)
                      -+
T Consensus        76 aa   77 (202)
T PRK06718         76 AA   77 (202)
T ss_pred             Ec
Confidence            66

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.02  E-value=0.1  Score=47.52  Aligned_cols=105  Identities=13%  Similarity=0.158  Sum_probs=64.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhh----hHhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKV----DLLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~----~~~~~~~~~~~~~~~~~   64 (341)
                      ..+|||+| .|-+|+++++.|+..|. ++++++. +.-.                ..|.    +.+..+.+ .-.++.+.
T Consensus        28 ~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~-D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np-~v~v~~~~  104 (355)
T PRK05597         28 DAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDD-DTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNP-DVKVTVSV  104 (355)
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeC-CEEcccccccCcccChhHCCChHHHHHHHHHHHHCC-CcEEEEEE
Confidence            46899999 58899999999999994 6666655 4211                0111    12222211 12344444


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ..++ ++...+.++++|+||.+.....                .-..+-++|.+.+  ..||+.++.+
T Consensus       105 ~~i~-~~~~~~~~~~~DvVvd~~d~~~----------------~r~~~n~~c~~~~--ip~v~~~~~g  153 (355)
T PRK05597        105 RRLT-WSNALDELRDADVILDGSDNFD----------------TRHLASWAAARLG--IPHVWASILG  153 (355)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCCHH----------------HHHHHHHHHHHcC--CCEEEEEEec
Confidence            5554 4556678889999999954211                1122556788877  5577776554

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.02  E-value=0.0067  Score=53.88  Aligned_cols=66  Identities=26%  Similarity=0.331  Sum_probs=46.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|.|+| .|.+|..+++.|.+.|++|++.+| +..+   .+.+...     ++..       ..++.++++++|+||-
T Consensus         2 ~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~-~~~~---~~~~~~~-----g~~~-------~~~~~e~~~~~d~vi~   64 (296)
T PRK11559          2 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDR-NPEA---VAEVIAA-----GAET-------ASTAKAVAEQCDVIIT   64 (296)
T ss_pred             CceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcC-CHHH---HHHHHHC-----CCee-------cCCHHHHHhcCCEEEE
Confidence            36899999 899999999999999999999888 6543   2222221     1111       1234556778999998


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        65 ~vp   67 (296)
T PRK11559         65 MLP   67 (296)
T ss_pred             eCC
Confidence            854

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.01  E-value=0.039  Score=42.89  Aligned_cols=56  Identities=23%  Similarity=0.192  Sum_probs=46.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|+|.|.+..+|..|+..|.++|..|+...+ +.                             .++++..+++|+||
T Consensus        27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~-~t-----------------------------~~l~~~v~~ADIVv   76 (140)
T cd05212          27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDW-KT-----------------------------IQLQSKVHDADVVV   76 (140)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCC-CC-----------------------------cCHHHHHhhCCEEE
Confidence            5789999999999999999999999999998755 21                             13566778889999


Q ss_pred             EeccCC
Q 019415           85 HVATPL   90 (341)
Q Consensus        85 ~~a~~~   90 (341)
                      -..+..
T Consensus        77 sAtg~~   82 (140)
T cd05212          77 VGSPKP   82 (140)
T ss_pred             EecCCC
Confidence            888765

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=95.99  E-value=0.081  Score=47.50  Aligned_cols=37  Identities=27%  Similarity=0.129  Sum_probs=32.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      .+.+|||+||+|-+|..+++.+...|.+|+++++ +.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~-s~~  174 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAG-SDE  174 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC-CHH
Confidence            4568999999999999999888888999998887 543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.99  E-value=0.026  Score=52.63  Aligned_cols=72  Identities=22%  Similarity=0.233  Sum_probs=50.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhh-hCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLK-SLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      .+++|+|+|+ |-+|..+++.|...| .+|+++.| +..+   ...+. .+.     ...+     +.+++.+.+.++|+
T Consensus       179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~r-s~~r---a~~la~~~g-----~~~i-----~~~~l~~~l~~aDv  243 (417)
T TIGR01035       179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANR-TYER---AEDLAKELG-----GEAV-----KFEDLEEYLAEADI  243 (417)
T ss_pred             cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeC-CHHH---HHHHHHHcC-----CeEe-----eHHHHHHHHhhCCE
Confidence            4579999995 999999999999999 78999999 6543   22221 211     1122     22457777889999


Q ss_pred             EEEeccCCc
Q 019415           83 VFHVATPLQ   91 (341)
Q Consensus        83 Vi~~a~~~~   91 (341)
                      ||.+.+...
T Consensus       244 Vi~aT~s~~  252 (417)
T TIGR01035       244 VISSTGAPH  252 (417)
T ss_pred             EEECCCCCC
Confidence            999966443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=95.98  E-value=0.025  Score=50.77  Aligned_cols=74  Identities=24%  Similarity=0.244  Sum_probs=48.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~V   83 (341)
                      .+.++||+||+|.+|..+++.+...|.+|++++| +...   .+.+....    ...++  +..+ .+.+.+. .+.|+|
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~-~~~~---~~~~~~~~----~~~~~--~~~~~~~~~~~~-~~~d~v  230 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTR-SPEK---LKILKELG----ADYVI--DGSKFSEDVKKL-GGADVV  230 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeC-CHHH---HHHHHHcC----CcEEE--ecHHHHHHHHhc-cCCCEE
Confidence            3568999999999999999999999999999888 6533   22232221    11112  2211 1222222 268999


Q ss_pred             EEeccC
Q 019415           84 FHVATP   89 (341)
Q Consensus        84 i~~a~~   89 (341)
                      +++++.
T Consensus       231 ~~~~g~  236 (332)
T cd08259         231 IELVGS  236 (332)
T ss_pred             EECCCh
Confidence            999763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=95.98  E-value=0.039  Score=48.77  Aligned_cols=81  Identities=14%  Similarity=0.171  Sum_probs=52.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      -||.|.||+||.|..|++.|.... .++..+.- +.                 .     .+   +.+..++++++|+||.
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s-~~-----------------~-----~~---~~~~~~~~~~~D~vFl   55 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAP-DR-----------------R-----KD---AAERAKLLNAADVAIL   55 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEec-cc-----------------c-----cC---cCCHhHhhcCCCEEEE
Confidence            379999999999999999999985 35555432 11                 0     11   1123456678999888


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +.....                 ...++..+.+.+  .++|=.|++.
T Consensus        56 alp~~~-----------------s~~~~~~~~~~g--~~VIDlSadf   83 (310)
T TIGR01851        56 CLPDDA-----------------AREAVSLVDNPN--TCIIDASTAY   83 (310)
T ss_pred             CCCHHH-----------------HHHHHHHHHhCC--CEEEECChHH
Confidence            754321                 224444555556  5688888875

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.98  E-value=0.0075  Score=53.34  Aligned_cols=37  Identities=19%  Similarity=0.196  Sum_probs=32.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS   45 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   45 (341)
                      ++|.|+| .|.+|..++..|++.|++|++.++ +.+...
T Consensus         2 ~~V~VIG-~G~mG~~iA~~la~~G~~V~~~d~-~~~~~~   38 (288)
T PRK09260          2 EKLVVVG-AGVMGRGIAYVFAVSGFQTTLVDI-KQEQLE   38 (288)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHhCCCcEEEEeC-CHHHHH
Confidence            5799999 599999999999999999999999 765533

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.98  E-value=0.035  Score=49.55  Aligned_cols=67  Identities=13%  Similarity=0.234  Sum_probs=49.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+| .|.||+.+++.|..-|.+|++.+| ....             ..++..+    ....++.++++++|+|+
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~-~~~~-------------~~~~~~~----~~~~~l~e~l~~aDvvv  195 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSR-SRKS-------------WPGVQSF----AGREELSAFLSQTRVLI  195 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CCCC-------------CCCceee----cccccHHHHHhcCCEEE
Confidence            457999999 999999999999999999999887 4432             0111111    12456889999999999


Q ss_pred             EeccCC
Q 019415           85 HVATPL   90 (341)
Q Consensus        85 ~~a~~~   90 (341)
                      .+....
T Consensus       196 ~~lPlt  201 (312)
T PRK15469        196 NLLPNT  201 (312)
T ss_pred             ECCCCC
Confidence            886543

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.95  E-value=0.036  Score=48.81  Aligned_cols=75  Identities=16%  Similarity=0.105  Sum_probs=48.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +.++|+|+| +|..|++++..|.+.|. +|+++.| +..+...+.  ..+........+...     +++.+.+.++|+|
T Consensus       126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR-~~~ka~~la--~~l~~~~~~~~~~~~-----~~~~~~~~~aDiV  196 (284)
T PRK12549        126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDV-DPARAAALA--DELNARFPAARATAG-----SDLAAALAAADGL  196 (284)
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECC-CHHHHHHHH--HHHHhhCCCeEEEec-----cchHhhhCCCCEE
Confidence            357899999 57799999999999996 7999999 764432221  111111112222221     2345566789999


Q ss_pred             EEecc
Q 019415           84 FHVAT   88 (341)
Q Consensus        84 i~~a~   88 (341)
                      |++..
T Consensus       197 InaTp  201 (284)
T PRK12549        197 VHATP  201 (284)
T ss_pred             EECCc
Confidence            99943

>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein

Probab=95.94  E-value=0.027  Score=51.39  Aligned_cols=66  Identities=21%  Similarity=0.303  Sum_probs=49.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|+|| |.+|..+++.+.+.|++|++++. ++.. .. ..+        .-+++.++..|++.+.++.+.+|+|..
T Consensus         1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~-~~~~-p~-~~~--------ad~~~~~~~~d~~~i~~~a~~~dvit~   66 (352)
T TIGR01161         1 TVGILGG-GQLGRMLALAARPLGIKVHVLDP-DANS-PA-VQV--------ADHVVLAPFFDPAAIRELAESCDVITF   66 (352)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEECC-CCCC-Ch-hHh--------CceeEeCCCCCHHHHHHHHhhCCEEEe
Confidence            4889996 89999999999999999999877 5432 10 011        112457888999999999999998743

Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.89  E-value=0.12  Score=47.37  Aligned_cols=105  Identities=19%  Similarity=0.289  Sum_probs=65.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhh----hHhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKV----DLLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~----~~~~~~~~~~~~~~~~~   64 (341)
                      ..+|+|+| .|-+|++++..|+..|. +++++++ +.-.                ..|.    +.+..+.. .-.++.+.
T Consensus        41 ~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~-D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np-~v~i~~~~  117 (370)
T PRK05600         41 NARVLVIG-AGGLGCPAMQSLASAGVGTITLIDD-DTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQP-DIRVNALR  117 (370)
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-CEEccccccccccCChhHCCCHHHHHHHHHHHHHCC-CCeeEEee
Confidence            46899999 78899999999999994 7777765 4211                1111    11222211 12455555


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ..++ ++.+.++++++|+||.|.....                .-..+-++|.+.+  ..+|+.+..+
T Consensus       118 ~~i~-~~~~~~~~~~~DlVid~~Dn~~----------------~r~~in~~~~~~~--iP~v~~~~~g  166 (370)
T PRK05600        118 ERLT-AENAVELLNGVDLVLDGSDSFA----------------TKFLVADAAEITG--TPLVWGTVLR  166 (370)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCCHH----------------HHHHHHHHHHHcC--CCEEEEEEec
Confidence            5554 4567778899999999854311                1223456677777  4477766543

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=95.89  E-value=0.025  Score=39.28  Aligned_cols=32  Identities=34%  Similarity=0.429  Sum_probs=29.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      ||+|+| +|++|-.++..|.+.|.+|+++.| +.
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g~~vtli~~-~~   32 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELGKEVTLIER-SD   32 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTTSEEEEEES-SS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhCcEEEEEec-cc
Confidence            588888 899999999999999999999998 54

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.88  E-value=0.031  Score=52.27  Aligned_cols=73  Identities=27%  Similarity=0.295  Sum_probs=50.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .+++|+|+| +|-+|..+++.|...|. +|+++.| +..+   ...+...-    +.     +..+.+++.+.+.++|+|
T Consensus       181 ~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r-~~~r---a~~la~~~----g~-----~~~~~~~~~~~l~~aDvV  246 (423)
T PRK00045        181 SGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANR-TLER---AEELAEEF----GG-----EAIPLDELPEALAEADIV  246 (423)
T ss_pred             cCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeC-CHHH---HHHHHHHc----CC-----cEeeHHHHHHHhccCCEE
Confidence            458999999 59999999999999996 7999888 6533   22222210    11     122235567778899999


Q ss_pred             EEeccCCc
Q 019415           84 FHVATPLQ   91 (341)
Q Consensus        84 i~~a~~~~   91 (341)
                      |.+.+...
T Consensus       247 I~aT~s~~  254 (423)
T PRK00045        247 ISSTGAPH  254 (423)
T ss_pred             EECCCCCC
Confidence            99976444

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=95.88  E-value=0.046  Score=53.11  Aligned_cols=71  Identities=17%  Similarity=0.103  Sum_probs=52.9

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .++|+|+|+| +|++|+.+++.+.+.|++|++++. +... .. ..+        .-..+.++..|.+.+.++.+++|+|
T Consensus        20 ~~~k~IgIIG-gGqlg~mla~aA~~lG~~Vi~ld~-~~~a-pa-~~~--------AD~~~v~~~~D~~~l~~~a~~~dvI   87 (577)
T PLN02948         20 VSETVVGVLG-GGQLGRMLCQAASQMGIKVKVLDP-LEDC-PA-SSV--------AARHVVGSFDDRAAVREFAKRCDVL   87 (577)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CCCC-ch-hhh--------CceeeeCCCCCHHHHHHHHHHCCEE
Confidence            3457999999 679999999999999999999877 5432 10 000        1134558888999888888889988


Q ss_pred             EEe
Q 019415           84 FHV   86 (341)
Q Consensus        84 i~~   86 (341)
                      ...
T Consensus        88 t~e   90 (577)
T PLN02948         88 TVE   90 (577)
T ss_pred             EEe
Confidence            544

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.86  E-value=0.15  Score=43.51  Aligned_cols=107  Identities=15%  Similarity=0.208  Sum_probs=64.4

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhh----hHhhhCCCCCCceEEEecC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKV----DLLKSLPGAETRLIFFEAE   66 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~----~~~~~~~~~~~~~~~~~~D   66 (341)
                      ||||+| .|-+|+++++.|+..|. ++++++. +.-.                +.|.    +.+..+.. .-++..+..+
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~-D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np-~v~i~~~~~~   77 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDM-DTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNP-NCKVVPYQNK   77 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeC-CEEcchhhccccCCChhhCChHHHHHHHHHHHHHCC-CCEEEEEecc
Confidence            589998 88899999999999984 5666654 3211                1111    11222211 1245666677


Q ss_pred             CCChHHH-HHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccC
Q 019415           67 IYDPDTF-ENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASP  136 (341)
Q Consensus        67 l~~~~~~-~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~  136 (341)
                      +.+.+.+ ...+++.|+||.+...                ...-..+-+.|.+.+  ..+|..++.+ ..|
T Consensus        78 i~~~~~~~~~f~~~~DvVi~a~Dn----------------~~aR~~ln~~c~~~~--iplI~~g~~G-~~G  129 (234)
T cd01484          78 VGPEQDFNDTFFEQFHIIVNALDN----------------IIARRYVNGMLIFLI--VPLIESGTEG-FKG  129 (234)
T ss_pred             CChhhhchHHHHhCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEcccC-Cce
Confidence            7554333 4567889999987321                222344666677776  5677777755 443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=95.86  E-value=0.028  Score=50.39  Aligned_cols=38  Identities=29%  Similarity=0.454  Sum_probs=33.2

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      |.+ +.|+|+|+| .|-||..++..|.+.|++|+++.| +.
T Consensus         1 ~~~-~~m~I~IiG-~GaiG~~lA~~L~~~g~~V~~~~r-~~   38 (313)
T PRK06249          1 MDS-ETPRIGIIG-TGAIGGFYGAMLARAGFDVHFLLR-SD   38 (313)
T ss_pred             CCC-cCcEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEe-CC
Confidence            444 358999997 899999999999999999999999 64

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.85  E-value=0.031  Score=48.79  Aligned_cols=58  Identities=19%  Similarity=0.179  Sum_probs=46.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+|.+|.+|..++..|+++|+.|++.-.  ..                            .++.+..+++|+||
T Consensus       157 ~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s--~t----------------------------~~l~~~~~~ADIVI  206 (284)
T PRK14179        157 EGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS--RT----------------------------RNLAEVARKADILV  206 (284)
T ss_pred             CCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC--CC----------------------------CCHHHHHhhCCEEE
Confidence            5789999999999999999999999999998611  10                            03566777899999


Q ss_pred             EeccCCcc
Q 019415           85 HVATPLQH   92 (341)
Q Consensus        85 ~~a~~~~~   92 (341)
                      -+.|....
T Consensus       207 ~avg~~~~  214 (284)
T PRK14179        207 VAIGRGHF  214 (284)
T ss_pred             EecCcccc
Confidence            99886554

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.85  E-value=0.12  Score=46.41  Aligned_cols=75  Identities=21%  Similarity=0.143  Sum_probs=49.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHH---HHh--cC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFE---NAI--QG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~~--~~   79 (341)
                      .+.+|+|+|++|-+|..+++.+...|.+|+++++ +...   .+.+....     .. ...|..+.+...   ...  .+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~-~~~~---~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~  235 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAG-SEDK---LERAKELG-----AD-YVIDYRKEDFVREVRELTGKRG  235 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHcC-----CC-eEEecCChHHHHHHHHHhCCCC
Confidence            4578999999999999999999999999999888 5533   23332221     11 112444433333   222  25


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      .|+++++++.
T Consensus       236 ~d~~i~~~g~  245 (342)
T cd08266         236 VDVVVEHVGA  245 (342)
T ss_pred             CcEEEECCcH
Confidence            8999999873

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=95.85  E-value=0.026  Score=50.68  Aligned_cols=98  Identities=13%  Similarity=0.064  Sum_probs=62.9

Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCY  154 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~  154 (341)
                      ++..+|.+-|...............+...-+..|+++..    +.+ .+++|.++|....-   .               
T Consensus       203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~~---~---------------  263 (410)
T PF08732_consen  203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNNA---I---------------  263 (410)
T ss_pred             hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcch---h---------------
Confidence            356777777765543311111122233333444555554    566 79999999965211   1               


Q ss_pred             CCCCCCCccCcchhhhHHHhHHHHHHHHHhhccC-CceEEEEecCceeCCCCC
Q 019415          155 TPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAGDTNL  206 (341)
Q Consensus       155 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~vlRp~~v~G~~~~  206 (341)
                                 ....+|...|...|+.+...... =-..+|||||.+.|....
T Consensus       264 -----------s~~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  264 -----------SSMFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             -----------hhhhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence                       22478999999999999877532 348999999999998777

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=95.84  E-value=0.067  Score=48.44  Aligned_cols=103  Identities=19%  Similarity=0.176  Sum_probs=59.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCC------CCceE-EEecCCCChHHHHHHh
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGA------ETRLI-FFEAEIYDPDTFENAI   77 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~-~~~~Dl~~~~~~~~~~   77 (341)
                      ++||.|.|+ |.||+.+++.+.++ +.+|.++.. ...  .....+....+.      +.... +-..++.-.+.+..++
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d-~~~--~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~   76 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAK-TKP--DYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLL   76 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEEC-CCh--HHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhh
Confidence            469999998 99999999998876 478887765 321  222211110000      00000 0000111112244556


Q ss_pred             cCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           78 QGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        78 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      .++|+||.|.+....                 ...++.+.+.|  +++|+-|+.
T Consensus        77 ~~vDVVIdaT~~~~~-----------------~e~a~~~~~aG--k~VI~~~~~  111 (341)
T PRK04207         77 EKADIVVDATPGGVG-----------------AKNKELYEKAG--VKAIFQGGE  111 (341)
T ss_pred             ccCCEEEECCCchhh-----------------HHHHHHHHHCC--CEEEEcCCC
Confidence            789999999764332                 34556777777  678877775

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=95.84  E-value=0.011  Score=49.21  Aligned_cols=176  Identities=16%  Similarity=0.167  Sum_probs=91.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC---CC-e-EEEEecCCCCch-hhhhHhh-hCCCCCCceE--EEecCCCChHHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK---GY-I-VHTTLRPNLEDK-SKVDLLK-SLPGAETRLI--FFEAEIYDPDTFEN   75 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~---g~-~-V~~~~r~~~~~~-~~~~~~~-~~~~~~~~~~--~~~~Dl~~~~~~~~   75 (341)
                      ..-|||||||+|.||.+|+-.+++-   |. + ++..-- +.+.. ..++-.. .++   +..-  ....+.+  .+-..
T Consensus         3 epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lL-di~~~~~~LegV~mELq---D~a~PlL~~Vvat--td~~~   76 (332)
T KOG1496|consen    3 EPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLL-DIPPMMSVLEGVKMELQ---DCALPLLKGVVAT--TDEVE   76 (332)
T ss_pred             CceEEEeecccchhhHHHHHHHcCceeecCCCceEEEee-CCchHHHHHHHHHHHHH---hhhhhHHHhhhcc--cChhh
Confidence            3579999999999999999887763   21 1 222111 11110 1111000 000   0000  0111111  12345


Q ss_pred             HhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           76 AIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        76 ~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                      +|++.|+.|-..+...... ....+++..|+...+.=-.+..+..  ++ +++.++-.+-....-..   .+-..++|  
T Consensus        77 afkdv~~ailvGa~PR~eG-MERkDll~~NvkIfk~Qg~AL~k~A~~~~-KVlVVgNPaNTNali~~---k~ApsIP~--  149 (332)
T KOG1496|consen   77 AFKDVDVAILVGAMPRREG-MERKDLLSANVKIFKSQGAALEKYAKPNV-KVLVVGNPANTNALILK---KFAPSIPE--  149 (332)
T ss_pred             hhccCcEEEEeccccCccc-chhhhHHhhcceeehhhhHHHHHhcCCCc-eEEEecCccccchhHHh---hhCCCCch--
Confidence            7788999999888766543 2244778888776665555554443  23 44444433210000000   00112222  


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCC
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLP  207 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~  207 (341)
                                    .+....++..-.+.+.+++ ..|.++.-+.--.|+|.+...
T Consensus       150 --------------kNfs~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNHSsT  190 (332)
T KOG1496|consen  150 --------------KNFSALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNHSST  190 (332)
T ss_pred             --------------hcchhhhhhchhhHHHHHHHhhCCchhhcceeEEecccccc
Confidence                          3455556666666666666 568888888888899986554

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.83  E-value=0.013  Score=51.73  Aligned_cols=38  Identities=21%  Similarity=0.112  Sum_probs=33.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS   45 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   45 (341)
                      .++|.|+| +|.+|..++..|+..|++|+++++ +++...
T Consensus         5 ~~~V~ViG-aG~mG~~iA~~~a~~G~~V~l~d~-~~~~~~   42 (286)
T PRK07819          5 IQRVGVVG-AGQMGAGIAEVCARAGVDVLVFET-TEELAT   42 (286)
T ss_pred             ccEEEEEc-ccHHHHHHHHHHHhCCCEEEEEEC-CHHHHH
Confidence            35899999 599999999999999999999999 776533

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=95.82  E-value=0.063  Score=47.75  Aligned_cols=35  Identities=26%  Similarity=0.272  Sum_probs=31.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      |+|.|+| .|.+|..+++.|++.|++|++.+| +.+.
T Consensus         1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr-~~~~   35 (299)
T PRK12490          1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDV-NQEA   35 (299)
T ss_pred             CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEEC-CHHH
Confidence            4799998 999999999999999999999988 6543

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.82  E-value=0.057  Score=41.19  Aligned_cols=33  Identities=30%  Similarity=0.408  Sum_probs=27.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r   38 (341)
                      ..+||-|+| .|.+|.+|.+.|.+.||.|..+ +|
T Consensus         9 ~~l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~sr   42 (127)
T PF10727_consen    9 ARLKIGIIG-AGRVGTALARALARAGHEVVGVYSR   42 (127)
T ss_dssp             ---EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSC
T ss_pred             CccEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeC
Confidence            358999999 5999999999999999999887 45

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=95.81  E-value=0.0072  Score=53.52  Aligned_cols=64  Identities=27%  Similarity=0.353  Sum_probs=45.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEec
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVA   87 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~a   87 (341)
                      +|.|+| .|.+|..+++.|++.|++|++.+| +...   .+.+...     +..       ...+..++++++|+||-+.
T Consensus         1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr-~~~~---~~~~~~~-----g~~-------~~~~~~~~~~~aDivi~~v   63 (291)
T TIGR01505         1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTI-GPEV---ADELLAA-----GAV-------TAETARQVTEQADVIFTMV   63 (291)
T ss_pred             CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcC-CHHH---HHHHHHC-----CCc-------ccCCHHHHHhcCCEEEEec
Confidence            478888 899999999999999999999988 6533   3333321     111       1123556778899999886


Q ss_pred             c
Q 019415           88 T   88 (341)
Q Consensus        88 ~   88 (341)
                      .
T Consensus        64 p   64 (291)
T TIGR01505        64 P   64 (291)
T ss_pred             C
Confidence            5

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=95.79  E-value=0.011  Score=52.42  Aligned_cols=65  Identities=23%  Similarity=0.268  Sum_probs=46.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      ++|.|+| .|.+|..+++.|++.|++|++.+| +..+   .+.+...     +..       ...+..++++++|+||-+
T Consensus         2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~-~~~~---~~~~~~~-----g~~-------~~~s~~~~~~~aDvVi~~   64 (296)
T PRK15461          2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDV-NPQA---VDALVDK-----GAT-------PAASPAQAAAGAEFVITM   64 (296)
T ss_pred             CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcC-CHHH---HHHHHHc-----CCc-------ccCCHHHHHhcCCEEEEe
Confidence            4799998 999999999999999999999988 6543   2333221     111       112345567788998888


Q ss_pred             cc
Q 019415           87 AT   88 (341)
Q Consensus        87 a~   88 (341)
                      ..
T Consensus        65 vp   66 (296)
T PRK15461         65 LP   66 (296)
T ss_pred             cC
Confidence            54

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.79  E-value=0.017  Score=51.67  Aligned_cols=41  Identities=20%  Similarity=0.135  Sum_probs=34.3

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS   45 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~   45 (341)
                      |+.  .++|.|+| .|.+|..++..|++.|++|+++++ +.....
T Consensus         1 ~~~--~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~-~~~~~~   41 (311)
T PRK06130          1 MNP--IQNLAIIG-AGTMGSGIAALFARKGLQVVLIDV-MEGALE   41 (311)
T ss_pred             CCC--ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEEC-CHHHHH
Confidence            553  37899998 699999999999999999999988 765433

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.78  E-value=0.043  Score=47.87  Aligned_cols=58  Identities=17%  Similarity=0.229  Sum_probs=47.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+|.+..+|+.|+..|+++|..|++.-+ .-                             .++.+..+++|+||
T Consensus       158 ~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs-~T-----------------------------~~l~~~~~~ADIvi  207 (285)
T PRK10792        158 YGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHR-FT-----------------------------KNLRHHVRNADLLV  207 (285)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHCCCeEEEEEC-CC-----------------------------CCHHHHHhhCCEEE
Confidence            4789999999999999999999999999998755 21                             13666777889999


Q ss_pred             EeccCCcc
Q 019415           85 HVATPLQH   92 (341)
Q Consensus        85 ~~a~~~~~   92 (341)
                      ..+|....
T Consensus       208 ~avG~p~~  215 (285)
T PRK10792        208 VAVGKPGF  215 (285)
T ss_pred             EcCCCccc
Confidence            99886553

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=95.78  E-value=0.022  Score=50.96  Aligned_cols=75  Identities=19%  Similarity=0.221  Sum_probs=59.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH-HHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD-TFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~d~V   83 (341)
                      +++||++| +|||.+.++..|.+++ .+|++.+| ...   ..+.+..-    ..++.+..|+.+++ .+.+..+..|.|
T Consensus         2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~-~~~---~~~~~~~~----~~~~av~ldv~~~~~~L~~~v~~~D~v   72 (445)
T KOG0172|consen    2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASR-TLK---DAEALVKG----INIKAVSLDVADEELALRKEVKPLDLV   72 (445)
T ss_pred             CcceEEec-CccccchHHHHHhhcCCceEEEehh-hHH---HHHHHhcC----CCccceEEEccchHHHHHhhhccccee
Confidence            47899999 9999999999999986 68888888 543   23333332    24888999999987 888888999999


Q ss_pred             EEeccC
Q 019415           84 FHVATP   89 (341)
Q Consensus        84 i~~a~~   89 (341)
                      +-+-..
T Consensus        73 iSLlP~   78 (445)
T KOG0172|consen   73 ISLLPY   78 (445)
T ss_pred             eeeccc
Confidence            887543

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.78  E-value=0.099  Score=45.16  Aligned_cols=98  Identities=20%  Similarity=0.151  Sum_probs=59.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH----hcCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA----IQGC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~----~~~~   80 (341)
                      .+.+|||+|++| +|..+++.+...|.+|+++++ +...   .+.+....    ..++  .|..+.+....+    -.+.
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~-~~~~---~~~~~~~g----~~~~--~~~~~~~~~~~~~~~~~~~~  202 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDR-SDEK---LELAKELG----ADHV--IDYKEEDLEEELRLTGGGGA  202 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcC-CHHH---HHHHHHhC----Ccee--ccCCcCCHHHHHHHhcCCCC
Confidence            457899999999 999999999999999999888 5433   23333221    1111  223222222221    2368


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |+|+++++...                ....+++.+...   .+++.++...
T Consensus       203 d~vi~~~~~~~----------------~~~~~~~~l~~~---G~~v~~~~~~  235 (271)
T cd05188         203 DVVIDAVGGPE----------------TLAQALRLLRPG---GRIVVVGGTS  235 (271)
T ss_pred             CEEEECCCCHH----------------HHHHHHHhcccC---CEEEEEccCC
Confidence            99999876321                122344444443   4788877754

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.77  E-value=0.081  Score=46.97  Aligned_cols=25  Identities=32%  Similarity=0.529  Sum_probs=23.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG   30 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g   30 (341)
                      +++|.|.||||.+|+.+++.|.++.
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~   25 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERH   25 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcC
Confidence            4789999999999999999999965

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.75  E-value=0.025  Score=51.32  Aligned_cols=81  Identities=17%  Similarity=0.159  Sum_probs=47.8

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +.+|||.|+| +|.+|..++..|.+.| .|+...| +......+..... ......+... ..++.-..++..+++++|+
T Consensus         5 ~~~mkI~IiG-aGa~G~alA~~La~~g-~v~l~~~-~~~~~~~i~~~~~~~~~l~~~~~l-~~~i~~t~d~~~a~~~aDl   80 (341)
T PRK12439          5 KREPKVVVLG-GGSWGTTVASICARRG-PTLQWVR-SAETADDINDNHRNSRYLGNDVVL-SDTLRATTDFAEAANCADV   80 (341)
T ss_pred             cCCCeEEEEC-CCHHHHHHHHHHHHCC-CEEEEeC-CHHHHHHHHhcCCCcccCCCCccc-CCCeEEECCHHHHHhcCCE
Confidence            3568999999 7999999999999998 6777778 6543222221110 0011111111 1122122345566788898


Q ss_pred             EEEecc
Q 019415           83 VFHVAT   88 (341)
Q Consensus        83 Vi~~a~   88 (341)
                      ||-+.-
T Consensus        81 Vilavp   86 (341)
T PRK12439         81 VVMGVP   86 (341)
T ss_pred             EEEEeC
Confidence            887744

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.74  E-value=0.008  Score=53.12  Aligned_cols=35  Identities=26%  Similarity=0.208  Sum_probs=31.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      ++|.|+| +|.+|..++..|++.|++|++.++ +...
T Consensus         4 ~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~-~~~~   38 (287)
T PRK08293          4 KNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDI-SDEA   38 (287)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeC-CHHH
Confidence            6899998 699999999999999999999998 7654

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.72  E-value=0.019  Score=51.28  Aligned_cols=80  Identities=18%  Similarity=0.120  Sum_probs=49.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-H----hhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-L----LKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|.|+| +|.+|+.++..|+..|++|++.++ ++....... .    +..+.............+.-..+++++++++|
T Consensus         8 ~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD   85 (321)
T PRK07066          8 KTFAAIG-SGVIGSGWVARALAHGLDVVAWDP-APGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD   85 (321)
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeC-CHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence            6899999 799999999999999999999988 765422211 1    11110000000000011122234677889999


Q ss_pred             EEEEecc
Q 019415           82 FVFHVAT   88 (341)
Q Consensus        82 ~Vi~~a~   88 (341)
                      .||-++.
T Consensus        86 lViEavp   92 (321)
T PRK07066         86 FIQESAP   92 (321)
T ss_pred             EEEECCc
Confidence            9998853

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=95.70  E-value=0.084  Score=50.06  Aligned_cols=41  Identities=17%  Similarity=0.288  Sum_probs=36.3

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      |+....++|-++| .|.+|+.+++.|++.|++|++..| +.++
T Consensus         1 ~~~~~~~~IG~IG-LG~MG~~mA~nL~~~G~~V~V~NR-t~~k   41 (493)
T PLN02350          1 MASAALSRIGLAG-LAVMGQNLALNIAEKGFPISVYNR-TTSK   41 (493)
T ss_pred             CCCCCCCCEEEEe-eHHHHHHHHHHHHhCCCeEEEECC-CHHH
Confidence            6666678899999 999999999999999999999999 6644

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.70  E-value=0.24  Score=42.08  Aligned_cols=106  Identities=25%  Similarity=0.321  Sum_probs=61.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhh----hHhhhCCCCCCceEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKV----DLLKSLPGAETRLIFF   63 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~----~~~~~~~~~~~~~~~~   63 (341)
                      +..+|+|+| .|-+|+++++.|+..|. ++++++. +.-.                ..|.    +.+..+.+ .-.++.+
T Consensus        10 ~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~-D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP-~~~V~~~   86 (231)
T cd00755          10 RNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDF-DVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINP-ECEVDAV   86 (231)
T ss_pred             hCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECC-CEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCC-CcEEEEe
Confidence            346899999 88899999999999994 6666654 3211                0111    11222211 1134444


Q ss_pred             ecCCCChHHHHHHhc-CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           64 EAEIYDPDTFENAIQ-GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        64 ~~Dl~~~~~~~~~~~-~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ...++ ++.+..++. ++|+||.+....                ..-..+.+.|.+.+  ..||...+++
T Consensus        87 ~~~i~-~~~~~~l~~~~~D~VvdaiD~~----------------~~k~~L~~~c~~~~--ip~I~s~g~g  137 (231)
T cd00755          87 EEFLT-PDNSEDLLGGDPDFVVDAIDSI----------------RAKVALIAYCRKRK--IPVISSMGAG  137 (231)
T ss_pred             eeecC-HhHHHHHhcCCCCEEEEcCCCH----------------HHHHHHHHHHHHhC--CCEEEEeCCc
Confidence            44443 445566664 689999984321                22345678888887  4466554433

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PLN00203 glutamyl-tRNA reductase

Probab=95.67  E-value=0.044  Score=52.30  Aligned_cols=75  Identities=25%  Similarity=0.355  Sum_probs=51.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ..++|+|+|+ |-+|..+++.|...|. +|+++.| +..+   ...+.. ++    +.....   ...+++..++.++|+
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nR-s~er---a~~La~~~~----g~~i~~---~~~~dl~~al~~aDV  332 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNR-SEER---VAALREEFP----DVEIIY---KPLDEMLACAAEADV  332 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeC-CHHH---HHHHHHHhC----CCceEe---ecHhhHHHHHhcCCE
Confidence            4689999996 9999999999999995 7999999 6643   233322 11    111111   222346677889999


Q ss_pred             EEEeccCCc
Q 019415           83 VFHVATPLQ   91 (341)
Q Consensus        83 Vi~~a~~~~   91 (341)
                      ||.+.+...
T Consensus       333 VIsAT~s~~  341 (519)
T PLN00203        333 VFTSTSSET  341 (519)
T ss_pred             EEEccCCCC
Confidence            998865444

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.67  E-value=0.17  Score=46.83  Aligned_cols=105  Identities=17%  Similarity=0.199  Sum_probs=63.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhhh----HhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKVD----LLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~----~~~~~~~~~~~~~~~~   64 (341)
                      ..+|||+| .|-+|++++..|+..|. ++++++. +.-.                ..|.+    .+..+.. .-.+..+.
T Consensus        42 ~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~-D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np-~v~i~~~~  118 (392)
T PRK07878         42 NARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEF-DVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINP-LVNVRLHE  118 (392)
T ss_pred             cCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC-CEecCcccccccccChhcCCChHHHHHHHHHHHhCC-CcEEEEEe
Confidence            46899999 78899999999999985 5666543 3211                11111    1222211 11344455


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ..++ .+...++++++|+||.+....                ..-..+-++|.+.+  ..||+.+..+
T Consensus       119 ~~i~-~~~~~~~~~~~D~Vvd~~d~~----------------~~r~~ln~~~~~~~--~p~v~~~~~g  167 (392)
T PRK07878        119 FRLD-PSNAVELFSQYDLILDGTDNF----------------ATRYLVNDAAVLAG--KPYVWGSIYR  167 (392)
T ss_pred             ccCC-hhHHHHHHhcCCEEEECCCCH----------------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            5554 345677888999999884321                11223557788877  5588877765

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.66  E-value=0.026  Score=45.56  Aligned_cols=79  Identities=25%  Similarity=0.168  Sum_probs=50.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCC------------------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI------------------   67 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl------------------   67 (341)
                      +.+|+|+| +|.+|..-++.|...|.+|+.+.. +.....   .+...     ....+..+.                  
T Consensus        20 p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~-~~~~~~---~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~   89 (168)
T PF01262_consen   20 PAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDE-RPERLR---QLESL-----GAYFIEVDYEDHLERKDFDKADYYEHP   89 (168)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEES-SHHHHH---HHHHT-----TTEESEETTTTTTTSB-CCHHHCHHHC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccC-CHHHHH---hhhcc-----cCceEEEcccccccccccchhhhhHHH
Confidence            46899998 999999999999999999999988 654322   22221     122222221                  


Q ss_pred             -CChHHHHHHhcCCCEEEEeccCCcccc
Q 019415           68 -YDPDTFENAIQGCDFVFHVATPLQHID   94 (341)
Q Consensus        68 -~~~~~~~~~~~~~d~Vi~~a~~~~~~~   94 (341)
                       .....+.+.+..+|+||..+-.+....
T Consensus        90 ~~~~~~f~~~i~~~d~vI~~~~~~~~~~  117 (168)
T PF01262_consen   90 ESYESNFAEFIAPADIVIGNGLYWGKRA  117 (168)
T ss_dssp             CHHHHHHHHHHHH-SEEEEHHHBTTSS-
T ss_pred             HHhHHHHHHHHhhCcEEeeecccCCCCC
Confidence             112456666778999998777666543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.65  E-value=0.057  Score=47.14  Aligned_cols=58  Identities=19%  Similarity=0.130  Sum_probs=46.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+|.+..+|+.++..|+++|..|+++-. .                             ..++.+.++++|+||
T Consensus       156 ~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs-~-----------------------------t~~l~~~~~~ADIvV  205 (285)
T PRK14191        156 KGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI-L-----------------------------TKDLSFYTQNADIVC  205 (285)
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC-C-----------------------------cHHHHHHHHhCCEEE
Confidence            5789999999999999999999999999988633 1                             123566777889999


Q ss_pred             EeccCCcc
Q 019415           85 HVATPLQH   92 (341)
Q Consensus        85 ~~a~~~~~   92 (341)
                      -++|....
T Consensus       206 ~AvG~p~~  213 (285)
T PRK14191        206 VGVGKPDL  213 (285)
T ss_pred             EecCCCCc
Confidence            88876554

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.65  E-value=0.035  Score=48.28  Aligned_cols=71  Identities=17%  Similarity=0.213  Sum_probs=54.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      ..||+++| +|=+|+.++-.+...|.+|++++| -...          |..+---.-+..|..|.+.+...++  ++|.|
T Consensus        12 a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDr-Y~~A----------PAmqVAhrs~Vi~MlD~~al~avv~rekPd~I   79 (394)
T COG0027          12 ATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDR-YANA----------PAMQVAHRSYVIDMLDGDALRAVVEREKPDYI   79 (394)
T ss_pred             CeEEEEec-CCccchHHHHHHHhcCCEEEEecC-cCCC----------hhhhhhhheeeeeccCHHHHHHHHHhhCCCee
Confidence            46899999 999999999999999999999998 4432          2222222346688999999999986  68988


Q ss_pred             EEecc
Q 019415           84 FHVAT   88 (341)
Q Consensus        84 i~~a~   88 (341)
                      |--..
T Consensus        80 VpEiE   84 (394)
T COG0027          80 VPEIE   84 (394)
T ss_pred             eehhh
Confidence            86543

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.64  E-value=0.049  Score=47.54  Aligned_cols=57  Identities=18%  Similarity=0.187  Sum_probs=46.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+|.++.+|+.|+..|.++|..|++..+ .                             ..++.+.++..|+||
T Consensus       157 ~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs-~-----------------------------t~~l~~~~~~ADIVV  206 (285)
T PRK14189        157 RGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS-K-----------------------------TRDLAAHTRQADIVV  206 (285)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC-C-----------------------------CCCHHHHhhhCCEEE
Confidence            5689999999999999999999999999988633 1                             113567777889999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      -++|...
T Consensus       207 ~avG~~~  213 (285)
T PRK14189        207 AAVGKRN  213 (285)
T ss_pred             EcCCCcC
Confidence            9988543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.61  E-value=0.19  Score=45.05  Aligned_cols=73  Identities=18%  Similarity=0.127  Sum_probs=50.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+.+|+|+|+. -+|...++.+...|.+|++++| +.++.+....+..       -+++...  +++..++.-+..|+||
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~-~~~K~e~a~~lGA-------d~~i~~~--~~~~~~~~~~~~d~ii  234 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITR-SEEKLELAKKLGA-------DHVINSS--DSDALEAVKEIADAII  234 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeC-ChHHHHHHHHhCC-------cEEEEcC--CchhhHHhHhhCcEEE
Confidence            35799999966 8999999888889999999999 7654333333322       2233322  5555555544589999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      .+++
T Consensus       235 ~tv~  238 (339)
T COG1064         235 DTVG  238 (339)
T ss_pred             ECCC
Confidence            9988

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.61  E-value=0.24  Score=46.73  Aligned_cols=79  Identities=23%  Similarity=0.251  Sum_probs=53.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |+. .+++|+|+|+ |-.|.++++.|.++|++|++.++ +... .....++..   ..++.+..+...+     ..+.++
T Consensus         1 ~~~-~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~-~~~~-~~~~~l~~~---~~gi~~~~g~~~~-----~~~~~~   68 (445)
T PRK04308          1 MTF-QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDA-ELKP-ERVAQIGKM---FDGLVFYTGRLKD-----ALDNGF   68 (445)
T ss_pred             CCC-CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CCCc-hhHHHHhhc---cCCcEEEeCCCCH-----HHHhCC
Confidence            553 4679999996 57999999999999999999877 5433 112223221   1256666655321     133578


Q ss_pred             CEEEEeccCCc
Q 019415           81 DFVFHVATPLQ   91 (341)
Q Consensus        81 d~Vi~~a~~~~   91 (341)
                      |.||...|+..
T Consensus        69 d~vv~spgi~~   79 (445)
T PRK04308         69 DILALSPGISE   79 (445)
T ss_pred             CEEEECCCCCC
Confidence            99999988764

>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.60  E-value=0.16  Score=48.16  Aligned_cols=77  Identities=17%  Similarity=0.088  Sum_probs=53.4

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh--hhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK--VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ||+|+| .|-.|...++.|.+.|++|++.++ +.....+  ...+..     .++.+..+.-.+.+.+...+.++|.||.
T Consensus         2 ~v~viG-~G~sG~s~a~~l~~~G~~V~~~D~-~~~~~~~~~~~~l~~-----~gi~~~~g~~~~~~~~~~~~~~~d~vv~   74 (459)
T PRK02705          2 IAHVIG-LGRSGIAAARLLKAQGWEVVVSDR-NDSPELLERQQELEQ-----EGITVKLGKPLELESFQPWLDQPDLVVV   74 (459)
T ss_pred             eEEEEc-cCHHHHHHHHHHHHCCCEEEEECC-CCchhhHHHHHHHHH-----cCCEEEECCccchhhhhHHhhcCCEEEE
Confidence            689999 777999999999999999999987 5432111  122333     1566666554444555566778899999


Q ss_pred             eccCCc
Q 019415           86 VATPLQ   91 (341)
Q Consensus        86 ~a~~~~   91 (341)
                      ..|...
T Consensus        75 s~gi~~   80 (459)
T PRK02705         75 SPGIPW   80 (459)
T ss_pred             CCCCCC
Confidence            777643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	341
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		2e-42
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		3e-40
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		3e-39
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		2e-06
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		2e-06

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 174/352 (49%), Gaps = 52/352 (14%)
Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           +VCVTGG GF+GSW+IK LL+ GY V+TT+R + E K  V  L +LPGA  +L FF A++
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADL 62
Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            +PD+F  AI+GC  +FH A+P+        + V +  V  A  I   CV S TVKR IY
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIY 122
Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
           T+S    S   +D     KD +DE+ ++  D  L     +   Y  SK  +EK +L +G 
Sbjct: 123 TSSGSAVSFNGKD-----KDVLDESDWSDVDL-LRSVKPFGWNYAVSKTLAEKAVLEFG- 175
Query: 188 SXXXXXXXXXXXXXXDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEE-----ILGK- 241
                                    + V+  +       +V   L D+ E     +LGK 
Sbjct: 176 ---------------------EQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKK 214
Query: 242 -------LPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQ 294
                    +VH+DDV  AHI+ +E     GR+ C+   V   E++  L   YPE+ I  
Sbjct: 215 EQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQI-- 272
Query: 295 EYLDVPK-REIK------WGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
             L V + +EIK          KL + GF++ Y ++ + DD+I+C ++ GYL
Sbjct: 273 --LTVDELKEIKGARLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 168/336 (50%), Gaps = 21/336 (6%)
Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           VCVTG  GF+GSWL+ +LL++GY V  T+R +  +  KV  L  LP AET L  ++A++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVR-DPTNVKKVKHLLDLPKAETHLTLWKADLA 66
Query: 69  DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT 128
           D  +F+ AI+GC  VFHVATP+          V++  +     I   C  + TV+RL++T
Sbjct: 67  DEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFT 126
Query: 129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLR--VYIESKMKSEKELLSYG 186
           +S    + ++E     Y    DE+C++  +    C  + +   +Y  SK  +E+    Y 
Sbjct: 127 SSAGTVN-IQEHQLPVY----DESCWSDMEF---CRAKKMTAWMYFVSKTLAEQAAWKYA 178
Query: 187 SSXXXXXXXXXXXXXXDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
                              +  SS P S+I  L  +T NE  Y  +R  +        VH
Sbjct: 179 KENNIDFITIIPTLVVGPFI-MSSMPPSLITALSPITGNEAHYSIIRQGQ-------FVH 230
Query: 247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY--LDVPKREI 304
           +DD+C AHI+  E P   GR+ C++      ++A  L++ YPE++I  E+  +D   + +
Sbjct: 231 LDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSV 290
Query: 305 KWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
            +   KL + GFE+ Y L+ +   ++   R  G LP
Sbjct: 291 CFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLP 326

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  158 bits (400), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 166/331 (50%), Gaps = 8/331 (2%)
Query: 10  CVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD 69
           CV GG GFV S L+K LL KGY V+TT+R + +++ KV  L  L      L  F A++ D
Sbjct: 13  CVVGGTGFVASLLVKLLLQKGYAVNTTVR-DPDNQKKVSHLLELQEL-GDLKIFRADLTD 70
Query: 70  PDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA 129
             +FE  I GCDFVFHVATP+         ++++  +     +   C ++ +VKR+I T+
Sbjct: 71  ELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTS 130
Query: 130 SVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSX 189
           S    +  + DG+      +DE  +T  +  LT        Y  SK  +EK    +    
Sbjct: 131 SAAAVTINQLDGTGLV---VDEKNWTDIEF-LTSAKPPTWGYPASKTLAEKAAWKFAEEN 186
Query: 190 XXXXXXXXXXXXXDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDD 249
                         ++L  S  P S+   +  +T NE++   ++  + + G + + H++D
Sbjct: 187 NIDLITVIPTLMAGSSL-TSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVED 245
Query: 250 VCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV-PKREIKWGG 308
           VC AHIF  EK S SGR+ C     S  E+A  L + YP++ +  ++ D  PK ++    
Sbjct: 246 VCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLIISS 305
Query: 309 TKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
            KL ++GF + Y ++ I D+S++  +  G L
Sbjct: 306 EKLVKEGFSFKYGIEEIYDESVEYFKAKGLL 336

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           V VTG  GFV S ++++LL+ GY V  T R      SK+  L+    A+    F  A + 
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTAR----SASKLANLQKRWDAKYPGRFETAVVE 69
Query: 69  D---PDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRL 125
           D      ++  I+G   V H+A+ +   +   Y  VV   +G           + +VKR 
Sbjct: 70  DMLKQGAYDEVIKGAAGVAHIASVVSFSNK--YDEVVTPAIGGTLNALRAAAATPSVKRF 127
Query: 126 IYTASVLCASPLKEDGSAGYKD-------SIDETCYTPPDHPLTCHNEYLRVYIESKMKS 178
           + T+S + A   K +    Y D       SID+    P   P     + L VY  SK ++
Sbjct: 128 VLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP----QKSLWVYAASKTEA 183
Query: 179 E 179
           E
Sbjct: 184 E 184

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           V VTG  GFV S ++++LL+ GY V  T R      SK+  L+    A+    F  A + 
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTAR----SASKLANLQKRWDAKYPGRFETAVVE 69
Query: 69  D---PDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRL 125
           D      ++  I+G   V H+A+ +   +   Y  VV   +G           + +VKR 
Sbjct: 70  DXLKQGAYDEVIKGAAGVAHIASVVSFSNK--YDEVVTPAIGGTLNALRAAAATPSVKRF 127
Query: 126 IYTASVLCASPLKEDGSAGYKD-------SIDETCYTPPDHPLTCHNEYLRVYIESKMKS 178
           + T+S + A   K +    Y D       SID+    P   P     + L VY  SK ++
Sbjct: 128 VLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP----QKSLWVYAASKTEA 183
Query: 179 E 179
           E
Sbjct: 184 E 184

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	341
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-104
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-102
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-100
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-59
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	6e-46
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	6e-37
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	3e-20
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	2e-18
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-18
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-18
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	9e-18
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	3e-17
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-16
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	1e-16
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	5e-16
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	1e-15
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	1e-15
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	2e-14
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	3e-14
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	7e-14
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-13
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	2e-13
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	3e-13
1xq6_A	253	Unknown protein; structural genomics, protein stru	5e-13
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	7e-13
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	1e-12
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	2e-12
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	2e-12
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	4e-12
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	8e-12
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	7e-11
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	1e-10
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-10
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	2e-10
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	5e-10
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-09
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-09
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-09
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	5e-09
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	6e-09
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	7e-09
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	3e-08
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	4e-08
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	1e-07
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-07
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-07
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	3e-07
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	4e-07
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	1e-06
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	2e-06
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	2e-06
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	3e-06
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	4e-06
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	4e-06
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	1e-05
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	1e-05
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	3e-05
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	1e-04
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	2e-04
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	5e-04
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	7e-04

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  307 bits (789), Expect = e-104
 Identities = 100/335 (29%), Positives = 173/335 (51%), Gaps = 10/335 (2%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
             CV GG GFV S L+K LL KGY V+TT+R + +++ KV  L  L      L  F A++
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVR-DPDNQKKVSHLLELQELG-DLKIFRADL 68

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            D  +FE  I GCDFVFHVATP+         ++++  +     +   C ++ +VKR+I 
Sbjct: 69  TDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVIL 128

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG- 186
           T+S    +  + DG+      +DE  +T  +  LT        Y  SK  +EK    +  
Sbjct: 129 TSSAAAVTINQLDGT---GLVVDEKNWTDIEF-LTSAKPPTWGYPASKTLAEKAAWKFAE 184

Query: 187 SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
            + ++++ +   ++AG +      + + +   +  +T NE++   ++  + + G + + H
Sbjct: 185 ENNIDLITVIPTLMAGSSLTSDVPSSIGLA--MSLITGNEFLINGMKGMQMLSGSVSIAH 242

Query: 247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVP-KREIK 305
           ++DVC AHIF  EK S SGR+ C     S  E+A  L + YP++ +  ++ D P K ++ 
Sbjct: 243 VEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLI 302

Query: 306 WGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
               KL ++GF + Y ++ I D+S++  +  G L 
Sbjct: 303 ISSEKLVKEGFSFKYGIEEIYDESVEYFKAKGLLQ 337

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  303 bits (778), Expect = e-102
 Identities = 114/336 (33%), Positives = 172/336 (51%), Gaps = 20/336 (5%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           +VCVTGG GF+GSW+IK LL+ GY V+TT+R + E K  V  L +LPGA  +L FF A++
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADL 62

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            +PD+F  AI+GC  +FH A+P+        + V +  V  A  I   CV S TVKR IY
Sbjct: 63  SNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIY 122

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG- 186
           T+S    S   +D      D +DE+ ++  D  L     +   Y  SK  +EK +L +G 
Sbjct: 123 TSSGSAVSFNGKDK-----DVLDESDWSDVDL-LRSVKPFGWNYAVSKTLAEKAVLEFGE 176

Query: 187 SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
            +G++VV L L  + G    P     +     L  +   +              +  +VH
Sbjct: 177 QNGIDVVTLILPFIVGRFVCPKLPDSIEKA--LVLVLGKKEQIGVT--------RFHMVH 226

Query: 247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHI--KQEYLDVP-KRE 303
           +DDV  AHI+ +E     GR+ C+   V   E++  L   YPE+ I    E  ++   R 
Sbjct: 227 VDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARL 286

Query: 304 IKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL 339
                 KL + GF++ Y ++ + DD+I+C ++ GYL
Sbjct: 287 PDLNTKKLVDAGFDFKYTIEDMFDDAIQCCKEKGYL 322

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  297 bits (762), Expect = e-100
 Identities = 100/343 (29%), Positives = 168/343 (48%), Gaps = 20/343 (5%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRL 60
           M  +S   VCVTG  GF+GSWL+ +LL++GY V  T+R +  +  KV  L  LP AET L
Sbjct: 1   MGSQSE-TVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPTNVKKVKHLLDLPKAETHL 58

Query: 61  IFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG 120
             ++A++ D  +F+ AI+GC  VFHVATP+          V++  +     I   C  + 
Sbjct: 59  TLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAK 118

Query: 121 TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEK 180
           TV+RL++T+S    +  +           DE+C++  +           +Y  SK  +E+
Sbjct: 119 TVRRLVFTSSAGTVNIQEHQLPV-----YDESCWSDMEF-CRAKKMTAWMYFVSKTLAEQ 172

Query: 181 ELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEIL 239
               Y   + ++ + +   +V G   +      +     L  +T NE  Y        I+
Sbjct: 173 AAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITA--LSPITGNEAHY-------SII 223

Query: 240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV 299
            +   VH+DD+C AHI+  E P   GR+ C++      ++A  L++ YPE++I  E+  V
Sbjct: 224 RQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGV 283

Query: 300 PK--REIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLP 340
            +  + + +   KL + GFE+ Y L+ +   ++   R  G LP
Sbjct: 284 DENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLLP 326

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  193 bits (493), Expect = 2e-59
 Identities = 61/344 (17%), Positives = 114/344 (33%), Gaps = 38/344 (11%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            V VTG  GFV S ++++LL+ GY V  T R +    + +                  ++
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDM 71

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
                ++  I+G   V H+A+ +   +   Y  VV   +G           + +VKR + 
Sbjct: 72  LKQGAYDEVIKGAAGVAHIASVVSFSNK--YDEVVTPAIGGTLNALRAAAATPSVKRFVL 129

Query: 128 T---ASVLCASPLKEDGSAGYKDSIDETCYTPPD------HPLTCHNEYLRVYIESKMKS 178
           T    S L   P  E         +DE  +           P +   + L VY  SK ++
Sbjct: 130 TSSTVSALIPKPNVEGI------YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEA 183

Query: 179 EKELLSYG---SSGLEVVALALGVVAG---DTNLPYSSTPVSVIGGLCQLTNNEYVYQTL 232
           E     +         + A+      G   D      ST    +  L     +  +    
Sbjct: 184 ELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGST-SGWMMSLFNGEVSPALA--- 239

Query: 233 RDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVFVSSAEIASCLQQNYPEFH 291
                ++     V   D+   H+ C+  P +   R + T        + +  ++ YP   
Sbjct: 240 -----LMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKT 294

Query: 292 IKQEYLDVPKREIKWGGT----KLEEKGFEYNYDLKMILDDSIK 331
              ++ D  +   K+        L+  G      ++  + D + 
Sbjct: 295 FPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  158 bits (402), Expect = 6e-46
 Identities = 47/282 (16%), Positives = 89/282 (31%), Gaps = 53/282 (18%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K  V G  G +G    + +   G+ +    RP+    S++  L  L   E       AE+
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS----SQIQRLAYL-EPE----CRVAEM 65

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            D    E A++G D V   A          ++  V + +G      + C+++  V R++Y
Sbjct: 66  LDHAGLERALRGLDGVIFSAGYY-PSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILY 123

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
             S   A P    G         E  +                Y+  K   +++      
Sbjct: 124 VGSA-YAMPRHPQGLP-----GHEGLFYDSLPSGKSS------YVLCKWALDEQAREQAR 171

Query: 188 SGLEVVALALGVVAGDTNLPYSSTPVSVIG-GLCQLTNNEYVYQTLRDTEEILGKLP--- 243
           +GL VV                  P  V+G      T    +           G++    
Sbjct: 172 NGLPVVIG---------------IPGMVLGELDIGPTTGRVITAIGN------GEMTHYV 210

Query: 244 -----LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIA 280
                ++   +     +  +E+  +  R+  T   +  A++ 
Sbjct: 211 AGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLT 252

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  131 bits (332), Expect = 6e-37
 Identities = 43/265 (16%), Positives = 81/265 (30%), Gaps = 57/265 (21%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ + G  GFVGS L+ + L++G+ V   +R       K      +      L   +A++
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTAVVR----HPEK------IKIENEHLKVKKADV 55

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
              D      +G D V     P     G+   ++ +  +     I     K+G V R + 
Sbjct: 56  SSLDEVCEVCKGADAVISAFNP-----GWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLM 109

Query: 128 T--ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSY 185
              A  L  +P            + ++   P +           +    K   E  L   
Sbjct: 110 VGGAGSLFIAP---------GLRLMDSGEVPEN-----------ILPGVKALGEFYLNFL 149

Query: 186 GS-SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL 244
                ++ V  +                  V  G  +L  ++ +          +     
Sbjct: 150 MKEKEIDWVFFSPAADMRP----------GVRTGRYRLGKDDMIV--------DIVGNSH 191

Query: 245 VHIDDVCEAHIFCMEKPSMSGRFFC 269
           + ++D   A I  +E P      F 
Sbjct: 192 ISVEDYAAAMIDELEHPKHHQERFT 216

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 89.3 bits (222), Expect = 3e-20
 Identities = 64/337 (18%), Positives = 109/337 (32%), Gaps = 95/337 (28%)

Query: 4   KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVH------TTLRPNLEDKSKVDLLKSLPGAE 57
                  +TG  GF+GS L++ LL     V       T  + NL++   +   K     +
Sbjct: 25  AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 84

Query: 58  TRLIFFEAEIYDPDTFENAIQGCDFVFH----------VATPLQH----IDGYLYKNVVE 103
               F + +I + D   NA  G D+V H          +  P+      IDG+L  N++ 
Sbjct: 85  ----FIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFL--NMLI 138

Query: 104 ACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS----IDETCYTPPDH 159
           A   A             V+   Y AS           S+ Y D       E        
Sbjct: 139 AARDAK------------VQSFTYAAS-----------SSTYGDHPGLPKVE---DTIGK 172

Query: 160 PLTCHNEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAG---DTNLPYSSTPVSV 215
           PL+        Y  +K  +E     +    G   + L    V G   D N  Y+    +V
Sbjct: 173 PLS-------PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYA----AV 221

Query: 216 IGGLC-QLTNNE--YVY----QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMS-GRF 267
           I      +   +  Y+      + RD           +I++  +A++        +  + 
Sbjct: 222 IPKWTSSMIQGDDVYINGDGETS-RD---------FCYIENTVQANLLAATAGLDARNQV 271

Query: 268 F--CTNVFVSSAEIASCLQQ----NYPEFHIKQEYLD 298
           +        S  ++   L+     N   +H +  Y D
Sbjct: 272 YNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRD 308

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 84.7 bits (210), Expect = 2e-18
 Identities = 52/296 (17%), Positives = 87/296 (29%), Gaps = 68/296 (22%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY---IV----HTTLRPNLEDKSKVDLLKSL 53
               +N  V V GG GFVGS L+K+LL+ G     V     +  + N+ D   V      
Sbjct: 27  ASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVR----- 81

Query: 54  PGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYK--NVVEACVGAAKK 111
                   F E  I D     +     D+VFH+AT        ++      E       K
Sbjct: 82  --------FSETSITDDALLASLQDEYDYVFHLATY-HGNQSSIHDPLADHENNTLTTLK 132

Query: 112 IASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVY 171
           +         +K+++Y+A+                +   +      +  +   +     Y
Sbjct: 133 LYERLKHFKRLKKVVYSAA-----------GCSIAEKTFDDAKATEETDIVSLHNNDSPY 181

Query: 172 IESKMKSEKELLSYGSS-GLEVVAL------------ALGVVAGDTNLPYSSTPVSVIGG 218
             SK+  E   + Y     L  V                G   G     +     +V   
Sbjct: 182 SMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWR----NVTPT 237

Query: 219 LC-QLTNNE--YVY----QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRF 267
              +        +      T RD          + ++DV    I C    +  G +
Sbjct: 238 FIYKALKGMPLPLENGGVAT-RD---------FIFVEDVANGLIACAADGTPGGVY 283

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 83.4 bits (207), Expect = 2e-18
 Identities = 48/352 (13%), Positives = 104/352 (29%), Gaps = 108/352 (30%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ VTGG GF+G ++++ + + G                +        A     +  ++ 
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPII-----------LTRSIGNK-AINDYEYRVSDY 51

Query: 68  YDPDTFENAIQGCDFVFH------VATPLQH----IDGYLYKNVVEACVGAAKKIASFCV 117
              D     +   D V H          +             N+ +A           C 
Sbjct: 52  TLEDLIN-QLNDVDAVVHLAATRGSQGKISEFHDNEILTQ--NLYDA-----------CY 97

Query: 118 KSGTVKRLIYTASVLCASPLKEDGSAGY----KDSIDETCYTPPDHPLTCHNEYLRVYIE 173
           ++  +  ++Y ++            + Y        +E        P         +Y  
Sbjct: 98  ENN-ISNIVYAST-----------ISAYSDETSLPWNEKE---LPLPDL-------MYGV 135

Query: 174 SKMKSEKELLSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLC-QLTNNE--YVY 229
           SK+  E     Y    GL +  L    + G            +I     Q  + E   ++
Sbjct: 136 SKLACEHIGNIYSRKKGLCIKNLRFAHLYG----FNEK-NNYMINRFFRQAFHGEQLTLH 190

Query: 230 ----QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRF-FCTNVFVSSAEIASCLQ 284
                  R+          ++  D  ++ I+ +++  +SG F   +   +++ E+A+ + 
Sbjct: 191 ANSVAK-RE---------FLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTIN 240

Query: 285 QNY-----PEF-------HIKQEYLDVPKREIKWGGTKLEEK-GFEYNYDLK 323
             +                I   Y+D          +K +E   F  +Y+  
Sbjct: 241 NAFGNKDNLLVKNPNANEGIHSSYMDS---------SKAKELLDFSTDYNFA 283

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 83.5 bits (207), Expect = 2e-18
 Identities = 63/356 (17%), Positives = 120/356 (33%), Gaps = 87/356 (24%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           + VTG  G +G+ L+  L +K    +             D+++        + F   ++ 
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIA---------SDIVQ---RDTGGIKFITLDVS 49

Query: 69  DPDTFENAIQ--GCDFVFH---------VATPLQH----IDGYLYKNVVEACVGAAKKIA 113
           + D  + A++    D +FH            P       ++G    N++EA         
Sbjct: 50  NRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTY--NILEAA-------- 99

Query: 114 SFCVKSGTVKRLIY--TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVY 171
               K   V++++   T  V         G    K+ +          P T       ++
Sbjct: 100 ----KQHRVEKVVIPSTIGVF--------GPETPKNKVPSIT---ITRPRT-------MF 137

Query: 172 IESKMKSEKELLSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE---- 226
             +K+ +E     Y    GL+V +L    +      P + T    +         E    
Sbjct: 138 GVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKC 197

Query: 227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFC----TNVFVSSAEIASC 282
           Y+             LP++++ D  +A +   E              T    + +E+ S 
Sbjct: 198 YLAPNRA--------LPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSK 249

Query: 283 LQQNYPEFHIKQEYLDVPKREIK--WGG----TKLEEK-GFEYNYDLKMILDDSIK 331
           +++  PEF I  EY +  + +I   W      ++   + GF   YDL   +DD I 
Sbjct: 250 IKERIPEFEI--EYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMID 303

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 80.8 bits (200), Expect = 9e-18
 Identities = 38/211 (18%), Positives = 61/211 (28%), Gaps = 63/211 (29%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           ++ VTG  G VGS +   L    + V              D++  L  AE        ++
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRL-----------SDIV-DLGAAEAHEEIVACDL 51

Query: 68  YDPDTFENAIQGCDFVFHVA---------TPLQH-IDGYLYKNVVEACVGAAKKIASFCV 117
            D     + ++ CD + H+            LQ  I G    N+ EA             
Sbjct: 52  ADAQAVHDLVKDCDGIIHLGGVSVERPWNDILQANIIGAY--NLYEA-----------AR 98

Query: 118 KSGTVKRLIYTASVLCASPLKEDGSAGYKDS-----IDETCYTPPDHPLTCHNEYLRVYI 172
             G   R+++ +S           +           ID      PD            Y 
Sbjct: 99  NLG-KPRIVFASS-----------NHTIGYYPRTTRIDTEVPRRPDSL----------YG 136

Query: 173 ESKMKSEKELLSYGSS-GLEVVALALGVVAG 202
            SK   E     Y     +E + + +G    
Sbjct: 137 LSKCFGEDLASLYYHKFDIETLNIRIGSCFP 167

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 79.3 bits (196), Expect = 3e-17
 Identities = 35/209 (16%), Positives = 62/209 (29%), Gaps = 57/209 (27%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           ++ VTG  G +G  + ++L     I+             +  L  L  A       + ++
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILR------------LADLSPLDPAGPNEECVQCDL 52

Query: 68  YDPDTFENAIQGCDFVFHVA---------TPLQ-HIDGYLYKNVVEACVGAAKKIASFCV 117
            D +     + GCD + H+            LQ +I G    N+ EA             
Sbjct: 53  ADANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLY--NLYEA-----------AR 99

Query: 118 KSGTVKRLIY--TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESK 175
             G   R+++  +   +        G     + +       PD            Y  SK
Sbjct: 100 AHG-QPRIVFASSNHTI--------GYYPQTERLGPDVPARPDGL----------YGVSK 140

Query: 176 MKSEKELLSYG-SSGLEVVALALGVVAGD 203
              E     Y    G E   + +G    +
Sbjct: 141 CFGENLARMYFDKFGQETALVRIGSCTPE 169

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 78.8 bits (195), Expect = 1e-16
 Identities = 63/293 (21%), Positives = 100/293 (34%), Gaps = 86/293 (29%)

Query: 4   KSNFKVCVTGGEGFVGSWLIKKLLDKGYIV------HTTLRPNLEDKSKVDLLKSLPGAE 57
            S     +TG  GF+GS L++KLL    +V       T  + NL++   +   +      
Sbjct: 23  FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFC 82

Query: 58  TRLIFFEAEIYDPDTFENAIQGCDFVFHVA----------TPLQH----IDGYLYKNVVE 103
               F E +I D  T E  ++G D V H A           P+      I G+L  N++ 
Sbjct: 83  ----FIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFL--NILH 136

Query: 104 ACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS----IDETCYTPPDH 159
           A             K+  V+   Y AS           S+ Y D       E       +
Sbjct: 137 AA------------KNAQVQSFTYAAS-----------SSTYGDHPALPKVE---ENIGN 170

Query: 160 PLTCHNEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVV---AGDTNLPYSSTPVSV 215
           PL+        Y  +K  +E     Y  + G + + L    V     D N  Y+    +V
Sbjct: 171 PLS-------PYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYA----AV 219

Query: 216 IGGLC-QLTNNE--YVY---QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS 262
           I      +   +  Y+    +T RD           +ID+V + +I       
Sbjct: 220 IPKWTAAMLKGDDVYINGDGETSRD---------FCYIDNVIQMNILSALAKD 263

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 78.3 bits (194), Expect = 1e-16
 Identities = 48/291 (16%), Positives = 97/291 (33%), Gaps = 97/291 (33%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIV-----HTTLRPNLEDKSKVDLLKSLPGAETRLIF 62
            + VTGG GF+GS ++ KL +   IV      +     + + ++                
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAAR---------------L 47

Query: 63  FEAEIYDPDTFENAIQGCDFVFH----------VATPLQH----IDGYLYKNVVEACVGA 108
            +A++   D  ++ ++G + V+H             P +     +       ++EA    
Sbjct: 48  VKADLAADD-IKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATY--RLLEA---- 100

Query: 109 AKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS----IDETCYTPPDHPLTCH 164
                    K+G V R+++T++           S  Y ++      E      D+P    
Sbjct: 101 -------MRKAG-VSRIVFTST-----------STVYGEAKVIPTPE------DYPTHPI 135

Query: 165 NEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT 223
           +    +Y  SK+  E  + SY  +  ++        V G       ST   +   + +L 
Sbjct: 136 S----LYGASKLACEALIESYCHTFDMQAWIYRFANVIGR-----RSTHGVIYDFIMKLK 186

Query: 224 NNE---YVY----QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRF 267
            N     +     Q  +           ++I D  +A +F +        F
Sbjct: 187 RNPEELEILGNGEQN-KS---------YIYISDCVDAMLFGLRGDERVNIF 227

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 76.9 bits (190), Expect = 5e-16
 Identities = 59/325 (18%), Positives = 104/325 (32%), Gaps = 74/325 (22%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAE 57
                   + VTGG GF+GS ++K L DKG    +V       +++        +L    
Sbjct: 41  GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILV-------VDNLKDGTKFVNLVDLN 93

Query: 58  TRLIFFEAEIYDPDTFENAIQGCDFVFHVA----TPLQHIDGYLYKNVVEACVGAAKKIA 113
                 + +              + +FH      T  +    Y+  N        +K++ 
Sbjct: 94  IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTT-EWDGKYMMDN----NYQYSKELL 148

Query: 114 SFCVKSGTVKRLIYTASVLCASPLKEDGSAGY----KDSIDETCYTPPDHPLTCHNEYLR 169
            +C++       +Y +S           +A Y     D I+       + PL        
Sbjct: 149 HYCLERE--IPFLYASS-----------AATYGGRTSDFIESRE---YEKPLN------- 185

Query: 170 VYIESKMKSEKELLSYGSS-GLEVVALALGVVAG---DTNLPYSSTPVSVIGGLC-QLTN 224
           V+  SK   ++ +         ++V      V G         +    SV   L  QL N
Sbjct: 186 VFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMA----SVAFHLNTQLNN 241

Query: 225 NEYVY------QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFC-TNVFVSSA 277
            E            RD          V++ DV + +++ +E    SG F   T    S  
Sbjct: 242 GESPKLFEGSENFKRD---------FVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQ 291

Query: 278 EIASCLQQNYPEFHIKQEYLDVPKR 302
            +A      + +  I  EY+  P +
Sbjct: 292 AVADATLAYHKKGQI--EYIPFPDK 314

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 61/317 (19%), Positives = 104/317 (32%), Gaps = 74/317 (23%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEA 65
           + VTGG GF+GS ++K L DKG    +V       +++        +L          + 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILV-------VDNLKDGTKFVNLVDLNIADYMDKE 54

Query: 66  EIYDPDTFENAIQGCDFVFHVA----TPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGT 121
           +              + +FH      T  +    Y+  N        +K++  +C++   
Sbjct: 55  DFLIQIMAGEEFGDVEAIFHEGACSSTT-EWDGKYMMDN----NYQYSKELLHYCLEREI 109

Query: 122 VKRLIYTASVLCASPLKEDGSAGY----KDSIDETCYTPPDHPLTCHNEYLRVYIESKMK 177
               +Y +S           +A Y     D I+   Y  P          L VY  SK  
Sbjct: 110 --PFLYASS-----------AATYGGRTSDFIESREYEKP----------LNVYGYSKFL 146

Query: 178 SEKELLSYGSS-GLEVVALALGVVAG---DTNLPYSSTPVSVIGGLC-QLTNNEYVY--- 229
            ++ +         ++V      V G         +    SV   L  QL N E      
Sbjct: 147 FDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMA----SVAFHLNTQLNNGESPKLFE 202

Query: 230 ---QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFC-TNVFVSSAEIASCLQQ 285
                 RD          V++ DV + +++ +E    SG F   T    S   +A     
Sbjct: 203 GSENFKRD---------FVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLA 252

Query: 286 NYPEFHIKQEYLDVPKR 302
            + +  I  EY+  P +
Sbjct: 253 YHKKGQI--EYIPFPDK 267

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 75.4 bits (186), Expect = 1e-15
 Identities = 55/279 (19%), Positives = 88/279 (31%), Gaps = 88/279 (31%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVH------TTLRPNLEDKSKVDLLKSLPGAETRLI 61
           KV +TG  G +GS + + LL++G  V       T  R +L+D   +              
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLT------------- 69

Query: 62  FFEAEIYDPDTFENAIQGC--DFVFHVATPLQHIDGYLYK---------NVVEACVGAAK 110
           F E  I D       I     D V H A   +  D +            NVV+A      
Sbjct: 70  FVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQA------ 123

Query: 111 KIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS-----IDETCYTPPDHPLTCHN 165
                  K+  V R +Y  +           +  Y        +      P +   +   
Sbjct: 124 -----AKKNN-VGRFVYFQT-----------ALCYGVKPIQQPVRLD--HPRNPANS--- 161

Query: 166 EYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ-LTN 224
                Y  SK  +E  L      GL+ V   L  V G    P + +    +    Q L+ 
Sbjct: 162 ----SYAISKSANEDYLEYS---GLDFVTFRLANVVG----PRNVS--GPLPIFFQRLSE 208

Query: 225 NE--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP 261
            +  +V +  RD          V + D+  A +  ++  
Sbjct: 209 GKKCFVTKARRD---------FVFVKDLARATVRAVDGV 238

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 32/196 (16%), Positives = 66/196 (33%), Gaps = 41/196 (20%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ + G  G VG  L+K L    Y ++   R       +V         +      +   
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR----KVEQV---PQYNNVKAVHFDVDW-- 52

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
             P+     + G D + +V+       G   K++++  +  A K+     K+  VKR I 
Sbjct: 53  -TPEEMAKQLHGMDAIINVS-------GSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFIL 103

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
             S + +                      P+  +    + L+ Y  +K  ++  L     
Sbjct: 104 L-STIFS--------------------LQPEKWIGAGFDALKDYYIAKHFADLYLTK--E 140

Query: 188 SGLEVVALALGVVAGD 203
           + L+   +  G +  +
Sbjct: 141 TNLDYTIIQPGALTEE 156

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 71.4 bits (176), Expect = 3e-14
 Identities = 49/295 (16%), Positives = 85/295 (28%), Gaps = 109/295 (36%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVH------TTLRPNLEDKSKVDLLKSLPGAETRLI 61
           ++ VTGG GF+GS L+ KL++ GY V       +  R  +   ++               
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAE--------------- 46

Query: 62  FFEAEIYDPDTFENAIQGCDFVFH----------VATPLQH----IDGYLYKNVVEACVG 107
               ++ D           D VFH             P+ H    +      NV+E    
Sbjct: 47  LHVRDLKDYSWGAGI--KGDVVFHFAANPEVRLSTTEPIVHFNENVVATF--NVLEW--- 99

Query: 108 AAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS----IDETCYTPPDHPLTC 163
                     ++G V+ +++ +S           S  Y D+      E      + P   
Sbjct: 100 --------ARQTG-VRTVVFASS-----------STVYGDADVIPTPE------EEPYKP 133

Query: 164 HNEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL 222
            +    VY  +K   E    +Y    G+  +A+    V G    P     V         
Sbjct: 134 IS----VYGAAKAAGEVMCATYARLFGVRCLAVRYANVVG----PRLRHGVIYD------ 179

Query: 223 TNNEYVYQTLRDTEEILGKLPL------------VHIDDVCEAHIFCMEKPSMSG 265
                        +       L            +++ D  EA +   +K     
Sbjct: 180 ----------FIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMD 224

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 68.5 bits (168), Expect = 7e-14
 Identities = 38/243 (15%), Positives = 67/243 (27%), Gaps = 66/243 (27%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ + G  G  G   + + +  GY V   +R    D S++        A         ++
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR----DSSRLPSEGP-RPAHV----VVGDV 55

Query: 68  YDPDTFENAIQGCDFVFHVATPL-----QHIDGYLYKNVVEACVGAAKKIASFCVKSGTV 122
                 +  + G D V  +           +     +N+V A                 V
Sbjct: 56  LQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG------------V 103

Query: 123 KRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKEL 182
            +++               SA          + P   P       L+   +  ++  K L
Sbjct: 104 DKVVAC------------TSAF-------LLWDPTKVP-----PRLQAVTDDHIRMHKVL 139

Query: 183 LSYGSSGLEVVALALG-----------VVAGDTNLPYSSTPVSVIGGLC--QLTNNEYVY 229
                SGL+ VA+               V  D   P        +G      LT +EY  
Sbjct: 140 R---ESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDG 196

Query: 230 QTL 232
            + 
Sbjct: 197 HST 199

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 65/261 (24%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           +V V G  G V  +L+ +L +KG+     +R    ++ +   L+    ++  +       
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVR----NEEQGPELRERGASDIVVAN----- 73

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
              + F +A    D V   A    H        +    +  A K      K G +KR I 
Sbjct: 74  -LEEDFSHAFASIDAVVFAAGSGPHTGADKTILI---DLWGAIKTIQEAEKRG-IKRFIM 128

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
             S +                       P   P+      +R Y+ +K  ++ EL     
Sbjct: 129 V-SSVGTVD-------------------PDQGPMN-----MRHYLVAKRLADDELK---R 160

Query: 188 SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHI 247
           S L+   +  G ++ +     S+  V+V     ++T +                   +  
Sbjct: 161 SSLDYTIVRPGPLSNE----ESTGKVTVSPHFSEITRS-------------------ITR 197

Query: 248 DDVCEAHIFCMEKPSMSGRFF 268
            DV +     +++    G+ F
Sbjct: 198 HDVAKVIAELVDQQHTIGKTF 218

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 69.1 bits (170), Expect = 2e-13
 Identities = 45/296 (15%), Positives = 85/296 (28%), Gaps = 109/296 (36%)

Query: 3   HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIV------HTTLRPNLEDKSKVDLLKSLPGA 56
           +    ++ +TGG GF+G  L + L+  G  V              E   K          
Sbjct: 4   NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------- 53

Query: 57  ETRLIFFEAEIYDPDTFENAIQGCDFVFHVA----------TPLQHID---GYLYKNVVE 103
                F E  + + +  E  +     V+H+A           PL ++D        +++ 
Sbjct: 54  -----FLEKPVLELE--ERDLSDVRLVYHLASHKSVPRSFKQPLDYLDNVDSGR--HLLA 104

Query: 104 ACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS----IDETCYTPPDH 159
                       C   G V +++  ++              Y  +      E     P  
Sbjct: 105 L-----------CTSVG-VPKVVVGST-----------CEVYGQADTLPTPEDS---PLS 138

Query: 160 PLTCHNEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAGDTNLPYSST------P 212
           P +        Y  SK+  E    ++  +     V +          + + +       P
Sbjct: 139 PRSP-------YAASKVGLEMVAGAHQRASVAPEVGI----------VRFFNVYGPGERP 181

Query: 213 VSVIGGLC-QLTNNE--YVY----QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP 261
            +++  LC  L       V     Q  RD           +I DV +  +    +P
Sbjct: 182 DALVPRLCANLLTRNELPVEGDGEQR-RD---------FTYITDVVDKLVALANRP 227

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 68.5 bits (168), Expect = 3e-13
 Identities = 60/359 (16%), Positives = 128/359 (35%), Gaps = 84/359 (23%)

Query: 6   NFKVCVTGGEGFVGSWLIKKLLDK-GY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIF 62
           N K+ + G  G +G+ L +KL    G   ++ + +R     K   D++ S P       F
Sbjct: 2   NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIR-----KLNTDVVNSGP-------F 49

Query: 63  FEAEIYDPDTFENAIQ--GCDFVFHVA---------TPLQHID----GYLYKNVVEACVG 107
                 D +  E+ ++      ++ +A          P    D         +V+     
Sbjct: 50  EVVNALDFNQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLF--HVLNLA-- 105

Query: 108 AAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSA-GYKDSIDETCYTPPDHPLTCHNE 166
                     K+  +K++ + +S           +  G     + T       P T    
Sbjct: 106 ----------KAKKIKKIFWPSS----------IAVFGPTTPKENTPQYTIMEPST---- 141

Query: 167 YLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN 225
              VY  SK   E+    Y +  G++V ++    +   +  P   T    +    +   +
Sbjct: 142 ---VYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIAD 198

Query: 226 E----YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN----VFVSSA 277
           +    ++    +        +P++++DD  +A I  M+ P    +   +     +  +  
Sbjct: 199 KKYECFLSSETK--------MPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPT 250

Query: 278 EIASCLQQNYPEFHIKQEYLDVPKREIKWGG----TKLEEK-GFEYNYDLKMILDDSIK 331
           EIA+ ++++ PEF I  E     K    W      ++  E   +++ +DL+ +  D I+
Sbjct: 251 EIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMTKDMIE 309

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 67.2 bits (164), Expect = 5e-13
 Identities = 34/212 (16%), Positives = 59/212 (27%), Gaps = 53/212 (25%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEA 65
            V VTG  G  G  + KKL +    ++    +R         + +     A+        
Sbjct: 6   TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR----SAQGKEKIG--GEADVF----IG 55

Query: 66  EIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASF---------- 115
           +I D D+   A QG D +  + + +  +                +               
Sbjct: 56  DITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKN 115

Query: 116 ----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVY 171
                  +G VK ++     +                      T PDHPL          
Sbjct: 116 QIDAAKVAG-VKHIVVV-GSMGG--------------------TNPDHPLNKLG--NGNI 151

Query: 172 IESKMKSEKELLSYGSSGLEVVALALGVVAGD 203
           +  K K+E+ L     SG     +  G +   
Sbjct: 152 LVWKRKAEQYLA---DSGTPYTIIRAGGLLDK 180

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 67.2 bits (165), Expect = 7e-13
 Identities = 67/297 (22%), Positives = 103/297 (34%), Gaps = 105/297 (35%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS------LPGAETRLI 61
           +V VTGG GF+GS +++ LL +G  V             +D L +        G      
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAV-----------LDNLATGKRENVPKGVP---- 46

Query: 62  FFEAEIYDPDTFENAIQGCDF--VFH----------VATPLQH----IDGYLYKNVVEAC 105
           FF  ++ D +  E A +      V H          V  P+      + G L  N++EA 
Sbjct: 47  FFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGL--NLLEA- 103

Query: 106 VGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS-----IDETCYTPPDHP 160
                     C + G V++L++ ++          G A Y +       +ET    P  P
Sbjct: 104 ----------CRQYG-VEKLVFAST----------GGAIYGEVPEGERAEETWPPRPKSP 142

Query: 161 LTCHNEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAG---DTNLPYSSTPVSVI 216
                     Y  SK   E  L  YG S GL+ V+L  G V G   D +   +     V+
Sbjct: 143 ----------YAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPH-GEA----GVV 187

Query: 217 GGLCQ-LTNNEYV------YQT----LRDTEEILGKLPLVHIDDVCEAHIFCMEKPS 262
               + +     V             +RD          V++ DV EAH   +    
Sbjct: 188 AIFAERVLKGLPVTLYARKTPGDEGCVRD---------YVYVGDVAEAHALALFSLE 235

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 65.6 bits (160), Expect = 1e-12
 Identities = 37/218 (16%), Positives = 65/218 (29%), Gaps = 55/218 (25%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAE 66
            V + G  G +   +I +L DK         R      +K+        ++        +
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFAR----QPAKIHKPYP-TNSQII----MGD 75

Query: 67  IYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI 126
           + +    + A+QG D V+   T           +V+ A                 VKRLI
Sbjct: 76  VLNHAALKQAMQGQDIVYANLTG--EDLDIQANSVIAAMKACD------------VKRLI 121

Query: 127 YTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG 186
           +              S G  D         P   +  +N  +   ++   ++   +    
Sbjct: 122 FV------------LSLGIYDE-------VPGKFVEWNNAVIGEPLKPFRRAADAIE--- 159

Query: 187 SSGLEVVAL---------ALGVVAGDTNLPYSSTPVSV 215
           +SGLE   L          +       N P+  T VS 
Sbjct: 160 ASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSR 197

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 66.5 bits (163), Expect = 2e-12
 Identities = 63/323 (19%), Positives = 109/323 (33%), Gaps = 75/323 (23%)

Query: 5   SNFKVCVTGGEGFVGSWLIKKLLDKGY----IV-----HTTLRPNLEDKSKVDLLKSLPG 55
            N  + +TGG GFVGS L     +       +V       TL  N    S          
Sbjct: 9   ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--- 65

Query: 56  AETRLIFFEAEIYDPDTFENAI-QGCDFVFHVA----TPLQHIDGYLYKNVVEACVGAAK 110
              +     A+I +P           D++FH A    T +   +  L    ++    A  
Sbjct: 66  IGFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTML--NQELV---MKTNYQAFL 120

Query: 111 KIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS---IDETCYTPPDHPLTCHNEY 167
            +           ++IY +S           +  Y ++            + P       
Sbjct: 121 NLLEIARSKK--AKVIYASS-----------AGVYGNTKAPNVVGK---NESPEN----- 159

Query: 168 LRVYIESKMKSEKELLSYGSSGLEVVALALGVVAG---DTNLPYSSTPVSVIGGLC-QLT 223
             VY  SK+  ++ +LS+ S+    V L    V G         +    S++  L     
Sbjct: 160 --VYGFSKLCMDEFVLSH-SNDNVQVGLRYFNVYGPREFYKEKTA----SMVLQLALGAM 212

Query: 224 NNEYVY-----QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFC-TNVFVSSA 277
             + V      + LRD          V+I+DV +A++  M+    SG +    +   S  
Sbjct: 213 AFKEVKLFEFGEQLRD---------FVYIEDVIQANVKAMKAQK-SGVYNVGYSQARSYN 262

Query: 278 EIASCLQQNYPEFHIKQEYLDVP 300
           EI S L+++  +F +   Y+  P
Sbjct: 263 EIVSILKEHLGDFKV--TYIKNP 283

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 66.0 bits (161), Expect = 2e-12
 Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 19/141 (13%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           + V G  G  G+ LI+     G+ V   +  +L+     + L+++P        F+  + 
Sbjct: 8   IAVVGATGRQGASLIRVAAAVGHHVRAQVH-SLK-GLIAEELQAIPNVT----LFQGPLL 61

Query: 69  D-PDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
           +     +   +G    F   T     +  + K++ +A   A           GT++  IY
Sbjct: 62  NNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRA-----------GTIQHYIY 110

Query: 128 TASVLCASPLKEDGSAGYKDS 148
           + S+   S      +      
Sbjct: 111 S-SMPDHSLYGPWPAVPMWAP 130

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 65.3 bits (160), Expect = 4e-12
 Identities = 56/295 (18%), Positives = 87/295 (29%), Gaps = 96/295 (32%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRL 60
           +   S+ ++ +TGG G +GS LI+  L +G+ +   +  N     K ++L  + G     
Sbjct: 15  VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEI-LVI-DNFA-TGKREVLPPVAGLS--- 68

Query: 61  IFFEAEIYDPDTFENAIQGCDF--VFH-------VATPLQHIDGYLYKNVV------EAC 105
              E  + D    E A        V H            +        NV       +A 
Sbjct: 69  -VIEGSVTDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAE----DAATNVQGSINVAKA- 122

Query: 106 VGAAKKIASFCVKSGTVKRLIY--TASVLCASPLKEDGSAGYKDS----IDETCYTPPDH 159
                       K+G VKRL+   TA               Y       I        D 
Sbjct: 123 ----------ASKAG-VKRLLNFQTALC-------------YGRPATVPIPI------DS 152

Query: 160 PLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIG-- 217
           P          Y  SK   E  L+      + VV+L L  V G         P   IG  
Sbjct: 153 PTAPFT----SYGISKTAGEAFLMMS---DVPVVSLRLANVTG---------PRLAIGPI 196

Query: 218 --GLCQLTNNEYVY---QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRF 267
                +L   +  +      RD          + + D        +++   +G F
Sbjct: 197 PTFYKRLKAGQKCFCSDTV-RDF---------LDMSDFLAIADLSLQEGRPTGVF 241

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 64.3 bits (157), Expect = 8e-12
 Identities = 50/356 (14%), Positives = 97/356 (27%), Gaps = 69/356 (19%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS--LPGAETRLIFFEA 65
            + + G  G VG  L ++L+  G +        +E  + +D+ +     G    +    A
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGK----PVEKFTLIDVFQPEAPAGFSGAVDARAA 71

Query: 66  EIYDPDTFENAIQ-GCDFVFH---------VATPLQH----IDGYLYKNVVEACVGAAKK 111
           ++  P   E  ++   D +FH              +     +DG     + +A   A   
Sbjct: 72  DLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTR--YLFDAIRIAN-- 127

Query: 112 IASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVY 171
                 K G   R+++T+S+           A +   +      P +   T        Y
Sbjct: 128 -----GKDGYKPRVVFTSSI-----------AVFGAPLPYP--IPDEFHTTPLT----SY 165

Query: 172 IESKMKSEKELLSYGSS-GLEVVALALGVVA---GDTNLPYSSTPVSVIGGLCQLTNNEY 227
              K   E  L  Y      + + + L  +    G  N   S    +++     L   E 
Sbjct: 166 GTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREP--LVGQEA 223

Query: 228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSGRFF-CTNVFVSSAEIASCL 283
           V            +             I             R      +  +  E    L
Sbjct: 224 VLPVPESI-----RHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEAL 278

Query: 284 QQNYPEFHIKQ-EYLDVPKRE-------IKWGGTKLEEKGFEYNYDLKMILDDSIK 331
           ++   E  +                     +   +  E GF      + I+   I+
Sbjct: 279 RKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIE 334

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 61.7 bits (150), Expect = 7e-11
 Identities = 42/197 (21%), Positives = 70/197 (35%), Gaps = 39/197 (19%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           KV + G  GF+G  L K++L+        +  +++     DL+K       R+ FFE +I
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGM--DMQTDRLGDLVKH-----ERMHFFEGDI 78

Query: 68  YDP-DTFENAIQGCDFVFHVATPLQHIDGYLYK--NVVEACVGAAKKIASFCVKSGTVKR 124
               +  E  ++ CD +  +         Y+ +   V E    A   I    VK G  K 
Sbjct: 79  TINKEWVEYHVKKCDVILPLVAIATPAT-YVKQPLRVFELDFEANLPIVRSAVKYG--KH 135

Query: 125 LIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYL-------R-VYIESKM 176
           L++ ++           S  Y    D         P    +          R +Y  SK 
Sbjct: 136 LVFPST-----------SEVYGMCAD-----EQFDPDA--SALTYGPINKPRWIYACSKQ 177

Query: 177 KSEKELLSYGSSGLEVV 193
             ++ +  YG  GL   
Sbjct: 178 LMDRVIWGYGMEGLNFT 194

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 60.9 bits (147), Expect = 1e-10
 Identities = 41/285 (14%), Positives = 79/285 (27%), Gaps = 60/285 (21%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYI-----VHTTLR---PNLEDKSKVDLLKSLPGAETRLIF 62
           + G  G +G+ L + L           V+   R   P   + + ++             +
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPIN-------------Y 52

Query: 63  FEAEIYDPDTFENAIQGCDFVFHVATP----------LQHIDGYLYKNVVEACVGAAKKI 112
            + +I DPD  +  +     V HV                 +  +++NV++A +     +
Sbjct: 53  VQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNL 112

Query: 113 ASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYI 172
               +++G      Y                 Y            D P          Y+
Sbjct: 113 KHISLQTGRK---HYMGPF-----------ESYGKIESHDPPYTEDLPRLK-------YM 151

Query: 173 ESKMKSEKELLSYGS--SGLEVVALALGVVAGDT--NLPYSSTPVSVIGGLCQLTNNEYV 228
                 E  +L       GL       G + G +  ++      + V   +C+       
Sbjct: 152 NFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLR 211

Query: 229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVF 273
           +   +      G       D + E HI+    P      F  NV 
Sbjct: 212 FTGCKAA--WDGYSDCSDADLIAEHHIWAAVDPYAKNEAF--NVS 252

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 60.7 bits (147), Expect = 1e-10
 Identities = 54/343 (15%), Positives = 94/343 (27%), Gaps = 86/343 (25%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            + +TG +GFVG  L   L                                  IF     
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTTDHH---------------------------IFEVHRQ 34

Query: 68  YDPDTFENAIQGCDFVFHVATP--LQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRL 125
              +  E+A+   DF+ H+A     +H   +   N     V     +     ++   K  
Sbjct: 35  TKEEELESALLKADFIVHLAGVNRPEHDKEFSLGN-----VSYLDHVLDILTRNT-KKPA 88

Query: 126 IYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSY 185
           I  +S                        T  D+P          Y ESK++ E+ L  Y
Sbjct: 89  ILLSS--------------------SIQAT-QDNP----------YGESKLQGEQLLREY 117

Query: 186 G-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC-QLTNNEYVYQTLRDTEEILGKLP 243
               G  V       + G    P  ++   VI   C ++  NE +   + D      +L 
Sbjct: 118 AEEYGNTVYIYRWPNLFGKWCKPNYNS---VIATFCYKIARNEEI--QVNDRNV---ELT 169

Query: 244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVP--- 300
           L ++DD+       +E          T   V    +   +   Y     + +        
Sbjct: 170 LNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDN 229

Query: 301 -------KREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKS 336
                     + +  +         N D +    + IK   + 
Sbjct: 230 LFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRG 272

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 61.1 bits (148), Expect = 2e-10
 Identities = 37/220 (16%), Positives = 61/220 (27%), Gaps = 36/220 (16%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYI---VHTTLRP------------NLEDKSKVDLLKSL 53
           V +TG  GF+G +L+ +LL +  +   +   +R               +      L    
Sbjct: 76  VLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFK 135

Query: 54  PGAETRLIFFEAEIYDP------DTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVG 107
             A  RL     +  +P        +    +  D +   A  +     + Y  +    V 
Sbjct: 136 ELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA---FPYHELFGPNVA 192

Query: 108 AAKKIASFCVKSGTVKRLIY--TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN 165
              ++      +  +K   Y  TA V  A              I  T             
Sbjct: 193 GTAELIRIA-LTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGG--- 248

Query: 166 EYLRVYIESKMKSEKELLSYGS-SGLEVVALALGVVAGDT 204
                Y  SK   E  L        L V     G++  DT
Sbjct: 249 -----YGTSKWAGEVLLREANDLCALPVAVFRCGMILADT 283

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 58.9 bits (143), Expect = 5e-10
 Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 19/127 (14%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFE 64
           +V + G  GF+G+ L ++LL + +            +          + P       F E
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR------FLNHP----HFHFVE 51

Query: 65  AEIYDP-DTFENAIQGCDFVFHVATPLQHIDGYLYK--NVVEACVGAAKKIASFCVKSGT 121
            +I    +  E  ++ CD V  +      I+ Y      V E       +I  +CVK   
Sbjct: 52  GDISIHSEWIEYHVKKCDVVLPLVAIATPIE-YTRNPLRVFELDFEENLRIIRYCVKYR- 109

Query: 122 VKRLIYT 128
            KR+I+ 
Sbjct: 110 -KRIIFP 115

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 56.9 bits (137), Expect = 1e-09
 Identities = 30/267 (11%), Positives = 74/267 (27%), Gaps = 66/267 (24%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ + G  G  GS ++++  ++G+ V   +R    +  K      +      +   + +I
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVR----NAGK------ITQTHKDINILQKDI 51

Query: 68  YDPDTFENAIQGCDFVFHVATPL-----QHIDGYLYKNVVEACVGAAKKIASFCVKSGTV 122
           +D     + +   + V            +H+      +++    G               
Sbjct: 52  FDLT--LSDLSDQNVVVDAYGISPDEAEKHVTS--LDHLISVLNGTV------------S 95

Query: 123 KRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKEL 182
            RL+               S    +  +    +                  ++ K  + L
Sbjct: 96  PRLLVVGGA---------ASLQIDEDGNTLLESKGLRE-----APYYPTARAQAKQLEHL 141

Query: 183 LSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL 242
            S+  +      ++   +      P   T                 YQ  +D        
Sbjct: 142 KSHQ-AEFSWTYISPSAMFE----PGERTG---------------DYQIGKDHLLFGSDG 181

Query: 243 P-LVHIDDVCEAHIFCMEKPSMSGRFF 268
              + ++D   A +  +E+P+     F
Sbjct: 182 NSFISMEDYAIAVLDEIERPNHLNEHF 208

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 56.2 bits (135), Expect = 2e-09
 Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 9/113 (7%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            + + G  G +   L   LL    +  T     L+ +   +++        R+   E   
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDH-----ERVTVIEGSF 61

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG 120
            +P   E A+   + VF  A       G    ++V+A      +       +G
Sbjct: 62  QNPGXLEQAVTNAEVVFVGAME----SGSDMASIVKALSRXNIRRVIGVSMAG 110

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 56.4 bits (136), Expect = 2e-09
 Identities = 27/136 (19%), Positives = 40/136 (29%), Gaps = 19/136 (13%)

Query: 5   SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTL---RPNLEDKSKVDLLKSLPGAETRLI 61
            N  V + G  G  G  L+K++L++G     TL   R    D+     +           
Sbjct: 17  QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQE-------- 68

Query: 62  FFEAEIYDPDTFENAIQGCDFVFH-VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG 120
               +    D + +A QG D  F  + T         +  V         K A      G
Sbjct: 69  --VVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRV---DRDYVLKSAELAKAGG 123

Query: 121 TVKRLIYTASVLCASP 136
             K      S   A  
Sbjct: 124 -CKHFNLL-SSKGADK 137

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 54.6 bits (131), Expect = 5e-09
 Identities = 36/275 (13%), Positives = 76/275 (27%), Gaps = 58/275 (21%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ V G  G  GS ++ +   +G+ V   +R    D  K        GA    +      
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVR----DPQKAA---DRLGATVATL----VK 50

Query: 68  YDPDTFENAIQGCDFVFH-VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI 126
                 E  +   D V   ++ P     GYL+ +     V   +              + 
Sbjct: 51  EPLVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD--------TLAVF 102

Query: 127 YTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG 186
               +L ++ L   G+               D P +  ++        +    + L    
Sbjct: 103 ----ILGSASLAMPGADHPMI---------LDFPESAASQPWYDGALYQYYEYQFLQ--M 147

Query: 187 SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
           ++ +  + ++                  V G    L   +             G+   + 
Sbjct: 148 NANVNWIGISPSEAFPS-----GPATSYVAGKDTLLVGED-------------GQ-SHIT 188

Query: 247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIAS 281
             ++  A +  +E P+           V  A++  
Sbjct: 189 TGNMALAILDQLEHPTAIRDRI----VVRDADLEH 219

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 55.9 bits (135), Expect = 6e-09
 Identities = 69/400 (17%), Positives = 116/400 (29%), Gaps = 116/400 (29%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIV----------------HTTLRPNLEDKSKVDLLK 51
           +V V GG+G+ G      L  K Y V                  +L P      ++   K
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 52  SLPGAETRLIFFEAEIYDPDTFENAIQG--CDFVFHVA-------------TPLQHIDGY 96
           +L G    +  +  +I D +    + +    D V H                 +      
Sbjct: 73  ALTGK--SIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVY----T 126

Query: 97  LYKNVV------EACVGAAKKIASFCVKSGT--VKRLIYTASVLCASPLKEDGSAGYKDS 148
            + NV+       A     ++     VK GT                 +  +G       
Sbjct: 127 QHNNVIGTLNVLFAIKEFGEEC--HLVKLGTMGEYGTPNIDIEEGYITITHNGRTD---- 180

Query: 149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSS-GLEVVALALGVVAG----- 202
                     +P    +     Y  SK+     +     + G+    L  GVV G     
Sbjct: 181 -------TLPYPKQASS----FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDE 229

Query: 203 -------DTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL----------- 244
                     L Y +   + +        N +  Q        +G  PL           
Sbjct: 230 TEMHEELRNRLDYDAVFGTAL--------NRFCVQAA------VGH-PLTVYGKGGQTRG 274

Query: 245 -VHIDDVCEAHIFCMEKPSMSGRFFCTNVF---VSSAEIASCLQQNYPEF--HIKQEYLD 298
            + I D  +     +  P+ +G F   N F    S  E+AS + +   +    +K+  + 
Sbjct: 275 YLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVP 334

Query: 299 VPKRE-------IKWGGTKLEEKGFEYNYDLKMILDDSIK 331
            P+ E        K   TKL E G E +Y    +LD  + 
Sbjct: 335 NPRVEAEEHYYNAK--HTKLMELGLEPHYLSDSLLDSLLN 372

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 55.4 bits (134), Expect = 7e-09
 Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 15/90 (16%)

Query: 3   HKSNFKVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETR 59
              N K+ +TG  GF+ S + ++L  +G+           ++ +    D           
Sbjct: 26  PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDE---------- 75

Query: 60  LIFFEAEIYDPDTFENAIQGCDFVFHVATP 89
             F   ++   +      +G D VF++A  
Sbjct: 76  --FHLVDLRVMENCLKVTEGVDHVFNLAAD 103

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 53.4 bits (128), Expect = 3e-08
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 19/121 (15%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ + GG G++G+ ++K  L  G+  +   RPN    + +D  +SL       I  + E+
Sbjct: 13  KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG-----AIIVKGEL 67

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            + +     ++  D V       Q              +    KI      +G +KR + 
Sbjct: 68  DEHEKLVELMKKVDVVISALAFPQ--------------ILDQFKILEAIKVAGNIKRFLP 113

Query: 128 T 128
           +
Sbjct: 114 S 114

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 19/131 (14%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKG-YIVHTTLR-PNLEDKSKVDLLKSLPGAETRLIFFEAE 66
           V V GG G  G  + + LL+ G + V    R P    K     L+   GAE      + +
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNP---RKKAAKELRL-QGAEV----VQGD 59

Query: 67  IYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI 126
             D    E A+ G    F V    +           E  V   K +A    + G +  ++
Sbjct: 60  QDDQVIMELALNGAYATFIVTNYWESCSQ-------EQEVKQGKLLADLARRLG-LHYVV 111

Query: 127 YTASVLCASPL 137
           Y+  +     L
Sbjct: 112 YS-GLENIKKL 121

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 48/344 (13%), Positives = 99/344 (28%), Gaps = 85/344 (24%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ + G  G +G  L ++L  +G+ V    R             S       +    A++
Sbjct: 5   KILIAGC-GDLGLELARRLTAQGHEVTGLRR-------------SAQPMPAGVQTLIADV 50

Query: 68  YDPDTFENAIQG-CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI 126
             PDT  + +    + + +     ++ D +   + VE        +     +   ++ + 
Sbjct: 51  TRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSAL-----EGAPLQHVF 105

Query: 127 Y--TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLS 184
           +  +  V             Y   ++E      D P    +   +  +E    +E  L  
Sbjct: 106 FVSSTGV-------------YGQEVEEWLDE--DTPPIAKDFSGKRMLE----AEALL-- 144

Query: 185 YGSSGLEVVALALGVVAGDTNLP---YSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK 241
              +      L    + G   L     + TP          TN                 
Sbjct: 145 ---AAYSSTILRFSGIYGPGRLRMIRQAQTPEQWPAR-NAWTN----------------- 183

Query: 242 LPLVHIDDVCEAHIFCMEKPS--MSGRFF--CTNVFVSSAE----IASCLQQNYPEFHIK 293
              +H DD      + +++ S  +  R +    N  +   +    +A      YP     
Sbjct: 184 --RIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAG--- 238

Query: 294 QEYLDVPKREIKW-GGTKLEEKGFEYNY-DLKMILDDSIKCGRK 335
                 P +  K     +L   G++  Y D        +   R+
Sbjct: 239 ---ATPPVQGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMRE 279

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 13/125 (10%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPN--LEDKSKVDLLKSL--PGA 56
           M  +S  ++ + G  G++G  + K  LD G+     +R +    +  K  LL+S    GA
Sbjct: 1   MGSRS--RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA 58

Query: 57  ETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFC 116
                     I D  +   A++  D V      LQ        N+++A          F 
Sbjct: 59  NIV----HGSIDDHASLVEAVKNVDVVISTVGSLQIESQ---VNIIKAIKEVGTVKRFFP 111

Query: 117 VKSGT 121
            + G 
Sbjct: 112 SEFGN 116

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPN-LEDKSKVDLLKSLPGAETR 59
           MD KS  +V + GG G++G  ++   +  G+  +   RP  + +  KV +L        +
Sbjct: 1   MDKKS--RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK 58

Query: 60  LIFFEAEIYDPDTFENAIQGCDFVFH-VATPLQHIDGYLYKNVVEACVGAA 109
           LI  EA + D     +A++  D V   +A  +          +VEA   A 
Sbjct: 59  LI--EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAG 107

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 50.4 bits (120), Expect = 3e-07
 Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 18/125 (14%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLP--GAETRLIFFEA 65
           +V + G  GF+G ++    LD     +   RP     SK  + K+L   GA         
Sbjct: 12  RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIV----YG 67

Query: 66  EIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRL 125
            I + +  E  ++  +    V+T            V    +     +       GT+KR 
Sbjct: 68  LINEQEAMEKILKEHEIDIVVST------------VGGESILDQIALVKAMKAVGTIKRF 115

Query: 126 IYTAS 130
           + +  
Sbjct: 116 LPSEF 120

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 49.9 bits (119), Expect = 4e-07
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 23/126 (18%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRP---NLEDKSKVDLLKSLP--GAETRLIF 62
           K+ + G  G +G  ++   +  G   +  +R        ++K +L+ +    G       
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL--- 60

Query: 63  FEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTV 122
            E +I D +T   AI+  D V   A  L               +    KI     ++G V
Sbjct: 61  -EGDINDHETLVKAIKQVDIVICAAGRLL--------------IEDQVKIIKAIKEAGNV 105

Query: 123 KRLIYT 128
           K+   +
Sbjct: 106 KKFFPS 111

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 25/132 (18%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYI-VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAE 66
            + +TG  G +G+ +  + +       H  +R    +  KV           R + +   
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVR----NVEKVPDDWR-GKVSVRQLDYF-- 54

Query: 67  IYDPDTFENAIQGCDFVFHVATPLQHIDGYL--YKNVVEACVGAAKKIASFCVKSGTVKR 124
             + ++   A +G D V  + + +      +   +N+V     AAK       +SG V  
Sbjct: 55  --NQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVY----AAK-------QSG-VAH 100

Query: 125 LIYTASVLCASP 136
           +I+         
Sbjct: 101 IIFI-GYYADQH 111

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 21/88 (23%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIV------HTTLRPNLEDKSKVDLLKSLPGAETRLI 61
           ++ +TGG GFVGS L  KL+  G+ V       T  + N+E                   
Sbjct: 29  RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH------WIGHE----NFE 78

Query: 62  FFEAEIYDPDTFENAIQGCDFVFHVATP 89
               ++ +P   E      D ++H+A+P
Sbjct: 79  LINHDVVEPLYIE-----VDQIYHLASP 101

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 18/123 (14%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK--SKVDLLKSLPGAETRLIFFEA 65
           K+ + GG G++G ++++  L   +      RP   D   S V L +        +I  E 
Sbjct: 6   KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTII--EG 63

Query: 66  EIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRL 125
           E+ + +   + ++  D V                      + +   I +    +G +KR 
Sbjct: 64  EMEEHEKMVSVLKQVDIVISALPFPM--------------ISSQIHIINAIKAAGNIKRF 109

Query: 126 IYT 128
           + +
Sbjct: 110 LPS 112

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 32/135 (23%), Positives = 48/135 (35%), Gaps = 40/135 (29%)

Query: 11  VTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           VTG  G +G  +I+ LL K     I+            K   L    G E R   +    
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVRNV-----EKASTLAD-QGVEVRHGDYN--- 55

Query: 68  YDPDTFENAIQGCDFVFHVATP--------LQHIDGYLYKNVVEACVGAAKKIASFCVKS 119
             P++ + A  G   +  ++ P        +QH       NVV+    AA+        +
Sbjct: 56  -QPESLQKAFAGVSKLLFISGPHYDNTLLIVQH------ANVVK----AAR-------DA 97

Query: 120 GTVKRLIYTASVLCA 134
           G VK + YT     A
Sbjct: 98  G-VKHIAYT-GYAFA 110

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 15/131 (11%), Positives = 38/131 (29%), Gaps = 24/131 (18%)

Query: 1   MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYI--VHTTLRPNLEDKSKVDLLKSLPGAET 58
           M      +V + G  G  G  L+ ++L +  +  V    R  L +  ++         + 
Sbjct: 1   MHSTPK-RVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRL---------DN 50

Query: 59  RLIFFEAEIYDPDTFENAIQGCDFVFH-VATPL-QHIDGYLYKNVVEACVGAAKKIASFC 116
            +          +         D  F  + T + +      ++ V          +    
Sbjct: 51  PVGPLA------ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVD---FDLPLAVGKRA 101

Query: 117 VKSGTVKRLIY 127
           ++ G  +  + 
Sbjct: 102 LEMG-ARHYLV 111

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 37/127 (29%)

Query: 11  VTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           +TG  G +G ++I+ L+       IV    R    + +K   L +  G   R    +A+ 
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIV-R----NPAKAQALAA-QGITVR----QADY 53

Query: 68  YDPDTFENAIQGCDFVFHVATP------LQHIDGYLYKNVVEACVGAAKKIASFCVKSGT 121
            D     +A+QG + +  +++        QH      +NV+ A   A           G 
Sbjct: 54  GDEAALTSALQGVEKLLLISSSEVGQRAPQH------RNVINAAKAA-----------G- 95

Query: 122 VKRLIYT 128
           VK + YT
Sbjct: 96  VKFIAYT 102

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 4  KSNF----KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETR 59
           ++F    +V VTG  GF G WL   L   G  V       L   +   L ++       
Sbjct: 3  NNSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYS---LTAPTVPSLFETA-RVADG 58

Query: 60 LIFFEAEIYDPDTFENAIQGC--DFVFHVA 87
          +     +I D +    +I+    + VFH+A
Sbjct: 59 MQSEIGDIRDQNKLLESIREFQPEIVFHMA 88

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 45.3 bits (108), Expect = 1e-05
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 15/87 (17%)

Query: 3  HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIF 62
          H  + +  +TG  GFVG +L   L ++   V  T R N   ++K+            +  
Sbjct: 9  HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNN---EAKLP----------NVEM 55

Query: 63 FEAEIYDPDTFENAIQGC--DFVFHVA 87
             +I D    +  I     D++FH+A
Sbjct: 56 ISLDIMDSQRVKKVISDIKPDYIFHLA 82

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 20/150 (13%)

Query: 2   DHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLI 61
             +   +V + G  GF+G+ L ++LL + +  +     ++      D +           
Sbjct: 311 TARRRTRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGS----DAISRFLNHP-HFH 363

Query: 62  FFEAEIY-DPDTFENAIQGCDFVFH---VATPLQHIDGYLYKNVVEACVGAAKKIASFCV 117
           F E +I    +  E  ++ CD V     +ATP+++    L   V E       +I  +CV
Sbjct: 364 FVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLR--VFELDFEENLRIIRYCV 421

Query: 118 KSGTVKRLIY--TASV--LCA-SPLKEDGS 142
           K    KR+I+  T+ V  +C+     ED S
Sbjct: 422 KYR--KRIIFPSTSEVYGMCSDKYFDEDHS 449

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 13/88 (14%)

Query: 8  KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR-PNLEDKSKVDL-----LKSLPGAET--R 59
          ++ VTGG GF+GS  +++LL   Y          L D     L       +L   +   R
Sbjct: 2  RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVL-DS----LTYAGNRANLAPVDADPR 56

Query: 60 LIFFEAEIYDPDTFENAIQGCDFVFHVA 87
          L F   +I D       ++G D + H A
Sbjct: 57 LRFVHGDIRDAGLLARELRGVDAIVHFA 84

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 17/115 (14%)

Query: 5   SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFE 64
            N  + +TGG G  G   ++K+LD        +    E K + ++       + R+ FF 
Sbjct: 20  DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELK-QSEMAMEFN--DPRMRFFI 76

Query: 65  AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLY-------------KNVVEACV 106
            ++ D +    A++G D   H A  L+H+    Y              NV+ AC+
Sbjct: 77  GDVRDLERLNYALEGVDICIHAAA-LKHVPIAEYNPLECIKTNIMGASNVINACL 130

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 13/86 (15%)

Query: 8  KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK----SKVDLLKSLPGAETRLIFF 63
          K+ +TGG GF+GS L    L +G  +         D        D L  L        F 
Sbjct: 3  KLLITGGCGFLGSNLASFALSQGIDLI-----VF-DNLSRKGATDNLHWLSSLG-NFEFV 55

Query: 64 EAEIYDPDTFENAIQGC--DFVFHVA 87
            +I + +     I     D  FH+A
Sbjct: 56 HGDIRNKNDVTRLITKYMPDSCFHLA 81

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 40.1 bits (94), Expect = 7e-04
 Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 21/81 (25%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            V +TG  G VG  L  +L   G+ V   +R               P    R        
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVR-------------KEPKPGKRF------- 188

Query: 68  YDPDTFE-NAIQGCDFVFHVA 87
           +DP     + + G D + H+A
Sbjct: 189 WDPLNPASDLLDGADVLVHLA 209

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	341
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.97
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.96
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.96
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.96
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.94
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.94
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.94
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
1spx_A	278	Short-chain reductase family member (5L265); paral	99.94
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.94
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.94
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.93
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.93
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.93
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.93
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.93
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.93
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.93
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.93
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.92
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.92
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.92
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.92
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.92
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.92
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.92
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.92
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.92
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.92
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.92
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.92
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.92
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.92
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.92
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.92
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.92
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.92
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.91
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.91
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.91
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.91
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.91
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.91
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.91
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.91
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.91
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.91
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.91
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.91
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.91
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.91
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.91
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.91
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.91
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.91
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.91
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.91
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.91
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.91
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.91
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.91
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.91
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.91
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.91
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.91
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.91
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.91
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.91
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.91
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.91
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.91
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.91
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.91
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.9
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.9
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.9
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.9
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.9
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.9
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.9
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.9
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.9
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.9
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.9
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.9
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.9
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.9
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.9
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.9
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.9
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.9
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.9
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.9
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.9
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.9
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.9
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.9
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.9
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.9
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.9
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.9
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.9
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.9
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.9
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.9
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.9
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.9
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.9
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.9
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.9
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.9
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.9
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.9
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.9
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.9
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.9
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.9
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.9
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.9
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.9
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.9
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.89
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.89
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.89
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.89
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.89
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.89
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.89
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.89
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.89
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.89
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.89
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.89
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.89
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.89
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.89
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.89
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.89
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.89
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.89
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.89
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.89
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.89
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.89
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.89
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.89
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.88
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.88
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.88
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.88
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.88
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.88
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.88
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.88
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.88
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.88
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.88
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.88
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.88
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.88
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.88
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.88
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.88
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.88
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.88
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.88
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.87
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.87
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.87
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.87
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.87
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.87
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.87
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.87
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.86
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.86
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.86
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.86
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.86
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.85
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.85
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.85
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.85
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.85
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.85
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.85
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.85
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.85
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.85
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.84
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.84
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.83
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.83
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.83
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.82
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.82
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.82
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.82
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.82
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.82
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.81
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.8
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.79
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.79
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.78
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.78
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.76
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.75
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.69
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.68
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.67
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.65
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.57
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.55
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.53
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.52
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.51
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.49
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.45
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.45
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.4
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.32
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.25
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.25
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.17
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.07
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.94
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.91
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.9
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.8
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.77
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.76
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.72
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.71
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.68
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.68
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.62
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.55
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.53
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.52
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.44
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.44
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.32
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.32
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.28
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.27
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.26
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.24
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.12
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.06
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.03
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.94
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.94
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.94
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.94
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.94
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.93
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.92
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.86
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.81
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.8
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.77
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.77
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.77
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.77
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.75
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.74
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.72
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.71
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.69
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.67
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.67
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.67
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.65
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.62
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.61
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.59
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.57
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.54
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.51
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.5
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.49
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.47
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.47
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.47
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.46
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.45
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.45
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.45
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.41
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.4
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.4
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.4
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.4
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.38
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.37
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.36
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.34
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.34
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.33
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.31
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.31
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.31
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.3
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.29
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.29
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.29
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.28
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.28
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.27
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.25
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.25
1lnq_A	336	MTHK channels, potassium channel related protein;	97.22
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.21
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.2
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.18
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.17
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.14
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.14
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.14
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.14
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.14
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.12
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.12
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.1
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.09
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.07
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.07
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.06
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.05
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.05
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.04
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.97
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.96
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.95
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.95
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.94
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.93
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.92
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.91
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.88
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.88
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.87
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.86
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	96.86
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.86
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.86
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.84
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	96.84
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	96.83
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.81
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.81
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.79
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.79
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.78
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.78
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.77
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.76
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.75
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.74
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.74
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.73
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.72
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	96.7
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.69
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.69
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.69
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.65
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.63
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.63
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.63
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.63
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.62
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.62
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	96.61
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.6
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.6
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.59
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	96.59
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	96.59
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.59
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.58
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.58
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.58
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.58
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	96.56
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.54
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.54
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.53
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.53
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.51
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.5
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.49
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.49
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.48
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	96.48
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.48
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	96.46
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.45
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.45
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.43
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.43
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.43
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.43
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.42
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.42
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.42
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.41

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=5e-46  Score=337.50  Aligned_cols=307  Identities=19%  Similarity=0.145  Sum_probs=241.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHhhhCCCC--CCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLLKSLPGA--ETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|+|||||||||||++|++.|+++|++|++++| +... ......+......  ..+++++.+|++|++.+.++++++|
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDN-FSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            3589999999999999999999999999999999 6543 2233333322100  0479999999999999999999999


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      +|||+|+...... .......+++|+.++.+++++|++.+ +++|||+||.+ +|+...      ..+++|+++.     
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~-vyg~~~------~~~~~E~~~~-----  169 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSS-TYGDHP------ALPKVEENIG-----  169 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGG-GGTTCC------CSSBCTTCCC-----
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHH-hcCCCC------CCCCccCCCC-----
Confidence            9999999765433 33345789999999999999999998 99999999998 454433      4678888743     


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhh
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEE  237 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  237 (341)
                           .|.+.|+.+|..+|++++.++ +.|++++++||++|||++.........++..++..+..+.  ..++++.+   
T Consensus       170 -----~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~---  241 (351)
T 3ruf_A          170 -----NPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGET---  241 (351)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC---
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCe---
Confidence                 346899999999999999988 5699999999999999987654333345667766665555  23344444   


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcCC-C-CCceEEEec-cccCHHHHHHHHHHhCCCCc----ccc---CcCCCCcceEeec
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEKP-S-MSGRFFCTN-VFVSSAEIASCLQQNYPEFH----IKQ---EYLDVPKREIKWG  307 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~~-~-~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~----~~~---~~~~~~~~~~~~d  307 (341)
                         .++|||++|+|++++.++... . ..++||+++ ..+|+.|+++.+++.++...    .+.   ...+.......+|
T Consensus       242 ---~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d  318 (351)
T 3ruf_A          242 ---SRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQAD  318 (351)
T ss_dssp             ---EECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBC
T ss_pred             ---EEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeC
Confidence               899999999999999999872 3 345999987 56999999999999885421    111   1123455678899


Q ss_pred             chhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          308 GTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       308 ~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ++|+++ |||+|+++++++|+++++|+++.
T Consensus       319 ~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  348 (351)
T 3ruf_A          319 VTKAIDLLKYRPNIKIREGLRLSMPWYVRF  348 (351)
T ss_dssp             CHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            999988 99999999999999999999864

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=1.4e-45  Score=329.11  Aligned_cols=291  Identities=15%  Similarity=0.186  Sum_probs=234.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|||||||||||++|++.|+++|++|++++| +...   .. +       .+++++.+|++ ++.+.++++++|+|||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~---~~-~-------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih   68 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTR-SIGN---KA-I-------NDYEYRVSDYT-LEDLINQLNDVDAVVH   68 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeC-CCCc---cc-C-------CceEEEEcccc-HHHHHHhhcCCCEEEE
Confidence            479999999999999999999999999999999 6322   11 1       27889999999 9999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +|+.....   ..+..+++|+.++.+++++|++.+ +++|||+||.+ +|+...      ..+++|+++.          
T Consensus        69 ~a~~~~~~---~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~-vyg~~~------~~~~~E~~~~----------  127 (311)
T 3m2p_A           69 LAATRGSQ---GKISEFHDNEILTQNLYDACYENN-ISNIVYASTIS-AYSDET------SLPWNEKELP----------  127 (311)
T ss_dssp             CCCCCCSS---SCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG-GCCCGG------GCSBCTTSCC----------
T ss_pred             ccccCCCC---ChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHH-HhCCCC------CCCCCCCCCC----------
Confidence            99987665   244789999999999999999998 99999999988 554443      4678888732          


Q ss_pred             chhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhccCCC
Q 019415          166 EYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEILGKL  242 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  242 (341)
                      .|.+.|+.+|..+|++++.++ +.+++++++||+.+||+.....    .++..++..+..+.  ..++++.+      .+
T Consensus       128 ~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~------~~  197 (311)
T 3m2p_A          128 LPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN----YMINRFFRQAFHGEQLTLHANSVA------KR  197 (311)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C----CHHHHHHHHHHTCCCEEESSBCCC------CE
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC----CHHHHHHHHHHcCCCeEEecCCCe------EE
Confidence            346899999999999999998 5799999999999999987643    35666776665554  22344444      89


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCcccc--Cc-CCCCcceEeecchhhhh-cCCc
Q 019415          243 PLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQ--EY-LDVPKREIKWGGTKLEE-KGFE  317 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~--~~-~~~~~~~~~~d~~k~~~-lg~~  317 (341)
                      +|+|++|+|+++..+++++...++||+++ ..+|+.|+++.+++.++......  .. .+.......+|++|+++ |||+
T Consensus       198 ~~v~v~Dva~a~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  277 (311)
T 3m2p_A          198 EFLYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFS  277 (311)
T ss_dssp             EEEEHHHHHHHHHHHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCC
T ss_pred             ceEEHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCC
Confidence            99999999999999999877666999987 46999999999999996432111  11 23456778999999988 9999


Q ss_pred             ccccHHHHHHHHHHHHHHcCCCC
Q 019415          318 YNYDLKMILDDSIKCGRKSGYLP  340 (341)
Q Consensus       318 ~~~~~~~~l~~~~~~~~~~~~~~  340 (341)
                      |+++++++|+++++|+++.+..|
T Consensus       278 p~~~~~~~l~~~~~~~~~~~~~~  300 (311)
T 3m2p_A          278 TDYNFATAVEEIHLLMRGLDDVP  300 (311)
T ss_dssp             CSCCHHHHHHHHHHHHCC-----
T ss_pred             cccCHHHHHHHHHHHHHhcccCc
Confidence            99999999999999998876544

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=9e-46  Score=335.17  Aligned_cols=303  Identities=16%  Similarity=0.147  Sum_probs=235.2

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--   79 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   79 (341)
                      .++|+|||||||||||++|++.|+++|  ++|++++| .... .....+..+. ...+++++.+|++|++.+.+++++  
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~-~~~~-~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   98 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA-LTYS-GNLNNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKERD   98 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC-CCTT-CCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec-cccc-cchhhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence            356899999999999999999999999  77888777 5422 2222232221 235899999999999999999987  


Q ss_pred             CCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                      +|+|||+|+...... ....+..+++|+.++.+++++|++.+ +++|||+||.+++.....      ..+++|+++.   
T Consensus        99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~------~~~~~E~~~~---  168 (346)
T 4egb_A           99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGK------TGRFTEETPL---  168 (346)
T ss_dssp             CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCS------SCCBCTTSCC---
T ss_pred             CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCc------CCCcCCCCCC---
Confidence            999999999876543 34456889999999999999999998 999999999985443322      4678888733   


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccch
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDT  235 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  235 (341)
                             .|.+.|+.+|..+|.+++.++ +.|++++++||+.+||++....    .++..++..+..+.  ..++.+.+ 
T Consensus       169 -------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-  236 (346)
T 4egb_A          169 -------APNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE----KLIPLMVTNALEGKKLPLYGDGLN-  236 (346)
T ss_dssp             -------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT----SHHHHHHHHHHTTCCCEEETTSCC-
T ss_pred             -------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc----chHHHHHHHHHcCCCceeeCCCCe-
Confidence                   346899999999999999998 5699999999999999986543    45666666665554  23344444 


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhh
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKL  311 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~  311 (341)
                           .++|||++|+|+++..+++++..+++||++++ .+|+.|+++.+++.++.......+   .+.......+|++|+
T Consensus       237 -----~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~  311 (346)
T 4egb_A          237 -----VRDWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKM  311 (346)
T ss_dssp             -----EECEEEHHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHH
T ss_pred             -----EEeeEEHHHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHH
Confidence                 89999999999999999988775569999985 599999999999998643221221   133445677999999


Q ss_pred             hh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          312 EE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       312 ~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ++ |||+|+++++++|+++++|+++.
T Consensus       312 ~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (346)
T 4egb_A          312 KNEFDWEPKYTFEQGLQETVQWYEKN  337 (346)
T ss_dssp             HHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence            87 99999999999999999999875

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=1.3e-45  Score=332.98  Aligned_cols=324  Identities=31%  Similarity=0.592  Sum_probs=237.0

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |.. ++++||||||+||||++|++.|+++|++|++++| +.....+...+..++....+++++.+|++|++.+.++++++
T Consensus         1 ~~~-~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   78 (337)
T 2c29_D            1 MGS-QSETVCVTGASGFIGSWLVMRLLERGYTVRATVR-DPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGC   78 (337)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTC
T ss_pred             CCC-CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEC-CcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCC
Confidence            553 4689999999999999999999999999999999 76543333333222211136889999999999999999999


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      |+|||+|+.......++.+..+++|+.++.+++++|.+.+.+++|||+||.+++|+....     ..+++|+++.+.+..
T Consensus        79 d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~-----~~~~~E~~~~~~~~~  153 (337)
T 2c29_D           79 TGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ-----LPVYDESCWSDMEFC  153 (337)
T ss_dssp             SEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC-----CSEECTTCCCCHHHH
T ss_pred             CEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC-----CcccCcccCCchhhh
Confidence            999999997643323344468999999999999999987657999999999877754321     345777764432110


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhcc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEIL  239 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (341)
                      .+ ...+.+.|+.||.++|.+++.+. ++|++++++||++|||+.....  .+..+......+.+....+....      
T Consensus       154 ~~-~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~--~~~~~~~~~~~~~g~~~~~~~~~------  224 (337)
T 2c29_D          154 RA-KKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS--MPPSLITALSPITGNEAHYSIIR------  224 (337)
T ss_dssp             HH-HCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS--CCHHHHHHTHHHHTCGGGHHHHT------
T ss_pred             cc-cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC--CCchHHHHHHHHcCCCccccccC------
Confidence            00 00134679999999999999887 5699999999999999975543  22222211111222222222111      


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcC--CCCcceEeecchhhhhcCCc
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYL--DVPKREIKWGGTKLEEKGFE  317 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~lg~~  317 (341)
                       ...|+|++|+|++++.+++++...+.|+++++.+|+.|+++.+.+.+|...++..+.  ........+|++|+++|||+
T Consensus       225 -~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~  303 (337)
T 2c29_D          225 -QGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFE  303 (337)
T ss_dssp             -EEEEEEHHHHHHHHHHHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTCC
T ss_pred             -CCCEEEHHHHHHHHHHHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCCC
Confidence             345999999999999999876666789888777999999999999886554544332  22345678999999669999


Q ss_pred             ccccHHHHHHHHHHHHHHcCCCCC
Q 019415          318 YNYDLKMILDDSIKCGRKSGYLPQ  341 (341)
Q Consensus       318 ~~~~~~~~l~~~~~~~~~~~~~~~  341 (341)
                      |+++++++|+++++|+++.+++|.
T Consensus       304 p~~~l~e~l~~~~~~~~~~~~~~~  327 (337)
T 2c29_D          304 FKYSLEDMFTGAVDTCRAKGLLPP  327 (337)
T ss_dssp             CCCCHHHHHHHHHHHHHHTTSSCS
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCc
Confidence            999999999999999999998874

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=3.8e-46  Score=336.56  Aligned_cols=327  Identities=31%  Similarity=0.547  Sum_probs=231.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+||||||+||||++|++.|+++||+|++++| +..+......+..++ ...+++++.+|++|++.+.++++++|+|||
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   86 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR-DPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFH   86 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEES-CTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEc-CcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence            479999999999999999999999999999999 765432222222221 123688999999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +|+.......++.+.++++|+.++.+++++|.+.+.+++|||+||.+++++.....   ...+++|+++.+.+...|.. 
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~---~~~~~~E~~~~~~~~~~~~~-  162 (338)
T 2rh8_A           87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDG---TGLVVDEKNWTDIEFLTSAK-  162 (338)
T ss_dssp             ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTC---SCCCCCTTTTTCC--------
T ss_pred             eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCC---CCcccChhhccchhhccccC-
Confidence            99976433233334589999999999999999884489999999988665432211   01367787655432211100 


Q ss_pred             chhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCc
Q 019415          166 EYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL  244 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (341)
                      .+.+.|+.||.++|.+++.+. ++|++++++||++|||+.....  .+..+..+...+.+....++...+...+.+.++|
T Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  240 (338)
T 2rh8_A          163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSD--VPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSI  240 (338)
T ss_dssp             CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSS--CCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEE
T ss_pred             CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC--CCchHHHHHHHHcCCccccccccccccccCcccE
Confidence            012369999999999999887 5699999999999999976543  3333333322222222222211111011224589


Q ss_pred             ccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccCcCCC-CcceEeecchhhhhcCCcccccHH
Q 019415          245 VHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV-PKREIKWGGTKLEEKGFEYNYDLK  323 (341)
Q Consensus       245 i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~d~~k~~~lg~~~~~~~~  323 (341)
                      +|++|+|++++.+++++...+.||++++.+|+.|+++.+.+.++...+|....+. ......+|++|+++|||+|+++++
T Consensus       241 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~  320 (338)
T 2rh8_A          241 AHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPKSKLIISSEKLVKEGFSFKYGIE  320 (338)
T ss_dssp             EEHHHHHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTSCSSCSCCCCCHHHHHHTCCCSCCHH
T ss_pred             EEHHHHHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCcCcceeechHHHHHhCCCCCCCHH
Confidence            9999999999999987666679999887799999999999988654444332211 112378999999669999999999


Q ss_pred             HHHHHHHHHHHHcCCCC
Q 019415          324 MILDDSIKCGRKSGYLP  340 (341)
Q Consensus       324 ~~l~~~~~~~~~~~~~~  340 (341)
                      ++|+++++|+++.+++|
T Consensus       321 ~gl~~~~~~~~~~~~~~  337 (338)
T 2rh8_A          321 EIYDESVEYFKAKGLLQ  337 (338)
T ss_dssp             HHHHHHHHHHHHTTCC-
T ss_pred             HHHHHHHHHHHHcCCCC
Confidence            99999999999999886

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=7.7e-45  Score=324.38  Aligned_cols=291  Identities=19%  Similarity=0.172  Sum_probs=229.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+|||||||||||++|++.|+++|++|++++| +.......        ...+++++.+|+.|++ +.+++++ |+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~--------~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~   69 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDN-LSSGRREF--------VNPSAELHVRDLKDYS-WGAGIKG-DVVFHF   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-CSSCCGGG--------SCTTSEEECCCTTSTT-TTTTCCC-SEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeC-CCCCchhh--------cCCCceEEECccccHH-HHhhcCC-CEEEEC
Confidence            68999999999999999999999999999999 66431111        1247899999999998 8888888 999999


Q ss_pred             ccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           87 ATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        87 a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      |+...... ...++..+++|+.++.+++++|++.+ +++|||+||.++ |+...      ..+++|++..          
T Consensus        70 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~v-yg~~~------~~~~~e~~~~----------  131 (312)
T 3ko8_A           70 AANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTV-YGDAD------VIPTPEEEPY----------  131 (312)
T ss_dssp             CSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGG-GCSCS------SSSBCTTSCC----------
T ss_pred             CCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHH-hCCCC------CCCCCCCCCC----------
Confidence            99654433 34456889999999999999999998 899999999984 44433      4677887632          


Q ss_pred             chhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc---cccccccchhhccCC
Q 019415          166 EYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE---YVYQTLRDTEEILGK  241 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  241 (341)
                      .+.+.|+.+|..+|.+++.++ +.|++++++||+++||++....     ++..++..+....   ..++++.+      .
T Consensus       132 ~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~------~  200 (312)
T 3ko8_A          132 KPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHG-----VIYDFIMKLRRNPNVLEVLGDGTQ------R  200 (312)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSS-----HHHHHHHHHHHCTTEEEEC----C------E
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCC-----hHHHHHHHHHhCCCCeEEcCCCCe------E
Confidence            346899999999999999998 5699999999999999976543     4555555554442   23444444      8


Q ss_pred             CCcccHHHHHHHHHHhhcC---CC-CCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---------CCCCcceEeec
Q 019415          242 LPLVHIDDVCEAHIFCMEK---PS-MSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---------LDVPKREIKWG  307 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~---~~-~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~d  307 (341)
                      ++|+|++|+|++++.++++   +. ..++||++++ .+|+.|+++.+.+.++... +...         .+.......+|
T Consensus       201 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d  279 (312)
T 3ko8_A          201 KSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRP-EIRLVPSTPDGRGWPGDVKYMTLA  279 (312)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCC-EEEEC----------CCCSEECBC
T ss_pred             EeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCC-ceeecCccccccCCCCCccccccC
Confidence            9999999999999999987   33 3459999884 6999999999999984321 1111         13355678899


Q ss_pred             chhhhh-cCCcccccHHHHHHHHHHHHHHcCC
Q 019415          308 GTKLEE-KGFEYNYDLKMILDDSIKCGRKSGY  338 (341)
Q Consensus       308 ~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~  338 (341)
                      ++|+++ |||+|+++++++|+++++|++++++
T Consensus       280 ~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~  311 (312)
T 3ko8_A          280 VTKLMKLTGWRPTMTSAEAVKKTAEDLAKELW  311 (312)
T ss_dssp             CHHHHHHHCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhc
Confidence            999976 9999999999999999999998764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.4e-44  Score=327.52  Aligned_cols=295  Identities=15%  Similarity=0.150  Sum_probs=234.5

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .++|+|||||||||||++|++.|++.|++|++++| +...              .+++++.+|++|++.+.++++++|+|
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r-~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~v   81 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDL-RPSG--------------TGGEEVVGSLEDGQALSDAIMGVSAV   81 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEES-SCCS--------------SCCSEEESCTTCHHHHHHHHTTCSEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeC-CCCC--------------CCccEEecCcCCHHHHHHHHhCCCEE
Confidence            35689999999999999999999999999999999 6542              37889999999999999999999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+|+........ .+..+++|+.++.+++++|++.+ +++|||+||.+ +|+.....    ..+++|++..        
T Consensus        82 ih~A~~~~~~~~~-~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~-vyg~~~~~----~~~~~E~~~~--------  146 (347)
T 4id9_A           82 LHLGAFMSWAPAD-RDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGE-VYPENRPE----FLPVTEDHPL--------  146 (347)
T ss_dssp             EECCCCCCSSGGG-HHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGG-GTTTTSCS----SSSBCTTSCC--------
T ss_pred             EECCcccCcchhh-HHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHH-HhCCCCCC----CCCcCCCCCC--------
Confidence            9999987665433 36899999999999999999998 99999999998 45442222    5678888733        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCcee-------------CCCCCCCCC-------CCchhhhhHhhH
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVA-------------GDTNLPYSS-------TPVSVIGGLCQL  222 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~-------------G~~~~~~~~-------~~~~~~~~~~~~  222 (341)
                        .+.+.|+.+|..+|++++.++ +.+++++++||+.+|             |++......       ...++..++..+
T Consensus       147 --~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 4id9_A          147 --CPNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSR  224 (347)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHH
Confidence              346899999999999999998 679999999999999             665321000       012455566555


Q ss_pred             hcCc--cccccccchhhccCCCCc----ccHHHHHHHHHHhhcCCC-CCceEEEecc-ccCHHHHHHHHHHhCCCCcccc
Q 019415          223 TNNE--YVYQTLRDTEEILGKLPL----VHIDDVCEAHIFCMEKPS-MSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQ  294 (341)
Q Consensus       223 ~~~~--~~~~~~~~~~~~~~~~~~----i~v~D~a~~~~~~~~~~~-~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~  294 (341)
                      ..+.  ..++.+.+      .++|    +|++|+|++++.+++++. .+++||++++ .+|+.|+++.+++.++. +.+.
T Consensus       225 ~~~~~~~~~g~~~~------~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~  297 (347)
T 4id9_A          225 DIGEPSHILARNEN------GRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGL-PIVT  297 (347)
T ss_dssp             CCSSCCEEEEECTT------CCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCC-CEEE
T ss_pred             HcCCCeEEeCCCCc------ccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCC-CCce
Confidence            5554  33444443      8899    999999999999999874 4559999874 59999999999999853 3333


Q ss_pred             CcCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcC
Q 019415          295 EYLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSG  337 (341)
Q Consensus       295 ~~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~  337 (341)
                      ...+.......+|++|+++ |||+|+++++++|+++++|+++..
T Consensus       298 ~~~p~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~  341 (347)
T 4id9_A          298 VDFPGDGVYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRL  341 (347)
T ss_dssp             EECSSCCCBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             eeCCCcccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence            3334444578899999988 999999999999999999998753

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.7e-44  Score=329.93  Aligned_cols=310  Identities=18%  Similarity=0.167  Sum_probs=234.0

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC-ChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY-DPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~   78 (341)
                      |...++|+|||||||||||++|++.|+++ |++|++++| +....   ..+..    ..+++++.+|++ +.+.+.++++
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~---~~~~~----~~~v~~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDM-QTDRL---GDLVK----HERMHFFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEES-CCTTT---GGGGG----STTEEEEECCTTTCHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeC-Chhhh---hhhcc----CCCeEEEeCccCCCHHHHHHHhc
Confidence            33445689999999999999999999998 999999999 76432   11211    248999999999 9999999999


Q ss_pred             CCCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPP  157 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (341)
                      ++|+|||+|+...... .......+++|+.++.+++++|++.+  ++|||+||.+ +|+...      ..+++|++....
T Consensus        91 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~-vyg~~~------~~~~~e~~~~~~  161 (372)
T 3slg_A           91 KCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSE-VYGMCA------DEQFDPDASALT  161 (372)
T ss_dssp             HCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGG-GGBSCC------CSSBCTTTCCEE
T ss_pred             cCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHH-HhCCCC------CCCCCccccccc
Confidence            9999999999876543 23345788999999999999999998  8999999988 554433      456777763311


Q ss_pred             CCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCC----CCCCchhhhhHhhHhcCc--ccccc
Q 019415          158 DHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPY----SSTPVSVIGGLCQLTNNE--YVYQT  231 (341)
Q Consensus       158 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~  231 (341)
                      ..+   ...|.+.|+.+|.++|++++.++..+++++++||++|||++....    .....++..++..+..+.  ..++.
T Consensus       162 ~~p---~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (372)
T 3slg_A          162 YGP---INKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDG  238 (372)
T ss_dssp             ECC---TTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             cCC---CCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCC
Confidence            000   113567999999999999999983399999999999999986531    012235666666665554  23333


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCC---CCceEEEec-c-ccCHHHHHHHHHHhCCCCc----cc--cCcC---
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSGRFFCTN-V-FVSSAEIASCLQQNYPEFH----IK--QEYL---  297 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~n~~~-~-~~s~~e~~~~i~~~~~~~~----~~--~~~~---  297 (341)
                      +.+      .++|||++|+|+++..+++++.   .+++||+++ + .+|+.|+++.+++.++...    .+  ....   
T Consensus       239 g~~------~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~  312 (372)
T 3slg_A          239 GSQ------KRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETT  312 (372)
T ss_dssp             GCC------EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-
T ss_pred             Cce------EEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeecc
Confidence            333      8999999999999999998764   345999998 4 6999999999999873211    01  0000   


Q ss_pred             --------CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          298 --------DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       298 --------~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                              ........+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       313 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  360 (372)
T 3slg_A          313 SGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGH  360 (372)
T ss_dssp             ------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred             ccccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence                    0244567889999988 99999999999999999999754

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1e-43  Score=320.97  Aligned_cols=311  Identities=16%  Similarity=0.142  Sum_probs=238.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   81 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +...... ...+....  ..++.++.+|++|++.+.++++  ++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADN-LVNSKREAIARIEKIT--GKTPAFHETDVSDERALARIFDAHPIT   80 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-CSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEec-CCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHHHhccCCc
Confidence            4589999999999999999999999999999999 6654222 22222211  2478899999999999999998  899


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      +|||+|+...... .......++.|+.++.++++++++.+ +++|||+||.+ +|+...      ..+++|+++.     
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~-~~g~~~------~~~~~e~~~~-----  147 (341)
T 3enk_A           81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSAT-VYGVPE------RSPIDETFPL-----  147 (341)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGG-GBCSCS------SSSBCTTSCC-----
T ss_pred             EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecce-EecCCC------CCCCCCCCCC-----
Confidence            9999999876433 33345789999999999999999998 89999999988 454433      4678887633     


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cC-CceEEEEecCceeCCCCCCC------CCCCchhhhhHhhHhcCc---ccc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SS-GLEVVALALGVVAGDTNLPY------SSTPVSVIGGLCQLTNNE---YVY  229 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-~~~~~vlRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~---~~~  229 (341)
                           .+.+.|+.+|..+|.+++.++ +. +++++++||+++||+.....      .....+++.+.+...+..   ..+
T Consensus       148 -----~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (341)
T 3enk_A          148 -----SATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVF  222 (341)
T ss_dssp             -----BCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEE
T ss_pred             -----CCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEe
Confidence                 346899999999999999988 55 59999999999999965321      001234555555454432   223


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCC---CCCceEEEec-cccCHHHHHHHHHHhCCCCccccC---cCCCCcc
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP---SMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQE---YLDVPKR  302 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~---~~~~~~~  302 (341)
                      +.....+++.+.++|+|++|+|++++.++++.   ...++||+++ ..+|+.|+++.+++.++. +.+..   ..+....
T Consensus       223 g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~  301 (341)
T 3enk_A          223 GSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGR-AVPYELVARRPGDVA  301 (341)
T ss_dssp             CSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCS
T ss_pred             CCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCC-CcceeeCCCCCCCcc
Confidence            32222334555899999999999999999762   3455999987 469999999999999853 22222   1234566


Q ss_pred             eEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcC
Q 019415          303 EIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSG  337 (341)
Q Consensus       303 ~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~  337 (341)
                      ...+|++|+++ |||+|+++++++|+++++|++++.
T Consensus       302 ~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~  337 (341)
T 3enk_A          302 ECYANPAAAAETIGWKAERDLERMCADHWRWQENNP  337 (341)
T ss_dssp             EECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHST
T ss_pred             ccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcC
Confidence            78899999987 999999899999999999999874

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=4.2e-44  Score=319.84  Aligned_cols=290  Identities=16%  Similarity=0.178  Sum_probs=223.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ||+||||||+||||++|++.|+++|+ |+++.| .....  ...      ....+.++.+|+++ +.+.++++++|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~-~~~~~--~~~------~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih   69 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDN-LSSGN--EEF------VNEAARLVKADLAA-DDIKDYLKGAEEVWH   69 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC-EEEECC-CSSCC--GGG------SCTTEEEECCCTTT-SCCHHHHTTCSEEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEc-CCCCC--hhh------cCCCcEEEECcCCh-HHHHHHhcCCCEEEE
Confidence            36899999999999999999999994 444455 33221  111      12478999999999 889999999999999


Q ss_pred             eccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           86 VATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        86 ~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      +|+...... ...++..+++|+.++.+++++|++.+ +++|||+||.+ +|+...      ..+++|++..         
T Consensus        70 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~-vyg~~~------~~~~~E~~~~---------  132 (313)
T 3ehe_A           70 IAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTST-VYGEAK------VIPTPEDYPT---------  132 (313)
T ss_dssp             CCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGG-GGCSCS------SSSBCTTSCC---------
T ss_pred             CCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchH-HhCcCC------CCCCCCCCCC---------
Confidence            999754432 44456899999999999999999998 89999999998 454333      4677777632         


Q ss_pred             cchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC-c--cccccccchhhccC
Q 019415          165 NEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN-E--YVYQTLRDTEEILG  240 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~  240 (341)
                       .+.+.|+.+|..+|.+++.++ +.|++++++||++|||++....     ++..++..+... .  ..++.+.+      
T Consensus       133 -~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~------  200 (313)
T 3ehe_A          133 -HPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHG-----VIYDFIMKLKRNPEELEILGNGEQ------  200 (313)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCS-----HHHHHHHHHHHCTTEEEESTTSCC------
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcC-----hHHHHHHHHHcCCCceEEeCCCCe------
Confidence             346889999999999999998 6799999999999999976543     455555555444 2  23444444      


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcC------CCCcceEeecchhhhh
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYL------DVPKREIKWGGTKLEE  313 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~------~~~~~~~~~d~~k~~~  313 (341)
                      .++|+|++|+|++++.+++.....++||++++ .+|+.|+++.+++.++.. .+....      ........+|++|+++
T Consensus       201 ~~~~i~v~Dva~a~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~  279 (313)
T 3ehe_A          201 NKSYIYISDCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLS-PRFRFTGGDRGWKGDVPVMLLSIEKLKR  279 (313)
T ss_dssp             EECCEEHHHHHHHHHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCC-CEEEEC------------CCBCCHHHHH
T ss_pred             EEeEEEHHHHHHHHHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCC-CceEECCCccCCccccceeccCHHHHHH
Confidence            89999999999999999985555569999885 699999999999998532 222111      2234456799999977


Q ss_pred             cCCcccccHHHHHHHHHHHHHHc
Q 019415          314 KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       314 lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |||+|+++++++|+++++|++++
T Consensus       280 lG~~p~~~~~e~l~~~~~~~~~~  302 (313)
T 3ehe_A          280 LGWKPRYNSEEAVRMAVRDLVED  302 (313)
T ss_dssp             HTCCCSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHHHHhC
Confidence            99999999999999999999876

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=4.7e-44  Score=320.62  Aligned_cols=315  Identities=36%  Similarity=0.612  Sum_probs=225.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC-chhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE-DKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      +|+||||||+||||++|++.|+++|++|++++| +.. ...+...+..++....+++++.+|++|++.+.++++++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIR-ADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECC-CC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEe-CCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            378999999999999999999999999999887 321 101122222222111257889999999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+.......++.+.++++|+.++.+++++|.+. + +++|||+||.+++++....     ..+++|+++.+.+...+ 
T Consensus        80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~-----~~~~~e~~~~~~~~~~~-  152 (322)
T 2p4h_X           80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKD-----KDVLDESDWSDVDLLRS-  152 (322)
T ss_dssp             ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSC-----CSEECTTCCCCHHHHHH-
T ss_pred             EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCC-----CeecCCccccchhhhcc-
Confidence            99986532223334458999999999999999988 6 8999999999866643221     34667765432210000 


Q ss_pred             Ccchh-hhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCC
Q 019415          164 HNEYL-RVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK  241 (341)
Q Consensus       164 ~~~~~-~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (341)
                       ..+. ..|+.||.++|.+++.+. ++|++++++||++|||+.....  .+.....+...+.+....++. .       .
T Consensus       153 -~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~--~~~~~~~~~~~~~g~~~~~~~-~-------~  221 (322)
T 2p4h_X          153 -VKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPK--LPDSIEKALVLVLGKKEQIGV-T-------R  221 (322)
T ss_dssp             -HCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSS--CCHHHHHHTHHHHSCGGGCCE-E-------E
T ss_pred             -cCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCC--CCchHHHHHHHHhCCCccCcC-C-------C
Confidence             0111 269999999999999987 5799999999999999976543  222222222222222222222 1       3


Q ss_pred             CCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCccccC--cCC-CCcceEeecchhhhhcCCcc
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQE--YLD-VPKREIKWGGTKLEEKGFEY  318 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~--~~~-~~~~~~~~d~~k~~~lg~~~  318 (341)
                      ++|+|++|+|++++.+++.+...|.||++++.+|+.|+++.+.+.++..++|..  ... .......+|++|+++|||+|
T Consensus       222 ~~~i~v~Dva~a~~~~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p  301 (322)
T 2p4h_X          222 FHMVHVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGARLPDLNTKKLVDAGFDF  301 (322)
T ss_dssp             EEEEEHHHHHHHHHHHHHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCCEECCEECCHHHHHTTCCC
T ss_pred             cCEEEHHHHHHHHHHHhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCCCcceecccHHHHHhCCcc
Confidence            489999999999999998766667899666779999999999998865444432  111 11145789999996699999


Q ss_pred             cccHHHHHHHHHHHHHHcCCC
Q 019415          319 NYDLKMILDDSIKCGRKSGYL  339 (341)
Q Consensus       319 ~~~~~~~l~~~~~~~~~~~~~  339 (341)
                      +++++++|+++++|+++.+++
T Consensus       302 ~~~~~~~l~~~~~~~~~~~~~  322 (322)
T 2p4h_X          302 KYTIEDMFDDAIQCCKEKGYL  322 (322)
T ss_dssp             CCCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHHHHhcCCC
Confidence            999999999999999988764

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=1.7e-43  Score=322.25  Aligned_cols=299  Identities=19%  Similarity=0.119  Sum_probs=231.6

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHH--CCCeEEEEecCCCCchh-------hhhHhhhCCCCCCceEEEecCCCChHHHH
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLD--KGYIVHTTLRPNLEDKS-------KVDLLKSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      .++|+||||||+||||++|++.|++  .|++|++++| +.....       .........  ..++.++.+|+++++.+.
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDK-FRSNTLFSNNRPSSLGHFKNLI--GFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEEC-CCCC-------CCCCCCGGGGT--TCCSEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEEC-CCccccccccchhhhhhhhhcc--ccCceEEECCCCCHHHHH
Confidence            3568999999999999999999999  9999999999 654211       001111111  236799999999999999


Q ss_pred             HH-hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           75 NA-IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        75 ~~-~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                      ++ ..++|+|||+|+..... ...++..+++|+.++.+++++|++.+ ++ |||+||.+ +|+...       .+++|++
T Consensus        85 ~~~~~~~D~vih~A~~~~~~-~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~-vyg~~~-------~~~~E~~  153 (362)
T 3sxp_A           85 RLEKLHFDYLFHQAAVSDTT-MLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAG-VYGNTK-------APNVVGK  153 (362)
T ss_dssp             HHTTSCCSEEEECCCCCGGG-CCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGG-GGCSCC-------SSBCTTS
T ss_pred             HhhccCCCEEEECCccCCcc-ccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHH-HhCCCC-------CCCCCCC
Confidence            99 78999999999976653 33456899999999999999999998 66 99999988 554333       3788877


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc--cccc
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY--VYQT  231 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  231 (341)
                      ..          .|.+.|+.+|..+|.+++.++.. ++++++||+++|||+.........++..++..+..+..  .++.
T Consensus       154 ~~----------~p~~~Y~~sK~~~E~~~~~~~~~-~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (362)
T 3sxp_A          154 NE----------SPENVYGFSKLCMDEFVLSHSND-NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEF  222 (362)
T ss_dssp             CC----------CCSSHHHHHHHHHHHHHHHTTTT-SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGG
T ss_pred             CC----------CCCChhHHHHHHHHHHHHHHhcc-CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECC
Confidence            32          34689999999999999998833 99999999999999876431112356666666655542  2344


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcC----CCCcceEee
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYL----DVPKREIKW  306 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~----~~~~~~~~~  306 (341)
                      +.+      .++|+|++|+|++++.+++.+. .|+||++++ .+|+.|+++.+++.++  ..+....    ........+
T Consensus       223 g~~------~~~~i~v~Dva~ai~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g--~~~~~~~~~~~~~~~~~~~~  293 (362)
T 3sxp_A          223 GEQ------LRDFVYIEDVIQANVKAMKAQK-SGVYNVGYSQARSYNEIVSILKEHLG--DFKVTYIKNPYAFFQKHTQA  293 (362)
T ss_dssp             GCC------EEECEEHHHHHHHHHHHTTCSS-CEEEEESCSCEEEHHHHHHHHHHHHC--CCEEECCC-------CCCCB
T ss_pred             CCe------EEccEEHHHHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHcC--CCceEECCCCCcCcccceec
Confidence            333      8999999999999999998765 469999874 5999999999999997  3322222    234567789


Q ss_pred             cchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          307 GGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       307 d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |++|+++ |||+|+++++++|+++++|+++.
T Consensus       294 d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  324 (362)
T 3sxp_A          294 HIEPTILDLDYTPLYDLESGIKDYLPHIHAI  324 (362)
T ss_dssp             CCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999976 99999999999999999999754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=9.3e-43  Score=314.08  Aligned_cols=301  Identities=16%  Similarity=0.096  Sum_probs=230.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +|+||||||+||||++|++.|+++|  ++|++++| +... ...+.+..+.. ..+++++.+|++|++.+.+++.++|+|
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r-~~~~-~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDK-LGYG-SNPANLKDLED-DPRYTFVKGDVADYELVKELVRKVDGV   79 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC-CCTT-CCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHTCSEE
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEec-Cccc-CchhHHhhhcc-CCceEEEEcCCCCHHHHHHHhhCCCEE
Confidence            4789999999999999999999996  89999998 6421 11122222211 347899999999999999999999999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+|+...... ...++..+++|+.++.+++++|.+.+..++|||+||.++ |+...      ..+++|++..       
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v-yg~~~------~~~~~E~~~~-------  145 (336)
T 2hun_A           80 VHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEV-YGDIL------KGSFTENDRL-------  145 (336)
T ss_dssp             EECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGG-GCCCS------SSCBCTTBCC-------
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHH-HCCCC------CCCcCCCCCC-------
Confidence            99999865322 233458899999999999999999862379999999984 44332      3567777632       


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhcc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEIL  239 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  239 (341)
                         .+.+.|+.+|..+|.+++.++ +.+++++++||+.|||+.....    .++..++..+..+.  ..++.+.+     
T Consensus       146 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-----  213 (336)
T 2hun_A          146 ---MPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE----KLIPKTIIRASLGLKIPIYGTGKN-----  213 (336)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT----SHHHHHHHHHHTTCCEEEETC--------
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC----chHHHHHHHHHcCCCceEeCCCCc-----
Confidence               235789999999999999988 6799999999999999976432    34555555554443  23344433     


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhhhh-c
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKLEE-K  314 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~-l  314 (341)
                       .++++|++|+|+++..+++.+..+++||++++ .+|+.|+++.+++.++.......+   .+.......+|++|+++ |
T Consensus       214 -~~~~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  292 (336)
T 2hun_A          214 -VRDWLYVEDHVRAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDL  292 (336)
T ss_dssp             -CEEEEEHHHHHHHHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHH
T ss_pred             -eeeeEEHHHHHHHHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHh
Confidence             89999999999999999976554559999885 599999999999998543111111   12233456789999987 9


Q ss_pred             CCcccccHHHHHHHHHHHHHHc
Q 019415          315 GFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       315 g~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ||+|+++++++|+++++|+++.
T Consensus       293 G~~p~~~~~~~l~~~~~~~~~~  314 (336)
T 2hun_A          293 KWRPKYTFDEGIKKTIDWYLKN  314 (336)
T ss_dssp             CCCCSSCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHHHHhC
Confidence            9999989999999999999865

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=7.2e-43  Score=316.88  Aligned_cols=307  Identities=15%  Similarity=0.084  Sum_probs=233.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHhhh-CCC-CCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLLKS-LPG-AETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~-~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|+|||||||||||++|++.|++.|++|++++| +... ......+.. +.. ...+++++.+|++|++.+.++++++|
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN-FATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            4579999999999999999999999999999999 6542 122222211 100 01378999999999999999999999


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      +|||+|+...... ...++..+++|+.++.+++++|.+.+ +++|||+||.+++. ...      ..+++|+++.     
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~-~~~------~~~~~E~~~~-----  171 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYG-DHP------GLPKVEDTIG-----  171 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGT-TCC------CSSBCTTCCC-----
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcC-CCC------CCCCCCCCCC-----
Confidence            9999999765322 23356889999999999999999998 89999999998544 332      3577787643     


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc--ccccccchhh
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY--VYQTLRDTEE  237 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  237 (341)
                           .+.+.|+.+|..+|.+++.++ +.+++++++||+.+||+..........++..++..+..+..  .++++.+   
T Consensus       172 -----~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~---  243 (352)
T 1sb8_A          172 -----KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGET---  243 (352)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC---
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCc---
Confidence                 236899999999999999987 56999999999999999765431122345555555544442  2333333   


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcCC-C-CCceEEEec-cccCHHHHHHHHHHhC---CCCcc--cc--CcCCCCcceEeec
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEKP-S-MSGRFFCTN-VFVSSAEIASCLQQNY---PEFHI--KQ--EYLDVPKREIKWG  307 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~~-~-~~g~~n~~~-~~~s~~e~~~~i~~~~---~~~~~--~~--~~~~~~~~~~~~d  307 (341)
                         .++|+|++|+|++++.++... . ..++||+++ ..+|+.|+++.+++.+   +....  +.  ...+.......+|
T Consensus       244 ---~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d  320 (352)
T 1sb8_A          244 ---SRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLAD  320 (352)
T ss_dssp             ---EECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBC
T ss_pred             ---eEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCC
Confidence               889999999999999988763 2 345999987 4699999999999988   43211  11  1112344567889


Q ss_pred             chhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          308 GTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       308 ~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ++|+++ |||+|+++++++|+++++|+++.
T Consensus       321 ~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  350 (352)
T 1sb8_A          321 ISKAAKLLGYAPKYDVSAGVALAMPWYIMF  350 (352)
T ss_dssp             CHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence            999987 99999989999999999999764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=7.2e-43  Score=314.02  Aligned_cols=303  Identities=19%  Similarity=0.183  Sum_probs=232.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      ||+||||||+||||++|++.|+++|++|++++| +.....     ..+.   .+++++.+|+++++.+.++++  ++|+|
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~-----~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~d~v   71 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDN-LQTGHE-----DAIT---EGAKFYNGDLRDKAFLRDVFTQENIEAV   71 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCCG-----GGSC---TTSEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeC-CCcCch-----hhcC---CCcEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            478999999999999999999999999999999 654311     1111   268899999999999999998  89999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+|+...... ....+..+++|+.++.+++++|++.+ +++|||+||.++ |+...      ..+++|+++.       
T Consensus        72 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~-~~~~~------~~~~~E~~~~-------  136 (330)
T 2c20_A           72 MHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAAT-YGEVD------VDLITEETMT-------  136 (330)
T ss_dssp             EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGG-GCSCS------SSSBCTTSCC-------
T ss_pred             EECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCcee-eCCCC------CCCCCcCCCC-------
Confidence            99999865432 23456889999999999999999988 899999999884 54333      4678888743       


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCC-----CCCCchhhhhHhhHhcCc---ccccccc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPY-----SSTPVSVIGGLCQLTNNE---YVYQTLR  233 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~  233 (341)
                         .+.+.|+.+|..+|.+++.++ +.+++++++||+++||++....     .....+++.+.....+..   ..++...
T Consensus       137 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (330)
T 2c20_A          137 ---NPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDY  213 (330)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCC
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCcc
Confidence               236899999999999999988 6699999999999999964221     001234555555544332   1222111


Q ss_pred             chhhccCCCCcccHHHHHHHHHHhhcCCC---CCceEEEec-cccCHHHHHHHHHHhCCCCccccCc---CCCCcceEee
Q 019415          234 DTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKW  306 (341)
Q Consensus       234 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~  306 (341)
                      ..+++.+.++|||++|+|+++..+++++.   ..++||+++ ..+|+.|+++.+++.++. +++...   .........+
T Consensus       214 ~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~  292 (330)
T 2c20_A          214 NTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNH-EIPAEVAPRRAGDPARLVA  292 (330)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTS-CCCEEEECCCSSCCSEECB
T ss_pred             ccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCCCCCCccccccc
Confidence            11234458999999999999999987642   246999987 469999999999999853 232221   1234567889


Q ss_pred             cchhhhh-cCCcccc-cHHHHHHHHHHHHHHc
Q 019415          307 GGTKLEE-KGFEYNY-DLKMILDDSIKCGRKS  336 (341)
Q Consensus       307 d~~k~~~-lg~~~~~-~~~~~l~~~~~~~~~~  336 (341)
                      |++|+++ |||+|++ +++++|+++++|++++
T Consensus       293 d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~  324 (330)
T 2c20_A          293 SSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQ  324 (330)
T ss_dssp             CCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHhCCCCccCCHHHHHHHHHHHHHHh
Confidence            9999987 9999998 8999999999999876

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=1.5e-43  Score=315.99  Aligned_cols=295  Identities=17%  Similarity=0.174  Sum_probs=227.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   81 (341)
                      +|+||||||+||||++|++.|+++  |++|++++| +.....    +.      .+++++.+|++|++.+.++++  ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~~----~~------~~~~~~~~D~~d~~~~~~~~~~~~~d   70 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDI-RKLNTD----VV------NSGPFEVVNALDFNQIEHLVEVHKIT   70 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEES-CCCSCH----HH------HSSCEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcC-CCcccc----cc------CCCceEEecCCCHHHHHHHHhhcCCC
Confidence            378999999999999999999999  899999999 765411    11      146789999999999999998  899


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      +|||+|+..........+..+++|+.++.+++++|++.+ +++|||+||.+++++...      ..+.+|+++.      
T Consensus        71 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~------~~~~~e~~~~------  137 (312)
T 2yy7_A           71 DIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTP------KENTPQYTIM------  137 (312)
T ss_dssp             EEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSC------SSSBCSSCBC------
T ss_pred             EEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCC------CCCccccCcC------
Confidence            999999976543233456889999999999999999998 899999999985443222      3456666522      


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCC-CchhhhhHhhHhcCc-cccccccchhhc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSST-PVSVIGGLCQLTNNE-YVYQTLRDTEEI  238 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~  238 (341)
                          .+.+.|+.+|..+|.+++.++ +++++++++||+.+||+...+.... ..+...+...+..+. ..++.+.+    
T Consensus       138 ----~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  209 (312)
T 2yy7_A          138 ----EPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSET----  209 (312)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTC----
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCc----
Confidence                346889999999999999887 5699999999999999865432111 123444445454443 23333333    


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCC----CceEEEeccccCHHHHHHHHHHhCCCCccccCcC-C---CCcceEeecchh
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSM----SGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYL-D---VPKREIKWGGTK  310 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~----~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~-~---~~~~~~~~d~~k  310 (341)
                        .++|+|++|+|+++..+++++..    +++||++++.+|+.|+++.+.+.++...++.... .   .......+|++|
T Consensus       210 --~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k  287 (312)
T 2yy7_A          210 --KMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPDFRQKIADSWPASIDDSQ  287 (312)
T ss_dssp             --CEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEEECCCTHHHHHTTSCSSBCCHH
T ss_pred             --eeeeeeHHHHHHHHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCCceEeccCccccccccccccCCHHH
Confidence              89999999999999999987653    2699999877999999999999997443332211 0   011235789999


Q ss_pred             hhh-cCCcccccHHHHHHHHHHHHH
Q 019415          311 LEE-KGFEYNYDLKMILDDSIKCGR  334 (341)
Q Consensus       311 ~~~-lg~~~~~~~~~~l~~~~~~~~  334 (341)
                      +++ |||+|+++++++|+++++|++
T Consensus       288 ~~~~lG~~p~~~l~~~l~~~~~~~k  312 (312)
T 2yy7_A          288 AREDWDWKHTFDLESMTKDMIEHLS  312 (312)
T ss_dssp             HHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred             HHHHcCCCCCCCHHHHHHHHHHHhC
Confidence            988 999999999999999999984

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=1.1e-42  Score=313.70  Aligned_cols=299  Identities=19%  Similarity=0.182  Sum_probs=230.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC---C---CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK---G---YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |+||||||+||||++|++.|+++   |   ++|++++| +... .....+..+. ...+++++.+|++|++.+.+++.++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r-~~~~-~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS-LTYA-GNRANLAPVD-ADPRLRFVHGDIRDAGLLARELRGV   77 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC-CCTT-CCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC-CCcc-Cchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHhcCC
Confidence            68999999999999999999997   8   99999999 6432 1111222221 1247899999999999999999999


Q ss_pred             CEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDH  159 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (341)
                      |+|||+|+...... ..+.+..+++|+.++.+++++|.+.+ +++|||+||.++ |+...      ..+++|+++.    
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~v-yg~~~------~~~~~E~~~~----  145 (337)
T 1r6d_A           78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQV-YGSID------SGSWTESSPL----  145 (337)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGG-GCCCS------SSCBCTTSCC----
T ss_pred             CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHH-hCCCC------CCCCCCCCCC----
Confidence            99999999765322 23345889999999999999999998 899999999984 44332      3567777632    


Q ss_pred             CCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchh
Q 019415          160 PLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTE  236 (341)
Q Consensus       160 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  236 (341)
                            .+.+.|+.+|..+|.+++.++ +.+++++++||+.+||+.....    .++..++..+..+.  ..++.+.+  
T Consensus       146 ------~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--  213 (337)
T 1r6d_A          146 ------EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE----KLIPLFVTNLLDGGTLPLYGDGAN--  213 (337)
T ss_dssp             ------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT----SHHHHHHHHHHTTCCEEEETTSCC--
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC----ChHHHHHHHHhcCCCcEEeCCCCe--
Confidence                  236789999999999999987 5699999999999999976432    34555555554443  22333333  


Q ss_pred             hccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhhh
Q 019415          237 EILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKLE  312 (341)
Q Consensus       237 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~  312 (341)
                          .++|+|++|+|+++..+++.+..+++||++++ .+|+.|+++.+.+.++.......+   .+.......+|++|++
T Consensus       214 ----~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~  289 (337)
T 1r6d_A          214 ----VREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIE  289 (337)
T ss_dssp             ----EEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHH
T ss_pred             ----eEeeEeHHHHHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHH
Confidence                78999999999999999976554559999885 599999999999998543111111   1222334568999998


Q ss_pred             h-cCCcccccHHHHHHHHHHHHHHc
Q 019415          313 E-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       313 ~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      + |||+|+++++++|+++++|+++.
T Consensus       290 ~~lG~~p~~~~~e~l~~~~~~~~~~  314 (337)
T 1r6d_A          290 RELGYRPQVSFADGLARTVRWYREN  314 (337)
T ss_dssp             HHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             HHcCCCCCCCHHHHHHHHHHHHHhc
Confidence            7 99999989999999999999865

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=8.8e-43  Score=312.29  Aligned_cols=292  Identities=16%  Similarity=0.126  Sum_probs=228.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   82 (341)
                      +.|+||||||+||||++|++.|+++|++|++++| +... ..      +     +++++.+|++|++.+.+++++  +|+
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r-~~~~-~~------l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~   77 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSR-NNEA-KL------P-----NVEMISLDIMDSQRVKKVISDIKPDY   77 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CTTC-CC------T-----TEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEec-CCcc-cc------c-----eeeEEECCCCCHHHHHHHHHhcCCCE
Confidence            4589999999999999999999999999999999 6543 10      1     688999999999999999986  999


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCC-CCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLK-EDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~-~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      |||+|+...... ...++..+++|+.++.+++++|.+.+.+++|||+||.+++++.. .      ..+++|+++.     
T Consensus        78 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~------~~~~~E~~~~-----  146 (321)
T 2pk3_A           78 IFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPE------ESPVSEENQL-----  146 (321)
T ss_dssp             EEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGG------GCSBCTTSCC-----
T ss_pred             EEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCC------CCCCCCCCCC-----
Confidence            999999865432 23456899999999999999998762279999999998544321 2      4678887633     


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc---C---c-cccccc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN---N---E-YVYQTL  232 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~---~---~-~~~~~~  232 (341)
                           .+.+.|+.+|..+|.+++.++ +.|++++++||+++||++....    .++..++..+..   +   . ..++.+
T Consensus       147 -----~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~  217 (321)
T 2pk3_A          147 -----RPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG----FVTQDFAKQIVDIEMEKQEPIIKVGNL  217 (321)
T ss_dssp             -----BCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT----SHHHHHHHHHHHHHTTSSCSEEEESCS
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC----chHHHHHHHHHHHhcCCCCCeEEeCCC
Confidence                 336899999999999999987 5699999999999999976543    234445444433   2   2 233333


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccC-----cCCCCcceEee
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQE-----YLDVPKREIKW  306 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~  306 (341)
                      .+      .++++|++|+|++++.+++.+..+++||++++ .+|+.|+++.+.+.++.. .+..     ..+.......+
T Consensus       218 ~~------~~~~v~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~~~~~~~~  290 (321)
T 2pk3_A          218 EA------VRDFTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVK-IDTELNPLQLRPSEVPTLIG  290 (321)
T ss_dssp             SC------EEEEEEHHHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSC-CEEEECGGGCCSSCCSBCCB
T ss_pred             Cc------EEeeEEHHHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCC-CceeeccccCCCcccchhcc
Confidence            33      78999999999999999987644569999875 599999999999998532 1111     12234466889


Q ss_pred             cchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          307 GGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       307 d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |++|+++ |||+|+++++++|+++++|++++
T Consensus       291 d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  321 (321)
T 2pk3_A          291 SNKRLKDSTGWKPRIPLEKSLFEILQSYRQA  321 (321)
T ss_dssp             CCHHHHHHHCCCCCSCHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHcCCCcCCCHHHHHHHHHHHHhcC
Confidence            9999988 99999999999999999999753

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=1.6e-42  Score=314.03  Aligned_cols=304  Identities=12%  Similarity=0.079  Sum_probs=229.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ||+||||||+||||++|++.|+++  |++|++++| +... .....+..+.  ..+++++.+|++|++.+.++++++|+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~-~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~v   79 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDK-LTYA-GNKANLEAIL--GDRVELVVGDIADAELVDKLAAKADAI   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEEC-CCTT-CCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeC-CCCC-CChhHHhhhc--cCCeEEEECCCCCHHHHHHHhhcCCEE
Confidence            579999999999999999999999  899999999 6532 1112222221  247899999999999999999999999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCC------CCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDG------SAGYKDSIDETCYTP  156 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~------~~~~~~~~~E~~~~~  156 (341)
                      ||+|+...... ...++..+++|+.++.+++++|.+.+ + +|||+||.++++ .....      ......+++|+++. 
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg-~~~~~~~~~~~~~~~~~~~~E~~~~-  155 (348)
T 1oc2_A           80 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYG-DLPLREDLPGHGEGPGEKFTAETNY-  155 (348)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGC-CBCCGGGSTTTTCSTTSSBCTTSCC-
T ss_pred             EECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeC-CCcccccccccccccCCCcCCCCCC-
Confidence            99999865322 23345889999999999999999998 6 999999998543 22100      00001567776532 


Q ss_pred             CCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--ccccccc
Q 019415          157 PDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLR  233 (341)
Q Consensus       157 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  233 (341)
                               .+.+.|+.+|..+|.+++.++ +.|++++++||+.+||+.....    .++..++..+..+.  ..++.+.
T Consensus       156 ---------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  222 (348)
T 1oc2_A          156 ---------NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE----KFIPRQITNILAGIKPKLYGEGK  222 (348)
T ss_dssp             ---------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT----SHHHHHHHHHHHTCCCEEETTSC
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc----chHHHHHHHHHcCCCceEecCCC
Confidence                     236789999999999999987 5699999999999999986432    34555555544443  2233333


Q ss_pred             chhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecch
Q 019415          234 DTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGT  309 (341)
Q Consensus       234 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~  309 (341)
                      +      .++++|++|+|+++..+++.+..+++||++++ .+|+.|+++.+.+.++.......+   .+.......+|++
T Consensus       223 ~------~~~~i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~  296 (348)
T 1oc2_A          223 N------VRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDAS  296 (348)
T ss_dssp             C------EEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCH
T ss_pred             c------eEeeEEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHH
Confidence            3      88999999999999999976544459999885 599999999999998543211111   1223345678999


Q ss_pred             hhhh-cCCccccc-HHHHHHHHHHHHHHc
Q 019415          310 KLEE-KGFEYNYD-LKMILDDSIKCGRKS  336 (341)
Q Consensus       310 k~~~-lg~~~~~~-~~~~l~~~~~~~~~~  336 (341)
                      |+++ |||+|+++ ++++|+++++|+++.
T Consensus       297 k~~~~lG~~p~~~~~~~~l~~~~~~~~~~  325 (348)
T 1oc2_A          297 KLRDELGWTPQFTDFSEGLEETIQWYTDN  325 (348)
T ss_dssp             HHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence            9987 99999998 999999999999865

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2e-42  Score=312.61  Aligned_cols=299  Identities=18%  Similarity=0.217  Sum_probs=222.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +.....   .+..     .+++++.+|++|++.+.++++++|+||
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~---~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vi   82 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHR-PSSQIQ---RLAY-----LEPECRVAEMLDHAGLERALRGLDGVI   82 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC-TTSCGG---GGGG-----GCCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec-ChHhhh---hhcc-----CCeEEEEecCCCHHHHHHHHcCCCEEE
Confidence            3479999999999999999999999999999999 765422   1211     268899999999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      |+|+..... ..+.+..+++|+.++.+++++|.+.+ +++|||+||.+++.+... .    ..+ +|+++..+..     
T Consensus        83 h~a~~~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~-~----~~~-~E~~~~~p~~-----  149 (342)
T 2x4g_A           83 FSAGYYPSR-PRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQ-G----LPG-HEGLFYDSLP-----  149 (342)
T ss_dssp             EC-------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTT-S----SCB-CTTCCCSSCC-----
T ss_pred             ECCccCcCC-CCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCC-C----CCC-CCCCCCCccc-----
Confidence            999976532 23345889999999999999999998 899999999985443221 1    133 6665322100     


Q ss_pred             cchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          165 NEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                       ...+.|+.+|..+|.+++.++ + |++++++||+.+||+.....    . +..++..+..+..... +.+      .++
T Consensus       150 -~~~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~----~-~~~~~~~~~~~~~~~~-~~~------~~~  215 (342)
T 2x4g_A          150 -SGKSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP----T-TGRVITAIGNGEMTHY-VAG------QRN  215 (342)
T ss_dssp             -TTSCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC----S-TTHHHHHHHTTCCCEE-ECC------EEE
T ss_pred             -cccChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc----c-HHHHHHHHHcCCCccc-cCC------Ccc
Confidence             015789999999999999987 5 99999999999999976211    1 2334444444432211 222      789


Q ss_pred             cccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCC---ccccCc------------------------
Q 019415          244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEF---HIKQEY------------------------  296 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~---~~~~~~------------------------  296 (341)
                      ++|++|+|+++..+++++..+++||++++.+|+.|+++.+.+.++..   .+|...                        
T Consensus       216 ~i~v~Dva~~~~~~~~~~~~g~~~~v~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (342)
T 2x4g_A          216 VIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDET  295 (342)
T ss_dssp             EEEHHHHHHHHHHHHHHSCTTCEEEECCEEEEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC--------------
T ss_pred             eeeHHHHHHHHHHHHhCCCCCceEEEcCCcccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHH
Confidence            99999999999999987665569999885599999999999987532   112110                        


Q ss_pred             -CCCCcceEeecchhhhh-cCC-cccccHHHHHHHHHHHHHHcCCCC
Q 019415          297 -LDVPKREIKWGGTKLEE-KGF-EYNYDLKMILDDSIKCGRKSGYLP  340 (341)
Q Consensus       297 -~~~~~~~~~~d~~k~~~-lg~-~~~~~~~~~l~~~~~~~~~~~~~~  340 (341)
                       .........+|++|+++ ||| +| ++++++|+++++|+++.|+++
T Consensus       296 ~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~~  341 (342)
T 2x4g_A          296 AIEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNGYFN  341 (342)
T ss_dssp             --CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCCC
Confidence             00112467899999988 999 99 699999999999999999986

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=1.2e-42  Score=310.06  Aligned_cols=299  Identities=20%  Similarity=0.187  Sum_probs=227.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      |+||||||+||||+++++.|+++|++|++++| .....  ..   .+.   .+++++.+|++|++.+.++++  ++|+||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r-~~~~~--~~---~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   71 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDN-LATGK--RE---NVP---KGVPFFRVDLRDKEGVERAFREFRPTHVS   71 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECC-CSSCC--GG---GSC---TTCCEECCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEEC-CCcCc--hh---hcc---cCeEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            68999999999999999999999999999988 54321  11   111   367789999999999999998  899999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCC-CCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPL-KEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |+|+...... ...+...+++|+.++.+++++|.+.+ +++|||+||.+.+|+. ..      ..+++|+++.       
T Consensus        72 ~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~------~~~~~E~~~~-------  137 (311)
T 2p5y_A           72 HQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPE------GERAEETWPP-------  137 (311)
T ss_dssp             ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCT------TCCBCTTSCC-------
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCC------CCCcCCCCCC-------
Confidence            9999765322 23345789999999999999999988 8999999999335643 22      3567777632       


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc--ccccccchhhcc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY--VYQTLRDTEEIL  239 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  239 (341)
                         .+.+.|+.+|..+|.+++.++ +.+++++++||+++||++...... ..++..++..+..+..  .+ .....+++.
T Consensus       138 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~  212 (311)
T 2p5y_A          138 ---RPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGE-AGVVAIFAERVLKGLPVTLY-ARKTPGDEG  212 (311)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSST-THHHHHHHHHHHHTCCEEEE-CSSSTTSCC
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCc-CcHHHHHHHHHHcCCCcEEE-ecccCCCCC
Confidence               235789999999999999987 569999999999999997654310 2345555555544432  22 000001223


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhhhhcC
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKLEEKG  315 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~lg  315 (341)
                      +.++|+|++|+|+++..+++.+  +++||++++ .+|+.|+++.+++.++. +.+...   .........+|++|+++||
T Consensus       213 ~~~~~i~v~Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~lg  289 (311)
T 2p5y_A          213 CVRDYVYVGDVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGK-APEVQPAPPRPGDLERSVLSPLKLMAHG  289 (311)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTC-CCCEEEECCCTTCCSBCCBCCHHHHTTT
T ss_pred             eEEeeEEHHHHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCC-CCCceeCCCCccchhhccCCHHHHHHCC
Confidence            3789999999999999999764  569999875 59999999999998853 222211   1233456789999997799


Q ss_pred             CcccccHHHHHHHHHHHHHHc
Q 019415          316 FEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       316 ~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |+|+++++++|+++++|+++.
T Consensus       290 ~~p~~~~~~~l~~~~~~~~~~  310 (311)
T 2p5y_A          290 WRPKVGFQEGIRLTVDHFRGA  310 (311)
T ss_dssp             CCCSSCHHHHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHHHHhh
Confidence            999989999999999999764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=2.1e-42  Score=314.47  Aligned_cols=303  Identities=17%  Similarity=0.102  Sum_probs=229.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   82 (341)
                      ++|+||||||+||||++|++.|++.|++|++++| +..........  +. ...+++++.+|+++++.+.+++++  +|+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~--~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   83 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL-TAPTVPSLFET--AR-VADGMQSEIGDIRDQNKLLESIREFQPEI   83 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCSSSSCHHHH--TT-TTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeC-CCcccchhhHh--hc-cCCceEEEEccccCHHHHHHHHHhcCCCE
Confidence            3589999999999999999999999999999999 76542221111  11 134789999999999999999986  899


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |||+|+...... ...++..+++|+.++.+++++|.+.+.+++|||+||.++++ ....     ..+++|++..      
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg-~~~~-----~~~~~E~~~~------  151 (357)
T 1rkx_A           84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYD-NKEW-----IWGYRENEAM------  151 (357)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBC-CCCS-----SSCBCTTSCB------
T ss_pred             EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhC-CCCc-----CCCCCCCCCC------
Confidence            999999643322 33355889999999999999999875478999999998544 3221     2466776522      


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cC---------CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SS---------GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQ  230 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~---------~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  230 (341)
                          .+.+.|+.+|..+|.+++.++ +.         |++++++||+.|||++....   ..++..++..+..+. ..+.
T Consensus       152 ----~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~---~~~~~~~~~~~~~g~~~~~~  224 (357)
T 1rkx_A          152 ----GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL---DRIVPDILRAFEQSQPVIIR  224 (357)
T ss_dssp             ----CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS---SCHHHHHHHHHHTTCCEECS
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc---ccHHHHHHHHHhcCCCEEEC
Confidence                236889999999999999887 33         89999999999999975432   235666766665554 2333


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcC----C-CCCceEEEec---cccCHHHHHHHHHHhCCCC-ccccC--cCCC
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEK----P-SMSGRFFCTN---VFVSSAEIASCLQQNYPEF-HIKQE--YLDV  299 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~----~-~~~g~~n~~~---~~~s~~e~~~~i~~~~~~~-~~~~~--~~~~  299 (341)
                      .+.      +.++|+|++|+|++++.+++.    + ...++||+++   ..+|+.|+++.+.+.++.. .+...  ..+.
T Consensus       225 ~~~------~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~  298 (357)
T 1rkx_A          225 NPH------AIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPH  298 (357)
T ss_dssp             CTT------CEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------
T ss_pred             CCC------CeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCc
Confidence            333      388999999999999998874    2 3456999986   3589999999999988531 11111  1123


Q ss_pred             CcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          300 PKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       300 ~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ......+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       299 ~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  336 (357)
T 1rkx_A          299 EAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNW  336 (357)
T ss_dssp             CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CcccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence            44567899999987 99999999999999999999764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=4.3e-42  Score=314.80  Aligned_cols=304  Identities=15%  Similarity=0.113  Sum_probs=230.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +.......        ...+++++.+|++|++.+.++++++|+||
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~--------~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vi   98 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDW-KKNEHMTE--------DMFCDEFHLVDLRVMENCLKVTEGVDHVF   98 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCSSSCG--------GGTCSEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEEC-CCccchhh--------ccCCceEEECCCCCHHHHHHHhCCCCEEE
Confidence            4689999999999999999999999999999999 65431110        01368899999999999999999999999


Q ss_pred             EeccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           85 HVATPLQHID--GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        85 ~~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |+|+......  ....+..+++|+.++.+++++|++.+ +++|||+||.+++.......  ....+++|+++.+.     
T Consensus        99 h~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~--~~~~~~~E~~~~~~-----  170 (379)
T 2c5a_A           99 NLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLE--TTNVSLKESDAWPA-----  170 (379)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSS--SSSCEECGGGGSSB-----
T ss_pred             ECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCC--ccCCCcCcccCCCC-----
Confidence            9999765421  23456889999999999999999988 89999999988544221100  00234666652221     


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc---ccccccchhhc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY---VYQTLRDTEEI  238 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  238 (341)
                         .+.+.|+.+|..+|.+++.++ +.+++++++||+.+||+..........++..++..+..+..   .++++.+    
T Consensus       171 ---~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~----  243 (379)
T 2c5a_A          171 ---EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ----  243 (379)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC----
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCe----
Confidence               346799999999999999987 56999999999999999765431111245556555543332   2333333    


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCcC--CCCcceEeecchhhhh-c
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEYL--DVPKREIKWGGTKLEE-K  314 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~--~~~~~~~~~d~~k~~~-l  314 (341)
                        .++|+|++|+|++++.+++.+ ..++||+++ +.+|+.|+++.+.+.++.. .+....  +.......+|++|+++ |
T Consensus       244 --~~~~i~v~Dva~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~~~~~d~~k~~~~l  319 (379)
T 2c5a_A          244 --TRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKK-LPIHHIPGPEGVRGRNSDNNLIKEKL  319 (379)
T ss_dssp             --EECCEEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCC-CCEEEECCCCCCSBCEECCHHHHHHH
T ss_pred             --eEEEEEHHHHHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCC-CceeeCCCCCCcccccCCHHHHHHHh
Confidence              889999999999999999865 456999988 4699999999999998532 221111  1123456789999987 9


Q ss_pred             CCcccccHHHHHHHHHHHHHHc
Q 019415          315 GFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       315 g~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ||+|+++++++|+++++|+++.
T Consensus       320 G~~p~~~l~e~l~~~~~~~~~~  341 (379)
T 2c5a_A          320 GWAPNMRLKEGLRITYFWIKEQ  341 (379)
T ss_dssp             SCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999764

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=2.8e-42  Score=315.79  Aligned_cols=302  Identities=19%  Similarity=0.138  Sum_probs=226.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++|+||||||+||||++|++.|++.| ++|++++| +.....  ..+.    ...+++++.+|++|++.+.++++++|+|
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~--~~l~----~~~~v~~~~~Dl~d~~~l~~~~~~~d~V  103 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDN-LLSAEK--INVP----DHPAVRFSETSITDDALLASLQDEYDYV  103 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECC-CTTCCG--GGSC----CCTTEEEECSCTTCHHHHHHCCSCCSEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEEC-CCCCch--hhcc----CCCceEEEECCCCCHHHHHHHhhCCCEE
Confidence            45899999999999999999999999 99999999 654311  1111    1347999999999999999999999999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCCCCCCCCCCCC--CCCCCCCCC
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKEDGSAGYKDSID--ETCYTPPDH  159 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~--E~~~~~~~~  159 (341)
                      ||+|+...... ....+..+++|+.++.+++++|++. + +++|||+||.+ +|+...      ..+++  |+++..+  
T Consensus       104 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~-vyg~~~------~~~~~~~E~~~~~~--  173 (377)
T 2q1s_A          104 FHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGC-SIAEKT------FDDAKATEETDIVS--  173 (377)
T ss_dssp             EECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC---------------------CCCCCCC--
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHH-HcCCCC------CCCcCccccccccc--
Confidence            99999865432 2335688999999999999999998 7 89999999998 454332      34666  7653101  


Q ss_pred             CCccCc-chhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCC---------CCCCCCCchhhhhHhhHhcCcc-
Q 019415          160 PLTCHN-EYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTN---------LPYSSTPVSVIGGLCQLTNNEY-  227 (341)
Q Consensus       160 ~~~~~~-~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~---------~~~~~~~~~~~~~~~~~~~~~~-  227 (341)
                           . .+.+.|+.+|..+|.+++.++ +.+++++++||+.|||+..         ........++..++..+..+.. 
T Consensus       174 -----~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  248 (377)
T 2q1s_A          174 -----LHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPL  248 (377)
T ss_dssp             -----SSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCC
T ss_pred             -----ccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCe
Confidence                 1 235789999999999999987 5699999999999999976         2200002345666666555442 


Q ss_pred             -ccccccchhhccCCCCcccHHHHHHH-HHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcC---CCCc
Q 019415          228 -VYQTLRDTEEILGKLPLVHIDDVCEA-HIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYL---DVPK  301 (341)
Q Consensus       228 -~~~~~~~~~~~~~~~~~i~v~D~a~~-~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~  301 (341)
                       .++.+.      +.++|+|++|+|++ ++.+++++. .|+||++++ .+|+.|+++.+++.++.. .+....   +...
T Consensus       249 ~~~g~g~------~~~~~i~v~Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~  320 (377)
T 2q1s_A          249 PLENGGV------ATRDFIFVEDVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITGNN-TELDRLPKRPWDN  320 (377)
T ss_dssp             CCSGGGC------CEECCEEHHHHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHTCC-SCCCCCCCCGGGC
T ss_pred             EEeCCCC------eEEeeEEHHHHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhCCC-CCceeCCCCcccc
Confidence             233333      38999999999999 999998765 459999884 699999999999988532 222111   2233


Q ss_pred             c-eEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          302 R-EIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       302 ~-~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      . ...+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       321 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  357 (377)
T 2q1s_A          321 SGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN  357 (377)
T ss_dssp             C-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred             ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence            4 67899999977 99999989999999999999864

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=5.3e-42  Score=310.62  Aligned_cols=309  Identities=17%  Similarity=0.139  Sum_probs=231.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-------hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-------KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      +|+||||||+||||++|++.|++.|++|++++| +...       ......+....  ..+++++.+|+++++.+.++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~   78 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN-FHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFK   78 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC-SSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEec-CCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHH
Confidence            479999999999999999999999999999998 6432       12222222211  1368899999999999999998


Q ss_pred             --CCCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYT  155 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~  155 (341)
                        ++|+|||+|+...... ....+..+++|+.++.+++++|++.+ +++|||+||.++ |+...      ..+++|+++.
T Consensus        79 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~-~g~~~------~~~~~E~~~~  150 (348)
T 1ek6_A           79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATV-YGNPQ------YLPLDEAHPT  150 (348)
T ss_dssp             HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGG-GCSCS------SSSBCTTSCC
T ss_pred             hcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHH-hCCCC------CCCcCCCCCC
Confidence              8999999999765432 23345889999999999999999988 899999999884 54333      4678887632


Q ss_pred             CCCCCCccCcch-hhhHHHhHHHHHHHHHhhc-c-CCceEEEEecCceeCCCCCCC------CCCCchhhhhHhhHh-cC
Q 019415          156 PPDHPLTCHNEY-LRVYIESKMKSEKELLSYG-S-SGLEVVALALGVVAGDTNLPY------SSTPVSVIGGLCQLT-NN  225 (341)
Q Consensus       156 ~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~-~-~~~~~~vlRp~~v~G~~~~~~------~~~~~~~~~~~~~~~-~~  225 (341)
                                .+ .+.|+.+|..+|.+++.++ + .+++++++||+++||+.....      .....++..+...+. ..
T Consensus       151 ----------~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~  220 (348)
T 1ek6_A          151 ----------GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRR  220 (348)
T ss_dssp             ----------CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSS
T ss_pred             ----------CCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcC
Confidence                      22 5789999999999999987 4 249999999999999953211      001235566666555 23


Q ss_pred             c--cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCC-ceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---
Q 019415          226 E--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMS-GRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---  296 (341)
Q Consensus       226 ~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~-g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---  296 (341)
                      .  ..+++....+++.+.++|||++|+|++++.+++++  ..+ ++||++++ .+|+.|+++.+++.++. +++...   
T Consensus       221 ~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~  299 (348)
T 1ek6_A          221 EALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK-KIPYKVVAR  299 (348)
T ss_dssp             SCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS-CCCEEEECC
T ss_pred             CCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCCC
Confidence            2  22221111123444899999999999999999764  233 49999874 59999999999998853 232221   


Q ss_pred             CCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          297 LDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       297 ~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .........+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       300 ~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~  340 (348)
T 1ek6_A          300 REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN  340 (348)
T ss_dssp             CTTCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             CCccchhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Confidence            12345578899999977 99999999999999999999876

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-42  Score=309.91  Aligned_cols=303  Identities=14%  Similarity=0.057  Sum_probs=229.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   82 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +.... ....+..+. ...+++++.+|++|++.+.+++++  +|+
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~-~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVA-RRSSD-TRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CCSSC-CCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeC-CCccc-cccchhhcc-ccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            4689999999999999999999999999999999 76431 111222221 124789999999999999999985  699


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCc-CEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTV-KRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      |||+|+...... ....+..+++|+.++.+++++|.+.+ + ++|||+||.++ |+...      ..+++|+++.     
T Consensus        90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v-~g~~~------~~~~~E~~~~-----  156 (335)
T 1rpn_A           90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEM-FGLIQ------AERQDENTPF-----  156 (335)
T ss_dssp             EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGG-GCSCS------SSSBCTTSCC-----
T ss_pred             EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHH-hCCCC------CCCCCcccCC-----
Confidence            999999765432 23356889999999999999999987 6 89999999884 44333      3577887633     


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-c--ccccccchh
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-Y--VYQTLRDTE  236 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~  236 (341)
                           .+.+.|+.+|..+|.+++.++ +.+++++++||+.+||++..... ....+..++..+..+. .  .++.+.+  
T Consensus       157 -----~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~-~~~~~~~~~~~~~~g~~~~~~~g~g~~--  228 (335)
T 1rpn_A          157 -----YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEF-VTRKVTDAVARIKLGKQQELRLGNVDA--  228 (335)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHTTSCSCEEESCTTC--
T ss_pred             -----CCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCc-chHHHHHHHHHHHcCCCceEEeCCCcc--
Confidence                 236789999999999999987 56999999999999999754330 0112333343333333 2  2333333  


Q ss_pred             hccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCc---cccC---cCCCCcceEeecch
Q 019415          237 EILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFH---IKQE---YLDVPKREIKWGGT  309 (341)
Q Consensus       237 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~---~~~~---~~~~~~~~~~~d~~  309 (341)
                          .++|+|++|+|+++..+++++. .++||++++ .+|+.|+++.+.+.++...   ++..   ..+.......+|++
T Consensus       229 ----~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~  303 (335)
T 1rpn_A          229 ----KRDWGFAGDYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPA  303 (335)
T ss_dssp             ----EEECEEHHHHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTH
T ss_pred             ----eeceEEHHHHHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHH
Confidence                8999999999999999998754 479999885 5999999999999986421   1111   11234456778999


Q ss_pred             hhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          310 KLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       310 k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |+++ |||+|+++++++|+++++|+++.
T Consensus       304 k~~~~lG~~p~~~l~e~l~~~~~~~~~~  331 (335)
T 1rpn_A          304 KAQRVLGWKPRTSLDELIRMMVEADLRR  331 (335)
T ss_dssp             HHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence            9987 99999999999999999999764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=1e-42  Score=310.97  Aligned_cols=291  Identities=15%  Similarity=0.071  Sum_probs=224.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   82 (341)
                      ++|+|||||||||||++|++.|+++|+      + ....             ...++++.+|++|++.+.+++++  +|+
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~-~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~~~d~   64 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG------L-PGED-------------WVFVSSKDADLTDTAQTRALFEKVQPTH   64 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC------C-TTCE-------------EEECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC------c-cccc-------------ccccCceecccCCHHHHHHHHhhcCCCE
Confidence            568999999999999999999999998      3 2111             01445568999999999999986  999


Q ss_pred             EEEeccCCccc--cchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHI--DGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        83 Vi~~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      |||+|+.....  ........+++|+.++.+++++|++.+ +++|||+||.+ +|+...      ..+++|+++....  
T Consensus        65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~-vyg~~~------~~~~~E~~~~~~~--  134 (319)
T 4b8w_A           65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTC-IFPDKT------TYPIDETMIHNGP--  134 (319)
T ss_dssp             EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGG-GSCSSC------CSSBCGGGGGBSC--
T ss_pred             EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchh-hcCCCC------CCCccccccccCC--
Confidence            99999986532  133345889999999999999999998 99999999998 554433      5678887632110  


Q ss_pred             CccCcchh-hhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhh----HhcCc--cccccc
Q 019415          161 LTCHNEYL-RVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ----LTNNE--YVYQTL  232 (341)
Q Consensus       161 ~~~~~~~~-~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~  232 (341)
                          ..+. .+|+.+|..+|++++.++ +.+++++++||+++||++.........+++.++..    +..+.  ..++++
T Consensus       135 ----~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  210 (319)
T 4b8w_A          135 ----PHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTG  210 (319)
T ss_dssp             ----CCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCS
T ss_pred             ----CCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCC
Confidence                1223 369999999999999988 56999999999999999876532233455555555    44444  233444


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCCCC--CceEEEec-cccCHHHHHHHHHHhCCCCccccCc---CCCCcceEee
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKPSM--SGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKW  306 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~  306 (341)
                      .+      .++|+|++|+|+++..+++++..  .++||+++ +.+|+.|+++.+.+.++. +.+..+   .+.......+
T Consensus       211 ~~------~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~  283 (319)
T 4b8w_A          211 NP------RRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDF-HGEVTFDTTKSDGQFKKTA  283 (319)
T ss_dssp             CC------EECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTC-CSCEEEETTSCCCCSCCCB
T ss_pred             Ce------eEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCC-CCcEEeCCCCCcCcccccC
Confidence            44      89999999999999999987433  34899987 569999999999999953 222221   1234456689


Q ss_pred             cchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          307 GGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       307 d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |++|+++ |||.|.++++++|+++++|+++.
T Consensus       284 d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~  314 (319)
T 4b8w_A          284 SNSKLRTYLPDFRFTPFKQAVKETCAWFTDN  314 (319)
T ss_dssp             CCHHHHHHCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999988 99999999999999999999876

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=1.2e-42  Score=306.39  Aligned_cols=272  Identities=13%  Similarity=0.096  Sum_probs=216.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-CCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-CDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~Vi   84 (341)
                      +|+||||| +||||++|++.|+++|++|++++| +...            ...+++++.+|++|++.+.+++++ +|+||
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r-~~~~------------~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi   68 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRR-SAQP------------MPAGVQTLIADVTRPDTLASIVHLRPEILV   68 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEEC-TTSC------------CCTTCCEEECCTTCGGGCTTGGGGCCSEEE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-Cccc------------cccCCceEEccCCChHHHHHhhcCCCCEEE
Confidence            47999999 599999999999999999999999 7543            125789999999999999999987 99999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      |+|+....    ..+..+++|+.++.+++++|++.+ +++|||+||.+ +|+...      ..+++|+++.         
T Consensus        69 h~a~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~-vyg~~~------~~~~~E~~~~---------  127 (286)
T 3gpi_A           69 YCVAASEY----SDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTG-VYGQEV------EEWLDEDTPP---------  127 (286)
T ss_dssp             ECHHHHHH----C-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGG-GCCCCC------SSEECTTSCC---------
T ss_pred             EeCCCCCC----CHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccE-EEcCCC------CCCCCCCCCC---------
Confidence            99997432    234788999999999999999988 99999999998 554433      4677888733         


Q ss_pred             cchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCc
Q 019415          165 NEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL  244 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (341)
                       .|.+.|+.+|..+|++ +.+    ++++++||+++||++..          .++..+.. ....+.+.      ..++|
T Consensus       128 -~p~~~Y~~sK~~~E~~-~~~----~~~~ilR~~~v~G~~~~----------~~~~~~~~-~~~~~~~~------~~~~~  184 (286)
T 3gpi_A          128 -IAKDFSGKRMLEAEAL-LAA----YSSTILRFSGIYGPGRL----------RMIRQAQT-PEQWPARN------AWTNR  184 (286)
T ss_dssp             -CCCSHHHHHHHHHHHH-GGG----SSEEEEEECEEEBTTBC----------HHHHHTTC-GGGSCSSB------CEECE
T ss_pred             -CCCChhhHHHHHHHHH-Hhc----CCeEEEecccccCCCch----------hHHHHHHh-cccCCCcC------ceeEE
Confidence             3468999999999999 654    89999999999998643          12233333 32223333      38899


Q ss_pred             ccHHHHHHHHHHhhcC---CCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcCCCCcceEeecchhhhhcCCcccc
Q 019415          245 VHIDDVCEAHIFCMEK---PSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNY  320 (341)
Q Consensus       245 i~v~D~a~~~~~~~~~---~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~~~  320 (341)
                      +|++|+|+++..++++   ....++||++++ .+|+.|+++.+++.++. +.+....+.......+|++|+++|||+|++
T Consensus       185 i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~  263 (286)
T 3gpi_A          185 IHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGI-AYPAGATPPVQGNKKLSNARLLASGYQLIY  263 (286)
T ss_dssp             EEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTC-CCCCSCCCCBCSSCEECCHHHHHTTCCCSS
T ss_pred             EEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCC-CCCCCCCcccCCCeEeeHHHHHHcCCCCcC
Confidence            9999999999999987   345669999874 59999999999999953 333333345667788999999889999999


Q ss_pred             -cHHHHHHHHHHHHHHc
Q 019415          321 -DLKMILDDSIKCGRKS  336 (341)
Q Consensus       321 -~~~~~l~~~~~~~~~~  336 (341)
                       +++++|+++++|+...
T Consensus       264 ~~l~e~l~~~~~~~~~~  280 (286)
T 3gpi_A          264 PDYVSGYGALLAAMREG  280 (286)
T ss_dssp             CSHHHHHHHHHHHHTC-
T ss_pred             CcHHHHHHHHHHHHhcc
Confidence             5999999999998653

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.1e-41  Score=313.94  Aligned_cols=318  Identities=18%  Similarity=0.168  Sum_probs=230.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHH-HCCCeEEEEecCCCCch---------hhhhH-hhhCCCC--CCc---eEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLL-DKGYIVHTTLRPNLEDK---------SKVDL-LKSLPGA--ETR---LIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~---------~~~~~-~~~~~~~--~~~---~~~~~~Dl~   68 (341)
                      ++|+||||||+||||++|++.|+ +.|++|++++| +....         ..+.. +..+...  ..+   ++++.+|++
T Consensus         1 s~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   79 (397)
T 1gy8_A            1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDS-LVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (397)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEEC-CTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEec-CCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence            35899999999999999999999 99999999999 65431         11111 1222111  124   889999999


Q ss_pred             ChHHHHHHhc--C-CCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCC-CC
Q 019415           69 DPDTFENAIQ--G-CDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDG-SA  143 (341)
Q Consensus        69 ~~~~~~~~~~--~-~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~-~~  143 (341)
                      |++.+.++++  + +|+|||+|+...... ...++..+++|+.++.+++++|++.+ +++|||+||.++ |+..... ..
T Consensus        80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v-~g~~~~~~~~  157 (397)
T 1gy8_A           80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAI-FGNPTMGSVS  157 (397)
T ss_dssp             CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGG-TBSCCC----
T ss_pred             CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHH-hCCCCccccc
Confidence            9999999997  6 999999999875432 23456889999999999999999988 899999999884 4332200 00


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCC-----CCCCchhhh
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPY-----SSTPVSVIG  217 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~-----~~~~~~~~~  217 (341)
                      ....+++|+++.          .+.+.|+.+|.++|.+++.++ +.+++++++||++|||+.....     .....++..
T Consensus       158 ~~~~~~~E~~~~----------~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~  227 (397)
T 1gy8_A          158 TNAEPIDINAKK----------SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPI  227 (397)
T ss_dssp             -CCCCBCTTSCC----------BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHH
T ss_pred             ccccCcCccCCC----------CCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHH
Confidence            002467777632          346899999999999999988 5699999999999999974311     001234554


Q ss_pred             hH-----hhHhcCc-------------cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-C-----C---ceEEEe
Q 019415          218 GL-----CQLTNNE-------------YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-M-----S---GRFFCT  270 (341)
Q Consensus       218 ~~-----~~~~~~~-------------~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~-----~---g~~n~~  270 (341)
                      ++     +...+..             ..+++....+++.+.++|||++|+|++++.+++.+. .     .   ++||++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~  307 (397)
T 1gy8_A          228 ILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLG  307 (397)
T ss_dssp             HHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEES
T ss_pred             HHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeC
Confidence            44     2222221             112211111234458999999999999999987532 1     3   699998


Q ss_pred             c-cccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhhhh-cCCcccc-cHHHHHHHHHHHHHHc
Q 019415          271 N-VFVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKLEE-KGFEYNY-DLKMILDDSIKCGRKS  336 (341)
Q Consensus       271 ~-~~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~-lg~~~~~-~~~~~l~~~~~~~~~~  336 (341)
                      + ..+|+.|+++.+.+.++. +++...   .........+|++|+++ |||+|++ +++++|+++++|+++.
T Consensus       308 ~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~  378 (397)
T 1gy8_A          308 TSRGYSVREVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (397)
T ss_dssp             CSCCEEHHHHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             CCCcccHHHHHHHHHHHhCC-CCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence            7 469999999999998853 233221   12345678899999987 9999999 8999999999999877

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=1.8e-41  Score=306.60  Aligned_cols=307  Identities=18%  Similarity=0.174  Sum_probs=228.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHhcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAIQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~Vi   84 (341)
                      |+||||||+||||++|++.|++. |++|++++| +....   ..+..    ..+++++.+|+++ .+.+.++++++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r-~~~~~---~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~d~vi   72 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAI---SRFLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVL   72 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEES-CCGGG---GGGTT----CTTEEEEECCTTTCSHHHHHHHHHCSEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeC-CcchH---HHhhc----CCCeEEEeccccCcHHHHHhhccCCCEEE
Confidence            68999999999999999999998 899999999 75431   11111    2478999999998 467888899999999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... ....+..+++|+.++.+++++|.+.+  ++|||+||.++ |+...      ..+++|+++.....+   
T Consensus        73 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v-~g~~~------~~~~~e~~~~~~~~~---  140 (345)
T 2bll_A           73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEV-YGMCS------DKYFDEDHSNLIVGP---  140 (345)
T ss_dssp             ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGG-GBTCC------CSSBCTTTCCCBCCC---
T ss_pred             EcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHH-cCCCC------CCCcCCcccccccCc---
Confidence            9999765432 23345789999999999999999987  89999999984 44333      356777764321100   


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCC----CCCchhhhhHhhHhcCcc--ccccccchh
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYS----STPVSVIGGLCQLTNNEY--VYQTLRDTE  236 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~  236 (341)
                      ...+.+.|+.+|..+|.+++.++ +.+++++++||+.+||++.....    ....++..++..+..+..  .++.+.+  
T Consensus       141 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--  218 (345)
T 2bll_A          141 VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ--  218 (345)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCC--
T ss_pred             ccCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCE--
Confidence            11356799999999999999987 56999999999999999864310    012234555555444432  2333333  


Q ss_pred             hccCCCCcccHHHHHHHHHHhhcCCC--C-CceEEEecc--ccCHHHHHHHHHHhCCCCc----cccCcC----------
Q 019415          237 EILGKLPLVHIDDVCEAHIFCMEKPS--M-SGRFFCTNV--FVSSAEIASCLQQNYPEFH----IKQEYL----------  297 (341)
Q Consensus       237 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~-~g~~n~~~~--~~s~~e~~~~i~~~~~~~~----~~~~~~----------  297 (341)
                          .++|+|++|+|+++..+++++.  . +++||++++  .+|+.|+++.+++.++...    .|....          
T Consensus       219 ----~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  294 (345)
T 2bll_A          219 ----KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYY  294 (345)
T ss_dssp             ----EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------
T ss_pred             ----EEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhc
Confidence                8899999999999999998753  3 349999985  5899999999999874321    111100          


Q ss_pred             ---CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcCCC
Q 019415          298 ---DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSGYL  339 (341)
Q Consensus       298 ---~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~~  339 (341)
                         ........+|++|+++ |||+|+++++++|+++++|+++..-+
T Consensus       295 ~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~~  340 (345)
T 2bll_A          295 GKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL  340 (345)
T ss_dssp             ------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred             cccccchhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCCC
Confidence               0122456789999987 99999989999999999999876543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=2.1e-42  Score=309.58  Aligned_cols=290  Identities=14%  Similarity=0.082  Sum_probs=222.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch-hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK-SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++|+|||||||||||++|++.|++.|++|++++| +.... .....+.... ...+++++.+|++          ++|+|
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~----------~~d~v   73 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDD-LRVPPMIPPEGTGKFL-EKPVLELEERDLS----------DVRLV   73 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECC-CSSCCSSCCTTSSEEE-CSCGGGCCHHHHT----------TEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEec-CCcccccchhhhhhhc-cCCCeeEEeCccc----------cCCEE
Confidence            4689999999999999999999999999999999 65410 0011111100 0124555666654          88999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+|+...... .......++ |+.++.+++++|++.+ +++|||+||.++ |+...      ..+++|+++.       
T Consensus        74 i~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v-~~~~~------~~~~~E~~~~-------  137 (321)
T 3vps_A           74 YHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEV-YGQAD------TLPTPEDSPL-------  137 (321)
T ss_dssp             EECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGG-GCSCS------SSSBCTTSCC-------
T ss_pred             EECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHH-hCCCC------CCCCCCCCCC-------
Confidence            99999876432 222335667 9999999999999999 999999999994 54433      4678888633       


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCc-eEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGL-EVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEI  238 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~-~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  238 (341)
                         .+.+.|+.+|..+|.+++.++ ++++ +++++||+.+||++....    .++..++..+..+.  ..++++.+    
T Consensus       138 ---~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----  206 (321)
T 3vps_A          138 ---SPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD----ALVPRLCANLLTRNELPVEGDGEQ----  206 (321)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT----SHHHHHHHHHHHHSEEEEETTSCC----
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC----ChHHHHHHHHHcCCCeEEeCCCCc----
Confidence               346899999999999999998 6799 999999999999986653    35666666555444  33344443    


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccC---cCCCCcceEeecchhhhh-
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQE---YLDVPKREIKWGGTKLEE-  313 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~---~~~~~~~~~~~d~~k~~~-  313 (341)
                        .++|+|++|+|+++..++.++.. |+||++++ .+|+.|+++.++ .++.. .+..   ..+.......+|++|+++ 
T Consensus       207 --~~~~v~v~Dva~~~~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~-~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~~~  281 (321)
T 3vps_A          207 --RRDFTYITDVVDKLVALANRPLP-SVVNFGSGQSLSVNDVIRILQ-ATSPA-AEVARKQPRPNEITEFRADTALQTRQ  281 (321)
T ss_dssp             --EECEEEHHHHHHHHHHGGGSCCC-SEEEESCSCCEEHHHHHHHHH-TTCTT-CEEEEECCCTTCCSBCCBCCHHHHHH
T ss_pred             --eEceEEHHHHHHHHHHHHhcCCC-CeEEecCCCcccHHHHHHHHH-HhCCC-CccccCCCCCCCcceeeccHHHHHHH
Confidence              89999999999999999998766 49999875 599999999999 87532 2221   224466788999999988 


Q ss_pred             cCCcc-cccHHHHHHHHHHHHHHcCC
Q 019415          314 KGFEY-NYDLKMILDDSIKCGRKSGY  338 (341)
Q Consensus       314 lg~~~-~~~~~~~l~~~~~~~~~~~~  338 (341)
                      |||+| .++++++|+++++|+++.+.
T Consensus       282 lG~~p~~~~~~~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          282 IGERSGGIGIEEGIRLTLEWWQSRDL  307 (321)
T ss_dssp             HCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred             hCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence            99999 77999999999999998864

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-41  Score=308.09  Aligned_cols=306  Identities=16%  Similarity=0.104  Sum_probs=225.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh--hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS--KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d   81 (341)
                      ||+||||||+||||++|++.|++.|++|++++| +.....  ....+..    ..+++++.+|++|++.+.+++++  +|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~d   75 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDN-LSRKGATDNLHWLSS----LGNFEFVHGDIRNKNDVTRLITKYMPD   75 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CCSTTHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeC-CCccCchhhhhhhcc----CCceEEEEcCCCCHHHHHHHHhccCCC
Confidence            368999999999999999999999999999998 643211  1222222    13688999999999999999987  99


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcC-EEEEecccccccCCCCCCC----------CCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVK-RLIYTASVLCASPLKEDGS----------AGYKDSI  149 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~I~~Ss~~~~~~~~~~~~----------~~~~~~~  149 (341)
                      +|||+|+...... ...++..+++|+.++.+++++|.+.+ ++ +|||+||.++++ ......          .....++
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g-~~~~~~~~e~~~~~~~~~~~~~~  153 (347)
T 1orr_A           76 SCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYG-DLEQYKYNETETRYTCVDKPNGY  153 (347)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGT-TCTTSCEEECSSCEEETTCTTCB
T ss_pred             EEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhC-CCCcCCcccccccccccccccCc
Confidence            9999999765422 23456889999999999999999998 75 999999998544 322000          0000123


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--  226 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--  226 (341)
                      +|++.          ..+.+.|+.+|..+|.+++.++ +.|++++++||+.|||+...... ...++..++..+..+.  
T Consensus       154 ~e~~~----------~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~  222 (347)
T 1orr_A          154 DESTQ----------LDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY-DQGWVGWFCQKAVEIKNG  222 (347)
T ss_dssp             CTTSC----------CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT-TBCHHHHHHHHHHHHHTT
T ss_pred             cccCC----------CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCC-cCcHHHHHHHHHHhCccc
Confidence            34331          2346899999999999999987 56999999999999999764320 1123444444332221  


Q ss_pred             -----cccccccchhhccCCCCcccHHHHHHHHHHhhcC-CCCCc-eEEEeccc---cCHHHHHHHHHHhCCCCccccC-
Q 019415          227 -----YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK-PSMSG-RFFCTNVF---VSSAEIASCLQQNYPEFHIKQE-  295 (341)
Q Consensus       227 -----~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~g-~~n~~~~~---~s~~e~~~~i~~~~~~~~~~~~-  295 (341)
                           ..++++      .+.++|+|++|+|++++.+++. ....| +||++++.   +|+.|+++.+.+.++.. .+.. 
T Consensus       223 ~~~~~~~~g~g------~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~-~~~~~  295 (347)
T 1orr_A          223 INKPFTISGNG------KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNID-MRFTN  295 (347)
T ss_dssp             CCCCEEEESSS------CCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCC-CCEEE
T ss_pred             CCCCeEEecCC------cceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCC-CCcee
Confidence                 123333      3489999999999999999975 23345 99998853   89999999999988532 1111 


Q ss_pred             --cCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          296 --YLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       296 --~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                        ..+.......+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       296 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  339 (347)
T 1orr_A          296 LPVRESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSI  339 (347)
T ss_dssp             ECCCSSCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHH
Confidence              122344567899999987 99999889999999999999875

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1.4e-41  Score=309.30  Aligned_cols=305  Identities=13%  Similarity=0.099  Sum_probs=227.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      ||||||||+||||++|++.|++. |++|++++| +... ...+.+..+.. ..+++++.+|++|++.+.++++  ++|+|
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r-~~~~-~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   77 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDK-LTYA-GNLESLSDISE-SNRYNFEHADICDSAEITRIFEQYQPDAV   77 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC-CCTT-CCGGGGTTTTT-CTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEec-CCCC-Cchhhhhhhhc-CCCeEEEECCCCCHHHHHHHHhhcCCCEE
Confidence            58999999999999999999998 799999999 6421 11122222211 3478999999999999999998  89999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhc--CCcC-------EEEEecccccccCCCCCC----CCCCCCCC
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKS--GTVK-------RLIYTASVLCASPLKEDG----SAGYKDSI  149 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~-------~~I~~Ss~~~~~~~~~~~----~~~~~~~~  149 (341)
                      ||+|+...... ...++..+++|+.++.+++++|.+.  + ++       +|||+||.++++ .....    ......++
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g-~~~~~~~~~~~~~~~~~  155 (361)
T 1kew_A           78 MHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYG-DLPHPDEVENSVTLPLF  155 (361)
T ss_dssp             EECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGC-CCCCGGGSCTTSCCCCB
T ss_pred             EECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhC-CCcccccccccccCCCC
Confidence            99999865322 2335588999999999999999998  7 77       999999998443 22100    00000156


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--  226 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--  226 (341)
                      +|+++.          .+.+.|+.+|..+|.+++.++ +.+++++++||+.|||+.....    .++..++..+..+.  
T Consensus       156 ~E~~~~----------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~  221 (361)
T 1kew_A          156 TETTAY----------APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE----KLIPLVILNALEGKPL  221 (361)
T ss_dssp             CTTSCC----------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT----SHHHHHHHHHHHTCCE
T ss_pred             CCCCCC----------CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc----cHHHHHHHHHHcCCCc
Confidence            676532          336899999999999999987 5699999999999999976432    24555555544443  


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCcc---c----cCc--
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHI---K----QEY--  296 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~---~----~~~--  296 (341)
                      ..++.+.+      .++++|++|+|++++.+++.+..+++||++++ .+|+.|+++.+++.++....   |    ..+  
T Consensus       222 ~~~~~~~~------~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~  295 (361)
T 1kew_A          222 PIYGKGDQ------IRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVA  295 (361)
T ss_dssp             EEETTSCC------EEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEEC
T ss_pred             eEcCCCce------eEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecC
Confidence            22333333      78999999999999999976544459999985 59999999999987632100   0    001  


Q ss_pred             -CCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          297 -LDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       297 -~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                       .+.......+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       296 ~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          296 DRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             CCTTCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             CCCcccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence             12223456789999988 99999989999999999999765

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=1.4e-41  Score=304.38  Aligned_cols=288  Identities=16%  Similarity=0.127  Sum_probs=223.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      +|+||||||+||||++|++.|++.|++|+++.| +.                      .+|++|++.+.++++  ++|+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r-~~----------------------~~D~~d~~~~~~~~~~~~~d~v   59 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT-RD----------------------ELNLLDSRAVHDFFASERIDQV   59 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCC-TT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEec-Cc----------------------cCCccCHHHHHHHHHhcCCCEE
Confidence            479999999999999999999999999999877 31                      379999999999998  99999


Q ss_pred             EEeccCCccc--cchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHI--DGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        84 i~~a~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      ||+|+.....  .....+..+++|+.++.+++++|.+.+ +++|||+||.++ |+...      ..+++|+++...    
T Consensus        60 ih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~v-yg~~~------~~~~~E~~~~~~----  127 (321)
T 1e6u_A           60 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCI-YPKLA------KQPMAESELLQG----  127 (321)
T ss_dssp             EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGG-SCTTC------CSSBCGGGTTSS----
T ss_pred             EEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHH-cCCCC------CCCcCccccccC----
Confidence            9999986531  123345889999999999999999998 899999999984 44333      457777764221    


Q ss_pred             ccCcch-hhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc----C-c--cccccc
Q 019415          162 TCHNEY-LRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN----N-E--YVYQTL  232 (341)
Q Consensus       162 ~~~~~~-~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~----~-~--~~~~~~  232 (341)
                        ...| .+.|+.+|..+|.+++.++ +.+++++++||+.+||++.........++..++..+..    + .  ..++.+
T Consensus       128 --~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g  205 (321)
T 1e6u_A          128 --TLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG  205 (321)
T ss_dssp             --CCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS
T ss_pred             --CCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCC
Confidence              0123 3699999999999999987 56999999999999999876431122345556555432    1 2  223443


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCCCC---------CceEEEecc-ccCHHHHHHHHHHhCCCC-cccc-CcCCCC
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKPSM---------SGRFFCTNV-FVSSAEIASCLQQNYPEF-HIKQ-EYLDVP  300 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---------~g~~n~~~~-~~s~~e~~~~i~~~~~~~-~~~~-~~~~~~  300 (341)
                      .+      .++|||++|+|++++.+++++..         .++||++++ .+|+.|+++.+.+.++.. ++.. ...+..
T Consensus       206 ~~------~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~  279 (321)
T 1e6u_A          206 TP------MREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDG  279 (321)
T ss_dssp             CC------EECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCC
T ss_pred             CE------EEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCC
Confidence            33      89999999999999999987654         369999874 699999999999998532 1111 111234


Q ss_pred             cceEeecchhhhhcCCcccccHHHHHHHHHHHHHHc
Q 019415          301 KREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       301 ~~~~~~d~~k~~~lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .....+|++|+++|||+|+++++++|+++++|+++.
T Consensus       280 ~~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~~~  315 (321)
T 1e6u_A          280 TPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN  315 (321)
T ss_dssp             CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             cccccCCHHHHHhcCCccCCcHHHHHHHHHHHHHHH
Confidence            556789999997799999989999999999999875

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=7.8e-42  Score=301.35  Aligned_cols=270  Identities=13%  Similarity=0.039  Sum_probs=219.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      |+||||||+||||++|++.|+++|++|++++| .                       ++|++|++.+.++++  ++|+||
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~-----------------------~~D~~d~~~~~~~~~~~~~d~vi   61 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDK-K-----------------------LLDITNISQVQQVVQEIRPHIII   61 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECT-T-----------------------TSCTTCHHHHHHHHHHHCCSEEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecc-c-----------------------ccCCCCHHHHHHHHHhcCCCEEE
Confidence            59999999999999999999999999999988 2                       378999999999998  699999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... ...++..+++|+.++.+++++|++.+ + +|||+||.++ |+...      ..+++|+++.        
T Consensus        62 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~v-y~~~~------~~~~~E~~~~--------  124 (287)
T 3sc6_A           62 HCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYV-FQGDR------PEGYDEFHNP--------  124 (287)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGG-SCCCC------SSCBCTTSCC--------
T ss_pred             ECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhh-cCCCC------CCCCCCCCCC--------
Confidence            9999876543 23456899999999999999999998 6 7999999984 54333      4678888733        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                        .|.+.|+.+|..+|++++.+.   .+++++||+.+||+....      ++..++..+..+......+++      .++
T Consensus       125 --~p~~~Y~~sK~~~E~~~~~~~---~~~~ilR~~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~  187 (287)
T 3sc6_A          125 --APINIYGASKYAGEQFVKELH---NKYFIVRTSWLYGKYGNN------FVKTMIRLGKEREEISVVADQ------IGS  187 (287)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHC---SSEEEEEECSEECSSSCC------HHHHHHHHHTTCSEEEEECSC------EEC
T ss_pred             --CCCCHHHHHHHHHHHHHHHhC---CCcEEEeeeeecCCCCCc------HHHHHHHHHHcCCCeEeecCc------ccC
Confidence              346899999999999999876   378999999999986432      466677666655533222223      889


Q ss_pred             cccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCc----ccc---CcCCCCcceEeecchhhhhcC
Q 019415          244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFH----IKQ---EYLDVPKREIKWGGTKLEEKG  315 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~----~~~---~~~~~~~~~~~~d~~k~~~lg  315 (341)
                      ++|++|+|+++..+++++. .++||++++ .+|+.|+++.+++.++...    ++.   ...........+|++|+++||
T Consensus       188 ~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg  266 (287)
T 3sc6_A          188 PTYVADLNVMINKLIHTSL-YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLRLNG  266 (287)
T ss_dssp             CEEHHHHHHHHHHHHTSCC-CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHHHTT
T ss_pred             ceEHHHHHHHHHHHHhCCC-CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHHhhC
Confidence            9999999999999999876 779999885 5999999999999985321    111   112334566789999999999


Q ss_pred             CcccccHHHHHHHHHHHHHH
Q 019415          316 FEYNYDLKMILDDSIKCGRK  335 (341)
Q Consensus       316 ~~~~~~~~~~l~~~~~~~~~  335 (341)
                      |.|.++++++|+++++|+++
T Consensus       267 ~~p~~~~~~~l~~~~~~~~~  286 (287)
T 3sc6_A          267 FLQMPSWEEGLERFFIETKS  286 (287)
T ss_dssp             CCCCCBHHHHHHHHHHHTC-
T ss_pred             CCCCccHHHHHHHHHHHHhc
Confidence            99999999999999999864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=7.2e-41  Score=301.43  Aligned_cols=291  Identities=19%  Similarity=0.179  Sum_probs=223.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~   82 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +....  .+.+..+    .+++++.+|++|++.+.+++++  +|+
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~--~~~l~~~----~~~~~~~~Dl~d~~~~~~~~~~~~~D~   92 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDN-FATGR--REHLKDH----PNLTFVEGSIADHALVNQLIGDLQPDA   92 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCC--GGGSCCC----TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC-CCccc--hhhHhhc----CCceEEEEeCCCHHHHHHHHhccCCcE
Confidence            5689999999999999999999999999999999 65421  1111111    4789999999999999999987  999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCC-CCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKE-DGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~-~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |||+|+.......... . +++|+.++.+++++|.+.+ +++|||+||.++ |+... ..    ..+++|++        
T Consensus        93 vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~-~g~~~~~~----~~~~~E~~--------  156 (333)
T 2q1w_A           93 VVHTAASYKDPDDWYN-D-TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALC-YGVKPIQQ----PVRLDHPR--------  156 (333)
T ss_dssp             EEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGG-GCSCCCSS----SBCTTSCC--------
T ss_pred             EEECceecCCCccCCh-H-HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHH-hCCCcccC----CCCcCCCC--------
Confidence            9999998665222223 3 8999999999999999988 899999999884 43110 11    12677765        


Q ss_pred             ccCcchh-hhHHHhHHHHHHHHHh-hccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhcc
Q 019415          162 TCHNEYL-RVYIESKMKSEKELLS-YGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEIL  239 (341)
Q Consensus       162 ~~~~~~~-~~Y~~sK~~~E~~~~~-~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (341)
                          .+. +.|+.+|..+|.+++. +.    +++++||+++||++..     ..++..++..+..+...++ +.+     
T Consensus       157 ----~p~~~~Y~~sK~~~E~~~~~s~~----~~~ilR~~~v~gp~~~-----~~~~~~~~~~~~~~~~~~~-~~~-----  217 (333)
T 2q1w_A          157 ----NPANSSYAISKSANEDYLEYSGL----DFVTFRLANVVGPRNV-----SGPLPIFFQRLSEGKKCFV-TKA-----  217 (333)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHTC----CEEEEEESEEESTTCC-----SSHHHHHHHHHHTTCCCEE-EEC-----
T ss_pred             ----CCCCCchHHHHHHHHHHHHhhhC----CeEEEeeceEECcCCc-----CcHHHHHHHHHHcCCeeeC-CCc-----
Confidence                124 7899999999999997 64    8999999999999832     2345555555444332232 233     


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcC-------CCCcceEeecchhh
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYL-------DVPKREIKWGGTKL  311 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~d~~k~  311 (341)
                       .++++|++|+|+++..+++++. +++||++++ .+|+.|+++.+.+.++..  +..+.       ........+|++|+
T Consensus       218 -~~~~i~v~Dva~ai~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~d~~k~  293 (333)
T 2q1w_A          218 -RRDFVFVKDLARATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP--SYPEPEIRELGPDDAPSILLDPSRTI  293 (333)
T ss_dssp             -EECEEEHHHHHHHHHHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS--SCCCCEEEECCTTSCCCCCBCCHHHH
T ss_pred             -eEeeEEHHHHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC--CceeCCCCCcccccccccccCCHHHH
Confidence             7899999999999999998766 569999874 699999999999998643  22111       11225678999999


Q ss_pred             hhcCCcccccHHHHHHHHHHHHHHcCCCCC
Q 019415          312 EEKGFEYNYDLKMILDDSIKCGRKSGYLPQ  341 (341)
Q Consensus       312 ~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~  341 (341)
                      +++||+|.++++++|+++++|+++.+.+|.
T Consensus       294 ~~~G~~p~~~~~~~l~~~~~~~~~~~~~~~  323 (333)
T 2q1w_A          294 QDFGKIEFTPLKETVAAAVAYFREYGVSGG  323 (333)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHHHCC---
T ss_pred             HhcCCCcCCCHHHHHHHHHHHHHHHCCCCC
Confidence            878999998999999999999999998873

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=6.1e-41  Score=303.15  Aligned_cols=299  Identities=18%  Similarity=0.152  Sum_probs=225.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+||||||+||||++|++.|++.|++|++++| +.....  ..+.... ...++.++.+|+.++.     +.++|+||
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~--~~~~~~~-~~~~~~~~~~D~~~~~-----~~~~d~vi   96 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDN-FFTGRK--RNVEHWI-GHENFELINHDVVEPL-----YIEVDQIY   96 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCCG--GGTGGGT-TCTTEEEEECCTTSCC-----CCCCSEEE
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeC-CCccch--hhhhhhc-cCCceEEEeCccCChh-----hcCCCEEE
Confidence            4689999999999999999999999999999999 654311  1111111 1247899999998853     56899999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... ....+..+++|+.++.+++++|.+.+ + +|||+||.++ |+...      ..+++|+++.....    
T Consensus        97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v-~g~~~------~~~~~E~~~~~~~~----  163 (343)
T 2b69_A           97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEV-YGDPE------VHPQSEDYWGHVNP----  163 (343)
T ss_dssp             ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGG-GBSCS------SSSBCTTCCCBCCS----
T ss_pred             ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHH-hCCCC------CCCCcccccccCCC----
Confidence            9999765432 22345789999999999999999988 5 9999999884 44333      35677775433211    


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhccC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEILG  240 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  240 (341)
                       ..+.+.|+.+|..+|.+++.++ +.+++++++||+.+||++....  ...++..++..+..+.  ..++.+.+      
T Consensus       164 -~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------  234 (343)
T 2b69_A          164 -IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN--DGRVVSNFILQALQGEPLTVYGSGSQ------  234 (343)
T ss_dssp             -SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTT--CCCHHHHHHHHHHHTCCEEEESSSCC------
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCC--cccHHHHHHHHHHcCCCceEcCCCCe------
Confidence             1346889999999999999987 5699999999999999976542  1234555555544443  22344333      


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhhhh-cC
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKLEE-KG  315 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~-lg  315 (341)
                      .++|+|++|+|+++..+++.+ ..++||++++ .+|+.|+++.+++.++.. .+...   .........+|++|+++ ||
T Consensus       235 ~~~~v~v~Dva~a~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~~~~~~d~~k~~~~lG  312 (343)
T 2b69_A          235 TRAFQYVSDLVNGLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSG-SEIQFLSEAQDDPQKRKPDIKKAKLMLG  312 (343)
T ss_dssp             EEECEEHHHHHHHHHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCC-CCEEEECCCTTCCCCCCBCCHHHHHHHC
T ss_pred             EEeeEeHHHHHHHHHHHHhcC-CCCeEEecCCCCCcHHHHHHHHHHHhCCC-CCceeCCCCCCCCceecCCHHHHHHHcC
Confidence            889999999999999999764 3579999885 599999999999998532 11111   12234567889999987 99


Q ss_pred             CcccccHHHHHHHHHHHHHHc
Q 019415          316 FEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       316 ~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |+|+++++++|+++++|+++.
T Consensus       313 ~~p~~~l~e~l~~~~~~~~~~  333 (343)
T 2b69_A          313 WEPVVPLEEGLNKAIHYFRKE  333 (343)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHH
Confidence            999889999999999999764

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=2.4e-41  Score=302.42  Aligned_cols=292  Identities=19%  Similarity=0.211  Sum_probs=223.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      +||||||+||||++|++.|++.  |++|++++| +....             .+++++.+|++|++.+.++++  ++|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~v   66 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDI-VQRDT-------------GGIKFITLDVSNRDEIDRAVEKYSIDAI   66 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEES-SCCCC-------------TTCCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecC-CCccc-------------cCceEEEecCCCHHHHHHHHhhcCCcEE
Confidence            5999999999999999999998  899999999 65331             146789999999999999998  89999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+|+..........+..+++|+.++.+++++|++.+ +++|||+||.+++.+...      ..+.+|+++.        
T Consensus        67 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~------~~~~~e~~~~--------  131 (317)
T 3ajr_A           67 FHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETP------KNKVPSITIT--------  131 (317)
T ss_dssp             EECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSC------SSSBCSSSCC--------
T ss_pred             EECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCC------CCCccccccC--------
Confidence            9999976543233456889999999999999999998 899999999985443222      2455565422        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCC-CCchhhhhHhhHhcCc-cccccccchhhccC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSS-TPVSVIGGLCQLTNNE-YVYQTLRDTEEILG  240 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  240 (341)
                        .+.+.|+.+|..+|.+++.+. +++++++++||+.+||+....... ...+...+...+..+. ..+..+.+      
T Consensus       132 --~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  203 (317)
T 3ajr_A          132 --RPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNR------  203 (317)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTC------
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccc------
Confidence              346899999999999999887 569999999999999986432210 1123344444444443 22333333      


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCC----CceEEEeccccCHHHHHHHHHHhCCCCccccCcC--C--CCcceEeecchhhh
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSM----SGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYL--D--VPKREIKWGGTKLE  312 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~----~g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~--~--~~~~~~~~d~~k~~  312 (341)
                      .++|+|++|+|+++..+++++..    +++||++++.+|+.|+++.+.+.++...++....  .  .......+|++|++
T Consensus       204 ~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~k~~  283 (317)
T 3ajr_A          204 ALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDFRDKIAATWPESLDSSEAS  283 (317)
T ss_dssp             CEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCCEEECCCHHHHHHTTSCSCBCCHHHH
T ss_pred             eeeeeEHHHHHHHHHHHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccccccccccchhhccccccccCHHHHH
Confidence            89999999999999999987542    2599999877999999999999987433332210  0  01223568999998


Q ss_pred             h-cCCcccccHHHHHHHHHHHHHHc
Q 019415          313 E-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       313 ~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      + |||+|+++++++|+++++|+++.
T Consensus       284 ~~lG~~p~~~~~~~l~~~~~~~~~~  308 (317)
T 3ajr_A          284 NEWGFSIEYDLDRTIDDMIDHISEK  308 (317)
T ss_dssp             HHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCHHHHHHHHHHHHHhh
Confidence            7 99999999999999999999875

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=4.4e-41  Score=310.65  Aligned_cols=315  Identities=17%  Similarity=0.110  Sum_probs=225.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh--------------hhHhhhC-CCCCCceEEEecCCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK--------------VDLLKSL-PGAETRLIFFEAEIYD   69 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------------~~~~~~~-~~~~~~~~~~~~Dl~~   69 (341)
                      ++++||||||+||||++|++.|+++|++|++++| .......              .+.+... .....+++++.+|++|
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN-LVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEe-cCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            5789999999999999999999999999999988 5432111              0111100 0002478899999999


Q ss_pred             hHHHHHHhcC--CCEEEEeccCCcccc--chh--HhHhhhhhhhHHHHHHHHHHhcCCc-CEEEEecccccccCCCCCCC
Q 019415           70 PDTFENAIQG--CDFVFHVATPLQHID--GYL--YKNVVEACVGAAKKIASFCVKSGTV-KRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        70 ~~~~~~~~~~--~d~Vi~~a~~~~~~~--~~~--~~~~~~~nv~~~~~l~~~~~~~~~~-~~~I~~Ss~~~~~~~~~~~~  142 (341)
                      ++.+.+++++  +|+|||+||......  .++  +...+++|+.++.+++++|.+.+ + ++|||+||.++ |+..    
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~v-yg~~----  162 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGE-YGTP----  162 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGG-GCCC----
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHH-hCCC----
Confidence            9999999987  999999999765322  111  23578999999999999999988 6 59999999884 5332    


Q ss_pred             CCCCCCCCCCCCCCCCC----CCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCC---------
Q 019415          143 AGYKDSIDETCYTPPDH----PLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPY---------  208 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~----~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~---------  208 (341)
                         ..+++|+++.....    ..+....+.+.|+.+|..+|.+++.++ +.|++++++||+.||||+....         
T Consensus       163 ---~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~  239 (404)
T 1i24_A          163 ---NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNR  239 (404)
T ss_dssp             ---SSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCC
T ss_pred             ---CCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccc
Confidence               23455542210000    000012346889999999999999887 5699999999999999976421         


Q ss_pred             ----CCCCchhhhhHhhHhcCcc--ccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc---eEEEeccccCHHHH
Q 019415          209 ----SSTPVSVIGGLCQLTNNEY--VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG---RFFCTNVFVSSAEI  279 (341)
Q Consensus       209 ----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g---~~n~~~~~~s~~e~  279 (341)
                          ......+..++..+..+..  .++++.+      .++|||++|+|++++.+++++...|   +||++++.+|+.|+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~------~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~  313 (404)
T 1i24_A          240 LDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQ------TRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNEL  313 (404)
T ss_dssp             CCCSTTTCCHHHHHHHHHHHTCCEEEETTSCC------EEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHH
T ss_pred             cccccchhhHHHHHHHHHHcCCeeEEeCCCCc------eECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHH
Confidence                0002345566666555542  3344433      8999999999999999998765444   99998867999999


Q ss_pred             HHHHHHh---CCCCccccCcCC-----CCcceEeecchhhhhcCCcccccHHHHHHHHHHHHHHc
Q 019415          280 ASCLQQN---YPEFHIKQEYLD-----VPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       280 ~~~i~~~---~~~~~~~~~~~~-----~~~~~~~~d~~k~~~lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ++.+++.   ++. +++....+     .......+|++|+++|||+|+++++++++++++|++..
T Consensus       314 ~~~i~~~~~~~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~  377 (404)
T 1i24_A          314 ASLVTKAGSKLGL-DVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQF  377 (404)
T ss_dssp             HHHHHHHHHTTTC-CCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhCC-CccccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhh
Confidence            9999997   432 22211111     12345678999998899999989999999999998654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.1e-40  Score=300.74  Aligned_cols=309  Identities=16%  Similarity=0.128  Sum_probs=226.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      |+||||||+||||++|++.|+++|++|++++| .... ......+....  ...++++.+|+++++.+.++++  ++|+|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~v   77 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDN-LCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTV   77 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEec-CCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEE
Confidence            68999999999999999999999999999887 5332 12222222211  1367889999999999999887  59999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+||...... .......+++|+.++.++++++++.+ +++|||+||.++ |+...      ..+++|+++..      
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~-~g~~~------~~~~~e~~~~~------  143 (338)
T 1udb_A           78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATV-YGDNP------KIPYVESFPTG------  143 (338)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGG-GCSCC------SSSBCTTSCCC------
T ss_pred             EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHH-hCCCC------CCCcCcccCCC------
Confidence            99999764322 22345789999999999999999988 899999999884 44332      45677765321      


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cC-CceEEEEecCceeCCCCCCC------CCCCchhhhhHhhHhcCc---ccccc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SS-GLEVVALALGVVAGDTNLPY------SSTPVSVIGGLCQLTNNE---YVYQT  231 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~-~~~~~vlRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~  231 (341)
                         .+.+.|+.+|.++|.+++.++ +. +++++++||+++||+.....      .....++..+.....+..   ..++.
T Consensus       144 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  220 (338)
T 1udb_A          144 ---TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGN  220 (338)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECS
T ss_pred             ---CCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecC
Confidence               125789999999999999987 55 89999999999999853211      001234555555444222   11221


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCC--CCC-ceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcceE
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMS-GRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKREI  304 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~-g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~  304 (341)
                      ....+++.+.++|||++|+|++++.++++.  ... ++||++++ .+|+.|+++.+++.++. +++...   .+......
T Consensus       221 ~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~  299 (338)
T 1udb_A          221 DYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAY  299 (338)
T ss_dssp             CSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBC
T ss_pred             cccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCC-CCcceeCCCCCCchhhh
Confidence            111223445889999999999999988753  233 48999874 59999999999998743 233221   12344567


Q ss_pred             eecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          305 KWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       305 ~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .+|++|+++ |||+|+++++++|+++++|++++
T Consensus       300 ~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~  332 (338)
T 1udb_A          300 WADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             hcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhc
Confidence            889999977 99999999999999999999875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-41  Score=306.12  Aligned_cols=303  Identities=13%  Similarity=0.070  Sum_probs=225.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch--hhhhHhhhCCC--CCCceEEEecCCCChHHHHHHhcC--C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK--SKVDLLKSLPG--AETRLIFFEAEIYDPDTFENAIQG--C   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~--~   80 (341)
                      |+||||||+||||++|++.|+++|++|++++| +....  .....+.....  ...+++++.+|++|++.+.+++++  +
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVR-RSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-CccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence            68999999999999999999999999999999 65431  11222111000  124788999999999999999985  6


Q ss_pred             CEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCc---CEEEEecccccccCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTV---KRLIYTASVLCASPLKEDGSAGYKDSIDETCYTP  156 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (341)
                      |+|||+|+...... ...++..+++|+.++.+++++|.+.+ +   ++|||+||.++ |+...      ..+++|+++. 
T Consensus       104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~-~~~~~------~~~~~E~~~~-  174 (375)
T 1t2a_A          104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSEL-YGKVQ------EIPQKETTPF-  174 (375)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGG-TCSCS------SSSBCTTSCC-
T ss_pred             CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhh-hCCCC------CCCCCccCCC-
Confidence            99999999765432 23456889999999999999999988 7   79999999985 43322      3577887632 


Q ss_pred             CCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-c--ccccc
Q 019415          157 PDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-Y--VYQTL  232 (341)
Q Consensus       157 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~  232 (341)
                               .+.+.|+.+|..+|.+++.++ +.+++++++||+.+|||+..... ....+..++..+..+. .  .++.+
T Consensus       175 ---------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~-~~~~~~~~~~~~~~g~~~~~~~g~~  244 (375)
T 1t2a_A          175 ---------YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANF-VTRKISRSVAKIYLGQLECFSLGNL  244 (375)
T ss_dssp             ---------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHHTSCSCEEESCT
T ss_pred             ---------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCc-chHHHHHHHHHHHcCCCceeEeCCC
Confidence                     235789999999999999988 56999999999999999754320 0011223333333332 2  23333


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCc------cccC----------
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFH------IKQE----------  295 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~------~~~~----------  295 (341)
                      .+      .++|+|++|+|++++.+++++. .++||++++ .+|+.|+++.+++.++...      +|..          
T Consensus       245 ~~------~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~  317 (375)
T 1t2a_A          245 DA------KRDWGHAKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVH  317 (375)
T ss_dssp             TC------EECCEEHHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEE
T ss_pred             Cc------eeeeEEHHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccce
Confidence            33      8999999999999999998654 479999875 5999999999999985421      1110          


Q ss_pred             -------cCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          296 -------YLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       296 -------~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                             ..+.......+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       318 ~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  366 (375)
T 1t2a_A          318 VTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVEL  366 (375)
T ss_dssp             EEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             eecCcccCCcccchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence                   112233456789999987 99999999999999999999764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=4.5e-40  Score=295.87  Aligned_cols=291  Identities=21%  Similarity=0.205  Sum_probs=224.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +.....  ..+..+    .+++++.+|++|++.+.++++  ++|+
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~--~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDN-FATGKR--EVLPPV----AGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEEC-CSSSCG--GGSCSC----TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CCccch--hhhhcc----CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            4589999999999999999999999999999999 654311  111111    478999999999999999998  9999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |||+|+.........+ . +++|+.++.+++++|.+.+ +++|||+||.++ |+.....    ..+++|++         
T Consensus        92 vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~-~~~~~~~----~~~~~E~~---------  154 (330)
T 2pzm_A           92 VVHSAAAYKDPDDWAE-D-AATNVQGSINVAKAASKAG-VKRLLNFQTALC-YGRPATV----PIPIDSPT---------  154 (330)
T ss_dssp             EEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGG-GCSCSSS----SBCTTCCC---------
T ss_pred             EEECCccCCCccccCh-h-HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHH-hCCCccC----CCCcCCCC---------
Confidence            9999998664222223 3 8999999999999999988 899999999985 4332200    12677765         


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL  242 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (341)
                         .+.+.|+.+|..+|.+++.+   +++++++||+++|||+...     .++..++..+..+...++      ++. .+
T Consensus       155 ---~~~~~Y~~sK~~~e~~~~~~---~~~~~~iR~~~v~gp~~~~-----~~~~~~~~~~~~~~~~~~------~~~-~~  216 (330)
T 2pzm_A          155 ---APFTSYGISKTAGEAFLMMS---DVPVVSLRLANVTGPRLAI-----GPIPTFYKRLKAGQKCFC------SDT-VR  216 (330)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHTC---SSCEEEEEECEEECTTCCS-----SHHHHHHHHHHTTCCCCE------ESC-EE
T ss_pred             ---CCCChHHHHHHHHHHHHHHc---CCCEEEEeeeeeECcCCCC-----CHHHHHHHHHHcCCEEeC------CCC-Ee
Confidence               12578999999999999876   6999999999999998521     234455554443332222      122 57


Q ss_pred             CcccHHHHHH-HHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcCCC--CcceEeecchhh-----hh
Q 019415          243 PLVHIDDVCE-AHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYLDV--PKREIKWGGTKL-----EE  313 (341)
Q Consensus       243 ~~i~v~D~a~-~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~~--~~~~~~~d~~k~-----~~  313 (341)
                      +++|++|+|+ ++..+++.+. +++||++++ .+|+.|+++.+.+.++..  +..+.+.  ......+|++|+     ++
T Consensus       217 ~~i~~~Dva~~a~~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~--~~~~~~~~~~~~~~~~d~~k~~~~~l~~  293 (330)
T 2pzm_A          217 DFLDMSDFLAIADLSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT--LAEPVPVVAPGADDVPSVVLDPSKTETE  293 (330)
T ss_dssp             CEEEHHHHHHHHHHHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC--CSSCCCEECCCTTSCSEECBCCHHHHHH
T ss_pred             cceeHHHHHHHHHHHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC--CceeCCCCcchhhccCCHHHHhhchHHH
Confidence            8999999999 9999998765 569999885 699999999999988543  2222111  344567888888     77


Q ss_pred             cCCcccccHHHHHHHHHHHHHHcCCCC
Q 019415          314 KGFEYNYDLKMILDDSIKCGRKSGYLP  340 (341)
Q Consensus       314 lg~~~~~~~~~~l~~~~~~~~~~~~~~  340 (341)
                      |||+|+++++++|+++++|+++.+++.
T Consensus       294 lG~~p~~~~~~~l~~~~~~~~~~~~~~  320 (330)
T 2pzm_A          294 FGWKAKVDFKDTITGQLAWYDKYGVTD  320 (330)
T ss_dssp             HCCCCCCCHHHHHHHHHHHHHHHCSCS
T ss_pred             cCCcccCCHHHHHHHHHHHHHhhCccc
Confidence            999998899999999999999998873

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=2.1e-40  Score=299.54  Aligned_cols=302  Identities=14%  Similarity=0.024  Sum_probs=227.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~V   83 (341)
                      +|+||||||+||||++|++.|+++|++|++++| +...... ..+..+. ...+++++.+|++|++.+.+++++  +|+|
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r-~~~~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   79 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADR-RSGEFAS-WRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQPDEV   79 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS-CCSTTTT-HHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEEC-CCccccc-ccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcCCCEE
Confidence            479999999999999999999999999999999 7654221 2233221 124789999999999999999985  6999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCc-CEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTV-KRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      ||+|+...... ...++..+++|+.++.+++++|.+.+ + ++|||+||.++ |+...      ..+++|++..      
T Consensus        80 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~v-yg~~~------~~~~~e~~~~------  145 (345)
T 2z1m_A           80 YNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEM-FGKVQ------EIPQTEKTPF------  145 (345)
T ss_dssp             EECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGG-GCSCS------SSSBCTTSCC------
T ss_pred             EECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhh-cCCCC------CCCCCccCCC------
Confidence            99999765322 33456889999999999999999887 6 89999999984 54333      4567777632      


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-c--ccccccchhh
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-Y--VYQTLRDTEE  237 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~  237 (341)
                          .+.+.|+.+|..+|.+++.++ +.+++++++|+.++|||+..... ....+..++..+..+. .  ..+.+.+   
T Consensus       146 ----~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---  217 (345)
T 2z1m_A          146 ----YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEF-VTRKITYSLARIKYGLQDKLVLGNLNA---  217 (345)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHTTSCSCEEESCTTC---
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcc-hhHHHHHHHHHHHcCCCCeeeeCCCCc---
Confidence                236789999999999999988 56899999999999999754330 0011222232332332 1  2333333   


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCC-c-----ccc--------------C-
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEF-H-----IKQ--------------E-  295 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~-~-----~~~--------------~-  295 (341)
                         .++|+|++|+|+++..+++++. .++||++++ .+|+.|+++.+++.++.. +     +|.              . 
T Consensus       218 ---~~~~~~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~  293 (345)
T 2z1m_A          218 ---KRDWGYAPEYVEAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSE  293 (345)
T ss_dssp             ---EECCEEHHHHHHHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECG
T ss_pred             ---eeeeEEHHHHHHHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCc
Confidence               7899999999999999998654 479999875 599999999999998542 1     110              0 


Q ss_pred             --cCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          296 --YLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       296 --~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                        ..+.......+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       294 ~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  337 (345)
T 2z1m_A          294 EFFRPAEVDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKR  337 (345)
T ss_dssp             GGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCcceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence              112233456789999987 99999989999999999999764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.1e-40  Score=302.98  Aligned_cols=297  Identities=18%  Similarity=0.158  Sum_probs=223.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+||||++|++.|++.| ++|++++| +.... ..   ..+.    ++. +.+|+++++.+.++++     
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~-~~---~~~~----~~~-~~~d~~~~~~~~~~~~~~~~~  114 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDN-LKDGT-KF---VNLV----DLN-IADYMDKEDFLIQIMAGEEFG  114 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEEC-CSSGG-GG---GGTT----TSC-CSEEEEHHHHHHHHHTTCCCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEec-CCCcc-hh---hccc----Cce-EeeecCcHHHHHHHHhhcccC
Confidence            45899999999999999999999999 99999999 65431 11   1221    223 7789999999999987     


Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                      ++|+|||+|+..... ...++..+++|+.++.+++++|.+.+ + +|||+||.++ |+...      ..+++|+++.   
T Consensus       115 ~~d~Vih~A~~~~~~-~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v-~g~~~------~~~~~E~~~~---  181 (357)
T 2x6t_A          115 DVEAIFHEGACSSTT-EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAAT-YGGRT------SDFIESREYE---  181 (357)
T ss_dssp             SCCEEEECCSCCCTT-CCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGG-GCSCS------SCCCSSGGGC---
T ss_pred             CCCEEEECCcccCCc-cCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHH-hCCCC------CCCcCCcCCC---
Confidence            599999999987653 23355889999999999999999998 7 9999999985 44332      3467777622   


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhh
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEE  237 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (341)
                             .+.+.|+.+|..+|.+++.++ +.+++++++||+.|||++.........++..++..+..+.....    .++
T Consensus       182 -------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  250 (357)
T 2x6t_A          182 -------KPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKL----FEG  250 (357)
T ss_dssp             -------CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEE----ETT
T ss_pred             -------CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEE----eCC
Confidence                   346899999999999999998 66999999999999999765321122345556665554442211    112


Q ss_pred             ccC-CCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCcC-----CCCcceEeecchh
Q 019415          238 ILG-KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEYL-----DVPKREIKWGGTK  310 (341)
Q Consensus       238 ~~~-~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~d~~k  310 (341)
                      +.. .++|+|++|+|+++..+++++. .++||+++ ..+|+.|+++.+.+.++...++....     ........+|++|
T Consensus       251 ~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k  329 (357)
T 2x6t_A          251 SENFKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTN  329 (357)
T ss_dssp             GGGCEECEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGTTSCCSBCCCCCHH
T ss_pred             CCcceEccEEHHHHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccccccccccccCHHH
Confidence            334 6789999999999999998766 66999987 46999999999999986431211111     1123456789999


Q ss_pred             hhhcCC-cccccHHHHHHHHHHHHHHc
Q 019415          311 LEEKGF-EYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       311 ~~~lg~-~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +++||| .|.++++++|+++++|+++.
T Consensus       330 ~~~lG~~~~~~~l~e~l~~~~~~~~~~  356 (357)
T 2x6t_A          330 LRAAGYDKPFKTVAEGVTEYMAWLNRD  356 (357)
T ss_dssp             HHHTTCCCCCCCHHHHHHHHHHHHC--
T ss_pred             HHHcCCCCCCCCHHHHHHHHHHHHhhc
Confidence            988999 78889999999999999753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-40  Score=301.92  Aligned_cols=303  Identities=12%  Similarity=0.089  Sum_probs=222.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCC----CCCceEEEecCCCChHHHHHHhcC--
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPG----AETRLIFFEAEIYDPDTFENAIQG--   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~~~~~~~~--   79 (341)
                      ||+||||||+||||+++++.|+++|++|++++| +.... ....+..+..    ...+++++.+|++|++.+.+++++  
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKR-RASSF-NTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ   78 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEEC-CCccc-chHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence            478999999999999999999999999999999 65431 1111111110    124789999999999999999875  


Q ss_pred             CCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCc---CEEEEecccccccCCCCCCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTV---KRLIYTASVLCASPLKEDGSAGYKDSIDETCYT  155 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~  155 (341)
                      +|+|||+|+...... .+..+..+++|+.++.+++++|.+.+ +   ++|||+||.++ |+...      ..+++|+++.
T Consensus        79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v-~g~~~------~~~~~E~~~~  150 (372)
T 1db3_A           79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSEL-YGLVQ------EIPQKETTPF  150 (372)
T ss_dssp             CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGG-GTTCC------SSSBCTTSCC
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhh-hCCCC------CCCCCccCCC
Confidence            799999999765432 33355788999999999999999988 7   79999999985 43332      3567777633


Q ss_pred             CCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-c--cccc
Q 019415          156 PPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-Y--VYQT  231 (341)
Q Consensus       156 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~  231 (341)
                                .+.+.|+.+|..+|.+++.++ +++++++++|++.+|||+..... ....+..++..+..+. .  .+++
T Consensus       151 ----------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~-~~~~~~~~~~~~~~g~~~~~~~g~  219 (372)
T 1db3_A          151 ----------YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETF-VTRKITRAIANIAQGLESCLYLGN  219 (372)
T ss_dssp             ----------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHTTSCCCEEESC
T ss_pred             ----------CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcc-hhhHHHHHHHHHHcCCCCceeecC
Confidence                      236789999999999999988 56899999999999999754320 0112233343333332 1  2333


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCC-c-----cccC---------
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEF-H-----IKQE---------  295 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~-~-----~~~~---------  295 (341)
                      +.+      .++|+|++|+|++++.+++++. .++||++++ .+|+.|+++.+.+.++.. +     +|..         
T Consensus       220 ~~~------~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~  292 (372)
T 1db3_A          220 MDS------LRDWGHAKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGH  292 (372)
T ss_dssp             TTC------EECCEEHHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSS
T ss_pred             CCc------eeeeeEHHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccc
Confidence            333      8999999999999999998654 479999875 599999999999998531 1     1100         


Q ss_pred             ------------------cCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          296 ------------------YLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       296 ------------------~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                                        ..+.......+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  352 (372)
T 1db3_A          293 DAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEA  352 (372)
T ss_dssp             SCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             cccccccccceeeccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHh
Confidence                              112233455689999987 99999989999999999999764

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-40  Score=295.84  Aligned_cols=294  Identities=19%  Similarity=0.165  Sum_probs=213.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-----CC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-----CD   81 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~d   81 (341)
                      +||||||+||||++|++.|+++| ++|++++| +.... ....+..       +. +.+|+++++.+.+++++     +|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~-~~~~~~~-------~~-~~~d~~~~~~~~~~~~~~~~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDN-LKDGT-KFVNLVD-------LN-IADYMDKEDFLIQIMAGEEFGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEEC-CSSGG-GGHHHHT-------SC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEcc-CCCCc-hhhhcCc-------ce-eccccccHHHHHHHHhccccCCCc
Confidence            59999999999999999999999 99999999 65431 1222221       22 67899999999999875     99


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      +|||+|+..... ....+..+++|+.++.+++++|.+.+ + +|||+||.++ |+...      ..+++|+++.      
T Consensus        71 ~vi~~a~~~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v-~g~~~------~~~~~E~~~~------  134 (310)
T 1eq2_A           71 AIFHEGACSSTT-EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAAT-YGGRT------SDFIESREYE------  134 (310)
T ss_dssp             EEEECCSCCCTT-CCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGG-GTTCC------SCBCSSGGGC------
T ss_pred             EEEECcccccCc-ccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHH-hCCCC------CCCCCCCCCC------
Confidence            999999987653 23355889999999999999999998 7 9999999984 44332      3467777622      


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccC
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG  240 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (341)
                          .|.+.|+.+|..+|.+++.++ +.|++++++||+.+||++.........++..++..+..+....    ..+++.+
T Consensus       135 ----~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~  206 (310)
T 1eq2_A          135 ----KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPK----LFEGSEN  206 (310)
T ss_dssp             ----CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC----------------
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcE----EecCCCc
Confidence                346899999999999999998 6699999999999999976532111234566666655544221    1123445


Q ss_pred             -CCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCcCC-----CCcceEeecchhhhh
Q 019415          241 -KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEYLD-----VPKREIKWGGTKLEE  313 (341)
Q Consensus       241 -~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~d~~k~~~  313 (341)
                       .++|+|++|+|+++..+++++. .++||+++ ..+|+.|+++.+.+.++...++....+     .......+|++|+++
T Consensus       207 ~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (310)
T 1eq2_A          207 FKRDFVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRA  285 (310)
T ss_dssp             -CBCEEEHHHHHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHHHH
T ss_pred             ceEccEEHHHHHHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhhhcccccccccchHHHHh
Confidence             7899999999999999998766 67999987 469999999999998854312111111     123346789999988


Q ss_pred             cCC-cccccHHHHHHHHHHHHHHc
Q 019415          314 KGF-EYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       314 lg~-~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ||| .|.++++++|+++++|++++
T Consensus       286 lG~~~~~~~l~~~l~~~~~~~~~~  309 (310)
T 1eq2_A          286 AGYDKPFKTVAEGVTEYMAWLNRD  309 (310)
T ss_dssp             TTCCCCCCCHHHHHHHHHHHTC--
T ss_pred             cCCCCCCCCHHHHHHHHHHHHHhc
Confidence            999 78889999999999998753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=9.5e-41  Score=296.11  Aligned_cols=276  Identities=11%  Similarity=0.001  Sum_probs=217.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi   84 (341)
                      |+||||||+||||++|++.|+ +|++|++++| +.                   .++.+|++|++.+.+++++  +|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r-~~-------------------~~~~~D~~d~~~~~~~~~~~~~d~vi   59 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDV-HS-------------------KEFCGDFSNPKGVAETVRKLRPDVIV   59 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECT-TC-------------------SSSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecc-cc-------------------ccccccCCCHHHHHHHHHhcCCCEEE
Confidence            589999999999999999999 8999999999 43                   1367999999999999986  99999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... ...++..+++|+.++.+++++|++.+ + +|||+||.++ |+...      ..+++|+++.        
T Consensus        60 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v-y~~~~------~~~~~E~~~~--------  122 (299)
T 1n2s_A           60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYV-FPGTG------DIPWQETDAT--------  122 (299)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGG-SCCCT------TCCBCTTSCC--------
T ss_pred             ECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccE-EeCCC------CCCCCCCCCC--------
Confidence            9999765432 33456889999999999999999988 6 8999999984 44333      3577887632        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                        .|.+.|+.+|..+|++++.++   .+++++||+.+||++..      .++..++..+..+......+++      .++
T Consensus       123 --~p~~~Y~~sK~~~E~~~~~~~---~~~~ilRp~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~~------~~~  185 (299)
T 1n2s_A          123 --SPLNVYGKTKLAGEKALQDNC---PKHLIFRTSWVYAGKGN------NFAKTMLRLAKERQTLSVINDQ------YGA  185 (299)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHHC---SSEEEEEECSEECSSSC------CHHHHHHHHHHHCSEEEEECSC------EEC
T ss_pred             --CCccHHHHHHHHHHHHHHHhC---CCeEEEeeeeecCCCcC------cHHHHHHHHHhcCCCEEeecCc------ccC
Confidence              346899999999999999875   38999999999999754      2455666665555432222223      899


Q ss_pred             cccHHHHHHHHHHhhcCC--CC--CceEEEecc-ccCHHHHHHHHHHhCCCC-------c---cccC---cCCCCcceEe
Q 019415          244 LVHIDDVCEAHIFCMEKP--SM--SGRFFCTNV-FVSSAEIASCLQQNYPEF-------H---IKQE---YLDVPKREIK  305 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~--~~--~g~~n~~~~-~~s~~e~~~~i~~~~~~~-------~---~~~~---~~~~~~~~~~  305 (341)
                      ++|++|+|+++..+++++  ..  .++||++++ .+|+.|+++.+.+.++..       .   .+..   ..........
T Consensus       186 ~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (299)
T 1n2s_A          186 PTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSR  265 (299)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCC
T ss_pred             CeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCcee
Confidence            999999999999999865  22  569999884 699999999999887421       0   1110   0112345678


Q ss_pred             ecchhhhh-cCCcccccHHHHHHHHHHHHHHcCC
Q 019415          306 WGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSGY  338 (341)
Q Consensus       306 ~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~  338 (341)
                      +|++|+++ |||+|+ +++++|+++++|+++...
T Consensus       266 ~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~~  298 (299)
T 1n2s_A          266 LNTEKFQRNFDLILP-QWELGVKRMLTEMFTTTT  298 (299)
T ss_dssp             BCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSCCC
T ss_pred             eeHHHHHHhcCCCCC-CHHHHHHHHHHHHHhcCC
Confidence            99999988 999999 999999999999998764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=4.5e-40  Score=297.02  Aligned_cols=312  Identities=20%  Similarity=0.238  Sum_probs=226.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEE-ecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFF-EAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +......+... ....  ..+++++ .+|++|++.+.++++++|+
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKY--PGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHHS--TTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC-CcccHHHHHHHhhccC--CCceEEEEecCCcChHHHHHHHcCCCE
Confidence            4589999999999999999999999999999999 65432222111 1100  1368888 8999999999999999999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHh-cCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC--
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVK-SGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDH--  159 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~--  159 (341)
                      |||+|+......  .++..+++|+.++.+++++|.+ .+ +++|||+||.++++......   ...+++|+++.....  
T Consensus        87 vih~A~~~~~~~--~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~---~~~~~~E~~~~~~~~~~  160 (342)
T 1y1p_A           87 VAHIASVVSFSN--KYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNV---EGIYLDEKSWNLESIDK  160 (342)
T ss_dssp             EEECCCCCSCCS--CHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTC---CCCEECTTCCCHHHHHH
T ss_pred             EEEeCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCC---CCcccCccccCchhhhh
Confidence            999999876532  3458899999999999999985 45 89999999998665322100   025677876421000  


Q ss_pred             ----CCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCc-hhhhhHhhHhcCccc--c
Q 019415          160 ----PLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPV-SVIGGLCQLTNNEYV--Y  229 (341)
Q Consensus       160 ----~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~--~  229 (341)
                          .......+.+.|+.+|..+|.+++.++ ++  +++++++||+++||+.....  ... .+..++..+..+...  +
T Consensus       161 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  238 (342)
T 1y1p_A          161 AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPE--TQSGSTSGWMMSLFNGEVSPAL  238 (342)
T ss_dssp             HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTT--TCCCHHHHHHHHHHTTCCCHHH
T ss_pred             hccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCC--CCCccHHHHHHHHHcCCCcccc
Confidence                000012457899999999999999987 33  78999999999999976543  111 455566555544422  2


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEeccccCHHHHHHHHHHhCCCCccccCcCCCCcceEeecc
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGG  308 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~  308 (341)
                      +.. +      .++|+|++|+|++++.+++++...| .+.++++.+|+.|+++.+.+.++...++....+.......+|+
T Consensus       239 ~~~-~------~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~  311 (342)
T 1y1p_A          239 ALM-P------PQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDT  311 (342)
T ss_dssp             HTC-C------SEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECC
T ss_pred             ccC-C------cCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCccccccccCCh
Confidence            222 2      7899999999999999998765556 4545556799999999999999754343332222223467899


Q ss_pred             hhhhh-cCC---cccccHHHHHHHHHHHHH
Q 019415          309 TKLEE-KGF---EYNYDLKMILDDSIKCGR  334 (341)
Q Consensus       309 ~k~~~-lg~---~~~~~~~~~l~~~~~~~~  334 (341)
                      +|+++ |||   .+.++++++|+++++|++
T Consensus       312 ~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          312 APSLEILKSLGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             HHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred             HHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence            99987 887   455589999999999874

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=7e-40  Score=300.37  Aligned_cols=302  Identities=13%  Similarity=0.077  Sum_probs=224.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch--hhhhHhhhC-CCCCC-ceEEEecCCCChHHHHHHhcC--C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK--SKVDLLKSL-PGAET-RLIFFEAEIYDPDTFENAIQG--C   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~-~~~~~-~~~~~~~Dl~~~~~~~~~~~~--~   80 (341)
                      |+||||||+||||++|++.|++.|++|++++| +....  ..++.+... ..... +++++.+|++|++.+.+++++  +
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  107 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIR-RSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP  107 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEec-CCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCC
Confidence            58999999999999999999999999999999 75431  011111100 00112 788999999999999999985  6


Q ss_pred             CEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcC-----EEEEecccccccCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVK-----RLIYTASVLCASPLKEDGSAGYKDSIDETCY  154 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-----~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~  154 (341)
                      |+|||+|+...... ...++..+++|+.++.+++++|.+.+ ++     +|||+||.++ |+...      . +++|+++
T Consensus       108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~v-yg~~~------~-~~~E~~~  178 (381)
T 1n7h_A          108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEM-FGSTP------P-PQSETTP  178 (381)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGG-GTTSC------S-SBCTTSC
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHH-hCCCC------C-CCCCCCC
Confidence            99999999866432 23456889999999999999999887 65     9999999984 44332      3 6777763


Q ss_pred             CCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-c--ccc
Q 019415          155 TPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-Y--VYQ  230 (341)
Q Consensus       155 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~  230 (341)
                      .          .+.+.|+.+|..+|.+++.++ +.+++++++|++++|||+..... ....+..++..+..+. .  .++
T Consensus       179 ~----------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~-~~~~~~~~~~~~~~g~~~~~~~g  247 (381)
T 1n7h_A          179 F----------HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENF-VTRKITRALGRIKVGLQTKLFLG  247 (381)
T ss_dssp             C----------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTS-HHHHHHHHHHHHHHTSCCCEEES
T ss_pred             C----------CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcc-hhHHHHHHHHHHHcCCCCeEEeC
Confidence            2          236889999999999999988 56899999999999999754320 0011222333333232 1  233


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCc---cccC---cCCCCcce
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFH---IKQE---YLDVPKRE  303 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~---~~~~---~~~~~~~~  303 (341)
                      .+.+      .++|+|++|+|++++.+++++. .++||++++ .+|+.|+++.+.+.++...   ++..   ..+.....
T Consensus       248 ~~~~------~~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~  320 (381)
T 1n7h_A          248 NLQA------SRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDN  320 (381)
T ss_dssp             CTTC------EEECEEHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCB
T ss_pred             CCCc------eeeeEEHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCcccccc
Confidence            3333      8899999999999999998754 479999885 5999999999999986421   1111   11234455


Q ss_pred             Eeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          304 IKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       304 ~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ..+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       321 ~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~  354 (381)
T 1n7h_A          321 LQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL  354 (381)
T ss_dssp             CCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence            6789999987 99999889999999999998664

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-40  Score=290.62  Aligned_cols=270  Identities=15%  Similarity=0.062  Sum_probs=213.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      +.|+|||||||||||++|++.|+++|++|++++| +                       .+|++|++.+.++++  ++|+
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~-----------------------~~Dl~d~~~~~~~~~~~~~d~   66 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDV-Q-----------------------DLDITNVLAVNKFFNEKKPNV   66 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECT-T-----------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccC-c-----------------------cCCCCCHHHHHHHHHhcCCCE
Confidence            3589999999999999999999999999999998 3                       379999999999998  7999


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |||+|+...... ...++..+++|+.++.+++++|.+.+ + +|||+||.+++. ...      ..+++|+++.      
T Consensus        67 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~-~~~------~~~~~E~~~~------  131 (292)
T 1vl0_A           67 VINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFD-GEA------KEPITEFDEV------  131 (292)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSC-SCC------SSCBCTTSCC------
T ss_pred             EEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeEC-CCC------CCCCCCCCCC------
Confidence            999999765432 23456889999999999999999998 7 999999998544 322      3577887632      


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCC
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK  241 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (341)
                          .+.+.|+.+|..+|.+++.++   .+++++||+.+||+ ..      .++..++..+..+......+++      .
T Consensus       132 ----~~~~~Y~~sK~~~E~~~~~~~---~~~~~lR~~~v~G~-~~------~~~~~~~~~~~~~~~~~~~~~~------~  191 (292)
T 1vl0_A          132 ----NPQSAYGKTKLEGENFVKALN---PKYYIVRTAWLYGD-GN------NFVKTMINLGKTHDELKVVHDQ------V  191 (292)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHC---SSEEEEEECSEESS-SS------CHHHHHHHHHHHCSEEEEESSC------E
T ss_pred             ----CCccHHHHHHHHHHHHHHhhC---CCeEEEeeeeeeCC-Cc------ChHHHHHHHHhcCCcEEeecCe------e
Confidence                236789999999999999875   47999999999999 22      2355555555444422112222      7


Q ss_pred             CCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCC----ccccCc---CCCCcceEeecchhhhh
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEF----HIKQEY---LDVPKREIKWGGTKLEE  313 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~----~~~~~~---~~~~~~~~~~d~~k~~~  313 (341)
                      ++++|++|+|+++..+++.+ ..++||++++ .+|+.|+++.+.+.++..    .++...   .........+|++|+++
T Consensus       192 ~~~i~v~Dva~~~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  270 (292)
T 1vl0_A          192 GTPTSTVDLARVVLKVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLEL  270 (292)
T ss_dssp             ECCEEHHHHHHHHHHHHHHT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHH
T ss_pred             eCCccHHHHHHHHHHHHhcC-CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHH
Confidence            89999999999999999876 5569999884 699999999999988532    122211   12234567899999988


Q ss_pred             -cCCcccccHHHHHHHHHHHHHH
Q 019415          314 -KGFEYNYDLKMILDDSIKCGRK  335 (341)
Q Consensus       314 -lg~~~~~~~~~~l~~~~~~~~~  335 (341)
                       |||+|+ +++++|+++++|+++
T Consensus       271 ~lG~~p~-~~~~~l~~~~~~~~~  292 (292)
T 1vl0_A          271 TTGDITR-EWKESLKEYIDLLQM  292 (292)
T ss_dssp             TTCCCCC-BHHHHHHHHHHHHTC
T ss_pred             HcCCCCC-CHHHHHHHHHHHhcC
Confidence             999999 999999999999863

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=4.9e-40  Score=293.71  Aligned_cols=282  Identities=17%  Similarity=0.165  Sum_probs=193.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~V   83 (341)
                      +|+||||||+||||++|++.|+++|++|++++| +...              ++  ++.+|+++++.+.+++++  +|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~--------------~~--~~~~Dl~d~~~~~~~~~~~~~d~v   64 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGF-RRAR--------------PK--FEQVNLLDSNAVHHIIHDFQPHVI   64 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHHCCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEcc-CCCC--------------CC--eEEecCCCHHHHHHHHHhhCCCEE
Confidence            479999999999999999999999999999998 5432              12  788999999999998875  9999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+|+...... ...++..+++|+.++.+++++|.+.+ + +|||+||.+++.+  .      ..+++|+++.       
T Consensus        65 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~--~------~~~~~E~~~~-------  127 (315)
T 2ydy_A           65 VHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDG--T------NPPYREEDIP-------  127 (315)
T ss_dssp             EECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCS--S------SCSBCTTSCC-------
T ss_pred             EECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCC--C------CCCCCCCCCC-------
Confidence            99999765432 33456889999999999999999988 5 9999999985443  2      4678887633       


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh-cCccccccccchhhccCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT-NNEYVYQTLRDTEEILGK  241 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  241 (341)
                         .+.+.|+.+|..+|.+++.+.   ++++++||+.|||+.....   ..++..++..+. .+......+.+      .
T Consensus       128 ---~~~~~Y~~sK~~~e~~~~~~~---~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~------~  192 (315)
T 2ydy_A          128 ---APLNLYGKTKLDGEKAVLENN---LGAAVLRIPILYGEVEKLE---ESAVTVMFDKVQFSNKSANMDHWQ------Q  192 (315)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHC---TTCEEEEECSEECSCSSGG---GSTTGGGHHHHHCCSSCEEEECSS------B
T ss_pred             ---CCcCHHHHHHHHHHHHHHHhC---CCeEEEeeeeeeCCCCccc---ccHHHHHHHHHHhcCCCeeeccCc------e
Confidence               236889999999999999874   6789999999999976521   023444555554 33322222222      7


Q ss_pred             CCcccHHHHHHHHHHhhcCC----CCCceEEEec-cccCHHHHHHHHHHhCCCCcc---ccCc----CCCCcceEeecch
Q 019415          242 LPLVHIDDVCEAHIFCMEKP----SMSGRFFCTN-VFVSSAEIASCLQQNYPEFHI---KQEY----LDVPKREIKWGGT  309 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~----~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~---~~~~----~~~~~~~~~~d~~  309 (341)
                      ++++|++|+|+++..++++.    ...++||+++ ..+|+.|+++.+.+.++....   +...    .........+|++
T Consensus       193 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~  272 (315)
T 2ydy_A          193 RFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCS  272 (315)
T ss_dssp             BCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCH
T ss_pred             ECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchH
Confidence            89999999999999988753    3456999988 469999999999999854211   1111    1123456789999


Q ss_pred             hhhhcCCcccccHHHHHHHHHHHHHHc
Q 019415          310 KLEEKGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       310 k~~~lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      |++++||+|.++++++|+++++|+++.
T Consensus       273 k~~~~G~~p~~~~~~~l~~~~~~~~~~  299 (315)
T 2ydy_A          273 KLETLGIGQRTPFRIGIKESLWPFLID  299 (315)
T ss_dssp             HHHHTTCCCCCCHHHHHHHHHGGGCC-
T ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHccc
Confidence            998789999989999999999999765

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.7e-39  Score=292.13  Aligned_cols=301  Identities=13%  Similarity=0.069  Sum_probs=225.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-------CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-------YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      ++|+||||||+||||++|++.|+++|       ++|++++| +......        ....+++++.+|++|++.+.+++
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r-~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDV-FQPEAPA--------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEES-SCCCCCT--------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEc-cCCcccc--------ccCCceeEEEcCCCCHHHHHHHH
Confidence            46899999999999999999999999       89999999 6543110        11247889999999999999999


Q ss_pred             c-CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC----CcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           78 Q-GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG----TVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        78 ~-~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                      + ++|+|||+|+.........++..+++|+.++.+++++|.+.+    .+++|||+||.++ |+...      ..+++|+
T Consensus        84 ~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~-~~~~~------~~~~~E~  156 (342)
T 2hrz_A           84 EARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAV-FGAPL------PYPIPDE  156 (342)
T ss_dssp             HTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG-CCSSC------CSSBCTT
T ss_pred             hcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHh-hCCCC------CCCcCCC
Confidence            4 899999999986532233456889999999999999998864    3689999999984 44322      3567887


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeC-CCCCCCCCCCchhhhhHhhHhcCcc-cc
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAG-DTNLPYSSTPVSVIGGLCQLTNNEY-VY  229 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~-~~  229 (341)
                      ++.          .+.+.|+.+|..+|.+++.++ +.+++.+++|++.+|| |+.... ....++..++..+..+.. .+
T Consensus       157 ~~~----------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~-~~~~~~~~~~~~~~~~~~~~~  225 (342)
T 2hrz_A          157 FHT----------TPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNA-AASGFFSNILREPLVGQEAVL  225 (342)
T ss_dssp             CCC----------CCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCC-SGGGHHHHHHHHHHTTCCEEE
T ss_pred             CCC----------CCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcc-hhHHHHHHHHHHHhcCCCeec
Confidence            633          236789999999999999988 5689999999999999 543221 112244555555544442 11


Q ss_pred             -ccccchhhccCCCCcccHHHHHHHHHHhhcCCC----CCceEEEeccccCHHHHHHHHHHhCCCCcc-ccCcCCC----
Q 019415          230 -QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS----MSGRFFCTNVFVSSAEIASCLQQNYPEFHI-KQEYLDV----  299 (341)
Q Consensus       230 -~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~----~~g~~n~~~~~~s~~e~~~~i~~~~~~~~~-~~~~~~~----  299 (341)
                       ....      ..++++|++|+|++++.+++.+.    ..++||+++..+|+.|+++.+.+.++.... .....+.    
T Consensus       226 ~~~~~------~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~  299 (342)
T 2hrz_A          226 PVPES------IRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEMIM  299 (342)
T ss_dssp             CSCTT------CEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHH
T ss_pred             cCCCc------cceeeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeeccCcchh
Confidence             2212      26678999999999999998653    345999977679999999999998853221 0111111    


Q ss_pred             ---CcceEeecchhhhhcCCcccccHHHHHHHHHHHHHHcCCC
Q 019415          300 ---PKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYL  339 (341)
Q Consensus       300 ---~~~~~~~d~~k~~~lg~~~~~~~~~~l~~~~~~~~~~~~~  339 (341)
                         ......+|++|+++|||+|+++++++|+++++|++ .|.|
T Consensus       300 ~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~-~~~~  341 (342)
T 2hrz_A          300 RMCEGWAPGFEAKRARELGFTAESSFEEIIQVHIEDEL-GGSL  341 (342)
T ss_dssp             HHHTTSCCCBCCHHHHHTTCCCCSSHHHHHHHHHHHHS-TTCC
T ss_pred             hhhcccccccChHHHHHcCCCCCCCHHHHHHHHHHHhc-CCCC
Confidence               11223689999977999999899999999999998 5544

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.7e-38  Score=289.23  Aligned_cols=297  Identities=15%  Similarity=0.108  Sum_probs=223.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-----CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-----YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-   79 (341)
                      +|+|||||||||||++|++.|+++|     ++|++++| +.....       .  ...+++++.+|++|++.+.+++++ 
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r-~~~~~~-------~--~~~~~~~~~~Dl~d~~~~~~~~~~~   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR-RTRPAW-------H--EDNPINYVQCDISDPDDSQAKLSPL   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES-SCCCSC-------C--CSSCCEEEECCTTSHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC-CCCccc-------c--ccCceEEEEeecCCHHHHHHHHhcC
Confidence            4799999999999999999999999     99999999 655411       0  124789999999999999999998 


Q ss_pred             --CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEE-------EecccccccCCCCCCCCCCCCC
Q 019415           80 --CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS--GTVKRLI-------YTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        80 --~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I-------~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                        +|+|||+|+....    +.+..+++|+.++.+++++|++.  + +++||       |+||.++ |+.....    ..+
T Consensus        71 ~~~d~vih~a~~~~~----~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~v-yg~~~~~----~~~  140 (364)
T 2v6g_A           71 TDVTHVFYVTWANRS----TEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFES-YGKIESH----DPP  140 (364)
T ss_dssp             TTCCEEEECCCCCCS----SHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGG-TTTSCCC----CSS
T ss_pred             CCCCEEEECCCCCcc----hHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhh-ccccccC----CCC
Confidence              9999999997642    24588999999999999999998  6 89998       7999884 5433211    457


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCC-ceEEEEecCceeCCCCCCCCCCCchhhh-hHhhH--h
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSG-LEVVALALGVVAGDTNLPYSSTPVSVIG-GLCQL--T  223 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~-~~~~vlRp~~v~G~~~~~~~~~~~~~~~-~~~~~--~  223 (341)
                      ++|+++..+         +.+.|    ..+|++++.+. +++ ++++++||+.|||++....  ....... +.+.+  .
T Consensus       141 ~~E~~~~~~---------~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~  205 (364)
T 2v6g_A          141 YTEDLPRLK---------YMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSM--MNLVGTLCVYAAICKH  205 (364)
T ss_dssp             BCTTSCCCS---------SCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCS--SCHHHHHHHHHHHHHH
T ss_pred             CCccccCCc---------cchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcc--cchHHHHHHHHHHHHh
Confidence            788764322         13567    35788998887 466 9999999999999977543  2223333 33433  1


Q ss_pred             cCc--cccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc-ccCHHHHHHHHHHhCCCC------ccc
Q 019415          224 NNE--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV-FVSSAEIASCLQQNYPEF------HIK  293 (341)
Q Consensus       224 ~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~-~~s~~e~~~~i~~~~~~~------~~~  293 (341)
                      .+.  ..++++.+.   ....+++|++|+|++++.+++++...| +||++++ .+|+.|+++.+++.++..      .+|
T Consensus       206 ~g~~~~~~g~~~~~---~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p  282 (364)
T 2v6g_A          206 EGKVLRFTGCKAAW---DGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVD  282 (364)
T ss_dssp             HTCCBCCCSCHHHH---HSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCC
T ss_pred             cCCceecCCCcccc---cccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCC
Confidence            232  223333221   126889999999999999998765445 9999985 599999999999988532      122


Q ss_pred             cCc--------------------CCCC--c------------ce-EeecchhhhhcCCcccccHHHHHHHHHHHHHHcCC
Q 019415          294 QEY--------------------LDVP--K------------RE-IKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGY  338 (341)
Q Consensus       294 ~~~--------------------~~~~--~------------~~-~~~d~~k~~~lg~~~~~~~~~~l~~~~~~~~~~~~  338 (341)
                      ...                    .+..  .            .. ..+|++|+++|||+|.++++++|+++++|+++.|+
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~  362 (364)
T 2v6g_A          283 LKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKI  362 (364)
T ss_dssp             CCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTS
T ss_pred             ccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCC
Confidence            110                    0110  0            33 58999999779999988999999999999999999


Q ss_pred             CC
Q 019415          339 LP  340 (341)
Q Consensus       339 ~~  340 (341)
                      ||
T Consensus       363 lp  364 (364)
T 2v6g_A          363 VP  364 (364)
T ss_dssp             CC
T ss_pred             CC
Confidence            98

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=8.5e-39  Score=312.44  Aligned_cols=309  Identities=18%  Similarity=0.167  Sum_probs=230.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHH-HHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDT-FENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-~~~~~~~~d~   82 (341)
                      ++|+||||||+||||++|+++|++. |++|++++| +.....   .+..    ..+++++.+|++++++ +.++++++|+
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r-~~~~~~---~~~~----~~~v~~v~~Dl~d~~~~~~~~~~~~D~  385 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDAIS---RFLN----HPHFHFVEGDISIHSEWIEYHVKKCDV  385 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEES-CCTTTG---GGTT----CTTEEEEECCTTTCHHHHHHHHHHCSE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEc-Cchhhh---hhcc----CCceEEEECCCCCcHHHHHHhhcCCCE
Confidence            4689999999999999999999998 899999999 754321   1111    2478999999999765 7788889999


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |||+|+...... ..+++..+++|+.++.+++++|.+.+  ++|||+||.++ |+...      ..+++|+++.....+ 
T Consensus       386 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~v-yg~~~------~~~~~E~~~~~~~~p-  455 (660)
T 1z7e_A          386 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEV-YGMCS------DKYFDEDHSNLIVGP-  455 (660)
T ss_dssp             EEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGG-GBTCC------SSSBCTTTCCEEECC-
T ss_pred             EEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHH-cCCCC------CcccCCCccccccCc-
Confidence            999999866432 33456889999999999999999987  89999999985 43333      356777764210000 


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCC----CCCCchhhhhHhhHhcCcc--ccccccc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPY----SSTPVSVIGGLCQLTNNEY--VYQTLRD  234 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~  234 (341)
                        ...+.+.|+.+|..+|.+++.++ +.|++++++||++|||+.....    .....++..++..+..+..  .++++.+
T Consensus       456 --~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~  533 (660)
T 1z7e_A          456 --VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ  533 (660)
T ss_dssp             --TTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCC
T ss_pred             --ccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCe
Confidence              01346789999999999999987 5699999999999999976420    0012345555555544442  2333333


Q ss_pred             hhhccCCCCcccHHHHHHHHHHhhcCCC--CC-ceEEEecc--ccCHHHHHHHHHHhCCCCc----cccCc---------
Q 019415          235 TEEILGKLPLVHIDDVCEAHIFCMEKPS--MS-GRFFCTNV--FVSSAEIASCLQQNYPEFH----IKQEY---------  296 (341)
Q Consensus       235 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~-g~~n~~~~--~~s~~e~~~~i~~~~~~~~----~~~~~---------  296 (341)
                            .++|+|++|+|++++.+++.+.  .. ++||++++  .+|+.|+++.+.+.++...    +|...         
T Consensus       534 ------~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~  607 (660)
T 1z7e_A          534 ------KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSS  607 (660)
T ss_dssp             ------EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHH
T ss_pred             ------EEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccc
Confidence                  8999999999999999998754  33 49999885  5899999999998764211    11110         


Q ss_pred             ----CCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcCCC
Q 019415          297 ----LDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSGYL  339 (341)
Q Consensus       297 ----~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~~  339 (341)
                          .........+|++|+++ |||+|+++++++|+++++|+++...+
T Consensus       608 ~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~~  655 (660)
T 1z7e_A          608 YYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL  655 (660)
T ss_dssp             HHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSCC
T ss_pred             cccccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhccc
Confidence                00123456789999987 99999889999999999999887654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=1.1e-38  Score=281.12  Aligned_cols=265  Identities=11%  Similarity=0.108  Sum_probs=202.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+|||||| ||||++|++.|+++|++|++++| +...   ...+..     .+++++.+|++|.+     ++++|+||
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r-~~~~---~~~~~~-----~~~~~~~~D~~d~~-----~~~~d~vi   68 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSR-NPDQ---MEAIRA-----SGAEPLLWPGEEPS-----LDGVTHLL   68 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEES-CGGG---HHHHHH-----TTEEEEESSSSCCC-----CTTCCEEE
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEc-Chhh---hhhHhh-----CCCeEEEecccccc-----cCCCCEEE
Confidence            4589999998 99999999999999999999999 7643   222222     37899999999954     78999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHh--cCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVK--SGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |+|+......            ..+.++++++++  .+ +++|||+||.+ +|+...      ..+++|+++.       
T Consensus        69 ~~a~~~~~~~------------~~~~~l~~a~~~~~~~-~~~~v~~Ss~~-vyg~~~------~~~~~E~~~~-------  121 (286)
T 3ius_A           69 ISTAPDSGGD------------PVLAALGDQIAARAAQ-FRWVGYLSTTA-VYGDHD------GAWVDETTPL-------  121 (286)
T ss_dssp             ECCCCBTTBC------------HHHHHHHHHHHHTGGG-CSEEEEEEEGG-GGCCCT------TCEECTTSCC-------
T ss_pred             ECCCcccccc------------HHHHHHHHHHHhhcCC-ceEEEEeecce-ecCCCC------CCCcCCCCCC-------
Confidence            9999765431            125688999988  56 89999999998 554433      4578888733       


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL  242 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (341)
                         .|.+.|+.+|..+|++++.+  .+++++++||+++||++....       .   ....+....+....+      .+
T Consensus       122 ---~p~~~Y~~sK~~~E~~~~~~--~~~~~~ilRp~~v~G~~~~~~-------~---~~~~~~~~~~~~~~~------~~  180 (286)
T 3ius_A          122 ---TPTAARGRWRVMAEQQWQAV--PNLPLHVFRLAGIYGPGRGPF-------S---KLGKGGIRRIIKPGQ------VF  180 (286)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHS--TTCCEEEEEECEEEBTTBSSS-------T---TSSSSCCCEEECTTC------CB
T ss_pred             ---CCCCHHHHHHHHHHHHHHhh--cCCCEEEEeccceECCCchHH-------H---HHhcCCccccCCCCc------cc
Confidence               34689999999999999987  589999999999999975432       1   111122222222233      89


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCc---cccCcC-CC------CcceEeecchhh
Q 019415          243 PLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFH---IKQEYL-DV------PKREIKWGGTKL  311 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~---~~~~~~-~~------~~~~~~~d~~k~  311 (341)
                      +|+|++|+|+++..+++++..+++||++++ .+|+.|+++.+++.++...   ++.... ..      ......+|++|+
T Consensus       181 ~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~  260 (286)
T 3ius_A          181 SRIHVEDIAQVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRI  260 (286)
T ss_dssp             CEEEHHHHHHHHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHH
T ss_pred             ceEEHHHHHHHHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHH
Confidence            999999999999999998776669999875 5999999999999985321   111110 01      136778999999


Q ss_pred             hh-cCCcccc-cHHHHHHHHHHH
Q 019415          312 EE-KGFEYNY-DLKMILDDSIKC  332 (341)
Q Consensus       312 ~~-lg~~~~~-~~~~~l~~~~~~  332 (341)
                      ++ |||+|++ +++++|+++++.
T Consensus       261 ~~~lG~~p~~p~~~e~l~~~~~~  283 (286)
T 3ius_A          261 KEELGVRLKYPNYRVGLEALQAD  283 (286)
T ss_dssp             HHTTCCCCSCSSHHHHHHHHHHT
T ss_pred             HHHhCCCCCcCCHHHHHHHHHHh
Confidence            88 9999999 699999999874

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=7.2e-38  Score=308.10  Aligned_cols=316  Identities=14%  Similarity=0.111  Sum_probs=226.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch-hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK-SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   81 (341)
                      ++|+||||||+||||++|++.|+++|++|++++| +.... .....+..+.  ..+++++.+|+++++.+.++++  ++|
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~D   86 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADN-LSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKID   86 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEC-CCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCCC
Confidence            4579999999999999999999999999999999 65431 1112222111  1368899999999999999998  899


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      +|||+|+...... .......+++|+.++.+++++|++.+ +++|||+||.++ |+.....  ....+++|+++.     
T Consensus        87 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~v-yg~~~~~--~~~~~~~E~~~~-----  157 (699)
T 1z45_A           87 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATV-YGDATRF--PNMIPIPEECPL-----  157 (699)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGG-GCCGGGS--TTCCSBCTTSCC-----
T ss_pred             EEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHH-hCCCccc--cccCCccccCCC-----
Confidence            9999999865432 22234789999999999999999988 899999999985 4332100  002456666522     


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-c--CCceEEEEecCceeCCCCCCC-C-----CCCchhhhhHhhHhcC-c--cc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-S--SGLEVVALALGVVAGDTNLPY-S-----STPVSVIGGLCQLTNN-E--YV  228 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~--~~~~~~vlRp~~v~G~~~~~~-~-----~~~~~~~~~~~~~~~~-~--~~  228 (341)
                           .+.+.|+.+|.++|++++.++ +  .+++++++||+++||+..... .     ....++..+.....+. .  ..
T Consensus       158 -----~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (699)
T 1z45_A          158 -----GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYI  232 (699)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCC
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEE
Confidence                 236799999999999999887 4  689999999999999864321 0     0123455554444332 1  22


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCC------C-CCceEEEecc-ccCHHHHHHHHHHhCCCCccccCcC---
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP------S-MSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYL---  297 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~------~-~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~---  297 (341)
                      ++......++.+.++|||++|+|++++.+++..      . ..++||++++ .+|+.|+++.+++.++. +++....   
T Consensus       233 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~  311 (699)
T 1z45_A          233 FGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-DLPYKVTGRR  311 (699)
T ss_dssp             C------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC-CCCC------
T ss_pred             eCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCC-CCCceecCCC
Confidence            221000112334899999999999999988642      1 2348999874 59999999999998743 2332221   


Q ss_pred             CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcCC
Q 019415          298 DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSGY  338 (341)
Q Consensus       298 ~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~~  338 (341)
                      ........+|++|+++ |||+|+++++++|+++++|+++...
T Consensus       312 ~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~  353 (699)
T 1z45_A          312 AGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF  353 (699)
T ss_dssp             ---CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             CCccccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence            2334567899999987 9999998999999999999988753

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=5e-38  Score=278.56  Aligned_cols=273  Identities=17%  Similarity=0.145  Sum_probs=201.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |||||||||||||++|++.|+++||+|++++| ++..              ..   +..    .+...+.++++|+|||+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R-~~~~--------------~~---~~~----~~~~~~~l~~~d~vihl   58 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSR-KPGP--------------GR---ITW----DELAASGLPSCDAAVNL   58 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCT--------------TE---EEH----HHHHHHCCCSCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CCCc--------------Ce---eec----chhhHhhccCCCEEEEe
Confidence            79999999999999999999999999999999 6532              11   122    23334567899999999


Q ss_pred             ccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           87 ATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        87 a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      |+.....     .......+++.|+.++.++++++...+ ...+||+.||.+ +|+...      ..+.+|+++..    
T Consensus        59 a~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~-vyg~~~------~~~~~E~~p~~----  127 (298)
T 4b4o_A           59 AGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA-YYQPSL------TAEYDEDSPGG----  127 (298)
T ss_dssp             CCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG-GSCCCS------SCCBCTTCCCS----
T ss_pred             ccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee-eecCCC------CCcccccCCcc----
Confidence            9853221     123335788999999999999998876 234588889988 555444      56778876332    


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhcc
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEIL  239 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  239 (341)
                            +.+.|+..|...|.... ..+.+++++++||+.|||++..       ....+......+. ..++.+.+     
T Consensus       128 ------~~~~~~~~~~~~e~~~~-~~~~~~~~~~~r~~~v~g~~~~-------~~~~~~~~~~~~~~~~~g~g~~-----  188 (298)
T 4b4o_A          128 ------DFDFFSNLVTKWEAAAR-LPGDSTRQVVVRSGVVLGRGGG-------AMGHMLLPFRLGLGGPIGSGHQ-----  188 (298)
T ss_dssp             ------CSSHHHHHHHHHHHHHC-CSSSSSEEEEEEECEEECTTSH-------HHHHHHHHHHTTCCCCBTTSCS-----
T ss_pred             ------ccchhHHHHHHHHHHHH-hhccCCceeeeeeeeEEcCCCC-------chhHHHHHHhcCCcceecccCc-----
Confidence                  35667777777765432 2256899999999999999642       2444444443333 44555555     


Q ss_pred             CCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCC---ccccCcC---CC------CcceEee
Q 019415          240 GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEF---HIKQEYL---DV------PKREIKW  306 (341)
Q Consensus       240 ~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~---~~~~~~~---~~------~~~~~~~  306 (341)
                       .++|||++|+|+++..+++++...|+||+++ +++|+.|+++.+++.++..   ++|....   -+      ...+.++
T Consensus       189 -~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv  267 (298)
T 4b4o_A          189 -FFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKV  267 (298)
T ss_dssp             -BCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCB
T ss_pred             -eeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEE
Confidence             9999999999999999999988889999988 5699999999999988532   2221110   00      1234567


Q ss_pred             cchhhhhcCCccccc-HHHHHHHHHHH
Q 019415          307 GGTKLEEKGFEYNYD-LKMILDDSIKC  332 (341)
Q Consensus       307 d~~k~~~lg~~~~~~-~~~~l~~~~~~  332 (341)
                      ++.|++++||++++| ++++|+++++.
T Consensus       268 ~~~kl~~~Gf~f~yp~l~~al~~l~~~  294 (298)
T 4b4o_A          268 IPRRTLATGYQYSFPELGAALKEIAEN  294 (298)
T ss_dssp             CCHHHHHTTCCCSCCSHHHHHHHHHHC
T ss_pred             cHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence            889999999999986 99999999874

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.2e-36  Score=288.97  Aligned_cols=276  Identities=15%  Similarity=0.110  Sum_probs=205.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|||||||||||++|++.|++.|++|++++| +...                ...+.+|+.+.  +.++++++|+|||
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R-~~~~----------------~~~v~~d~~~~--~~~~l~~~D~Vih  207 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVR-KEPK----------------PGKRFWDPLNP--ASDLLDGADVLVH  207 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-SSCC----------------TTCEECCTTSC--CTTTTTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CCCC----------------ccceeecccch--hHHhcCCCCEEEE
Confidence            689999999999999999999999999999999 6543                11266777653  4566789999999


Q ss_pred             eccCCcccc--chhHhHhhhhhhhHHHHHHHH-HHhcCCcCEEEEecccccccC-CCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           86 VATPLQHID--GYLYKNVVEACVGAAKKIASF-CVKSGTVKRLIYTASVLCASP-LKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        86 ~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~-~~~~~~~~~~I~~Ss~~~~~~-~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      +|+......  ....+.++++|+.++.+++++ +++.+ +++|||+||.+ +|+ ...      ..+++|+++.      
T Consensus       208 ~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~-vyg~~~~------~~~~~E~~~~------  273 (516)
T 3oh8_A          208 LAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVG-FYGHDRG------DEILTEESES------  273 (516)
T ss_dssp             CCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGG-GGCSEEE------EEEECTTSCC------
T ss_pred             CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcce-EecCCCC------CCccCCCCCC------
Confidence            999864422  334567899999999999999 55555 89999999998 454 222      4577887643      


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhccC
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEILG  240 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  240 (341)
                           +.+.|+.+|...|.++..+.+.|++++++||++|||++.       ..+..+...+..+. ..++.+      .+
T Consensus       274 -----~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~-------~~~~~~~~~~~~g~~~~~g~g------~~  335 (516)
T 3oh8_A          274 -----GDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRG-------GMLPLLKTLFSTGLGGKFGDG------TS  335 (516)
T ss_dssp             -----CSSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB-------SHHHHHHHTTC---CCCCTTS------CC
T ss_pred             -----CcChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC-------ChHHHHHHHHHhCCCcccCCC------Cc
Confidence                 347899999999988765556799999999999999963       13455554443332 333333      34


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCC---ccccCcC----------CCCcceEee
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEF---HIKQEYL----------DVPKREIKW  306 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~---~~~~~~~----------~~~~~~~~~  306 (341)
                      .++|||++|+|+++..+++++...|+||+++ +.+|+.|+++.+++.++..   ++|....          ........+
T Consensus       336 ~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~  415 (516)
T 3oh8_A          336 WFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRT  415 (516)
T ss_dssp             EECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEE
T ss_pred             eEceEeHHHHHHHHHHHHhCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCee
Confidence            8999999999999999999887778999987 5699999999999987532   1222110          012346788


Q ss_pred             cchhhhhcCCccccc-HHHHHHHHHHH
Q 019415          307 GGTKLEEKGFEYNYD-LKMILDDSIKC  332 (341)
Q Consensus       307 d~~k~~~lg~~~~~~-~~~~l~~~~~~  332 (341)
                      +++|+++|||+|+++ ++++|++++++
T Consensus       416 ~~~kl~~lG~~~~~~~l~e~l~~~l~~  442 (516)
T 3oh8_A          416 APAALENLSHTFRYTDIGAAIAHELGY  442 (516)
T ss_dssp             CCHHHHHTTCCCSCSSHHHHHHHHHTC
T ss_pred             chHHHHHCCCCCCCCCHHHHHHHHhCc
Confidence            999999999999998 99999999864

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=4.4e-36  Score=279.12  Aligned_cols=311  Identities=13%  Similarity=0.069  Sum_probs=218.0

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh----C------CCCCCceEEEecCCCChHH
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS----L------PGAETRLIFFEAEIYDPDT   72 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~------~~~~~~~~~~~~Dl~~~~~   72 (341)
                      ..++|+|||||||||||++|+++|++.|++|++++| +.........+..    .      .....++.++.+|+++++.
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIR-ADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEE-CSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEEC-CCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            335679999999999999999999999999999999 7763222222211    0      0012489999999999887


Q ss_pred             HHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           73 FENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        73 ~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                      +. .+.++|+|||+|+.....  .+++..+++|+.++.+++++|.+ + .++|||+||.++ + ..... .....+++|+
T Consensus       145 l~-~~~~~d~Vih~A~~~~~~--~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~-G-~~~~~-~~~~~~~~E~  216 (427)
T 4f6c_A          145 VV-LPENMDTIIHAGARTDHF--GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-G-TYFDI-DTEDVTFSEA  216 (427)
T ss_dssp             CC-CSSCCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGG-G-SEECS-SCSCCEECTT
T ss_pred             CC-CcCCCCEEEECCcccCCC--CCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHh-C-CCccC-CCCCcccccc
Confidence            77 778999999999987543  33568899999999999999999 5 799999999986 2 21100 0014678888


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCC---chhhhhHhhHhcCccc-
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTP---VSVIGGLCQLTNNEYV-  228 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~-  228 (341)
                      ++...       ..+.+.|+.+|+.+|.+++.+.+.|++++++||++|||+........+   .++..++..+...... 
T Consensus       217 ~~~~~-------~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (427)
T 4f6c_A          217 DVYKG-------QLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG  289 (427)
T ss_dssp             CSCSS-------CCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEE
T ss_pred             ccccC-------CCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCC
Confidence            75332       235789999999999999998767999999999999999765431111   2344555554444322 


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCcC----------
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEYL----------  297 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~----------  297 (341)
                      .+.      +.+.++|++++|+|++++.++..+..+++||+++ +.+++.|+++.+++ ++...++....          
T Consensus       290 ~~~------~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~~~~~~~~~l~~~~~~  362 (427)
T 4f6c_A          290 VSM------AEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELVSDESFNEILQKQDMY  362 (427)
T ss_dssp             HHH------HTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEECHHHHHHHHHHTTCH
T ss_pred             Ccc------ccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCcccCHHHHHHHHHhcCch
Confidence            222      2348999999999999999998777556999987 56999999999998 43111111000          


Q ss_pred             --------CCCcceEeecchhhh----hcCCcccccHHHHHHHHHHHHHHc
Q 019415          298 --------DVPKREIKWGGTKLE----EKGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       298 --------~~~~~~~~~d~~k~~----~lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                              ........+|+++..    ++||.+...-++.++.+++++++.
T Consensus       363 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~  413 (427)
T 4f6c_A          363 ETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI  413 (427)
T ss_dssp             HHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence                    002235678887764    379988844556888988888653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1e-34  Score=247.01  Aligned_cols=220  Identities=16%  Similarity=0.105  Sum_probs=170.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+||||||+||||++|++.|+++|++|++++| +....         .....+++++.+|++|++.+.++++++|+|||
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~---------~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~   73 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVR-HPEKI---------KIENEHLKVKKADVSSLDEVCEVCKGADAVIS   73 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECS-CGGGC---------CCCCTTEEEECCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEc-Ccccc---------hhccCceEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            589999999999999999999999999999999 75431         11225899999999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +|+.....     ...++.|+.++.++++++++.+ +++|||+||.+++++...        ...|++.          .
T Consensus        74 ~a~~~~~~-----~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~--------~~~~~~~----------~  129 (227)
T 3dhn_A           74 AFNPGWNN-----PDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPG--------LRLMDSG----------E  129 (227)
T ss_dssp             CCCC-----------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETT--------EEGGGTT----------C
T ss_pred             eCcCCCCC-----hhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCC--------CccccCC----------c
Confidence            99875322     2578999999999999999998 999999999986664322        1222221          2


Q ss_pred             chhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCc
Q 019415          166 EYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL  244 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (341)
                      .+.+.|+.+|..+|.+++.+. +.+++++++||+.+||++....    .+.       ......+....       .+++
T Consensus       130 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~----~~~-------~~~~~~~~~~~-------~~~~  191 (227)
T 3dhn_A          130 VPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTG----RYR-------LGKDDMIVDIV-------GNSH  191 (227)
T ss_dssp             SCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCC----CCE-------EESSBCCCCTT-------SCCE
T ss_pred             chHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccc----cee-------ecCCCcccCCC-------CCcE
Confidence            346899999999999999998 7799999999999999976543    110       11111111111       5899


Q ss_pred             ccHHHHHHHHHHhhcCCCCCc-eEEEec-cccCHH
Q 019415          245 VHIDDVCEAHIFCMEKPSMSG-RFFCTN-VFVSSA  277 (341)
Q Consensus       245 i~v~D~a~~~~~~~~~~~~~g-~~n~~~-~~~s~~  277 (341)
                      +|++|+|+++..+++++...| +|++++ ++.++.
T Consensus       192 i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          192 ISVEDYAAAMIDELEHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             EEHHHHHHHHHHHHHSCCCCSEEEEEECCSCCC--
T ss_pred             EeHHHHHHHHHHHHhCccccCcEEEEEeehhcccC
Confidence            999999999999999988666 999987 556664

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=2.4e-35  Score=279.89  Aligned_cols=306  Identities=12%  Similarity=0.076  Sum_probs=219.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh----C------CCCCCceEEEecCCCChHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS----L------PGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~------~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      .+|+|||||||||||++|+++|.+.|++|++++| +.........+..    .      .....+++++.+|+.+++.+.
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIR-ADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEE-SSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEEC-CCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            3589999999999999999999999999999999 7763222222110    0      011358999999999987777


Q ss_pred             HHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCC--CCCCCCCCCCCCCC
Q 019415           75 NAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLK--EDGSAGYKDSIDET  152 (341)
Q Consensus        75 ~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~--~~~~~~~~~~~~E~  152 (341)
                       ++.++|+|||+|+.....  .+++.++++|+.++.+++++|.+ + .++|||+||.++ +...  ...    ..+++|+
T Consensus       228 -~~~~~D~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~v-G~~~~~~~~----~~~~~E~  297 (508)
T 4f6l_B          228 -LPENMDTIIHAGARTDHF--GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTE----DVTFSEA  297 (508)
T ss_dssp             -CSSCCSEEEECCCC----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCT-TSEECTTCS----CCEECTT
T ss_pred             -CccCCCEEEECCceecCC--CCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhh-ccCCccCCc----Ccccccc
Confidence             778999999999987543  23568899999999999999999 5 799999999986 2111  111    4578888


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCC---CCCchhhhhHhhHhcCccc-
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYS---STPVSVIGGLCQLTNNEYV-  228 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~-  228 (341)
                      ++...       ..+.+.|+.+|+.+|++++.+.+.|++++++||+.|||+......   ....++..+++........ 
T Consensus       298 ~~~~~-------~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  370 (508)
T 4f6l_B          298 DVYKG-------QLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIG  370 (508)
T ss_dssp             CSCSS-------BCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEE
T ss_pred             ccccc-------ccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCC
Confidence            75322       135789999999999999998767999999999999999765431   0112344555555444322 


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccC--c---------
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQE--Y---------  296 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~--~---------  296 (341)
                      ...      +.+.++|+|++|+|++++.++..+...++||++++ .+|+.|+++.+++.. ...++..  .         
T Consensus       371 ~~~------g~~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~~~~w~~~l~~~~~~  443 (508)
T 4f6l_B          371 VSM------AEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVSDESFNEILQKQDMY  443 (508)
T ss_dssp             TTG------GGSEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEECHHHHHHHHHTTCCH
T ss_pred             CCc------cCceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccCHHHHHHHHHhcCCc
Confidence            222      23389999999999999999987775669999885 599999999999754 1111100  0         


Q ss_pred             -------CCCCcceEeecchhhh----hcCCcccccHHHHHHHHHHHHHH
Q 019415          297 -------LDVPKREIKWGGTKLE----EKGFEYNYDLKMILDDSIKCGRK  335 (341)
Q Consensus       297 -------~~~~~~~~~~d~~k~~----~lg~~~~~~~~~~l~~~~~~~~~  335 (341)
                             .........+|+++.+    ++||.+...-++.++++++|+++
T Consensus       444 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~  493 (508)
T 4f6l_B          444 ETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKT  493 (508)
T ss_dssp             HHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHH
T ss_pred             cchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence                   0112346678887753    47998885567788888888865

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=6.4e-35  Score=255.14  Aligned_cols=261  Identities=13%  Similarity=0.093  Sum_probs=199.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi   84 (341)
                      |+||||||+|+||+++++.|++ |++|++++| +...          .   .+   +.+|++|++.+.+++++  +|+||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r-~~~~----------~---~~---~~~Dl~~~~~~~~~~~~~~~d~vi   62 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYN-SSEI----------Q---GG---YKLDLTDFPRLEDFIIKKRPDVII   62 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEES-SSCC----------T---TC---EECCTTSHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecC-CCcC----------C---CC---ceeccCCHHHHHHHHHhcCCCEEE
Confidence            5799999999999999999995 899999999 6532          0   12   88999999999999986  99999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... ...++..+++|+.++.+++++|.+.+ . +|||+||.+++.+ .       ..+++|+++.        
T Consensus        63 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~-~-------~~~~~e~~~~--------  124 (273)
T 2ggs_A           63 NAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDG-E-------KGNYKEEDIP--------  124 (273)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCS-S-------SCSBCTTSCC--------
T ss_pred             ECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcC-C-------CCCcCCCCCC--------
Confidence            9999765432 33456889999999999999999987 5 9999999985432 2       2367777632        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                        .+.+.|+.+|..+|.+++.     ++++++||+.+||+   .     .+...+...+..+........       .++
T Consensus       125 --~~~~~Y~~sK~~~e~~~~~-----~~~~~iR~~~v~G~---~-----~~~~~~~~~~~~~~~~~~~~~-------~~~  182 (273)
T 2ggs_A          125 --NPINYYGLSKLLGETFALQ-----DDSLIIRTSGIFRN---K-----GFPIYVYKTLKEGKTVFAFKG-------YYS  182 (273)
T ss_dssp             --CCSSHHHHHHHHHHHHHCC-----TTCEEEEECCCBSS---S-----SHHHHHHHHHHTTCCEEEESC-------EEC
T ss_pred             --CCCCHHHHHHHHHHHHHhC-----CCeEEEeccccccc---c-----HHHHHHHHHHHcCCCEEeecC-------CCC
Confidence              2367899999999999875     67899999999982   1     134444444444332211111       578


Q ss_pred             cccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCc-c--cc---CcCCCCcceEeecchhhhh-cCC
Q 019415          244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFH-I--KQ---EYLDVPKREIKWGGTKLEE-KGF  316 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~-~--~~---~~~~~~~~~~~~d~~k~~~-lg~  316 (341)
                      ++|++|+|+++..+++++. .|+||++++.+|+.|+++.+.+.++... +  +.   ...+....+..+|++|+++ |||
T Consensus       183 ~~~~~dva~~i~~~~~~~~-~g~~~i~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  261 (273)
T 2ggs_A          183 PISARKLASAILELLELRK-TGIIHVAGERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILST  261 (273)
T ss_dssp             CCBHHHHHHHHHHHHHHTC-CEEEECCCCCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSS
T ss_pred             ceEHHHHHHHHHHHHhcCc-CCeEEECCCcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCC
Confidence            9999999999999998654 6799998866999999999999985321 1  11   1123345667899999988 999


Q ss_pred             cc-cccHHHHH
Q 019415          317 EY-NYDLKMIL  326 (341)
Q Consensus       317 ~~-~~~~~~~l  326 (341)
                      +| .+++++++
T Consensus       262 ~p~~~~l~~~~  272 (273)
T 2ggs_A          262 DFYTLDLDGMV  272 (273)
T ss_dssp             CCCSCCGGGCC
T ss_pred             CCCCccccccc
Confidence            99 67788764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.2e-34  Score=267.89  Aligned_cols=270  Identities=16%  Similarity=0.152  Sum_probs=195.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC---CCeEEEEecCCCCchhhhhHhhhCCC-------------CCCceEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK---GYIVHTTLRPNLEDKSKVDLLKSLPG-------------AETRLIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~Dl~   68 (341)
                      ++|+|||||||||||++|+++|++.   |++|++++| +.........+.....             ...+++++.+|++
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR-AESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEEC-SSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEEC-CCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            5789999999999999999999999   899999999 7765443333322111             1258999999998


Q ss_pred             ------ChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCC
Q 019415           69 ------DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        69 ------~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                            +.+.+.++++++|+|||+|+....   .+++..+++|+.++.+++++|.+.+ +++|||+||.+ +|+...   
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~-v~~~~~---  222 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA---FPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTAD-VGAAIE---  222 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB---SSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGG-GGTTSC---
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC---cCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehh-hcCccC---
Confidence                  667899999999999999998776   2345789999999999999999988 89999999998 454433   


Q ss_pred             CCCCCCCCCCCCCCC-CCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCC-CCCCCCchhhhhH
Q 019415          143 AGYKDSIDETCYTPP-DHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNL-PYSSTPVSVIGGL  219 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~-~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~-~~~~~~~~~~~~~  219 (341)
                         ..+++|++...+ ....+......+.|+.+|+.+|.+++.++ +.|++++++||++|||+... .......++..++
T Consensus       223 ---~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~  299 (478)
T 4dqv_A          223 ---PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMV  299 (478)
T ss_dssp             ---TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHH
T ss_pred             ---CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHH
Confidence               456777652111 00000001123559999999999999998 46999999999999998542 2211334555555


Q ss_pred             hhHhc-Cc-ccc--ccccchhhccCCCCcccHHHHHHHHHHhhcC----CCC-CceEEEec-cc--cCHHHHHHHHHHh
Q 019415          220 CQLTN-NE-YVY--QTLRDTEEILGKLPLVHIDDVCEAHIFCMEK----PSM-SGRFFCTN-VF--VSSAEIASCLQQN  286 (341)
Q Consensus       220 ~~~~~-~~-~~~--~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~----~~~-~g~~n~~~-~~--~s~~e~~~~i~~~  286 (341)
                      ..... +. +..  ........+.+.++++|++|+|+++..++.+    +.. .++||+++ +.  +|+.|+++.+++.
T Consensus       300 ~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          300 LSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             HHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             HHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence            44332 21 111  1110000113489999999999999999875    333 44999987 44  8999999999986

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=1.5e-33  Score=254.53  Aligned_cols=233  Identities=18%  Similarity=0.239  Sum_probs=186.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-GY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++|+||||||||+||++|+++|++. |+ +|++++| +..+.....  ..+.  ..+++++.+|++|++.+.++++++|+
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r-~~~~~~~~~--~~~~--~~~v~~~~~Dl~d~~~l~~~~~~~D~   94 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR-DELKQSEMA--MEFN--DPRMRFFIGDVRDLERLNYALEGVDI   94 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES-CHHHHHHHH--HHHC--CTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC-ChhhHHHHH--HHhc--CCCEEEEECCCCCHHHHHHHHhcCCE
Confidence            4589999999999999999999999 97 9999999 654322111  1111  14799999999999999999999999


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |||+||...... .......+++|+.++.+++++|.+.+ +++|||+||..++.                          
T Consensus        95 Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~~--------------------------  147 (344)
T 2gn4_A           95 CIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAAN--------------------------  147 (344)
T ss_dssp             EEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSS--------------------------
T ss_pred             EEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccCC--------------------------
Confidence            999999865432 22345889999999999999999998 99999999976432                          


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccch
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDT  235 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  235 (341)
                           |.+.|+.+|..+|.+++.++ +   .|++++++||++|||+..       ..++.+...+..+.  ..+.++.  
T Consensus       148 -----p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-------~~i~~~~~~~~~g~~~~~i~~~~--  213 (344)
T 2gn4_A          148 -----PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-------SVVPFFKKLVQNKASEIPITDIR--  213 (344)
T ss_dssp             -----CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT-------SHHHHHHHHHHHTCCCEEESCTT--
T ss_pred             -----CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC-------CHHHHHHHHHHcCCCceEEeCCC--
Confidence                 24689999999999999987 3   589999999999999863       23566666655443  2222333  


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhC
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNY  287 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~  287 (341)
                          ..++|+|++|+|++++.++++...+.+|+++++.+|+.|+++.+.+..
T Consensus       214 ----~~r~~i~v~D~a~~v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          214 ----MTRFWITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNT  261 (344)
T ss_dssp             ----CEEEEECHHHHHHHHHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTC
T ss_pred             ----eEEeeEEHHHHHHHHHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhC
Confidence                278899999999999999987654449998877799999999999766

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=4.5e-34  Score=251.63  Aligned_cols=254  Identities=16%  Similarity=0.197  Sum_probs=193.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      |+|||||||||||+++++.|+++  |++|++++| +....   ..+..     .+++++.+|++|++.+.++++++|+||
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~---~~l~~-----~~~~~~~~D~~d~~~l~~~~~~~d~vi   71 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVR-NVEKA---STLAD-----QGVEVRHGDYNQPESLQKAFAGVSKLL   71 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEES-CTTTT---HHHHH-----TTCEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEc-CHHHH---hHHhh-----cCCeEEEeccCCHHHHHHHHhcCCEEE
Confidence            57999999999999999999999  999999999 76442   22222     268899999999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      |+|+...   .    .  +.|+.++.+++++|++.+ +++|||+||.++ +.  .                         
T Consensus        72 ~~a~~~~---~----~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~-~~--~-------------------------  113 (287)
T 2jl1_A           72 FISGPHY---D----N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFA-EE--S-------------------------  113 (287)
T ss_dssp             ECCCCCS---C----H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTG-GG--C-------------------------
T ss_pred             EcCCCCc---C----c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCC-CC--C-------------------------
Confidence            9999631   1    1  568999999999999998 999999999874 21  0                         


Q ss_pred             cchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCc
Q 019415          165 NEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL  244 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (341)
                         ...|+.+|..+|++++.   .+++++++||+.++|+...      .   .+...+..+......+      .+.+++
T Consensus       114 ---~~~y~~~K~~~E~~~~~---~~~~~~ilrp~~~~~~~~~------~---~~~~~~~~~~~~~~~~------~~~~~~  172 (287)
T 2jl1_A          114 ---IIPLAHVHLATEYAIRT---TNIPYTFLRNALYTDFFVN------E---GLRASTESGAIVTNAG------SGIVNS  172 (287)
T ss_dssp             ---CSTHHHHHHHHHHHHHH---TTCCEEEEEECCBHHHHSS------G---GGHHHHHHTEEEESCT------TCCBCC
T ss_pred             ---CCchHHHHHHHHHHHHH---cCCCeEEEECCEeccccch------h---hHHHHhhCCceeccCC------CCccCc
Confidence               13699999999999874   5799999999998886311      1   1222222333222222      238999


Q ss_pred             ccHHHHHHHHHHhhcCCCCCc-eEEEecc-ccCHHHHHHHHHHhCCCCccccCcCC-----------CCc----------
Q 019415          245 VHIDDVCEAHIFCMEKPSMSG-RFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYLD-----------VPK----------  301 (341)
Q Consensus       245 i~v~D~a~~~~~~~~~~~~~g-~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~-----------~~~----------  301 (341)
                      +|++|+|+++..+++++...| +||++++ .+|+.|+++.+.+.++. +++....+           +..          
T Consensus       173 i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (287)
T 2jl1_A          173 VTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGK-KVVHQPVSFEEEKNFLVNAGVPEPFTEITAAI  251 (287)
T ss_dssp             BCHHHHHHHHHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSS-CCEEEECCHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCC-cceEEeCCHHHHHHHHHhCCCCHHHHHHHHHH
Confidence            999999999999998765445 9999885 69999999999998853 22211111           000          


Q ss_pred             ------ceEeecchhhhh-cCCcccccHHHHHHHHHH
Q 019415          302 ------REIKWGGTKLEE-KGFEYNYDLKMILDDSIK  331 (341)
Q Consensus       302 ------~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~  331 (341)
                            .....|++++++ ||  |.++++++|+++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          252 YDAISKGEASKTSDDLQKLIG--SLTPLKETVKQALK  286 (287)
T ss_dssp             HHHHHTTTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred             HHHHhCCCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence                  234568899988 99  66699999999875

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=2.1e-33  Score=244.81  Aligned_cols=235  Identities=16%  Similarity=0.139  Sum_probs=187.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+||||||+||||++|++.|++.|++|++++| +....           ...+++++.+|++|++.+.++++++|+|||
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~-----------~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~   69 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDI-VDLGA-----------AEAHEEIVACDLADAQAVHDLVKDCDGIIH   69 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCS-SCCCC-----------CCTTEEECCCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-CCccc-----------cCCCccEEEccCCCHHHHHHHHcCCCEEEE
Confidence            368999999999999999999999999999999 65431           113678999999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +|+....   ..++..+++|+.++.++++++.+.+ +++|||+||..++.+...      ..+++|+++.          
T Consensus        70 ~a~~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~------~~~~~E~~~~----------  129 (267)
T 3ay3_A           70 LGGVSVE---RPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPR------TTRIDTEVPR----------  129 (267)
T ss_dssp             CCSCCSC---CCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBT------TSCBCTTSCC----------
T ss_pred             CCcCCCC---CCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCC------CCCCCCCCCC----------
Confidence            9997632   2356889999999999999999988 899999999985543222      4577887633          


Q ss_pred             chhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCc
Q 019415          166 EYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL  244 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (341)
                      .+.+.|+.+|..+|.+++.+. +.+++++++||+.+|+..   .                      ....      .+++
T Consensus       130 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~---~----------------------~~~~------~~~~  178 (267)
T 3ay3_A          130 RPDSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKP---K----------------------DARM------MATW  178 (267)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSC---C----------------------SHHH------HHHB
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCC---C----------------------CCCe------eecc
Confidence            236789999999999999887 679999999999998421   0                      0011      5679


Q ss_pred             ccHHHHHHHHHHhhcCCCCC-ceEEEeccccCHHHHHHHHHHhCCCCccccCcCCCCcceEeecchhhhhcCCcccccHH
Q 019415          245 VHIDDVCEAHIFCMEKPSMS-GRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLK  323 (341)
Q Consensus       245 i~v~D~a~~~~~~~~~~~~~-g~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~~~~~~~  323 (341)
                      +|++|+|+++..+++.+... ++|++.++.                            ...+.|..+++.|||+|+++++
T Consensus       179 ~~~~dva~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~d~~~~~~lg~~p~~~~~  230 (267)
T 3ay3_A          179 LSVDDFMRLMKRAFVAPKLGCTVVYGASAN----------------------------TESWWDNDKSAFLGWVPQDSSE  230 (267)
T ss_dssp             CCHHHHHHHHHHHHHSSCCCEEEEEECCSC----------------------------SSCCBCCGGGGGGCCCCCCCGG
T ss_pred             ccHHHHHHHHHHHHhCCCCCceeEecCCCc----------------------------cccccCHHHHHHcCCCCCCCHH
Confidence            99999999999999876543 477765421                            1224677777449999999999


Q ss_pred             HHHHHHHH
Q 019415          324 MILDDSIK  331 (341)
Q Consensus       324 ~~l~~~~~  331 (341)
                      ++++++++
T Consensus       231 ~~~~~~~~  238 (267)
T 3ay3_A          231 IWREEIEQ  238 (267)
T ss_dssp             GGHHHHHH
T ss_pred             HHHHHHHh
Confidence            99988865

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=1.4e-33  Score=248.27  Aligned_cols=254  Identities=15%  Similarity=0.181  Sum_probs=186.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|||||||||||+++++.|+++  |++|++++| +..+..   .+..     .+++++.+|++|++++.++++++|+|||
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r-~~~~~~---~~~~-----~~~~~~~~D~~d~~~~~~~~~~~d~vi~   71 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVR-NPAKAQ---ALAA-----QGITVRQADYGDEAALTSALQGVEKLLL   71 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEES-CTTTCH---HHHH-----TTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEc-ChHhhh---hhhc-----CCCeEEEcCCCCHHHHHHHHhCCCEEEE
Confidence            5899999999999999999998  999999999 765422   2222     2678999999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +|+...           ..|+.++.+++++|++.+ +++|||+||.++ ++  .                          
T Consensus        72 ~a~~~~-----------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~-~~--~--------------------------  110 (286)
T 2zcu_A           72 ISSSEV-----------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHA-DT--S--------------------------  110 (286)
T ss_dssp             CC-------------------CHHHHHHHHHHHHT-CCEEEEEEETTT-TT--C--------------------------
T ss_pred             eCCCCc-----------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCC-CC--C--------------------------
Confidence            998521           147889999999999998 999999999874 21  0                          


Q ss_pred             chhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          166 EYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                        ...|+.+|..+|++++.   .+++++++||+.++++..          ..+...+..+...++.+      .+.++++
T Consensus       111 --~~~y~~sK~~~e~~~~~---~~~~~~ilrp~~~~~~~~----------~~~~~~~~~~~~~~~~~------~~~~~~i  169 (286)
T 2zcu_A          111 --PLGLADEHIETEKMLAD---SGIVYTLLRNGWYSENYL----------ASAPAALEHGVFIGAAG------DGKIASA  169 (286)
T ss_dssp             --CSTTHHHHHHHHHHHHH---HCSEEEEEEECCBHHHHH----------TTHHHHHHHTEEEESCT------TCCBCCB
T ss_pred             --cchhHHHHHHHHHHHHH---cCCCeEEEeChHHhhhhH----------HHhHHhhcCCceeccCC------CCccccc
Confidence              14699999999999875   479999999987766521          11222222232222222      3389999


Q ss_pred             cHHHHHHHHHHhhcCCCCCc-eEEEecc-ccCHHHHHHHHHHhCCCCccccCcCC-----------CCc-----------
Q 019415          246 HIDDVCEAHIFCMEKPSMSG-RFFCTNV-FVSSAEIASCLQQNYPEFHIKQEYLD-----------VPK-----------  301 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~~~~g-~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~-----------~~~-----------  301 (341)
                      |++|+|+++..++.++...| +||++++ .+|+.|+++.+.+.++.. ++....+           +..           
T Consensus       170 ~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (286)
T 2zcu_A          170 TRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQ-VTYQNLSEADFAAALKSVGLPDGLADMLADSD  248 (286)
T ss_dssp             CHHHHHHHHHHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSC-CEEEECCHHHHHHHHTTSSCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCC-CceeeCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            99999999999998765444 9999986 699999999999988532 2111110           100           


Q ss_pred             -----ceEeecchhhhh-cCCcccccHHHHHHHHHHHHH
Q 019415          302 -----REIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGR  334 (341)
Q Consensus       302 -----~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~  334 (341)
                           .....|++++++ |||.+. +++++|+++++|+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~lg~~~~-~~~e~l~~~~~~~~  286 (286)
T 2zcu_A          249 VGASKGGLFDDSKTLSKLIGHPTT-TLAESVSHLFNVNN  286 (286)
T ss_dssp             HHHHTTTTCCCCCHHHHHHTSCCC-CHHHHHHGGGC---
T ss_pred             HHHhCCCCccCchHHHHHhCcCCC-CHHHHHHHHHhhcC
Confidence                 124567889988 998555 99999999998873

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=5.4e-33  Score=235.10  Aligned_cols=209  Identities=17%  Similarity=0.193  Sum_probs=171.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHhcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAIQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~Vi~   85 (341)
                      |+||||||+|+||+++++.|+++|++|++++| +..+..      .    ..+++++.+|++| ++++.++++++|+|||
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~------~----~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~   69 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR-KVEQVP------Q----YNNVKAVHFDVDWTPEEMAKQLHGMDAIIN   69 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEES-SGGGSC------C----CTTEEEEECCTTSCHHHHHTTTTTCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-Cccchh------h----cCCceEEEecccCCHHHHHHHHcCCCEEEE
Confidence            68999999999999999999999999999999 754311      1    1489999999999 9999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +|+....       ..+++|+.++.+++++|++.+ +++|||+||.+++.          ..+..| +          ..
T Consensus        70 ~ag~~~~-------~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~----------~~~~~e-~----------~~  120 (219)
T 3dqp_A           70 VSGSGGK-------SLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQ----------PEKWIG-A----------GF  120 (219)
T ss_dssp             CCCCTTS-------SCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTC----------GGGCCS-H----------HH
T ss_pred             CCcCCCC-------CcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccC----------CCcccc-c----------cc
Confidence            9998652       477889999999999999998 99999999987433          123333 1          13


Q ss_pred             chhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          166 EYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                      .+.+.|+.+|..+|++++  .+.+++++++||+.+||+.....      ..            ++  ..      .++++
T Consensus       121 ~~~~~Y~~sK~~~e~~~~--~~~~i~~~ilrp~~v~g~~~~~~------~~------------~~--~~------~~~~i  172 (219)
T 3dqp_A          121 DALKDYYIAKHFADLYLT--KETNLDYTIIQPGALTEEEATGL------ID------------IN--DE------VSASN  172 (219)
T ss_dssp             HHTHHHHHHHHHHHHHHH--HSCCCEEEEEEECSEECSCCCSE------EE------------ES--SS------CCCCE
T ss_pred             ccccHHHHHHHHHHHHHH--hccCCcEEEEeCceEecCCCCCc------cc------------cC--CC------cCCcc
Confidence            457899999999999996  25589999999999999864432      10            11  22      88999


Q ss_pred             cHHHHHHHHHHhhcCCCCCc-eEEEeccccCHHHHHHHH
Q 019415          246 HIDDVCEAHIFCMEKPSMSG-RFFCTNVFVSSAEIASCL  283 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~~~~g-~~n~~~~~~s~~e~~~~i  283 (341)
                      +++|+|+++..++.++...| +||++++..++.|+.+.-
T Consensus       173 ~~~Dva~~i~~~l~~~~~~g~~~~i~~g~~~~~e~~~~~  211 (219)
T 3dqp_A          173 TIGDVADTIKELVMTDHSIGKVISMHNGKTAIKEALESL  211 (219)
T ss_dssp             EHHHHHHHHHHHHTCGGGTTEEEEEEECSEEHHHHHHTT
T ss_pred             cHHHHHHHHHHHHhCccccCcEEEeCCCCccHHHHHHHH
Confidence            99999999999999876545 999988889999988653

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=4.1e-32  Score=232.33  Aligned_cols=214  Identities=22%  Similarity=0.220  Sum_probs=170.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCce-EEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRL-IFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++|+||||||||+||+++++.|+++|++|++++| +...   ...+..     .++ +++.+|++  +.+.++++++|+|
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R-~~~~---~~~~~~-----~~~~~~~~~Dl~--~~~~~~~~~~D~v   88 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVR-NEEQ---GPELRE-----RGASDIVVANLE--EDFSHAFASIDAV   88 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SGGG---HHHHHH-----TTCSEEEECCTT--SCCGGGGTTCSEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEEC-ChHH---HHHHHh-----CCCceEEEcccH--HHHHHHHcCCCEE
Confidence            5789999999999999999999999999999999 7654   222222     267 89999999  7788889999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+|+.....   .++..+++|+.++.+++++|++.+ +++|||+||.++..+              |.++         
T Consensus        89 i~~ag~~~~~---~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~--------------~~~~---------  141 (236)
T 3e8x_A           89 VFAAGSGPHT---GADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDP--------------DQGP---------  141 (236)
T ss_dssp             EECCCCCTTS---CHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCG--------------GGSC---------
T ss_pred             EECCCCCCCC---CccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCC--------------CCCh---------
Confidence            9999976543   356889999999999999999998 999999999653221              1110         


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                        .+...|+.+|..+|.+++   +.+++++++||+.++|+.....      .           .......      +.++
T Consensus       142 --~~~~~Y~~sK~~~e~~~~---~~gi~~~~lrpg~v~~~~~~~~------~-----------~~~~~~~------~~~~  193 (236)
T 3e8x_A          142 --MNMRHYLVAKRLADDELK---RSSLDYTIVRPGPLSNEESTGK------V-----------TVSPHFS------EITR  193 (236)
T ss_dssp             --GGGHHHHHHHHHHHHHHH---HSSSEEEEEEECSEECSCCCSE------E-----------EEESSCS------CCCC
T ss_pred             --hhhhhHHHHHHHHHHHHH---HCCCCEEEEeCCcccCCCCCCe------E-----------EeccCCC------cccC
Confidence              246899999999999987   4589999999999999854332      1           0011111      2689


Q ss_pred             cccHHHHHHHHHHhhcCCCCCc-eEEEeccccCHHHHHHHHH
Q 019415          244 LVHIDDVCEAHIFCMEKPSMSG-RFFCTNVFVSSAEIASCLQ  284 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~~s~~e~~~~i~  284 (341)
                      +++++|+|+++..+++++...| +||++++.+++.|+++.++
T Consensus       194 ~i~~~Dva~~~~~~~~~~~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          194 SITRHDVAKVIAELVDQQHTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             CEEHHHHHHHHHHHTTCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             cEeHHHHHHHHHHHhcCccccCCeEEEeCCCcCHHHHHHHhc
Confidence            9999999999999999875555 9999888899999998765

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=3.1e-32  Score=248.50  Aligned_cols=210  Identities=21%  Similarity=0.226  Sum_probs=178.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      |||||||||||||++|+++|+++|+ +|++++| +                           .+++.+.++++++|+|||
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~-~---------------------------~d~~~l~~~~~~~d~Vih   52 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHR-Q---------------------------TKEEELESALLKADFIVH   52 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCT-T---------------------------CCHHHHHHHHHHCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECC-C---------------------------CCHHHHHHHhccCCEEEE
Confidence            6899999999999999999999998 9988777 2                           578899999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcC-EEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK-RLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      +|+......   ....++.|+.++.+++++|++.+ ++ +|||+||..+ ++                            
T Consensus        53 ~a~~~~~~~---~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~-~~----------------------------   99 (369)
T 3st7_A           53 LAGVNRPEH---DKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQA-TQ----------------------------   99 (369)
T ss_dssp             CCCSBCTTC---STTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGG-GS----------------------------
T ss_pred             CCcCCCCCC---HHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhh-cC----------------------------
Confidence            999876532   34788999999999999999998 76 9999999984 31                            


Q ss_pred             cchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhccCCC
Q 019415          165 NEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEILGKL  242 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  242 (341)
                         .+.|+.+|..+|++++.++ +.+++++++||+++||++....  ...++..++..+..+. ..+.++.      +.+
T Consensus       100 ---~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~~~  168 (369)
T 3st7_A          100 ---DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPN--YNSVIATFCYKIARNEEIQVNDRN------VEL  168 (369)
T ss_dssp             ---CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT--SSCHHHHHHHHHHTTCCCCCSCTT------CEE
T ss_pred             ---CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCC--cchHHHHHHHHHHcCCCeEecCCC------eEE
Confidence               2689999999999999988 5699999999999999987765  4556777777766655 3333333      389


Q ss_pred             CcccHHHHHHHHHHhhcCCCC--CceEEEecc-ccCHHHHHHHHHHhCC
Q 019415          243 PLVHIDDVCEAHIFCMEKPSM--SGRFFCTNV-FVSSAEIASCLQQNYP  288 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~--~g~~n~~~~-~~s~~e~~~~i~~~~~  288 (341)
                      +++|++|+|+++..+++++..  .++||++++ .+|+.|+++.+++.++
T Consensus       169 ~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g  217 (369)
T 3st7_A          169 TLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQ  217 (369)
T ss_dssp             EEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHH
T ss_pred             EEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhC
Confidence            999999999999999998776  569999874 6999999999999874

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=4.4e-31  Score=238.76  Aligned_cols=272  Identities=13%  Similarity=0.101  Sum_probs=189.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC-chhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE-DKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      +|+|||||||||||++|++.|++.|++|++++| +.. ...+...+..+.  ..+++++.+|++|++.+.++++  ++|+
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~~d~   86 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILAR-PGPRSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHEIDI   86 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEEC-SSCCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTTCCE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEEC-CCCCChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCCCCE
Confidence            468999999999999999999999999999999 662 222333222221  1489999999999999999999  9999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |||+|+..              |+.++.+++++|++.+++++||+ |+.+              ...+|.+.        
T Consensus        87 Vi~~a~~~--------------n~~~~~~l~~aa~~~g~v~~~v~-S~~g--------------~~~~e~~~--------  129 (346)
T 3i6i_A           87 VVSTVGGE--------------SILDQIALVKAMKAVGTIKRFLP-SEFG--------------HDVNRADP--------  129 (346)
T ss_dssp             EEECCCGG--------------GGGGHHHHHHHHHHHCCCSEEEC-SCCS--------------SCTTTCCC--------
T ss_pred             EEECCchh--------------hHHHHHHHHHHHHHcCCceEEee-cccC--------------CCCCccCc--------
Confidence            99999862              78889999999999987899986 4321              12333331        


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhccCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEILGK  241 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  241 (341)
                        ..+.+.|+.+|..+|++++.   .|++++++||+.++|......      ............ ..+++      +.+.
T Consensus       130 --~~p~~~y~~sK~~~e~~l~~---~g~~~tivrpg~~~g~~~~~~------~~~~~~~~~~~~~~~~g~------g~~~  192 (346)
T 3i6i_A          130 --VEPGLNMYREKRRVRQLVEE---SGIPFTYICCNSIASWPYYNN------IHPSEVLPPTDFFQIYGD------GNVK  192 (346)
T ss_dssp             --CTTHHHHHHHHHHHHHHHHH---TTCCBEEEECCEESSCCCSCC-----------CCCCSSCEEEETT------SCCC
T ss_pred             --CCCcchHHHHHHHHHHHHHH---cCCCEEEEEecccccccCccc------cccccccCCCceEEEccC------CCce
Confidence              23468999999999999985   579999999999999753322      111111111111 33333      3348


Q ss_pred             CCcccHHHHHHHHHHhhcCCCC-CceEEEec--cccCHHHHHHHHHHhCCCCccccCcC---------------------
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSM-SGRFFCTN--VFVSSAEIASCLQQNYPEFHIKQEYL---------------------  297 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~-~g~~n~~~--~~~s~~e~~~~i~~~~~~~~~~~~~~---------------------  297 (341)
                      ++|+|++|+|+++..++..+.. +++|++++  +.+|+.|+++.+++.++. +++....                     
T Consensus       193 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~  271 (346)
T 3i6i_A          193 AYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR-TLPRVTVTEDDLLAAAGENIIPQSVVAA  271 (346)
T ss_dssp             EEEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTS-CCCEEEECHHHHHHHHHTCCTTHHHHHH
T ss_pred             EEecCHHHHHHHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCC-CCceEecCHHHHHHHHhcCCChhhhHHH
Confidence            9999999999999999998765 34788763  569999999999998743 2221110                     


Q ss_pred             -------CCCcceEee---cchhhhh--cCCcccccHHHHHHHHHHHHHHc
Q 019415          298 -------DVPKREIKW---GGTKLEE--KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       298 -------~~~~~~~~~---d~~k~~~--lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                             .+....+.+   +..++++  -+++++ ++++.++++++|++.+
T Consensus       272 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~  321 (346)
T 3i6i_A          272 FTHDIFIKGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEK  321 (346)
T ss_dssp             HHHHHHTTCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC----
T ss_pred             HHHHHhccCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhcc
Confidence                   001000111   1122333  377777 9999999999998764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=1.2e-30  Score=227.38  Aligned_cols=208  Identities=14%  Similarity=0.125  Sum_probs=170.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+||||||+|+||++|++.|++.|++|++++| +...           ....+++++.+|++|++.+.++++++|+|||
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r-~~~~-----------~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~   70 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADL-SPLD-----------PAGPNEECVQCDLADANAVNAMVAGCDGIVH   70 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEES-SCCC-----------CCCTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEec-CCcc-----------ccCCCCEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            468999999999999999999999999999999 7643           1135899999999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +||....   .+++.++++|+.++.++++++++.+ .++|||+||..+++....      ..+++|+...          
T Consensus        71 ~Ag~~~~---~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~------~~~~~e~~~~----------  130 (267)
T 3rft_A           71 LGGISVE---KPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQ------TERLGPDVPA----------  130 (267)
T ss_dssp             CCSCCSC---CCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBT------TSCBCTTSCC----------
T ss_pred             CCCCcCc---CCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCC------CCCCCCCCCC----------
Confidence            9998433   3467899999999999999999998 899999999986543333      4567777633          


Q ss_pred             chhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCc
Q 019415          166 EYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL  244 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (341)
                      .+.+.|+.||..+|.+++.++ +++++++++||+.|+|+.....                         .      .++|
T Consensus       131 ~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~~-------------------------~------~~~~  179 (267)
T 3rft_A          131 RPDGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNYR-------------------------M------LSTW  179 (267)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCSTT-------------------------H------HHHB
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCCC-------------------------c------eeeE
Confidence            336889999999999999888 6799999999999998742221                         1      4568


Q ss_pred             ccHHHHHHHHHHhhcCCCCCc-eEEEec-cccCH
Q 019415          245 VHIDDVCEAHIFCMEKPSMSG-RFFCTN-VFVSS  276 (341)
Q Consensus       245 i~v~D~a~~~~~~~~~~~~~g-~~n~~~-~~~s~  276 (341)
                      ++++|+++++..+++.+...+ ++++.+ +..++
T Consensus       180 ~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~~~~~  213 (267)
T 3rft_A          180 FSHDDFVSLIEAVFRAPVLGCPVVWGASANDAGW  213 (267)
T ss_dssp             CCHHHHHHHHHHHHHCSCCCSCEEEECCCCTTCC
T ss_pred             EcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCCc
Confidence            999999999999998876654 666654 43443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.97  E-value=1.4e-30  Score=220.84  Aligned_cols=213  Identities=11%  Similarity=0.039  Sum_probs=160.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      ||||||||||+||++|++.|+++|++|++++| +..+   ...+.     ..+++++.+|++|++.  +.+.++|+|||+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~---~~~~~-----~~~~~~~~~D~~d~~~--~~~~~~d~vi~~   69 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVR-DPQK---AADRL-----GATVATLVKEPLVLTE--ADLDSVDAVVDA   69 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHT-----CTTSEEEECCGGGCCH--HHHTTCSEEEEC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEe-cccc---ccccc-----CCCceEEecccccccH--hhcccCCEEEEC
Confidence            68999999999999999999999999999999 6533   22221     1478999999999887  788999999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNE  166 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  166 (341)
                      |+.....      ...+.|+.++.+++++|++.+  ++|||+||.+++++.....    ..+.+|..          ...
T Consensus        70 ag~~~~~------~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~----~~~~~~~~----------~~~  127 (224)
T 3h2s_A           70 LSVPWGS------GRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADH----PMILDFPE----------SAA  127 (224)
T ss_dssp             CCCCTTS------SCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSS----CGGGGCCG----------GGG
T ss_pred             CccCCCc------chhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCc----cccccCCC----------CCc
Confidence            9986321      335679999999999999987  8999999998777543311    12333332          123


Q ss_pred             hhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          167 YLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       167 ~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                      +.+.|+.+|..+|. +..+. +.+++++++||+.+||++....     +.       ..... +....      ..++++
T Consensus       128 ~~~~y~~sK~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~-----~~-------~~~~~-~~~~~------~~~~~i  187 (224)
T 3h2s_A          128 SQPWYDGALYQYYE-YQFLQMNANVNWIGISPSEAFPSGPATS-----YV-------AGKDT-LLVGE------DGQSHI  187 (224)
T ss_dssp             GSTTHHHHHHHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCC-----EE-------EESSB-CCCCT------TSCCBC
T ss_pred             cchhhHHHHHHHHH-HHHHHhcCCCcEEEEcCccccCCCcccC-----ce-------ecccc-cccCC------CCCceE
Confidence            46889999999994 45555 6799999999999999843211     00       01111 11111      267899


Q ss_pred             cHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          246 HIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      +++|+|++++.+++++...| +|++++.
T Consensus       188 ~~~DvA~~~~~~l~~~~~~g~~~~~~~~  215 (224)
T 3h2s_A          188 TTGNMALAILDQLEHPTAIRDRIVVRDA  215 (224)
T ss_dssp             CHHHHHHHHHHHHHSCCCTTSEEEEEEC
T ss_pred             eHHHHHHHHHHHhcCccccCCEEEEecC
Confidence            99999999999999887655 9999873

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.97  E-value=1.5e-30  Score=224.67  Aligned_cols=228  Identities=18%  Similarity=0.145  Sum_probs=171.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++|+||||||+|+||+++++.|+++  |++|++++| +..+   ...+      ..+++++.+|++|++++.++++++|+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r-~~~~---~~~~------~~~~~~~~~D~~d~~~~~~~~~~~d~   72 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQG---KEKI------GGEADVFIGDITDADSINPAFQGIDA   72 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES-CHHH---HHHT------TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc-CCCc---hhhc------CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence            4689999999999999999999999  899999999 6532   2222      23678999999999999999999999


Q ss_pred             EEEeccCCccc-----------c---chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHI-----------D---GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        83 Vi~~a~~~~~~-----------~---~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      |||+|+.....           .   .+..+..+++|+.++.++++++++.+ +++|||+||..+..+.         .+
T Consensus        73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~---------~~  142 (253)
T 1xq6_A           73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPD---------HP  142 (253)
T ss_dssp             EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTT---------CG
T ss_pred             EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCCC---------Cc
Confidence            99999975421           0   11122467999999999999999998 8999999998742210         00


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV  228 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (341)
                      .              .....+.|+.+|..+|.+++.   .+++++++||+.+||+.....    .....      .....
T Consensus       143 ~--------------~~~~~~~y~~sK~~~e~~~~~---~~i~~~~vrpg~v~~~~~~~~----~~~~~------~~~~~  195 (253)
T 1xq6_A          143 L--------------NKLGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVR----ELLVG------KDDEL  195 (253)
T ss_dssp             G--------------GGGGGCCHHHHHHHHHHHHHT---SSSCEEEEEECEEECSCSSSS----CEEEE------STTGG
T ss_pred             c--------------ccccchhHHHHHHHHHHHHHh---CCCceEEEecceeecCCcchh----hhhcc------CCcCC
Confidence            0              011124588899999998874   579999999999999864321    11100      00011


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc----ccCHHHHHHHHHHhCC
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV----FVSSAEIASCLQQNYP  288 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~----~~s~~e~~~~i~~~~~  288 (341)
                      +.         ...++++++|+|+++..+++++...| +||++++    .+|+.|+++.+++.++
T Consensus       196 ~~---------~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g  251 (253)
T 1xq6_A          196 LQ---------TDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  251 (253)
T ss_dssp             GG---------SSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCC
T ss_pred             cC---------CCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhC
Confidence            11         14679999999999999998765544 8999874    3899999999998875

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=1.9e-30  Score=228.65  Aligned_cols=253  Identities=13%  Similarity=0.194  Sum_probs=181.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      |+||||||||+||+++++.|++. |++|++++| +..+.   ..+.     ..+++++.+|++|++.+.++++++|+|||
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R-~~~~~---~~~~-----~~~v~~~~~D~~d~~~l~~~~~~~d~vi~   71 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVR-NVEKV---PDDW-----RGKVSVRQLDYFNQESMVEAFKGMDTVVF   71 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEES-SGGGS---CGGG-----BTTBEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEEC-CHHHH---HHhh-----hCCCEEEEcCCCCHHHHHHHHhCCCEEEE
Confidence            67999999999999999999998 999999999 76431   1111     24799999999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +|+.....         ..|+.++.+++++|++.+ +++|||+||.+...   .       .+                 
T Consensus        72 ~a~~~~~~---------~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~~---~-------~~-----------------  114 (289)
T 3e48_A           72 IPSIIHPS---------FKRIPEVENLVYAAKQSG-VAHIIFIGYYADQH---N-------NP-----------------  114 (289)
T ss_dssp             CCCCCCSH---------HHHHHHHHHHHHHHHHTT-CCEEEEEEESCCST---T-------CC-----------------
T ss_pred             eCCCCccc---------hhhHHHHHHHHHHHHHcC-CCEEEEEcccCCCC---C-------CC-----------------
Confidence            99875432         237899999999999999 99999999954210   0       00                 


Q ss_pred             chhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          166 EYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                         ..+...+..+|+.+.   +.|++++++||+.++|+.          ...+..........++.++      +.++|+
T Consensus       115 ---~~~~~~~~~~e~~~~---~~g~~~~ilrp~~~~~~~----------~~~~~~~~~~~~~~~~~g~------~~~~~i  172 (289)
T 3e48_A          115 ---FHMSPYFGYASRLLS---TSGIDYTYVRMAMYMDPL----------KPYLPELMNMHKLIYPAGD------GRINYI  172 (289)
T ss_dssp             ---STTHHHHHHHHHHHH---HHCCEEEEEEECEESTTH----------HHHHHHHHHHTEECCCCTT------CEEEEE
T ss_pred             ---CccchhHHHHHHHHH---HcCCCEEEEecccccccc----------HHHHHHHHHCCCEecCCCC------ceeeeE
Confidence               012222335555555   347999999999999872          2222233333333333333      388999


Q ss_pred             cHHHHHHHHHHhhcCCCCCc-eEEEeccccCHHHHHHHHHHhCCCCccccCcC------------CC------------C
Q 019415          246 HIDDVCEAHIFCMEKPSMSG-RFFCTNVFVSSAEIASCLQQNYPEFHIKQEYL------------DV------------P  300 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~~~~g-~~n~~~~~~s~~e~~~~i~~~~~~~~~~~~~~------------~~------------~  300 (341)
                      +++|+|+++..++..+...| +||++++.+|+.|+++.+++.++. +++....            .+            .
T Consensus       173 ~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  251 (289)
T 3e48_A          173 TRNDIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEASGT-EIKYEPVSLETFAEMYDEPKGFGALLASMYHAGA  251 (289)
T ss_dssp             CHHHHHHHHHHHHHCGGGTTCEEEECCEEEEHHHHHHHHHHHHTS-CCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHcCCCcCCceEEeCCCcCCHHHHHHHHHHHHCC-ceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence            99999999999998876534 999995569999999999998743 2211110            01            1


Q ss_pred             cceEeecchhhhh-cCCcccccHHHHHHHH
Q 019415          301 KREIKWGGTKLEE-KGFEYNYDLKMILDDS  329 (341)
Q Consensus       301 ~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~  329 (341)
                      ......+++.+++ +|++|+ ++++-+++.
T Consensus       252 ~g~~~~~~~~~~~~~G~~p~-~~~~~~~~~  280 (289)
T 3e48_A          252 RGLLDQESNDFKQLVNDQPQ-TLQSFLQEN  280 (289)
T ss_dssp             TTTTCCCCSHHHHHHSSCCC-CHHHHHHC-
T ss_pred             CCCccccCchHHHHhCCCCC-CHHHHHHHH
Confidence            1122345556666 899888 888876654

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.97  E-value=1.7e-30  Score=219.89  Aligned_cols=216  Identities=11%  Similarity=0.099  Sum_probs=146.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      ||||||||||+||++|++.|+++|++|++++| +...   ...+.      .+++++.+|++|++.  +.+.++|+|||+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~---~~~~~------~~~~~~~~D~~d~~~--~~~~~~d~vi~~   68 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVR-NAGK---ITQTH------KDINILQKDIFDLTL--SDLSDQNVVVDA   68 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CSHH---HHHHC------SSSEEEECCGGGCCH--HHHTTCSEEEEC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEc-Cchh---hhhcc------CCCeEEeccccChhh--hhhcCCCEEEEC
Confidence            68999999999999999999999999999999 7643   22221      378999999999887  788999999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNE  166 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  166 (341)
                      |+....        ..+.|+.++.++++++++.+ .+++|++||..++++...      ..+..|++.          ..
T Consensus        69 ag~~~~--------~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~------~~~~~~~~~----------~~  123 (221)
T 3ew7_A           69 YGISPD--------EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDED------GNTLLESKG----------LR  123 (221)
T ss_dssp             CCSSTT--------TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC----------------------------------
T ss_pred             CcCCcc--------ccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCC------CccccccCC----------CC
Confidence            998432        34668999999999999998 899999999987775443      234444431          13


Q ss_pred             hhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          167 YLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       167 ~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                      +.+.|+.+|..+|.+..... +.+++++++||+.+||+.....    .+     .  ...........       ..+++
T Consensus       124 ~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~~~~----~~-----~--~~~~~~~~~~~-------~~~~i  185 (221)
T 3ew7_A          124 EAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTG----DY-----Q--IGKDHLLFGSD-------GNSFI  185 (221)
T ss_dssp             -CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCCCCC---------------------------------------CC
T ss_pred             CHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcceecCCCccC----ce-----E--eccccceecCC-------CCceE
Confidence            35779999999998733222 5689999999999999833221    10     0  01111111111       34699


Q ss_pred             cHHHHHHHHHHhhcCCCCCc-eEEEecc-ccCHH
Q 019415          246 HIDDVCEAHIFCMEKPSMSG-RFFCTNV-FVSSA  277 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~~~~g-~~n~~~~-~~s~~  277 (341)
                      +++|+|++++.+++++...| +||+++. ..+..
T Consensus       186 ~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~~~~  219 (221)
T 3ew7_A          186 SMEDYAIAVLDEIERPNHLNEHFTVAGKLEHHHH  219 (221)
T ss_dssp             CHHHHHHHHHHHHHSCSCTTSEEECCC-------
T ss_pred             eHHHHHHHHHHHHhCccccCCEEEECCCCccccc
Confidence            99999999999999887655 9999874 34443

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=5.4e-30  Score=226.92  Aligned_cols=224  Identities=17%  Similarity=0.174  Sum_probs=170.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      +|+||||||||+||+++++.|+++| ++|++++| +.... ....+..     .+++++.+|++|++.+.++++++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R-~~~~~-~~~~l~~-----~~~~~~~~D~~d~~~l~~~~~~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR-NPRKK-AAKELRL-----QGAEVVQGDQDDQVIMELALNGAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES-CTTSH-HHHHHHH-----TTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc-CCCCH-HHHHHHH-----CCCEEEEecCCCHHHHHHHHhcCCEEE
Confidence            4799999999999999999999999 99999999 76542 1222222     368899999999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      |+++....       ...+.|+.++.+++++|++.+ +++|||+|+.. +++...            .            
T Consensus        78 ~~a~~~~~-------~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~-~~~~~~------------~------------  124 (299)
T 2wm3_A           78 IVTNYWES-------CSQEQEVKQGKLLADLARRLG-LHYVVYSGLEN-IKKLTA------------G------------  124 (299)
T ss_dssp             ECCCHHHH-------TCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCC-HHHHTT------------T------------
T ss_pred             EeCCCCcc-------ccchHHHHHHHHHHHHHHHcC-CCEEEEEcCcc-ccccCC------------C------------
Confidence            99985321       123567889999999999998 99999988766 442111            0            


Q ss_pred             cchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc---cccccccchhhccCC
Q 019415          165 NEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE---YVYQTLRDTEEILGK  241 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  241 (341)
                       .+...|+.+|..+|++++.   .|++++++||+.+||+.....      ...   ....+.   ..++.      +.+.
T Consensus       125 -~~~~~y~~sK~~~e~~~~~---~gi~~~ilrp~~~~~~~~~~~------~~~---~~~~g~~~~~~~~~------~~~~  185 (299)
T 2wm3_A          125 -RLAAAHFDGKGEVEEYFRD---IGVPMTSVRLPCYFENLLSHF------LPQ---KAPDGKSYLLSLPT------GDVP  185 (299)
T ss_dssp             -SCCCHHHHHHHHHHHHHHH---HTCCEEEEECCEEGGGGGTTT------CCE---ECTTSSSEEECCCC------TTSC
T ss_pred             -cccCchhhHHHHHHHHHHH---CCCCEEEEeecHHhhhchhhc------CCc---ccCCCCEEEEEecC------CCCc
Confidence             1136799999999999985   379999999999999743211      110   011111   11111      2338


Q ss_pred             CCcccHHHHHHHHHHhhcCCC--CCceEEEeccccCHHHHHHHHHHhCC
Q 019415          242 LPLVHIDDVCEAHIFCMEKPS--MSGRFFCTNVFVSSAEIASCLQQNYP  288 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~--~~g~~n~~~~~~s~~e~~~~i~~~~~  288 (341)
                      ++|+|++|+|+++..++.++.  .+.+|+++++.+|+.|+++.+.+.++
T Consensus       186 ~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g  234 (299)
T 2wm3_A          186 MDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTR  234 (299)
T ss_dssp             EEEECGGGHHHHHHHHHHSHHHHTTCEEECCSEEECHHHHHHHHHHHHS
T ss_pred             cceecHHHHHHHHHHHHcChhhhCCeEEEeeeccCCHHHHHHHHHHHHC
Confidence            899999999999999998642  23489998877999999999999874

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.96  E-value=3.6e-30  Score=216.92  Aligned_cols=204  Identities=13%  Similarity=0.036  Sum_probs=158.3

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |+. ++|+||||||+|+||+++++.|+++|+  +|++++| +...            ...+++++.+|+++++.+.+++ 
T Consensus         1 M~~-~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r-~~~~------------~~~~~~~~~~D~~~~~~~~~~~-   65 (215)
T 2a35_A            1 MHS-TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR-KALA------------EHPRLDNPVGPLAELLPQLDGS-   65 (215)
T ss_dssp             ----CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS-SCCC------------CCTTEECCBSCHHHHGGGCCSC-
T ss_pred             CCC-CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeC-CCcc------------cCCCceEEeccccCHHHHHHhh-
Confidence            543 468999999999999999999999998  9999999 6543            1247889999999988888877 


Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                       +|+|||+|+..... ..+.+..+++|+.++.++++++++.+ +++|||+||..++. .                     
T Consensus        66 -~d~vi~~a~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~-~---------------------  120 (215)
T 2a35_A           66 -IDTAFCCLGTTIKE-AGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA-K---------------------  120 (215)
T ss_dssp             -CSEEEECCCCCHHH-HSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT-T---------------------
T ss_pred             -hcEEEECeeecccc-CCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCC-C---------------------
Confidence             99999999976532 23356889999999999999999998 89999999987432 1                     


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhccCCce-EEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhh
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYGSSGLE-VVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEE  237 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~-~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (341)
                              +.+.|+.+|..+|++++.   .+++ ++++||+.+||+.....     +...+    ......+.+      
T Consensus       121 --------~~~~y~~sK~~~e~~~~~---~~~~~~~~vrp~~v~g~~~~~~-----~~~~~----~~~~~~~~~------  174 (215)
T 2a35_A          121 --------SSIFYNRVKGELEQALQE---QGWPQLTIARPSLLFGPREEFR-----LAEIL----AAPIARILP------  174 (215)
T ss_dssp             --------CSSHHHHHHHHHHHHHTT---SCCSEEEEEECCSEESTTSCEE-----GGGGT----TCCCC----------
T ss_pred             --------CccHHHHHHHHHHHHHHH---cCCCeEEEEeCceeeCCCCcch-----HHHHH----HHhhhhccC------
Confidence                    136899999999999875   3788 99999999999965422     22222    111111111      


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccc
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVF  273 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~  273 (341)
                        +.++++|++|+|+++..+++++. .++||++++.
T Consensus       175 --~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~~~  207 (215)
T 2a35_A          175 --GKYHGIEACDLARALWRLALEEG-KGVRFVESDE  207 (215)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEHHH
T ss_pred             --CCcCcEeHHHHHHHHHHHHhcCC-CCceEEcHHH
Confidence              15689999999999999998765 6799998753

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.96  E-value=2.6e-27  Score=197.92  Aligned_cols=199  Identities=16%  Similarity=0.208  Sum_probs=153.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+||||||+|+||+++++.|+++|++|++++| +.....      ..  ...+++++.+|++|++.+.++++++|+|||+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r-~~~~~~------~~--~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~   74 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRLP------SE--GPRPAHVVVGDVLQAADVDKTVAGQDAVIVL   74 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CGGGSC------SS--SCCCSEEEESCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-Chhhcc------cc--cCCceEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence            79999999999999999999999999999999 754311      11  1347899999999999999999999999999


Q ss_pred             ccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcc
Q 019415           87 ATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNE  166 (341)
Q Consensus        87 a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  166 (341)
                      |+.....      ...+.|+.++.++++++++.+ +++|||+||..++. ...      ..                 ..
T Consensus        75 a~~~~~~------~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~-~~~------~~-----------------~~  123 (206)
T 1hdo_A           75 LGTRNDL------SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLW-DPT------KV-----------------PP  123 (206)
T ss_dssp             CCCTTCC------SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS-CTT------CS-----------------CG
T ss_pred             ccCCCCC------CccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeecc-Ccc------cc-----------------cc
Confidence            9976542      123588999999999999998 89999999997433 211      00                 01


Q ss_pred             hhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCC-CCcc
Q 019415          167 YLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK-LPLV  245 (341)
Q Consensus       167 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i  245 (341)
                      +...|+.+|..+|.+++.   .+++++++||+.+. +.....    .+...           +.  ..      . .+++
T Consensus       124 ~~~~y~~~K~~~e~~~~~---~~i~~~~lrp~~~~-~~~~~~----~~~~~-----------~~--~~------~~~~~i  176 (206)
T 1hdo_A          124 RLQAVTDDHIRMHKVLRE---SGLKYVAVMPPHIG-DQPLTG----AYTVT-----------LD--GR------GPSRVI  176 (206)
T ss_dssp             GGHHHHHHHHHHHHHHHH---TCSEEEEECCSEEE-CCCCCS----CCEEE-----------SS--SC------SSCSEE
T ss_pred             cchhHHHHHHHHHHHHHh---CCCCEEEEeCCccc-CCCCCc----ceEec-----------cc--CC------CCCCcc
Confidence            368899999999999864   57999999999983 322111    11100           00  00      2 5899


Q ss_pred             cHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          246 HIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      +++|+|+++..+++++...| +|+++++
T Consensus       177 ~~~Dva~~~~~~~~~~~~~g~~~~i~~g  204 (206)
T 1hdo_A          177 SKHDLGHFMLRCLTTDEYDGHSTYPSHQ  204 (206)
T ss_dssp             EHHHHHHHHHHTTSCSTTTTCEEEEECC
T ss_pred             CHHHHHHHHHHHhcCccccccceeeecc
Confidence            99999999999999876555 8999875

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.96  E-value=6e-28  Score=207.14  Aligned_cols=207  Identities=16%  Similarity=0.065  Sum_probs=159.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +|+||||||+|+||+++++.|+++|+  +|++++| +.......   .     ..+++++.+|++|++.+.++++++|+|
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r-~~~~~~~~---~-----~~~~~~~~~D~~d~~~~~~~~~~~d~v   88 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR-RKLTFDEE---A-----YKNVNQEVVDFEKLDDYASAFQGHDVG   88 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES-SCCCCCSG---G-----GGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEc-CCCCcccc---c-----cCCceEEecCcCCHHHHHHHhcCCCEE
Confidence            47999999999999999999999999  9999999 76542111   0     126789999999999999999999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+|+.....  ...+..+++|+.++.++++++++.+ +++|||+||.+++. .                          
T Consensus        89 i~~ag~~~~~--~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~-~--------------------------  138 (242)
T 2bka_A           89 FCCLGTTRGK--AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK-S--------------------------  138 (242)
T ss_dssp             EECCCCCHHH--HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT-T--------------------------
T ss_pred             EECCCccccc--CCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCC-C--------------------------
Confidence            9999975432  2345889999999999999999988 89999999987432 1                          


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCc-eEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGL-EVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL  242 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (341)
                         +...|+.+|..+|.+++.+   ++ +++++||+.++|+.....     ....+........+...  .       ..
T Consensus       139 ---~~~~Y~~sK~~~e~~~~~~---~~~~~~~vrpg~v~~~~~~~~-----~~~~~~~~~~~~~~~~~--~-------~~  198 (242)
T 2bka_A          139 ---SNFLYLQVKGEVEAKVEEL---KFDRYSVFRPGVLLCDRQESR-----PGEWLVRKFFGSLPDSW--A-------SG  198 (242)
T ss_dssp             ---CSSHHHHHHHHHHHHHHTT---CCSEEEEEECCEEECTTGGGS-----HHHHHHHHHHCSCCTTG--G-------GG
T ss_pred             ---CcchHHHHHHHHHHHHHhc---CCCCeEEEcCceecCCCCCCc-----HHHHHHHHhhcccCccc--c-------CC
Confidence               1357999999999999865   46 699999999999864322     22233333322211110  0       23


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCceEEEec
Q 019415          243 PLVHIDDVCEAHIFCMEKPSMSGRFFCTN  271 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~~g~~n~~~  271 (341)
                      .+++++|+|++++.++.++...+.|++++
T Consensus       199 ~~~~~~dva~~~~~~~~~~~~~~~~~~~~  227 (242)
T 2bka_A          199 HSVPVVTVVRAMLNNVVRPRDKQMELLEN  227 (242)
T ss_dssp             TEEEHHHHHHHHHHHHTSCCCSSEEEEEH
T ss_pred             cccCHHHHHHHHHHHHhCccccCeeEeeH
Confidence            48999999999999999877767777764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.96  E-value=6.9e-28  Score=217.94  Aligned_cols=227  Identities=15%  Similarity=0.168  Sum_probs=167.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecC-CCChHHHHHHhcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAE-IYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~~~~~~~~~~~~~d~Vi   84 (341)
                      +|+|||||||||||++|++.|+++|++|++++| +.+.. ....+...    .+++++.+| ++|++++.++++++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~-~~~~l~~~----~~v~~v~~D~l~d~~~l~~~~~~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-SLKGL-IAEELQAI----PNVTLFQGPLLNNVPLMDTLFEGAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CSCSH-HHHHHHTS----TTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC-CCChh-hHHHHhhc----CCcEEEECCccCCHHHHHHHHhcCCEEE
Confidence            578999999999999999999999999999999 77652 12223221    378899999 999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccccc-ccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLC-ASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~-~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+++....          ..|..+ .+++++|++.+++++|||+||..+ .++.                          
T Consensus        79 ~~a~~~~~----------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~--------------------------  121 (352)
T 1xgk_A           79 INTTSQAG----------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP--------------------------  121 (352)
T ss_dssp             ECCCSTTS----------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS--------------------------
T ss_pred             EcCCCCCc----------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC--------------------------
Confidence            99875421          235666 999999998865789999999862 2210                          


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhh-HhcCccccccccchhhccCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ-LTNNEYVYQTLRDTEEILGKL  242 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  242 (341)
                        .+.+.|+.+|..+|++++..   +++++++||+ +||++....  .   ...+... ...+...+.   ...++.+.+
T Consensus       122 --~~~~~y~~sK~~~E~~~~~~---gi~~~ivrpg-~~g~~~~~~--~---~~~~~~~~~~~g~~~~~---~~~~~~~~~  187 (352)
T 1xgk_A          122 --WPAVPMWAPKFTVENYVRQL---GLPSTFVYAG-IYNNNFTSL--P---YPLFQMELMPDGTFEWH---APFDPDIPL  187 (352)
T ss_dssp             --CCCCTTTHHHHHHHHHHHTS---SSCEEEEEEC-EEGGGCBSS--S---CSSCBEEECTTSCEEEE---ESSCTTSCE
T ss_pred             --CCCccHHHHHHHHHHHHHHc---CCCEEEEecc-eecCCchhc--c---cccccccccCCCceEEe---eccCCCCce
Confidence              11367999999999999853   7999999986 688764432  1   1111111 112221110   011123388


Q ss_pred             CcccH-HHHHHHHHHhhcCCC---CCceEEEeccccCHHHHHHHHHHhCCC
Q 019415          243 PLVHI-DDVCEAHIFCMEKPS---MSGRFFCTNVFVSSAEIASCLQQNYPE  289 (341)
Q Consensus       243 ~~i~v-~D~a~~~~~~~~~~~---~~g~~n~~~~~~s~~e~~~~i~~~~~~  289 (341)
                      +++|+ +|+|+++..++.++.   .+++||++++.+|+.|+++.+.+.++.
T Consensus       188 ~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          188 PWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             EEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             eeEecHHHHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence            99999 899999999998652   345999998779999999999998853

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.95  E-value=4.3e-27  Score=206.39  Aligned_cols=244  Identities=12%  Similarity=0.028  Sum_probs=170.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |+. ++|+||||||+|+||+++++.|+++|++|++++| +.......  ....   ...++++.+|++|++++.++++  
T Consensus         1 M~~-~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~--~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~   73 (281)
T 3m1a_A            1 MSE-SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR-RTEALDDL--VAAY---PDRAEAISLDVTDGERIDVVAADV   73 (281)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SGGGGHHH--HHHC---TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCC-CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHhc---cCCceEEEeeCCCHHHHHHHHHHH
Confidence            442 4689999999999999999999999999999999 76432221  1122   2478999999999998888776  


Q ss_pred             -----CCCEEEEeccCCccc-----cchhHhHhhhhhhhH----HHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI-----DGYLYKNVVEACVGA----AKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|+|||+||.....     ..+.++..+++|+.+    +..++..+++.+ ..++|++||..+..+.       
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------  145 (281)
T 3m1a_A           74 LARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSF-------  145 (281)
T ss_dssp             HHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC-------
T ss_pred             HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCC-------
Confidence                 789999999975432     145567889999999    555555566766 7899999998755432       


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCC-CchhhhhH
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSST-PVSVIGGL  219 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~-~~~~~~~~  219 (341)
                                           .+...|+.||...|.+.+.++ +   .|++++++|||.+.++........ ......+.
T Consensus       146 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  204 (281)
T 3m1a_A          146 ---------------------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYA  204 (281)
T ss_dssp             ---------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTH
T ss_pred             ---------------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhH
Confidence                                 225789999999999999887 4   599999999999988754322000 01111111


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccc-cCHHHHHHHHHHhC
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVF-VSSAEIASCLQQNY  287 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~-~s~~e~~~~i~~~~  287 (341)
                      .......... ....      ...+.+++|+|++++.+++.+...+.|+++++. ..+.+....+.+.+
T Consensus       205 ~~~~~~~~~~-~~~~------~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~  266 (281)
T 3m1a_A          205 EKVGPTRQLV-QGSD------GSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL  266 (281)
T ss_dssp             HHHHHHHHHH-HC-----------CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred             HHhHHHHHHH-hhcc------CCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence            1111111111 1111      567889999999999999988777799998864 55566665555543

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.95  E-value=4.2e-27  Score=210.13  Aligned_cols=217  Identities=16%  Similarity=0.155  Sum_probs=159.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC-chhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE-DKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ++||||||||+||+++++.|+++|++|++++| +.. ....+..+..     .+++++.+|++|++++.++++++|+|||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~~~~~l~~-----~~v~~v~~Dl~d~~~l~~a~~~~d~vi~   85 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTR-PNSSKTTLLDEFQS-----LGAIIVKGELDEHEKLVELMKKVDVVIS   85 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEEC-TTCSCHHHHHHHHH-----TTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEEC-CCCchhhHHHHhhc-----CCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            48999999999999999999999999999999 764 2122222222     3789999999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +++...              +.++.+++++|++.+++++||+ |+.+    ..          .+|.+  +        .
T Consensus        86 ~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~~g----~~----------~~~~~--~--------~  126 (318)
T 2r6j_A           86 ALAFPQ--------------ILDQFKILEAIKVAGNIKRFLP-SDFG----VE----------EDRIN--A--------L  126 (318)
T ss_dssp             CCCGGG--------------STTHHHHHHHHHHHCCCCEEEC-SCCS----SC----------TTTCC--C--------C
T ss_pred             CCchhh--------------hHHHHHHHHHHHhcCCCCEEEe-eccc----cC----------ccccc--C--------C
Confidence            998532              4567899999999865889985 4322    11          11211  0        1


Q ss_pred             ch-hhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhccCCC
Q 019415          166 EY-LRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEILGKL  242 (341)
Q Consensus       166 ~~-~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  242 (341)
                      .+ ...| .+|..+|++++.   .+++++++||+.+++.          +.+.+........  ..++.      +...+
T Consensus       127 ~p~~~~y-~sK~~~e~~~~~---~~~~~~~lr~~~~~~~----------~~~~~~~~~~~~~~~~~~~~------~~~~~  186 (318)
T 2r6j_A          127 PPFEALI-ERKRMIRRAIEE---ANIPYTYVSANCFASY----------FINYLLRPYDPKDEITVYGT------GEAKF  186 (318)
T ss_dssp             HHHHHHH-HHHHHHHHHHHH---TTCCBEEEECCEEHHH----------HHHHHHCTTCCCSEEEEETT------SCCEE
T ss_pred             CCcchhH-HHHHHHHHHHHh---cCCCeEEEEcceehhh----------hhhhhccccCCCCceEEecC------CCcee
Confidence            22 4578 999999999874   4799999999988764          2333332221222  22222      33489


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCc-eEEEe-c-cccCHHHHHHHHHHhCC
Q 019415          243 PLVHIDDVCEAHIFCMEKPSMSG-RFFCT-N-VFVSSAEIASCLQQNYP  288 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~~g-~~n~~-~-~~~s~~e~~~~i~~~~~  288 (341)
                      +++|++|+++++..++.++...+ .|++. + +.+|+.|+++.+.+.++
T Consensus       187 ~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g  235 (318)
T 2r6j_A          187 AMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIG  235 (318)
T ss_dssp             EEECHHHHHHHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             eEeeHHHHHHHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhC
Confidence            99999999999999998765434 67765 3 46999999999999874

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=2.4e-27  Score=211.13  Aligned_cols=231  Identities=15%  Similarity=0.147  Sum_probs=164.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc--hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED--KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +|+||||||||+||+++++.|++.|++|++++| +.+.  ..+...+..+.  ..+++++.+|++|++++.++++++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~d~v   80 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQVDVV   80 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECC-SCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEEC-CCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHhCCCEE
Confidence            578999999999999999999999999999999 7542  12222222211  137899999999999999999999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+++.....          .|+.++.+++++|++.+++++||+ |+.+    ...      ..+  +..   .      
T Consensus        81 i~~a~~~~~~----------~~~~~~~~l~~aa~~~g~v~~~v~-S~~g----~~~------~~~--~~~---~------  128 (313)
T 1qyd_A           81 ISALAGGVLS----------HHILEQLKLVEAIKEAGNIKRFLP-SEFG----MDP------DIM--EHA---L------  128 (313)
T ss_dssp             EECCCCSSSS----------TTTTTHHHHHHHHHHSCCCSEEEC-SCCS----SCT------TSC--CCC---C------
T ss_pred             EECCccccch----------hhHHHHHHHHHHHHhcCCCceEEe-cCCc----CCc------ccc--ccC---C------
Confidence            9999975432          268889999999999866899986 4322    111      111  110   0      


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhh-HhhHhcCc-cccccccchhhccCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGG-LCQLTNNE-YVYQTLRDTEEILGK  241 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~  241 (341)
                       ......| .+|..+|++++.   .+++++++||+.++|+.....      .... ........ ..++.      +...
T Consensus       129 -~p~~~~y-~sK~~~e~~~~~---~g~~~~ilrp~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~------g~~~  191 (313)
T 1qyd_A          129 -QPGSITF-IDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSL------AQLDGHMMPPRDKVLIYGD------GNVK  191 (313)
T ss_dssp             -SSTTHHH-HHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTS------SCTTCCSSCCSSEECCBTT------SCSE
T ss_pred             -CCCcchH-HHHHHHHHHHHh---cCCCeEEEEeceecccccccc------ccccccccCCCCeEEEeCC------CCce
Confidence             0114678 999999999874   479999999999988632211      1000 00001111 22222      3338


Q ss_pred             CCcccHHHHHHHHHHhhcCCCCC-ceEEEec--cccCHHHHHHHHHHhCC
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSMS-GRFFCTN--VFVSSAEIASCLQQNYP  288 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~~-g~~n~~~--~~~s~~e~~~~i~~~~~  288 (341)
                      ++++|++|+|+++..++.++... +.|++.+  +.+|+.|+++.+.+.++
T Consensus       192 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g  241 (313)
T 1qyd_A          192 GIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE  241 (313)
T ss_dssp             EEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             EEEEEHHHHHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcC
Confidence            99999999999999999876543 4677653  46999999999999874

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.94  E-value=2.3e-26  Score=204.21  Aligned_cols=226  Identities=17%  Similarity=0.198  Sum_probs=158.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc---h-hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED---K-SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      +|+||||||||+||+++++.|++.|++|++++| +.+.   . .+...+..+.  ..+++++.+|++|++++.++++++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d   78 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVR-KTITAANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIKQVD   78 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEEC-CSCCSSCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEEC-CCcccCChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHhCCC
Confidence            578999999999999999999999999999999 7511   0 1222221111  1378899999999999999999999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      +|||+|+...              +.++.+++++|++.+++++||+ |+.+    ..          .+|..  +.    
T Consensus        79 ~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~~g----~~----------~~~~~--~~----  123 (307)
T 2gas_A           79 IVICAAGRLL--------------IEDQVKIIKAIKEAGNVKKFFP-SEFG----LD----------VDRHD--AV----  123 (307)
T ss_dssp             EEEECSSSSC--------------GGGHHHHHHHHHHHCCCSEEEC-SCCS----SC----------TTSCC--CC----
T ss_pred             EEEECCcccc--------------cccHHHHHHHHHhcCCceEEee-cccc----cC----------ccccc--CC----
Confidence            9999998643              4567899999998865899983 3321    11          11111  00    


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhccC
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEILG  240 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  240 (341)
                         ....+.| .+|..+|+.++.   .+++++++||+.++++.....      ............ ..++.      +..
T Consensus       124 ---~p~~~~y-~sK~~~e~~~~~---~~i~~~~lrp~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------~~~  184 (307)
T 2gas_A          124 ---EPVRQVF-EEKASIRRVIEA---EGVPYTYLCCHAFTGYFLRNL------AQLDATDPPRDKVVILGD------GNV  184 (307)
T ss_dssp             ---TTHHHHH-HHHHHHHHHHHH---HTCCBEEEECCEETTTTGGGT------TCTTCSSCCSSEEEEETT------SCS
T ss_pred             ---CcchhHH-HHHHHHHHHHHH---cCCCeEEEEcceeeccccccc------cccccccCCCCeEEEecC------CCc
Confidence               0124689 999999998874   369999999999988632211      100000001111 12222      333


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCCCc-eEEEe-c-cccCHHHHHHHHHHhCC
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSMSG-RFFCT-N-VFVSSAEIASCLQQNYP  288 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~-~-~~~s~~e~~~~i~~~~~  288 (341)
                      .+++++++|+|+++..++.++...+ .|++. + +.+|+.|+++.+.+.++
T Consensus       185 ~~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g  235 (307)
T 2gas_A          185 KGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIG  235 (307)
T ss_dssp             EEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             ceEEeeHHHHHHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhC
Confidence            7899999999999999998765444 66665 3 46999999999999874

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.94  E-value=8.5e-27  Score=207.11  Aligned_cols=226  Identities=18%  Similarity=0.247  Sum_probs=161.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch---hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK---SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +|+||||||||+||+++++.|++.|++|++++| +....   .+...+..+.  ..+++++.+|++|++++.++++++|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R-~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~d~   80 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVR-ESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVDV   80 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECC-CCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEEC-CcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcCCCE
Confidence            578999999999999999999999999999999 75431   2222222211  13789999999999999999999999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |||+|+...              +.++.+++++|++.+++++||+ |+.+    ..          .+|.+  +.     
T Consensus        81 vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~~g----~~----------~~~~~--~~-----  124 (308)
T 1qyc_A           81 VISTVGSLQ--------------IESQVNIIKAIKEVGTVKRFFP-SEFG----ND----------VDNVH--AV-----  124 (308)
T ss_dssp             EEECCCGGG--------------SGGGHHHHHHHHHHCCCSEEEC-SCCS----SC----------TTSCC--CC-----
T ss_pred             EEECCcchh--------------hhhHHHHHHHHHhcCCCceEee-cccc----cC----------ccccc--cC-----
Confidence            999998532              4557899999999865899984 4422    11          11211  11     


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhccCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEILGK  241 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  241 (341)
                        ......| .+|..+|+.++.   .+++++++||+.++|+.....      ............ ..+++      +...
T Consensus       125 --~p~~~~y-~sK~~~e~~~~~---~~~~~~~~r~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~------~~~~  186 (308)
T 1qyc_A          125 --EPAKSVF-EVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSL------AQAGLTAPPRDKVVILGD------GNAR  186 (308)
T ss_dssp             --TTHHHHH-HHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTT------TCTTCSSCCSSEEEEETT------SCCE
T ss_pred             --CcchhHH-HHHHHHHHHHHh---cCCCeEEEEeceecccccccc------ccccccCCCCCceEEecC------CCce
Confidence              0114678 999999999875   369999999999988643221      100000001111 22222      3348


Q ss_pred             CCcccHHHHHHHHHHhhcCCCCCc-eEEEec--cccCHHHHHHHHHHhCC
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSMSG-RFFCTN--VFVSSAEIASCLQQNYP  288 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~--~~~s~~e~~~~i~~~~~  288 (341)
                      ++++|++|+|+++..++.++...+ +|++.+  +.+|+.|+++.+.+.++
T Consensus       187 ~~~i~~~Dva~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g  236 (308)
T 1qyc_A          187 VVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKID  236 (308)
T ss_dssp             EEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTT
T ss_pred             EEEecHHHHHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhC
Confidence            999999999999999998765434 677653  46999999999999985

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.94  E-value=4.1e-25  Score=193.44  Aligned_cols=237  Identities=17%  Similarity=0.170  Sum_probs=173.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +.......  ...+.. ..++.++.+|++|++++.++++      
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI-ADDHGQKV--CNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-ChhHHHHH--HHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999 65332111  111211 1378999999999998888876      


Q ss_pred             -CCCEEEEeccCCccc-------cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-------DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ++|+|||+||.....       ..+.++..+++|+.++.++++++...    + .++||++||..++.+..        
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--------  161 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE--------  161 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT--------
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCC--------
Confidence             799999999975421       13456789999999999999988663    4 57999999988544221        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         .+...|+.+|...|.+++.++ +   .|++++++||+.++++.....  ... .......+
T Consensus       162 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~-~~~~~~~~  219 (278)
T 2bgk_A          162 -------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV--FGV-DSSRVEEL  219 (278)
T ss_dssp             -------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS--SSC-CHHHHHHH
T ss_pred             -------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhh--ccc-chhHHHHh
Confidence                               024789999999999999887 3   589999999999999865432  111 11111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc-ccCHHHHHHHHHHhC
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV-FVSSAEIASCLQQNY  287 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~-~~s~~e~~~~i~~~~  287 (341)
                      ....     ...      ...+++++|+|+++..++...  ...| .|++.++ .+++.|+++.+++.+
T Consensus       220 ~~~~-----~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          220 AHQA-----ANL------KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             HHHT-----CSS------CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             hhcc-----ccc------ccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            1100     001      456899999999999998653  2345 7888775 589999999887653

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.94  E-value=2.3e-26  Score=198.62  Aligned_cols=227  Identities=13%  Similarity=-0.003  Sum_probs=157.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----CCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----GCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~d~   82 (341)
                      |+||||||+|+||+++++.|+++|++|++++| +.....             .  .+.+|+++++.+.++++    ++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r-~~~~~~-------------~--~~~~D~~~~~~~~~~~~~~~~~~d~   65 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDR-GQADIE-------------A--DLSTPGGRETAVAAVLDRCGGVLDG   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SSSSEE-------------C--CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeC-ChhHcc-------------c--cccCCcccHHHHHHHHHHcCCCccE
Confidence            58999999999999999999999999999999 764310             0  16789999998988886    8999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCCCCC-------
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDSIDE-------  151 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E-------  151 (341)
                      |||+||.....  .+++..+++|+.++.++++++...    + .++||++||..++++...      ..+..|       
T Consensus        66 vi~~Ag~~~~~--~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~------~~~~~~~~~~~~~  136 (255)
T 2dkn_A           66 LVCCAGVGVTA--ANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAA------ELPMVEAMLAGDE  136 (255)
T ss_dssp             EEECCCCCTTS--SCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGG------GCHHHHHHHHTCH
T ss_pred             EEECCCCCCcc--hhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEecccccccccc------ccchhhhhcccch
Confidence            99999976522  235689999999999999987654    4 689999999986553211      011111       


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                      +.+...   ......+...|+.+|..+|.+++.++ +   .|++++++||+.++|+...          .+........ 
T Consensus       137 ~~~~~~---~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~----------~~~~~~~~~~-  202 (255)
T 2dkn_A          137 ARAIEL---AEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ----------ASKADPRYGE-  202 (255)
T ss_dssp             HHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH----------HHHHCTTTHH-
T ss_pred             hhhhhh---ccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh----------hcccchhhHH-
Confidence            000000   00001246799999999999999887 4   5999999999999987321          1111000000 


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc-cCHH
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF-VSSA  277 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~-~s~~  277 (341)
                      ......    + ...++++++|+|++++.++..+  ...| .|+++++. ++++
T Consensus       203 ~~~~~~----~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          203 STRRFV----A-PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             HHHSCC----C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             HHHHHH----H-HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence            000000    0 1567999999999999999865  3445 88998763 4443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=4.5e-26  Score=203.69  Aligned_cols=222  Identities=18%  Similarity=0.193  Sum_probs=159.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC-Cc--hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL-ED--KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~--~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|+||||||||+||+++++.|+++|++|++++| +. +.  ..+...+..+.  ..+++++.+|++|++++.++++++|
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R-~~~~~~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~~~d   79 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYAR-PLTPDSTPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLKQVD   79 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEEC-CCCTTCCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEEC-CcccccChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHcCCC
Confidence            4578999999999999999999999999999999 75 21  12222222111  1378999999999999999999999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      +|||+|+...              +.++.+++++|++.+++++||+ |+.+    ..          .+|..  +     
T Consensus        80 ~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~~g----~~----------~~~~~--~-----  123 (321)
T 3c1o_A           80 IVISALPFPM--------------ISSQIHIINAIKAAGNIKRFLP-SDFG----CE----------EDRIK--P-----  123 (321)
T ss_dssp             EEEECCCGGG--------------SGGGHHHHHHHHHHCCCCEEEC-SCCS----SC----------GGGCC--C-----
T ss_pred             EEEECCCccc--------------hhhHHHHHHHHHHhCCccEEec-cccc----cC----------ccccc--c-----
Confidence            9999998632              5567899999998865889983 3321    11          11211  0     


Q ss_pred             ccCcch-hhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhh----HhcCc-cccccccch
Q 019415          162 TCHNEY-LRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ----LTNNE-YVYQTLRDT  235 (341)
Q Consensus       162 ~~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~  235 (341)
                         ..+ .+.| .+|..+|.+++.   .+++++++||+.++++.          ...+...    ..... ..++.    
T Consensus       124 ---~~p~~~~y-~sK~~~e~~~~~---~~~~~~~lrp~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~----  182 (321)
T 3c1o_A          124 ---LPPFESVL-EKKRIIRRAIEA---AALPYTYVSANCFGAYF----------VNYLLHPSPHPNRNDDIVIYGT----  182 (321)
T ss_dssp             ---CHHHHHHH-HHHHHHHHHHHH---HTCCBEEEECCEEHHHH----------HHHHHCCCSSCCTTSCEEEETT----
T ss_pred             ---CCCcchHH-HHHHHHHHHHHH---cCCCeEEEEeceecccc----------ccccccccccccccCceEEecC----
Confidence               122 5689 999999999874   36999999999988752          2222211    11111 22222    


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEec--cccCHHHHHHHHHHhCC
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTN--VFVSSAEIASCLQQNYP  288 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~--~~~s~~e~~~~i~~~~~  288 (341)
                        +...++++|++|+|+++..++.++...| +|++.+  +.+|+.|+++.+.+.++
T Consensus       183 --~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g  236 (321)
T 3c1o_A          183 --GETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSG  236 (321)
T ss_dssp             --SCCEEEEECHHHHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             --CCcceeEeeHHHHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcC
Confidence              3338899999999999999998765444 677753  46999999999999874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=4.5e-25  Score=193.20  Aligned_cols=243  Identities=12%  Similarity=0.083  Sum_probs=159.4

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |...++++||||||+|+||+++++.|++.|++|++++| +....... +.+.........+.++.+|+++++++.++++ 
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGR-HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILST   79 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHH
Confidence            66556789999999999999999999999999999999 75432221 1111101222468899999999998888876 


Q ss_pred             ------CCCEEEEeccCCccc---------cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEeccccc-ccCCC
Q 019415           79 ------GCDFVFHVATPLQHI---------DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLC-ASPLK  138 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~-~~~~~  138 (341)
                            ++|++||+||.....         ..+.++..+++|+.++.++++++...    +  .++|++||..+ +.+. 
T Consensus        80 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~-  156 (278)
T 1spx_A           80 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHAT-  156 (278)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCC-
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCC-
Confidence                  799999999975432         23446788999999999999888664    4  79999999874 3321 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCC-CCCc
Q 019415          139 EDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYS-STPV  213 (341)
Q Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~-~~~~  213 (341)
                                                 .....|+.||...+.+.+.++ +   .|++++++|||.+.++...... ..+.
T Consensus       157 ---------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~  209 (278)
T 1spx_A          157 ---------------------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEET  209 (278)
T ss_dssp             ---------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----------
T ss_pred             ---------------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchh
Confidence                                       124789999999999998876 3   5899999999999987533210 0000


Q ss_pred             h--hhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC---CCc-eEEEecc-ccCHHHHHHHHHHh
Q 019415          214 S--VIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSG-RFFCTNV-FVSSAEIASCLQQN  286 (341)
Q Consensus       214 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g-~~n~~~~-~~s~~e~~~~i~~~  286 (341)
                      .  .......+...       ..      ...+++++|+|+++..++..+.   ..| +|++.++ .+++.|+++.+.+.
T Consensus       210 ~~~~~~~~~~~~~~-------~p------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~  276 (278)
T 1spx_A          210 SKKFYSTMATMKEC-------VP------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKL  276 (278)
T ss_dssp             ----HHHHHHHHHH-------CT------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-----------
T ss_pred             hhhhhHHHHHHHhc-------CC------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHH
Confidence            0  00001111100       00      3458899999999999987532   456 7888775 58999999998875


Q ss_pred             C
Q 019415          287 Y  287 (341)
Q Consensus       287 ~  287 (341)
                      +
T Consensus       277 ~  277 (278)
T 1spx_A          277 L  277 (278)
T ss_dssp             -
T ss_pred             h
Confidence            3

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.94  E-value=3.3e-25  Score=190.26  Aligned_cols=216  Identities=16%  Similarity=0.149  Sum_probs=158.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---CCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---GCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d   81 (341)
                      ++|+||||||+|+||+++++.|++.|++|++++| +.......  ....    .+++++.+|+++++++.++++   ++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~--~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id   78 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR-TNSDLVSL--AKEC----PGIEPVCVDLGDWDATEKALGGIGPVD   78 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHS----TTCEEEECCTTCHHHHHHHHTTCCCCS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHhc----cCCCcEEecCCCHHHHHHHHHHcCCCC
Confidence            5689999999999999999999999999999999 65332211  1112    256788999999999999986   479


Q ss_pred             EEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                      +|||+||......     .+.++..+++|+.++.++++++...    +..++||++||..++.+.               
T Consensus        79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------  143 (244)
T 1cyd_A           79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF---------------  143 (244)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------------
T ss_pred             EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC---------------
Confidence            9999999754321     3455688999999999998887654    213799999998754421               


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV  228 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (341)
                                   .+...|+.+|...|.+++.++ +   .++++.++||+.++++.....  ..  ...+...+...   
T Consensus       144 -------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~--~~--~~~~~~~~~~~---  203 (244)
T 1cyd_A          144 -------------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV--SA--DPEFARKLKER---  203 (244)
T ss_dssp             -------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH--TC--CHHHHHHHHHH---
T ss_pred             -------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc--cc--CHHHHHHHHhc---
Confidence                         124789999999999999887 4   489999999999998743211  00  11121211111   


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                          ..      .+++++++|+|+++..++..+.  ..| .+++.++
T Consensus       204 ----~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 1cyd_A          204 ----HP------LRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG  240 (244)
T ss_dssp             ----ST------TSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             ----CC------ccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCC
Confidence                11      5679999999999999997542  345 6677655

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.2e-24  Score=188.49  Aligned_cols=208  Identities=17%  Similarity=0.173  Sum_probs=159.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +...           .....+.++.+|++|++++.++++      
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~-----------~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR-SIKP-----------SADPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SCCC-----------CSSTTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-Chhh-----------cccCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            4578999999999999999999999999999999 7543           112378999999999998888876      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||..+..+...         
T Consensus        95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~---------  164 (260)
T 3un1_A           95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVG---------  164 (260)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTT---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCC---------
Confidence             7999999999765322     4556788999999999999987    4555 689999999864321111         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC---CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS---GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~---~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .+...|+.||...+.+.+.++ +.   |+++.+++||.|+++.....         ....+..
T Consensus       165 -----------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---------~~~~~~~  218 (260)
T 3un1_A          165 -----------------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---------THSTLAG  218 (260)
T ss_dssp             -----------------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---------GHHHHHT
T ss_pred             -----------------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---------HHHHHhc
Confidence                             235789999999999999887 43   89999999999998853221         1111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~  273 (341)
                      .       ..      ...+.+++|+|++++.+.+.....| ++++.++.
T Consensus       219 ~-------~p------~~r~~~~~dva~av~~L~~~~~itG~~i~vdGG~  255 (260)
T 3un1_A          219 L-------HP------VGRMGEIRDVVDAVLYLEHAGFITGEILHVDGGQ  255 (260)
T ss_dssp             T-------ST------TSSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTG
T ss_pred             c-------CC------CCCCcCHHHHHHHHHHhcccCCCCCcEEEECCCe
Confidence            1       01      4567889999999999866555667 78887653

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.93  E-value=1.2e-24  Score=188.53  Aligned_cols=230  Identities=16%  Similarity=0.132  Sum_probs=163.6

Q ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            2 DHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         2 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ...++|++|||||+|+||+++++.|+++|++|++++| +.......  ...+   ...+.++++|++|++++.++++   
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~--~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~   77 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADI-DIERARQA--AAEI---GPAAYAVQMDVTRQDSIDAAIAATV   77 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHh---CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            3345689999999999999999999999999999999 65432221  1111   2368899999999998888876   


Q ss_pred             ----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                          ++|++||+||......     .+.++..+++|+.++.++++++...    +...++|++||..++.+..       
T Consensus        78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  150 (259)
T 4e6p_A           78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA-------  150 (259)
T ss_dssp             HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC-------
Confidence                7999999999755332     4556788999999999999987543    1135999999988655322       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...+.+.+.++ +   .|+++.+++||.++++....       ...+...
T Consensus       151 ---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-------~~~~~~~  202 (259)
T 4e6p_A          151 ---------------------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG-------VDALFAR  202 (259)
T ss_dssp             ---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH-------HHHHHHH
T ss_pred             ---------------------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh-------hhhhhhh
Confidence                                 25789999999999999887 3   38999999999999874221       1111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ..... .-..............+.+++|+|+++..++...  ...| +|++.++.
T Consensus       203 ~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          203 YENRP-RGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             HHTCC-TTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             hccCC-hHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcCh
Confidence            11110 0000000111222677999999999999988643  2345 88887763

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.93  E-value=7.9e-25  Score=189.15  Aligned_cols=221  Identities=13%  Similarity=0.082  Sum_probs=162.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+|+||+++++.|++.|++|++++| +....... +.+..   ....+.++.+|++|++++.++++     
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDEIQQ---LGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHH---hCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999999 75432211 12222   22478899999999998888876     


Q ss_pred             --CCCEEEEeccCCccc----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                        ++|+|||+||.....    ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.           
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----------  153 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN-----------  153 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC-----------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC-----------
Confidence              799999999976532    144567889999999999988875    445 6899999998754321           


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .+...|+.+|...|.+++.++ +   .++++.++||+.++++.....     ..+.+...+..
T Consensus       154 -----------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~~~  211 (255)
T 1fmc_A          154 -----------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-----ITPEIEQKMLQ  211 (255)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-----CCHHHHHHHHH
T ss_pred             -----------------CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc-----cChHHHHHHHh
Confidence                             125789999999999999887 3   389999999999998743221     01222222211


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc-cCH
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF-VSS  276 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~-~s~  276 (341)
                      ..       .      ...+++++|+|+++..++....  ..| +|+++++. +|+
T Consensus       212 ~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          212 HT-------P------IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             TC-------S------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             cC-------C------cccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            11       0      3458899999999999987532  345 89998754 453

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.93  E-value=2.5e-24  Score=184.77  Aligned_cols=215  Identities=16%  Similarity=0.143  Sum_probs=158.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc---CC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ---GC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   80 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +...   .+.+ ...    .+++++.+|++|++.+.++++   ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r-~~~~---~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~i   77 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR-TQAD---LDSLVREC----PGIEPVCVDLGDWEATERALGSVGPV   77 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHHS----TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHHc----CCCCEEEEeCCCHHHHHHHHHHcCCC
Confidence            5689999999999999999999999999999999 6533   2222 222    256778999999999999986   58


Q ss_pred             CEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      |+|||+||......     .+.++..+++|+.++.++++++...    +...++|++||..++.+.              
T Consensus        78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------  143 (244)
T 3d3w_A           78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV--------------  143 (244)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------------
T ss_pred             CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC--------------
Confidence            99999999754321     3456789999999999998887653    214799999998754321              


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                                    .+...|+.||...|.+++.++ +   .++++.++||+.++++........+.    ....+...  
T Consensus       144 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~~--  203 (244)
T 3d3w_A          144 --------------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH----KAKTMLNR--  203 (244)
T ss_dssp             --------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTT----HHHHHHHT--
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChH----HHHHHHhh--
Confidence                          125789999999999999887 3   48999999999999874321100001    11111111  


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                           ..      ...+++++|+|+++..++...  ...| .|++.++
T Consensus       204 -----~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          204 -----IP------LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             -----CT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CC------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                 01      456899999999999999753  2345 7888765

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.93  E-value=2.1e-24  Score=187.46  Aligned_cols=223  Identities=14%  Similarity=0.102  Sum_probs=157.5

Q ss_pred             CCCC-CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCC-------CceEEEecCCCChHH
Q 019415            1 MDHK-SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAE-------TRLIFFEAEIYDPDT   72 (341)
Q Consensus         1 M~~~-~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~   72 (341)
                      |... ++++||||||+|+||+++++.|+++|++|++++| +......  ....+....       .++.++.+|++|++.
T Consensus         1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   77 (264)
T 2pd6_A            1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDL-DRAAAQE--TVRLLGGPGSKEGPPRGNHAAFQADVSEARA   77 (264)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHH--HHHTC------------CCEEEECCTTSHHH
T ss_pred             CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHH--HHHHHHhcCccccccCcceEEEEecCCCHHH
Confidence            4433 4578999999999999999999999999999999 6543221  112221111       468899999999988


Q ss_pred             HHHHhcC-------C-CEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEeccccccc
Q 019415           73 FENAIQG-------C-DFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCAS  135 (341)
Q Consensus        73 ~~~~~~~-------~-d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~  135 (341)
                      +.++++.       + |+|||+||.....     ..+.++..+++|+.++.++++++...    +...+||++||..+.+
T Consensus        78 ~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  157 (264)
T 2pd6_A           78 ARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV  157 (264)
T ss_dssp             HHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH
T ss_pred             HHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc
Confidence            8887764       3 9999999976532     24456788999999999999988664    1136899999987555


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCC
Q 019415          136 PLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSST  211 (341)
Q Consensus       136 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~  211 (341)
                      +..                            +...|+.+|...|.+.+.++ +   .|++++++||+.++++.....   
T Consensus       158 ~~~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---  206 (264)
T 2pd6_A          158 GNV----------------------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV---  206 (264)
T ss_dssp             CCT----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------
T ss_pred             CCC----------------------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc---
Confidence            322                            25789999999999988876 4   589999999999999854321   


Q ss_pred             CchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          212 PVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                         ...+...+...       ..      ...+++++|+|+++..++...  ...| .+++.++.
T Consensus       207 ---~~~~~~~~~~~-------~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  255 (264)
T 2pd6_A          207 ---PQKVVDKITEM-------IP------MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGL  255 (264)
T ss_dssp             ---------CTGGG-------CT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ---CHHHHHHHHHh-------CC------CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence               11111111100       00      345788999999999998753  2345 77887654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.93  E-value=1.3e-24  Score=181.26  Aligned_cols=186  Identities=13%  Similarity=0.100  Sum_probs=146.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC---CCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG---CDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~d~   82 (341)
                      +|+||||||+|+||+++++.|+ +|++|++++| +..                   ++.+|+++++.+++++++   +|+
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r-~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~   61 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGR-HSG-------------------DVTVDITNIDSIKKMYEQVGKVDA   61 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEES-SSS-------------------SEECCTTCHHHHHHHHHHHCCEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEec-Ccc-------------------ceeeecCCHHHHHHHHHHhCCCCE
Confidence            4689999999999999999999 9999999999 542                   478999999999988875   899


Q ss_pred             EEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTP  156 (341)
Q Consensus        83 Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (341)
                      |||+||......     .+.++..+++|+.++.++++++...- .-.+||++||..+..+.                   
T Consensus        62 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-------------------  122 (202)
T 3d7l_A           62 IVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI-------------------  122 (202)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC-------------------
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC-------------------
Confidence            999999654321     34456788999999999999998761 01699999998743321                   


Q ss_pred             CCCCCccCcchhhhHHHhHHHHHHHHHhhc-c--CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccccccc
Q 019415          157 PDHPLTCHNEYLRVYIESKMKSEKELLSYG-S--SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLR  233 (341)
Q Consensus       157 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~--~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (341)
                               .+...|+.+|...|.+++.++ +  .|++++++||+.++++..           ..           ....
T Consensus       123 ---------~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~-----------~~-----------~~~~  171 (202)
T 3d7l_A          123 ---------VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD-----------KL-----------EPFF  171 (202)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH-----------HH-----------GGGS
T ss_pred             ---------CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh-----------hh-----------hhhc
Confidence                     124789999999999999988 4  389999999999988731           00           0001


Q ss_pred             chhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEE
Q 019415          234 DTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFC  269 (341)
Q Consensus       234 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~  269 (341)
                      .      .+++++++|+|++++.++.. ...| +||+
T Consensus       172 ~------~~~~~~~~dva~~~~~~~~~-~~~G~~~~v  201 (202)
T 3d7l_A          172 E------GFLPVPAAKVARAFEKSVFG-AQTGESYQV  201 (202)
T ss_dssp             T------TCCCBCHHHHHHHHHHHHHS-CCCSCEEEE
T ss_pred             c------ccCCCCHHHHHHHHHHhhhc-cccCceEec
Confidence            1      56799999999999998854 3445 7776

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=5.5e-24  Score=179.89  Aligned_cols=200  Identities=14%  Similarity=0.151  Sum_probs=142.8

Q ss_pred             cEEEEecCcchHHHHHHHHHH-HCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLL-DKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ++||||||+|+||+++++.|+ +.|++|++++| +...  +.+.+..   ...+++++.+|++|++++.++++++|+|||
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r-~~~~--~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~   79 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGR-QLKT--RIPPEII---DHERVTVIEGSFQNPGXLEQAVTNAEVVFV   79 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEES-SHHH--HSCHHHH---TSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEec-Cccc--cchhhcc---CCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            459999999999999999999 89999999999 6530  2222211   124799999999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +|+..              |+. +.++++++++.+ +++||++||..++.+...        ...+..          ..
T Consensus        80 ~ag~~--------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~--------~~~~~~----------~~  125 (221)
T 3r6d_A           80 GAMES--------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPV--------ALEKWT----------FD  125 (221)
T ss_dssp             SCCCC--------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCH--------HHHHHH----------HH
T ss_pred             cCCCC--------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCc--------cccccc----------cc
Confidence            99853              233 889999999998 899999999884432111        000000          00


Q ss_pred             chhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          166 EYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                      ...+.|+.+|..+|.+++.   .+++++++||+.++++.....  ...        ....      ...      ...++
T Consensus       126 ~~~~~y~~~K~~~e~~~~~---~~i~~~~vrpg~v~~~~~~~~--~~~--------~~~~------~~~------~~~~~  180 (221)
T 3r6d_A          126 NLPISYVQGERQARNVLRE---SNLNYTILRLTWLYNDPEXTD--YEL--------IPEG------AQF------NDAQV  180 (221)
T ss_dssp             TSCHHHHHHHHHHHHHHHH---SCSEEEEEEECEEECCTTCCC--CEE--------ECTT------SCC------CCCEE
T ss_pred             ccccHHHHHHHHHHHHHHh---CCCCEEEEechhhcCCCCCcc--eee--------ccCC------ccC------CCcee
Confidence            0012799999999999874   579999999999998732221  000        0000      000      33489


Q ss_pred             cHHHHHHHHHHhh--cCCCC--CceEEEec
Q 019415          246 HIDDVCEAHIFCM--EKPSM--SGRFFCTN  271 (341)
Q Consensus       246 ~v~D~a~~~~~~~--~~~~~--~g~~n~~~  271 (341)
                      +.+|+|+++..++  ..+..  .+.+.+.+
T Consensus       181 ~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~  210 (221)
T 3r6d_A          181 SREAVVKAIFDILHAADETPFHRTSIGVGE  210 (221)
T ss_dssp             EHHHHHHHHHHHHTCSCCGGGTTEEEEEEC
T ss_pred             eHHHHHHHHHHHHHhcChhhhhcceeeecC
Confidence            9999999999999  76542  23566654

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.93  E-value=9.7e-24  Score=182.84  Aligned_cols=221  Identities=14%  Similarity=0.065  Sum_probs=160.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +....... +.+..   ...++.++.+|++|++++.++++     
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADL-DEAMATKAVEDLRM---EGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 75432211 22222   12478999999999998888875     


Q ss_pred             --CCCEEEEeccCCc-cc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQ-HI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~-~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        ++|+|||+||... ..     ..+.++..+++|+.++.++++++..    .+ ..++|++||..+..+...       
T Consensus        88 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~-------  159 (260)
T 3awd_A           88 EGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRP-------  159 (260)
T ss_dssp             HSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSS-------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCC-------
Confidence              6899999999754 21     1344568899999999999988764    34 689999999875432111       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         .+...|+.+|...|.+++.++ +   .|++++++||+.++++.....  .  ..+.+...+
T Consensus       160 -------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~--~--~~~~~~~~~  216 (260)
T 3awd_A          160 -------------------QQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFG--M--EKPELYDAW  216 (260)
T ss_dssp             -------------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHH--H--TCHHHHHHH
T ss_pred             -------------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcc--c--CChHHHHHH
Confidence                               123789999999999999887 4   589999999999999854311  0  011122222


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ....       .      ...+++++|+|+++..++...  ...| .|++.++.
T Consensus       217 ~~~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          217 IAGT-------P------MGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHTC-------T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HhcC-------C------cCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            1110       0      345889999999999998653  2345 78887764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.93  E-value=2e-24  Score=191.33  Aligned_cols=236  Identities=11%  Similarity=0.089  Sum_probs=167.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +....... +.+...  ....+.++.+|+++++++.++++     
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR-KMDVLKATAEQISSQ--TGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh--cCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 75432211 112111  02478999999999998887775     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+||.....     ..+.++..+++|+.++.++++++...    ....+||++||..+..+..         
T Consensus       102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  172 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG---------  172 (302)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT---------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC---------
Confidence              469999999965431     14456789999999999998887532    1257999999987555321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         +...|+.+|...|.+++.++ +   .|++++++|||.++++...... .+...  ....+.
T Consensus       173 -------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~--~~~~~~  230 (302)
T 1w6u_A          173 -------------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL-DPTGT--FEKEMI  230 (302)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C-CTTSH--HHHHHH
T ss_pred             -------------------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhc-ccchh--hHHHHH
Confidence                               25789999999999999887 4   5899999999999987322110 01100  111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc-cCHHHHHHHHHHhC
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF-VSSAEIASCLQQNY  287 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~-~s~~e~~~~i~~~~  287 (341)
                      ...       .      ...+++++|+|+++..++....  ..| +|++.++. +++.|+++.+.+..
T Consensus       231 ~~~-------p------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~  285 (302)
T 1w6u_A          231 GRI-------P------CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVT  285 (302)
T ss_dssp             TTC-------T------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCC
T ss_pred             hcC-------C------cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhc
Confidence            110       0      3457889999999999986532  245 78998764 78888887777665

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.93  E-value=9.4e-25  Score=188.95  Aligned_cols=219  Identities=14%  Similarity=0.145  Sum_probs=159.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCC-CCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPN-LEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| + ....... ..+..   ...++.++.+|++|++++.++++    
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGR-KAPANIDETIASMRA---DGGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCCTTHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECC-CchhhHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999 7 4432221 12222   12478999999999999888887    


Q ss_pred             ---CCCEEEEeccC-Cccc-----cchhHhHhhhhhhhHHHHHHHHHHhc--------CCcCEEEEeccccccc-CCCCC
Q 019415           79 ---GCDFVFHVATP-LQHI-----DGYLYKNVVEACVGAAKKIASFCVKS--------GTVKRLIYTASVLCAS-PLKED  140 (341)
Q Consensus        79 ---~~d~Vi~~a~~-~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--------~~~~~~I~~Ss~~~~~-~~~~~  140 (341)
                         ++|+|||+||. ....     ..+.++..+++|+.++.++++++...        +...++|++||..+.. +.   
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---  158 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG---  158 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCC---
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCC---
Confidence               79999999996 3221     13445688999999999998876432        1126899999987543 21   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                               .+...|+.+|...|.+++.++ +   .|++++++||+.++++.....      ..
T Consensus       159 -------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~  207 (258)
T 3afn_B          159 -------------------------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK------TQ  207 (258)
T ss_dssp             -------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC------CH
T ss_pred             -------------------------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc------CH
Confidence                                     125789999999999998876 3   389999999999999854322      12


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC---CCCc-eEEEecccc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP---SMSG-RFFCTNVFV  274 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~g-~~n~~~~~~  274 (341)
                      .+...+....       .      ...+++++|+|+++..++...   ...| +|++.++..
T Consensus       208 ~~~~~~~~~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          208 DVRDRISNGI-------P------MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHHHHHTTC-------T------TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             HHHHHHhccC-------C------CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCcc
Confidence            2222222111       1      456899999999999998753   2345 788887643

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.93  E-value=2.8e-24  Score=184.71  Aligned_cols=217  Identities=16%  Similarity=0.144  Sum_probs=161.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|++|||||+|+||+++++.|+++|++|++++| +...  ..+.+ ..+.....++.++++|++|++++.++++     
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYA-GSKE--KAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CCHH--HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999887 5422  11111 1111123478899999999998888776     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||..+..+..         
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  149 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNP---------  149 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC---------
Confidence              7899999999764321     4556789999999999999998    4555 67999999988666432         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         +...|+.||...+.+.+.++    ..|+++.+++||.+.++.....      .+.....+.
T Consensus       150 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~------~~~~~~~~~  204 (246)
T 3osu_A          150 -------------------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL------SDELKEQML  204 (246)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS------CHHHHHHHH
T ss_pred             -------------------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc------CHHHHHHHH
Confidence                               25789999999999888876    3489999999999998864432      223333322


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ...       .      ...+.+.+|+|+++.+++....  ..| +|++.++
T Consensus       205 ~~~-------p------~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          205 TQI-------P------LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             TTC-------T------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hcC-------C------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            221       0      4457789999999999987543  345 7888765

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.93  E-value=6.7e-25  Score=183.57  Aligned_cols=192  Identities=14%  Similarity=0.097  Sum_probs=149.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhc---CCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQ---GCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   82 (341)
                      |+||||||+|+||+++++.|+++  +|++++| +...   .+.+.. +.    . +++.+|++|++++.++++   ++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r-~~~~---~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGR-RAGA---LAELAREVG----A-RALPADLADELEAKALLEEAGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECS-CHHH---HHHHHHHHT----C-EECCCCTTSHHHHHHHHHHHCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEEC-CHHH---HHHHHHhcc----C-cEEEeeCCCHHHHHHHHHhcCCCCE
Confidence            58999999999999999999998  9999999 6533   222211 11    2 789999999999999988   8999


Q ss_pred             EEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPP  157 (341)
Q Consensus        83 Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (341)
                      |||+||.....     ..+.++..+++|+.++.++++++.+.+ .++||++||..++.+.                    
T Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~~--------------------  128 (207)
T 2yut_A           70 LVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQV--------------------  128 (207)
T ss_dssp             EEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHSS--------------------
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccCC--------------------
Confidence            99999976432     144567899999999999999997766 7899999999865432                    


Q ss_pred             CCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccccccc
Q 019415          158 DHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLR  233 (341)
Q Consensus       158 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (341)
                              .+...|+.+|...|.+++.++ +   .|++++++||+.++++....                       ...
T Consensus       129 --------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~-----------------------~~~  177 (207)
T 2yut_A          129 --------PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP-----------------------LGG  177 (207)
T ss_dssp             --------TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG-----------------------GTS
T ss_pred             --------CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc-----------------------cCC
Confidence                    125789999999999999887 4   59999999999998863100                       001


Q ss_pred             chhhccCCCCcccHHHHHHHHHHhhcCCCCCceE
Q 019415          234 DTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRF  267 (341)
Q Consensus       234 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~  267 (341)
                      .      .+.+++++|+|++++.+++++....++
T Consensus       178 ~------~~~~~~~~dva~~~~~~~~~~~~~~~~  205 (207)
T 2yut_A          178 P------PKGALSPEEAARKVLEGLFREPVPALL  205 (207)
T ss_dssp             C------CTTCBCHHHHHHHHHHHHC--CCCSCC
T ss_pred             C------CCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence            1      577999999999999999876544343

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=2.4e-24  Score=184.54  Aligned_cols=206  Identities=18%  Similarity=0.115  Sum_probs=156.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------C
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------G   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~   79 (341)
                      +|+||||||+|+||+++++.|+++|++|++++| +...              ..+.++.+|+++++++.++++      +
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~--------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDL-RREG--------------EDLIYVEGDVTREEDVRRAVARAQEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEES-SCCS--------------SSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcc-Cccc--------------cceEEEeCCCCCHHHHHHHHHHHHhhCC
Confidence            478999999999999999999999999999999 6431              256889999999999988887      7


Q ss_pred             CCEEEEeccCCcccc-----c----hhHhHhhhhhhhHHHHHHHHHHhcC---------CcCEEEEecccccccCCCCCC
Q 019415           80 CDFVFHVATPLQHID-----G----YLYKNVVEACVGAAKKIASFCVKSG---------TVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-----~----~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                      +|++||+|+......     .    +.++..+++|+.++.++++++....         ...+||++||..++.+..   
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---  143 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---  143 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT---
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC---
Confidence            899999999755322     1    1567899999999999999887542         013999999998655321   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                               +...|+.+|...+.+.+.++ +   .|++++++|||.++++.....      ...
T Consensus       144 -------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~  192 (242)
T 1uay_A          144 -------------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL------PEK  192 (242)
T ss_dssp             -------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS------CHH
T ss_pred             -------------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc------chh
Confidence                                     25789999999999988876 3   489999999999998753321      112


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      +...+....+.            ...+++++|+|+++..++......| .|++.++
T Consensus       193 ~~~~~~~~~~~------------~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG  236 (242)
T 1uay_A          193 AKASLAAQVPF------------PPRLGRPEEYAALVLHILENPMLNGEVVRLDGA  236 (242)
T ss_dssp             HHHHHHTTCCS------------SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHhhCCC------------cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCC
Confidence            22222211110            1457899999999999998755566 7888765

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.92  E-value=6.4e-24  Score=186.16  Aligned_cols=238  Identities=16%  Similarity=0.106  Sum_probs=163.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc---------hhhhhHh-hhCCCCCCceEEEecCCCCh
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED---------KSKVDLL-KSLPGAETRLIFFEAEIYDP   70 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~Dl~~~   70 (341)
                      |...+++++|||||+|+||+++++.|+++|++|++++| +...         ....+.. ..+......+.++.+|++|+
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDR-CENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC-CccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            45556789999999999999999999999999999999 7431         1222211 11112235789999999999


Q ss_pred             HHHHHHhc-------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccc
Q 019415           71 DTFENAIQ-------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCA  134 (341)
Q Consensus        71 ~~~~~~~~-------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~  134 (341)
                      +++.++++       ++|++||+||.....     ..+.++..+++|+.++.++++++    ++.+ ..++|++||..++
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  162 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGH  162 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhc
Confidence            98888776       799999999976532     14556789999999999999986    3344 5799999998755


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCC
Q 019415          135 SPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSS  210 (341)
Q Consensus       135 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~  210 (341)
                      .+..                            +...|+.||...+.+.+.++ +   +|+++..++||.|+++.....  
T Consensus       163 ~~~~----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--  212 (281)
T 3s55_A          163 SANF----------------------------AQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHND--  212 (281)
T ss_dssp             SCCT----------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSH--
T ss_pred             CCCC----------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccch--
Confidence            4321                            25789999999999999887 4   489999999999999864321  


Q ss_pred             CCchhhhhHhhHhcCcc-ccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          211 TPVSVIGGLCQLTNNEY-VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       211 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                        .....+......... .... ...........+.+++|+|+++++++....  ..| ++++.++.
T Consensus       213 --~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~  276 (281)
T 3s55_A          213 --FVFGTMRPDLEKPTLKDVES-VFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGA  276 (281)
T ss_dssp             --HHHHC-------CCHHHHHH-HHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             --hhhccccccccccchhHHHH-HHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence              000000000000000 0000 000000114678999999999999997543  346 78887753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.92  E-value=9.3e-24  Score=184.95  Aligned_cols=228  Identities=13%  Similarity=0.148  Sum_probs=157.5

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCC-CCCceEEEecCCCChHHHHHHhc--
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPG-AETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      ..+++++|||||+|+||+++++.|+++|++|++++| +...  ..+.+ ..+.. ....+.++.+|++|++++.++++  
T Consensus        22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r-~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGF-GAPD--EIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECC-CCHH--HHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CChH--HHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            345679999999999999999999999999999988 5432  11111 11111 13578999999999998888776  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||..+..+..      
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  171 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASP------  171 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT------
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCC------
Confidence                 7899999999765432     4556788999999999999987    4444 57999999987654322      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.||...+.+.+.++ +   .|+++..++||.|.++.....  .+....  ..
T Consensus       172 ----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~--~~  225 (281)
T 3v2h_A          172 ----------------------FKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ--IPDQAR--TR  225 (281)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------------------
T ss_pred             ----------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh--cchhhh--hc
Confidence                                  24789999999999998887 3   489999999999998754332  111000  00


Q ss_pred             hHhcCc---cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          221 QLTNNE---YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~---~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ......   ..+....      ....+++++|+|++++.++....  ..| ++++.++
T Consensus       226 ~~~~~~~~~~~~~~~~------p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          226 GITEEQVINEVMLKGQ------PTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             --------------CC------TTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHhcC------CCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence            000000   0011111      16679999999999999987543  356 7787665

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=6.7e-24  Score=181.23  Aligned_cols=201  Identities=18%  Similarity=0.161  Sum_probs=138.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++|+||||||+|+||+++++.|++.| ++|++++| +....      ..+  ...+++++.+|++|++++.++++++|+|
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R-~~~~~------~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~v   92 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFAR-QPAKI------HKP--YPTNSQIIMGDVLNHAALKQAMQGQDIV   92 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEES-SGGGS------CSS--CCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEc-Chhhh------ccc--ccCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence            35789999999999999999999999 89999999 75431      111  1247999999999999999999999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+|+....             ...+.++++++++.+ +++|||+||..++.+....     ..+..+..          
T Consensus        93 v~~a~~~~~-------------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~-----~~~~~~~~----------  143 (236)
T 3qvo_A           93 YANLTGEDL-------------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGK-----FVEWNNAV----------  143 (236)
T ss_dssp             EEECCSTTH-------------HHHHHHHHHHHHHTT-CCEEEEECCCCC------------------------------
T ss_pred             EEcCCCCch-------------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcc-----cccchhhc----------
Confidence            999985321             134668999999998 8999999999854432110     11222221          


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                      ...+...|..    +|..++   +.|++++++||+.++++.....       .    ......      ..      ...
T Consensus       144 ~~~~~~~~~~----~~~~l~---~~gi~~~~vrPg~i~~~~~~~~-------~----~~~~~~------~~------~~~  193 (236)
T 3qvo_A          144 IGEPLKPFRR----AADAIE---ASGLEYTILRPAWLTDEDIIDY-------E----LTSRNE------PF------KGT  193 (236)
T ss_dssp             -CGGGHHHHH----HHHHHH---TSCSEEEEEEECEEECCSCCCC-------E----EECTTS------CC------SCS
T ss_pred             ccchHHHHHH----HHHHHH---HCCCCEEEEeCCcccCCCCcce-------E----EeccCC------CC------CCc
Confidence            1122344444    455554   4589999999999998743221       0    000000      00      245


Q ss_pred             cccHHHHHHHHHHhhcCCC--CCceEEEeccc
Q 019415          244 LVHIDDVCEAHIFCMEKPS--MSGRFFCTNVF  273 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~--~~g~~n~~~~~  273 (341)
                      +++++|+|++++.++..+.  .+.+|+++++.
T Consensus       194 ~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~  225 (236)
T 3qvo_A          194 IVSRKSVAALITDIIDKPEKHIGENIGINQPG  225 (236)
T ss_dssp             EEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred             EECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence            8999999999999998766  34488988754

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.92  E-value=3.3e-24  Score=184.45  Aligned_cols=221  Identities=15%  Similarity=0.088  Sum_probs=159.4

Q ss_pred             CCCC-CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHK-SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~-~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |+.. ++++||||||+|+||+++++.|+++|++|++++| +....... ..+...  ....+.++.+|++|++++.++++
T Consensus         1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~   77 (248)
T 2pnf_A            1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGT-SGERAKAVAEEIANK--YGVKAHGVEMNLLSEESINKAFE   77 (248)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhh--cCCceEEEEccCCCHHHHHHHHH
Confidence            5532 4688999999999999999999999999999999 75432221 111110  12368899999999999888876


Q ss_pred             -------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                             ++|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .++||++||..++++..    
T Consensus        78 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----  152 (248)
T 2pnf_A           78 EIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNV----  152 (248)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCT----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCC----
Confidence                   799999999976532     13455688999999997776654    4455 68999999987665322    


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                              +...|+.+|...|.+.+.++ +   .+++++++||+.++++.....      ...+
T Consensus       153 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~------~~~~  202 (248)
T 2pnf_A          153 ------------------------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL------SEEI  202 (248)
T ss_dssp             ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS------CHHH
T ss_pred             ------------------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc------cHHH
Confidence                                    14789999999999998876 3   489999999999988743221      1111


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ........       .      ...+++++|+|+++..++...  ...| +|++.++
T Consensus       203 ~~~~~~~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          203 KQKYKEQI-------P------LGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             HHHHHHTC-------T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhcC-------C------CCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            11111110       0      345889999999999998753  2345 7888765

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.92  E-value=1.6e-23  Score=183.56  Aligned_cols=233  Identities=11%  Similarity=0.004  Sum_probs=162.4

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC----------chhhhhHhh-hCCCCCCceEEEecCCCC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE----------DKSKVDLLK-SLPGAETRLIFFEAEIYD   69 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~~-~~~~~~~~~~~~~~Dl~~   69 (341)
                      |...+++++|||||+|+||+++++.|+++|++|++++| +..          +....+.+. .+......+.++.+|++|
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~   88 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDI-CAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD   88 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC-CSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec-cccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC
Confidence            33445689999999999999999999999999999988 532          222222221 122234578999999999


Q ss_pred             hHHHHHHhc-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEeccccc
Q 019415           70 PDTFENAIQ-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLC  133 (341)
Q Consensus        70 ~~~~~~~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~  133 (341)
                      ++++.++++       ++|++||+||......     .+.++..+++|+.++.++++++..    .+...++|++||..+
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG  168 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh
Confidence            998888775       6899999999865432     455678899999999999998743    222368999999876


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCC
Q 019415          134 ASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYS  209 (341)
Q Consensus       134 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~  209 (341)
                      +.+..                            ....|+.||...+.+.+.++ +   +|+++..++||.|.++..... 
T Consensus       169 ~~~~~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-  219 (280)
T 3pgx_A          169 LKATP----------------------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE-  219 (280)
T ss_dssp             TSCCT----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH-
T ss_pred             ccCCC----------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh-
Confidence            54322                            25789999999999999887 4   589999999999998854321 


Q ss_pred             CCCchhhhhHhhHhcCcc-ccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          210 STPVSVIGGLCQLTNNEY-VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                         .....+......... ......       ...+++++|+|+++.+++....  ..| ++++.++.
T Consensus       220 ---~~~~~~~~~~~~~~~~~~~~~~-------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          220 ---AMMEIFARHPSFVHSFPPMPVQ-------PNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             ---HHHHHHHHCGGGGGGSCCBTTB-------CSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             ---hhhhhhhcCchhhhhhhhcccC-------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence               001111110000000 001111       2248899999999999986533  456 77887664

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.92  E-value=6.5e-24  Score=182.86  Aligned_cols=218  Identities=15%  Similarity=0.090  Sum_probs=157.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC-CCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL-PGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +|+||||||+|+||+++++.|+++|++|++++| +........  ..+ .....++.++.+|++|++++.++++      
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDL-SAETLEETA--RTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF   78 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999 754322211  111 1223478999999999998888876      


Q ss_pred             -CCCEEEEeccCCccc--------cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI--------DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                       ++|+|||+||.....        ..+.++..+++|+.++.++++++.    +.+ .+++|++||..++.+..       
T Consensus        79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-------  150 (250)
T 2cfc_A           79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFP-------  150 (250)
T ss_dssp             SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred             CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC-------
Confidence             799999999975432        134567889999999987766653    445 68999999987554321       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           +...|+.+|...|.+++.++ +   .|++++++||+.++++.....  ..  ...+...
T Consensus       151 ---------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~--~~~~~~~  205 (250)
T 2cfc_A          151 ---------------------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR--LD--QPELRDQ  205 (250)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH--HT--SHHHHHH
T ss_pred             ---------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc--cC--CHHHHHH
Confidence                                 24789999999999999886 3   389999999999999853321  00  0112121


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      +....       .      ...+.+.+|+|+++..++..+.  ..| .+++.++
T Consensus       206 ~~~~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          206 VLARI-------P------QKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             HHTTC-------T------TCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             HHhcC-------C------CCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence            21110       0      3457899999999999987643  346 6777665

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.92  E-value=1.2e-23  Score=181.90  Aligned_cols=217  Identities=13%  Similarity=0.043  Sum_probs=155.2

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .+++++|||||+|+||+++++.|++.|++|++++| +........  ..   ....+.++.+|++|++++.++++     
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~--~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDL-KPPAGEEPA--AE---LGAAVRFRNADVTNEADATAALAFAKQE   78 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-SCC-----------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHH--HH---hCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999 765422111  11   12478899999999998888876     


Q ss_pred             --CCCEEEEeccCCccc---------cchhHhHhhhhhhhHHHHHHHHHHhc---------CCcCEEEEecccccccCCC
Q 019415           79 --GCDFVFHVATPLQHI---------DGYLYKNVVEACVGAAKKIASFCVKS---------GTVKRLIYTASVLCASPLK  138 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~I~~Ss~~~~~~~~  138 (341)
                        ++|++||+||.....         ..+.++..+++|+.++.++++++...         +...++|++||..++.+..
T Consensus        79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~  158 (257)
T 3tpc_A           79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI  158 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC
Confidence              799999999976432         13556789999999999999988754         1146899999998665432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch
Q 019415          139 EDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS  214 (341)
Q Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~  214 (341)
                                                  ....|+.||...+.+.+.++ +   .|+++.+++||.|.++.....      
T Consensus       159 ----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~------  204 (257)
T 3tpc_A          159 ----------------------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM------  204 (257)
T ss_dssp             ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------
T ss_pred             ----------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC------
Confidence                                        25789999999999988876 4   589999999999988754322      


Q ss_pred             hhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          215 VIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      .......+....+.            ...+.+++|+|+++..++......| ++++.++
T Consensus       205 ~~~~~~~~~~~~p~------------~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tpc_A          205 PQDVQDALAASVPF------------PPRLGRAEEYAALVKHICENTMLNGEVIRLDGA  251 (257)
T ss_dssp             ---------CCSSS------------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             CHHHHHHHHhcCCC------------CCCCCCHHHHHHHHHHHcccCCcCCcEEEECCC
Confidence            11111111111000            1457889999999999998766677 6777665

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.92  E-value=7.5e-24  Score=183.75  Aligned_cols=222  Identities=16%  Similarity=0.130  Sum_probs=163.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |...+++++|||||+|+||+++++.|+++|++|++++| +....... ..+...  ....+.++.+|++|+++++++++ 
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~v~~~~~~   81 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGR-STADIDACVADLDQL--GSGKVIGVQTDVSDRAQCDALAGR   81 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTT--SSSCEEEEECCTTSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh--CCCcEEEEEcCCCCHHHHHHHHHH
Confidence            44456789999999999999999999999999999999 76442222 122221  11478999999999998887775 


Q ss_pred             ------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccc-cCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCA-SPLKEDGS  142 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~-~~~~~~~~  142 (341)
                            ++|++||+||......     .+.++..+++|+.++.++++++...    + ..++|++||.... .+.     
T Consensus        82 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----  155 (262)
T 3pk0_A           82 AVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGY-----  155 (262)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCC-----
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCC-----
Confidence                  7999999999765321     4556788999999999998887664    5 6899999998643 221     


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                             .....|+.||...+.+.+.++ +   +|+++..++||.|+++.....      ....
T Consensus       156 -----------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~------~~~~  206 (262)
T 3pk0_A          156 -----------------------PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN------GEEY  206 (262)
T ss_dssp             -----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT------CHHH
T ss_pred             -----------------------CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc------CHHH
Confidence                                   125789999999999999887 4   599999999999988743221      1122


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ...+....+             ...+...+|+|+++.+++....  ..| ++++.++.
T Consensus       207 ~~~~~~~~p-------------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~  251 (262)
T 3pk0_A          207 IASMARSIP-------------AGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQ  251 (262)
T ss_dssp             HHHHHTTST-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            222221110             3347789999999999986532  456 77887653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.92  E-value=2e-24  Score=189.41  Aligned_cols=239  Identities=15%  Similarity=0.161  Sum_probs=170.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +....... +.+.........+.++.+|++|++++.++++     
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGR-NPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999999 76442222 2233322222378999999999988887775     


Q ss_pred             --CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC---CcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG---TVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||.....      ..+.++..+++|+.++.++++++....   .-.+||++||..++.+..         
T Consensus        89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  159 (281)
T 3svt_A           89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR---------  159 (281)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT---------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC---------
Confidence              689999999973221      144567899999999999999876542   135999999988655322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.||...+.+.+.++ +   .|+++.+++||.|.++.....  .  ........+.
T Consensus       160 -------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~--~~~~~~~~~~  216 (281)
T 3svt_A          160 -------------------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI--T--ESAELSSDYA  216 (281)
T ss_dssp             -------------------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--H--TCHHHHHHHH
T ss_pred             -------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc--c--cCHHHHHHHH
Confidence                               24689999999999999887 3   379999999999988742211  0  0001111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc-cC-HHHHHHHHHHhCCC
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF-VS-SAEIASCLQQNYPE  289 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~-~s-~~e~~~~i~~~~~~  289 (341)
                      ..       .      ....+.+++|+|+++.+++....  ..| ++++.++. ++ ..++++.+.+.++.
T Consensus       217 ~~-------~------p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~  274 (281)
T 3svt_A          217 MC-------T------PLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGR  274 (281)
T ss_dssp             HH-------C------SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCT
T ss_pred             hc-------C------CCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCC
Confidence            00       0      14557889999999999987532  345 78887754 44 77888888877643

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.92  E-value=2.2e-23  Score=180.55  Aligned_cols=213  Identities=14%  Similarity=0.120  Sum_probs=156.4

Q ss_pred             CCC-CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDH-KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~-~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |.. .++++||||||+|+||+++++.|+++|++|++++| +.......  ...+.   ..+.++.+|++|++++.++++ 
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~---~~~~~~~~D~~~~~~v~~~~~~   74 (260)
T 1nff_A            1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI-LDEEGKAM--AAELA---DAARYVHLDVTQPAQWKAAVDT   74 (260)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHTG---GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHhh---cCceEEEecCCCHHHHHHHHHH
Confidence            543 24689999999999999999999999999999999 65432211  11221   258889999999999888887 


Q ss_pred             ------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                            ++|++||+||.....     ..+.++..+++|+.++.+++++    +++.+ ..++|++||..++.+..     
T Consensus        75 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  148 (260)
T 1nff_A           75 AVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTV-----  148 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCC-----
Confidence                  799999999976432     1445678999999999766555    44555 68999999988554321     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                             +...|+.+|...+.+.+.++ +   .|++++++|||.++++.....   +       
T Consensus       149 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-------  195 (260)
T 1nff_A          149 -----------------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV---P-------  195 (260)
T ss_dssp             -----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS---C-------
T ss_pred             -----------------------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccc---h-------
Confidence                                   24789999999999998876 3   589999999999998743210   0       


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                           ....  . ..      ...+++++|+|+++..++....  ..| .|++.++
T Consensus       196 -----~~~~--~-~~------~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          196 -----EDIF--Q-TA------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             -----TTCS--C-CS------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----hhHH--h-Cc------cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence                 0000  0 00      3457889999999999986532  345 7888775

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.92  E-value=6.1e-24  Score=183.47  Aligned_cols=219  Identities=15%  Similarity=0.121  Sum_probs=155.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCce-EEEecCCCChHHHHHHh------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRL-IFFEAEIYDPDTFENAI------   77 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~~~------   77 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +.......  ...+   ...+ .++.+|++|++.+.+++      
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~--~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDR-EAAALDRA--AQEL---GAAVAARIVADVTDAEAMTAAAAEAEAV   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHH---GGGEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHh---cccceeEEEEecCCHHHHHHHHHHHHhh
Confidence            3578999999999999999999999999999999 75432211  1111   1255 88999999999888776      


Q ss_pred             cCCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           78 QGCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        78 ~~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      .++|+|||+||......     .+.++..+++|+.++.++++++    ++.+ .++||++||..++.+...         
T Consensus        84 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~---------  153 (254)
T 2wsb_A           84 APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRP---------  153 (254)
T ss_dssp             SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSS---------
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCC---------
Confidence            47899999999755421     3445688999999977776665    4455 689999999875442211         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .+...|+.+|...|.+++.++ +   .|++++++||+.++++.....   .. .+.+...+..
T Consensus       154 -----------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~---~~-~~~~~~~~~~  212 (254)
T 2wsb_A          154 -----------------QFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKM---RE-RPELFETWLD  212 (254)
T ss_dssp             -----------------SCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHH---HT-CHHHHHHHHH
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcc---cc-ChHHHHHHHh
Confidence                             124789999999999998876 3   389999999999998742210   00 0111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ..       .      ...+++++|+|+++..++...  ...| .+++.++.
T Consensus       213 ~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          213 MT-------P------MGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             TS-------T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cC-------C------CCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence            10       0      345889999999999998653  2345 77887653

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.92  E-value=5.1e-24  Score=182.90  Aligned_cols=216  Identities=16%  Similarity=0.170  Sum_probs=153.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ecCCCCchhhh-hHhhhCCCCCCceEE-EecCCCChHHHHHHhc----
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LRPNLEDKSKV-DLLKSLPGAETRLIF-FEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~----   78 (341)
                      +|+||||||+|+||+++++.|+++|++|+++ .| +....... +.+..   ....+.+ +.+|+++++.+.++++    
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQ-NREKAEEVAEEARR---RGSPLVAVLGANLLEAEAATALVHQAAE   76 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESS-CHHHHHHHHHHHHH---TTCSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHh---cCCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            3689999999999999999999999999998 67 54332221 11222   1235666 8999999988887754    


Q ss_pred             ---CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHH----HHHHhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIA----SFCVKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~----~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|+|||+||.....     ..+.++..+++|+.++.+++    +.+++.+ .++||++||..++++..        
T Consensus        77 ~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~--------  147 (245)
T 2ph3_A           77 VLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNP--------  147 (245)
T ss_dssp             HHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCS--------
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCC--------
Confidence               799999999976432     14456788999999955554    4555566 78999999987665422        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          +...|+.+|...+.+.+.++ +   .|++++++||+.++++.....      ...+...+
T Consensus       148 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~  201 (245)
T 2ph3_A          148 --------------------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL------PQEVKEAY  201 (245)
T ss_dssp             --------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS------CHHHHHHH
T ss_pred             --------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc------CHHHHHHH
Confidence                                14789999999999888876 3   389999999999988743211      11111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ....       .      ...+++++|+|+++..++....  ..| .|++.++.
T Consensus       202 ~~~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          202 LKQI-------P------AGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHTC-------T------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HhcC-------C------CCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            1110       0      3458899999999999987532  345 78887764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.92  E-value=4.3e-24  Score=186.49  Aligned_cols=224  Identities=17%  Similarity=0.099  Sum_probs=158.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +...  ..+.+ ..+......+.++.+|++|++.+.++++     
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r-~~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG-SSSK--AAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcC-CchH--HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999988 4322  12111 1111123478899999999998888876     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccc-cCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCA-SPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~-~~~~~~~~~~~~~~~  149 (341)
                        ++|+|||+||.....     ..+.++..+++|+.++.++++++...- +-.+||++||..++ .+.            
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~------------  164 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI------------  164 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC------------
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC------------
Confidence              789999999976432     134456889999999999999887651 01699999998755 221            


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC--CCCC----chh-hhh
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY--SSTP----VSV-IGG  218 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~--~~~~----~~~-~~~  218 (341)
                                      .....|+.+|...|.+++.++ +   .+++++++|||.++++.....  ...+    ... ...
T Consensus       165 ----------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  228 (274)
T 1ja9_A          165 ----------------PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKI  228 (274)
T ss_dssp             ----------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHH
T ss_pred             ----------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHH
Confidence                            124789999999999999886 3   389999999999987632210  0000    000 001


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ...+       ..      +.....+++++|+|+++..++....  ..| +|+++++
T Consensus       229 ~~~~-------~~------~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          229 DEGL-------AN------MNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             HHHH-------HH------TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHH-------Hh------cCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            1100       01      1115679999999999999997532  245 8898775

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.92  E-value=1e-22  Score=177.42  Aligned_cols=216  Identities=13%  Similarity=0.060  Sum_probs=162.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +.........  .+   ...+.++.+|++|++++.++++      
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADL-PETDLAGAAA--SV---GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-TTSCHHHHHH--HH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHH--Hh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999999999 7654332221  11   2478899999999998888876      


Q ss_pred             -CCCEEEEeccCCcc-c------cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQH-I------DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~-~------~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ++|++||+||.... .      ..+.++..+++|+.++.++++++    ++.+ ..++|++||..++.+..        
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------  154 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYD--------  154 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCS--------
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCC--------
Confidence             79999999997632 1      14556789999999999999998    5555 68999999988654322        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.||...+.+.+.++ +   +|+++.+++||.|+++.....  .   .......+
T Consensus       155 --------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~---~~~~~~~~  209 (271)
T 3tzq_B          155 --------------------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVG--L---PQPIVDIF  209 (271)
T ss_dssp             --------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC--------CHHHHHHH
T ss_pred             --------------------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccccc--C---CHHHHHHH
Confidence                                25789999999999999887 4   589999999999999865422  1   11222222


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ....       .      ...+...+|+|+++.+++....  ..| ++++.++.
T Consensus       210 ~~~~-------~------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          210 ATHH-------L------AGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             HTTS-------T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HhcC-------C------CCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence            2111       0      3447789999999999987532  456 77887763

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.92  E-value=2.1e-23  Score=179.75  Aligned_cols=221  Identities=15%  Similarity=0.101  Sum_probs=156.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |+..++++||||||+|+||+++++.|+++|++|++++| +.......  ...+.. ...++++.+|+++++++.++++  
T Consensus         1 ~~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   76 (251)
T 1zk4_A            1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGEKA--AKSVGT-PDQIQFFQHDSSDEDGWTKLFDAT   76 (251)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHHCC-TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHhhc-cCceEEEECCCCCHHHHHHHHHHH
Confidence            34445689999999999999999999999999999999 75432221  111111 1478999999999998887776  


Q ss_pred             -----CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCc-CEEEEecccccccCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTV-KRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~-~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                           ++|+|||+||.....     ..+.++..+++|+.++.++.+++    ++.+ . ++||++||..++.+..     
T Consensus        77 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~-----  150 (251)
T 1zk4_A           77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGDP-----  150 (251)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCCT-----
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCCC-----
Confidence                 489999999975432     14455789999999887766554    4455 5 7999999987554321     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc------cCCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG------SSGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~------~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                             +...|+.+|...|.+++.++      ..+++++++||+.++++.....   +.  ..
T Consensus       151 -----------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~---~~--~~  202 (251)
T 1zk4_A          151 -----------------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL---PG--AE  202 (251)
T ss_dssp             -----------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS---TT--HH
T ss_pred             -----------------------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc---Cc--hh
Confidence                                   24789999999999888765      3489999999999998743211   00  00


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ....+.       ....      ...+++++|+|+++..++....  ..| .+++.++
T Consensus       203 ~~~~~~-------~~~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  247 (251)
T 1zk4_A          203 EAMSQR-------TKTP------MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             HHHTST-------TTCT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhHHHh-------hcCC------CCCCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence            000000       0000      3458899999999999987532  345 7788765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.92  E-value=7.5e-24  Score=182.13  Aligned_cols=219  Identities=16%  Similarity=0.082  Sum_probs=148.6

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |+ .++|+||||||+|+||+++++.|+++|++|+++ .| +....... ..+..   ....+.++.+|++|++.+.++++
T Consensus         1 M~-l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~   75 (247)
T 2hq1_A            1 MQ-LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSP-ASTSLDATAEEFKA---AGINVVVAKGDVKNPEDVENMVK   75 (247)
T ss_dssp             CT-TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECT-TCSHHHHHHHHHHH---TTCCEEEEESCTTSHHHHHHHHH
T ss_pred             CC-CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCc-CHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHH
Confidence            54 346899999999999999999999999999998 45 44332211 12222   12478999999999998888776


Q ss_pred             -------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                             ++|+|||+||.....     ..+.++..+++|+.++.++++++..    .+ ..+||++||..+.++..    
T Consensus        76 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----  150 (247)
T 2hq1_A           76 TAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNA----  150 (247)
T ss_dssp             HHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC------------
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCC----
Confidence                   799999999976432     1334568899999998888887654    45 68999999986555321    


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                              ....|+.+|...|.+++.++ +   .++++++++|+.+.++.....      ....
T Consensus       151 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~  200 (247)
T 2hq1_A          151 ------------------------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL------PDKV  200 (247)
T ss_dssp             -------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS------CHHH
T ss_pred             ------------------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc------chHH
Confidence                                    24789999999999998886 3   389999999999976532111      1111


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...+...       ..      ...+++++|+|+++..++...  ...| +|++.++
T Consensus       201 ~~~~~~~-------~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          201 KEMYLNN-------IP------LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             HHHHHTT-------ST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhh-------CC------CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            1111111       01      456889999999999988653  2345 8898775

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.92  E-value=5.5e-23  Score=178.58  Aligned_cols=215  Identities=15%  Similarity=0.079  Sum_probs=157.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +........  ..+   ...+.++.+|+++++++.++++      
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDL-PNSGGEAQA--KKL---GNNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-TTSSHHHHH--HHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CcHhHHHHH--HHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4578999999999999999999999999999999 765432221  111   2378999999999998888876      


Q ss_pred             -CCCEEEEeccCCccc-----------cchhHhHhhhhhhhHHHHHHHHHHhc----------CCcCEEEEecccccccC
Q 019415           79 -GCDFVFHVATPLQHI-----------DGYLYKNVVEACVGAAKKIASFCVKS----------GTVKRLIYTASVLCASP  136 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----------~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~~I~~Ss~~~~~~  136 (341)
                       ++|+|||+||.....           ..+.++..+++|+.++.++++++...          + ..+||++||..++.+
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~  163 (265)
T 2o23_A           85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFEG  163 (265)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHC
T ss_pred             CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcCC
Confidence             799999999976432           23446788999999999999988764          4 579999999876543


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCC
Q 019415          137 LKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTP  212 (341)
Q Consensus       137 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~  212 (341)
                      ..                            +...|+.+|...+.+.+.++ +   .|+++.+++||.+.++.....    
T Consensus       164 ~~----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----  211 (265)
T 2o23_A          164 QV----------------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL----  211 (265)
T ss_dssp             CT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------
T ss_pred             CC----------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc----
Confidence            21                            24789999999998888876 3   489999999999987743221    


Q ss_pred             chhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          213 VSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                        .......+....+.            ...+++++|+|+++..++..+...| ++++.++
T Consensus       212 --~~~~~~~~~~~~~~------------~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG  258 (265)
T 2o23_A          212 --PEKVCNFLASQVPF------------PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGA  258 (265)
T ss_dssp             -------CHHHHTCSS------------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             --CHHHHHHHHHcCCC------------cCCCCCHHHHHHHHHHHhhcCccCceEEEECCC
Confidence              00111111111000            1347889999999999997666666 6777665

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.92  E-value=1.9e-23  Score=181.43  Aligned_cols=228  Identities=15%  Similarity=0.151  Sum_probs=158.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +....... +.+...  ...++.++.+|++|++++.++++     
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVAR-QVDRLHEAARSLKEK--FGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 75432211 111111  02368899999999998888776     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||.....     ..+.++..+++|+.++.++++++.    +.+ ..++|++||..++.+..         
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  152 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLW---------  152 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCC---------
Confidence              799999999975432     244567889999999999988874    345 68999999987544221         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         +...|+.||...+.+.+.++ +   .|++++++|||.++++.....      ...+.....
T Consensus       153 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~~  207 (263)
T 3ai3_A          153 -------------------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKT------AKELTKDNG  207 (263)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH------HHHHTTTTT
T ss_pred             -------------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhh------hHhhhcccC
Confidence                               24789999999999999887 4   589999999999998742110      000000000


Q ss_pred             cCccccccccchhhc-cCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEI-LGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~-~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .......  ...... .....+++++|+|+++..++..+.  ..| +|++.++
T Consensus       208 ~~~~~~~--~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          208 GDWKGYL--QSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGG  258 (263)
T ss_dssp             CCHHHHH--HHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             CcHHHHH--HHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            0000000  000000 014568999999999999987543  345 7888765

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.92  E-value=1.1e-23  Score=183.15  Aligned_cols=217  Identities=13%  Similarity=0.096  Sum_probs=144.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHh------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAI------   77 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   77 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +....... ..+..   ....+.++.+|+++++++.+++      
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR-NEYELNECLSKWQK---KGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 75432221 11222   1246889999999998888777      


Q ss_pred             --cCCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           78 --QGCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        78 --~~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        .++|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .+++|++||..++.+..        
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--------  159 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS--------  159 (266)
T ss_dssp             HTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-----------------
T ss_pred             hCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCC--------
Confidence              4689999999975432     24456788999999999999988    4555 78999999987544221        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.+|...|.+++.++ +   .|++++++||+.++++.....  .   ...+...+
T Consensus       160 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~---~~~~~~~~  214 (266)
T 1xq1_A          160 --------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV--Y---DDEFKKVV  214 (266)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------
T ss_pred             --------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh--c---CHHHHHHH
Confidence                                24689999999999998886 3   389999999999999854322  0   01111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...       ..      ...+++++|+|+++..++...  ...| ++++.++
T Consensus       215 ~~~-------~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          215 ISR-------KP------LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             ----------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             Hhc-------CC------CCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence            110       00      234788999999999988643  2345 7788765

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.92  E-value=6.4e-23  Score=177.31  Aligned_cols=219  Identities=17%  Similarity=0.164  Sum_probs=157.4

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++|+||||||+|+||+++++.|++.|++|++++| +... ..  ....+.    . .++.+|++|+++++++++  
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~-~~--~~~~~~----~-~~~~~D~~~~~~~~~~~~~~   71 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL-RPEG-KE--VAEAIG----G-AFFQVDLEDERERVRFVEEA   71 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STTH-HH--HHHHHT----C-EEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChhH-HH--HHHHhh----C-CEEEeeCCCHHHHHHHHHHH
Confidence            66556789999999999999999999999999999999 7654 21  112221    3 789999999988887765  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||..+..+..      
T Consensus        72 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------  144 (256)
T 2d1y_A           72 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQ------  144 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCC------
Confidence                 6899999999765321     345678999999999999888753    34 68999999987554321      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.||...+.+.+.++ +   .|+++.+++||.+.++..          ..+..
T Consensus       145 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~----------~~~~~  192 (256)
T 2d1y_A          145 ----------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV----------LEAIA  192 (256)
T ss_dssp             ----------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH----------HHHHC
T ss_pred             ----------------------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh----------hhccc
Confidence                                  24789999999999998886 3   489999999999976521          11100


Q ss_pred             hHh-cCc--cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          221 QLT-NNE--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       221 ~~~-~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ... ...  ..+....      ....+++++|+|++++.++...  ...| .+++.++.
T Consensus       193 ~~~~~~~~~~~~~~~~------~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          193 LSPDPERTRRDWEDLH------ALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGM  245 (256)
T ss_dssp             --------CHHHHTTS------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccCCHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence            000 000  0011111      1456899999999999998754  2356 78887763

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.91  E-value=3.3e-23  Score=181.12  Aligned_cols=228  Identities=16%  Similarity=0.082  Sum_probs=160.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |...++++||||||+|+||+++++.|++.|++|++++| +....... +.+..   ....+.++.+|++|++++.++++ 
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~~~~~v~~~~~~   92 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCAR-GEEGLRTTLKELRE---AGVEADGRTCDVRSVPEIEALVAA   92 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHH
Confidence            43344678999999999999999999999999999999 75432221 22222   12468899999999998887776 


Q ss_pred             ------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc------CCcCEEEEecccccccCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS------GTVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                            ++|++||+||......     .+.++..+++|+.++.++++++...      + ..+||++||.....+..   
T Consensus        93 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---  168 (277)
T 2rhc_B           93 VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVV---  168 (277)
T ss_dssp             HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCT---
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCC---
Confidence                  6899999999754321     3456789999999999999997654      4 57999999987554321   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                               ....|+.+|...+.+.+.++ +   .|+++.+++||.+.++....      ....
T Consensus       169 -------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~~~  217 (277)
T 2rhc_B          169 -------------------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS------VREH  217 (277)
T ss_dssp             -------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH------HHHH
T ss_pred             -------------------------CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh------hhhh
Confidence                                     24789999999999998876 3   48999999999998763110      0000


Q ss_pred             hHhhHh---cC-ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          218 GLCQLT---NN-EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       218 ~~~~~~---~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      +.....   .. ...+....      ....+++++|+|++++.++..+  ...| ++++.++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          218 YSDIWEVSTEEAFDRITARV------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHHHHTCCHHHHHHHHHHHS------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             cccccccchHHHHHHHHhcC------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            000000   00 00000000      1456899999999999998753  2355 77887653

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.91  E-value=4.3e-23  Score=181.77  Aligned_cols=226  Identities=12%  Similarity=0.027  Sum_probs=159.7

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---CC
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---GC   80 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   80 (341)
                      .++++||||||+|+||+++++.|+++|++|++++| +...   .+....  .....++++.+|++|++++.++++   ++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r-~~~~---~~~~~~--~~~~~~~~~~~Dl~d~~~v~~~~~~~~~i   87 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVR-DTRK---GEAAAR--TMAGQVEVRELDLQDLSSVRRFADGVSGA   87 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHT--TSSSEEEEEECCTTCHHHHHHHHHTCCCE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHH--HhcCCeeEEEcCCCCHHHHHHHHHhcCCC
Confidence            35689999999999999999999999999999999 6543   222221  123579999999999999999987   57


Q ss_pred             CEEEEeccCCcccc---chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID---GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPP  157 (341)
Q Consensus        81 d~Vi~~a~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~  157 (341)
                      |++||+||......   .+.++..+++|+.++.++++++.... .+++|++||...+.+....     .....+..    
T Consensus        88 D~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~-----~~~~~~~~----  157 (291)
T 3rd5_A           88 DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINL-----EDLNWRSR----  157 (291)
T ss_dssp             EEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCS-----SCTTCSSS----
T ss_pred             CEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCc-----cccccccc----
Confidence            99999999865332   44567899999999999999999987 7899999998865543221     11111111    


Q ss_pred             CCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CC--ceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccccc
Q 019415          158 DHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SG--LEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQT  231 (341)
Q Consensus       158 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~--~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (341)
                            ...+...|+.||...+.+.+.++ +   .|  +++..++||.|..+.....      ...+...+...      
T Consensus       158 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~------~~~~~~~~~~~------  219 (291)
T 3rd5_A          158 ------RYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS------GRKLGDALMSA------  219 (291)
T ss_dssp             ------CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc------chHHHHHHHHH------
Confidence                  12456899999999999998886 3   35  9999999999977643322      11111111100      


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceE-EEe
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRF-FCT  270 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~-n~~  270 (341)
                       ..      .+-....+|+|++++.++..+...|.| ++.
T Consensus       220 -~~------~~~~~~~~~~A~~~~~l~~~~~~~G~~~~vd  252 (291)
T 3rd5_A          220 -AT------RVVATDADFGARQTLYAASQDLPGDSFVGPR  252 (291)
T ss_dssp             ------------CHHHHHHHHHHHHHHHSCCCTTCEEEET
T ss_pred             -HH------HHHhCCHHHHHHHHHHHHcCCCCCCceeCCc
Confidence             00      333446999999999999876667744 453

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.91  E-value=3.4e-23  Score=178.32  Aligned_cols=215  Identities=16%  Similarity=0.113  Sum_probs=152.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---CCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---GCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d   81 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +........  ..+   ...+.++.+|+++.+.+.++++   ++|
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id   86 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGS-NEEKLKSLG--NAL---KDNYTIEVCNLANKEECSNLISKTSNLD   86 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHH---CSSEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHH--HHh---ccCccEEEcCCCCHHHHHHHHHhcCCCC
Confidence            5689999999999999999999999999999999 654322221  111   1378899999999999998887   689


Q ss_pred             EEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        82 ~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                      ++||+||.....     ..+.++..+++|+.++.++++++..    .+ ..+||++||..++.+..              
T Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------------  151 (249)
T 3f9i_A           87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNP--------------  151 (249)
T ss_dssp             EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCS--------------
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCC--------------
Confidence            999999976532     1445678999999999999888743    34 57999999987555322              


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV  228 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (341)
                                    ....|+.||...+.+.+.++ +   .|+++.+++||.|.++.....      .......+...   
T Consensus       152 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~---  208 (249)
T 3f9i_A          152 --------------GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL------NEKQREAIVQK---  208 (249)
T ss_dssp             --------------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C------CHHHHHHHHHH---
T ss_pred             --------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc------CHHHHHHHHhc---
Confidence                          24789999999999888876 3   489999999999988754332      11111111110   


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                          ..      ...+.+++|+|+++..++....  ..| .+++.++.
T Consensus       209 ----~~------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          209 ----IP------LGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             ----CT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             ----CC------CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence                11      5668899999999999997543  345 78887654

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.91  E-value=7.9e-23  Score=178.91  Aligned_cols=231  Identities=12%  Similarity=0.071  Sum_probs=162.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC---------chhhhhHh-hhCCCCCCceEEEecCCCChHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE---------DKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +..         .....+.. ..+......+.++.+|++|++++.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDL-CDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC-CSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEec-ccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4679999999999999999999999999999998 622         11222211 111112347999999999999888


Q ss_pred             HHhc-------CCCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCC
Q 019415           75 NAIQ-------GCDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        75 ~~~~-------~~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                      ++++       ++|++||+||...... .+.++..+++|+.++.++++++...    +...++|++||...+.+...   
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---  167 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS---  167 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC---
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc---
Confidence            8876       7999999999865543 5567799999999999999987442    21368999999886553211   


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                           .......|+.||...+.+.+.++ +   .|+++..++||.|.++.....     .....
T Consensus       168 ---------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~  221 (278)
T 3sx2_A          168 ---------------------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE-----FTREW  221 (278)
T ss_dssp             ---------------------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH-----HHHHH
T ss_pred             ---------------------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh-----hHHHH
Confidence                                 01346789999999999998887 3   489999999999988754321     11111


Q ss_pred             H-hhHhcCc--cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          219 L-CQLTNNE--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       219 ~-~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      . .......  ..+...      . ...+++++|+|+++++++...  ...| ++++.++
T Consensus       222 ~~~~~~~~~~~~~~~~~------~-p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          222 LAKMAAATDTPGAMGNA------M-PVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             HHHHHHHCC--CTTSCS------S-SCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             Hhhccchhhhhhhhhhh------c-CcCcCCHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence            1 1111111  111111      1 356889999999999998653  3456 7777665

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.91  E-value=3.5e-23  Score=181.21  Aligned_cols=221  Identities=14%  Similarity=0.098  Sum_probs=147.6

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .+++++|||||+|+||+++++.|++.|++|++++| +... ........+......+.++++|++|++++.++++     
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGI-GDAE-GVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CCHH-HHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeC-CCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999986 4322 1111111111223579999999999988887776     


Q ss_pred             --CCCEEEEeccCCc--cc-----cchhHhHhhhhhhhHHHHHHHHHHhcC------CcCEEEEecccccccCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQ--HI-----DGYLYKNVVEACVGAAKKIASFCVKSG------TVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 --~~d~Vi~~a~~~~--~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                        ++|++||+||...  ..     ..+.++..+++|+.++.++++++...-      ...++|++||..+..+..     
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-----  179 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP-----  179 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC------------
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC-----
Confidence              7899999999732  11     245567899999999999988875441      025899999987655322     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                             ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....      .....
T Consensus       180 -----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------~~~~~  230 (280)
T 4da9_A          180 -----------------------ERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV------SGKYD  230 (280)
T ss_dssp             -----------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------
T ss_pred             -----------------------CccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc------chhHH
Confidence                                   24789999999999998887 4   589999999999988743322      11111


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .......      ..      ...+..++|+|+++.+++....  ..| ++++.++
T Consensus       231 ~~~~~~~------~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          231 GLIESGL------VP------MRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             -----------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred             HHHhhcC------CC------cCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            1111100      00      4457889999999999997544  456 7777665

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.91  E-value=4.3e-23  Score=181.58  Aligned_cols=220  Identities=18%  Similarity=0.128  Sum_probs=160.7

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCC-CceEEEecCCCChHHHHHHhc---
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAE-TRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ..++|+||||||+|+||+++++.|++.|++|++++| +.........  .+.... ..+.++.+|++|+++++++++   
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~--~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  114 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAAR-SPRELSSVTA--ELGELGAGNVIGVRLDVSDPGSCADAARTVV  114 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SGGGGHHHHH--HHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--HHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence            335689999999999999999999999999999999 7654332221  121222 478999999999988777765   


Q ss_pred             ----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccc-cCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCA-SPLKEDGSAG  144 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~-~~~~~~~~~~  144 (341)
                          ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||.... .+.       
T Consensus       115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~-------  186 (293)
T 3rih_A          115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGY-------  186 (293)
T ss_dssp             HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBC-------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCC-------
Confidence                6899999999765422     4556789999999999999988    3555 6899999998743 321       


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                           .....|+.||...+.+.+.++ +   .|+++.+++||.|+++.....      ...+..
T Consensus       187 ---------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~------~~~~~~  239 (293)
T 3rih_A          187 ---------------------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM------GEEYIS  239 (293)
T ss_dssp             ---------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT------CHHHHH
T ss_pred             ---------------------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc------cHHHHH
Confidence                                 125789999999999999877 3   489999999999988743221      112222


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      .+....+             ...+...+|+|+++.+++...  ...| ++++.++.
T Consensus       240 ~~~~~~p-------------~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~  282 (293)
T 3rih_A          240 GMARSIP-------------MGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQ  282 (293)
T ss_dssp             HHHTTST-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhcCC-------------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            2222110             334667999999999998643  3456 77786653

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.91  E-value=5.9e-23  Score=176.62  Aligned_cols=215  Identities=14%  Similarity=0.119  Sum_probs=159.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +..........  +   .....++++|++|+++++++++      
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~~--~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTAT-SESGAQAISDY--L---GDNGKGMALNVTNPESIEAVLKAITDEF   81 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHH--H---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHH--h---cccceEEEEeCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 65432222111  1   1257889999999998888776      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||.....+..          
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----------  150 (248)
T 3op4_A           82 GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNA----------  150 (248)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCC----------
Confidence             7999999999765432     455678999999999999998754    44 57999999987665432          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        +...|+.||...+.+.+.++ +   .|+++..++||.+..+.....      ..........
T Consensus       151 ------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~~~~~~~~  206 (248)
T 3op4_A          151 ------------------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL------NDEQRTATLA  206 (248)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS------CHHHHHHHHH
T ss_pred             ------------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc------CHHHHHHHHh
Confidence                              25789999999988888876 3   489999999999987754322      1111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ..       .      ...+.+++|+|+++.+++....  ..| ++++.++.
T Consensus       207 ~~-------p------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          207 QV-------P------AGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             TC-------T------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cC-------C------CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence            10       1      4557889999999999886432  346 67776653

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.91  E-value=5.2e-23  Score=178.72  Aligned_cols=223  Identities=17%  Similarity=0.201  Sum_probs=157.4

Q ss_pred             CCCC-CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHK-SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~-~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |+.. ++++||||||+|+||+++++.|++.|++|++++| +...  ..+.+.. .......+.++.+|++|++++.++++
T Consensus         1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   77 (264)
T 3i4f_A            1 MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYH-SDTT--AMETMKETYKDVEERLQFVQADVTKKEDLHKIVE   77 (264)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcC-CChH--HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            4433 4578999999999999999999999999999888 5432  1222211 11223479999999999998888876


Q ss_pred             -------CCCEEEEeccCC--ccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCC
Q 019415           79 -------GCDFVFHVATPL--QHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        79 -------~~d~Vi~~a~~~--~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~  140 (341)
                             ++|++||+||..  ...     ..+.++..+++|+.++.++++++    ++.+ ..++|++||..+.... . 
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~-~-  154 (264)
T 3i4f_A           78 EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAP-G-  154 (264)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCC-C-
T ss_pred             HHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccC-C-
Confidence                   789999999942  211     14456788999999999999998    5555 6899999998533111 1 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                              ..+...|+.+|...+.+.+.++ +   .|+++.+++||.|+++.....      ..
T Consensus       155 ------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~  204 (264)
T 3i4f_A          155 ------------------------WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT------IQ  204 (264)
T ss_dssp             ------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC------HH
T ss_pred             ------------------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc------cH
Confidence                                    0125789999999999998887 4   589999999999998854433      22


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .........       ..      ...+.+++|+|+++..++....  ..| ++++.++
T Consensus       205 ~~~~~~~~~-------~p------~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG  250 (264)
T 3i4f_A          205 EARQLKEHN-------TP------IGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGA  250 (264)
T ss_dssp             HHHHC---------------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCS
T ss_pred             HHHHHHhhc-------CC------CCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCc
Confidence            222211111       00      3457889999999999997542  346 7888765

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.91  E-value=4e-23  Score=179.07  Aligned_cols=221  Identities=13%  Similarity=0.100  Sum_probs=155.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +...  ..+.+ ..+......+.++.+|+++++++.++++     
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r-~~~~--~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR-SKED--EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcC-CChH--HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999988 4322  12111 1111112468899999999998888776     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+||.....     ..+.++..+++|+.++.++++++...    +...+||++||..+..+.          
T Consensus        83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  152 (261)
T 1gee_A           83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW----------  152 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC----------
Confidence              789999999976532     14456788999999999988876543    213699999998754321          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                        .+...|+.+|...+.+.+.++ +   .|++++++||+.++++.....  .  ..+.....+.
T Consensus       153 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~--~~~~~~~~~~  210 (261)
T 1gee_A          153 ------------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK--F--ADPEQRADVE  210 (261)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH--H--HSHHHHHHHH
T ss_pred             ------------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc--c--cChhHHHHHH
Confidence                              125789999999998888776 3   489999999999988742110  0  0011111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ..       ..      ...+++++|+|++++.++...  ...| ++++.++.
T Consensus       211 ~~-------~~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  250 (261)
T 1gee_A          211 SM-------IP------MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_dssp             TT-------CT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hc-------CC------CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCc
Confidence            10       00      345889999999999998643  2345 77787653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.91  E-value=7.9e-23  Score=177.85  Aligned_cols=217  Identities=11%  Similarity=0.068  Sum_probs=157.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|+++.+ +... ........+......+.++.+|++|++++.++++      
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~-r~~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYH-RDAA-GAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CchH-HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999987665 3321 1111122221223578999999999998888776      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH-----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV-----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++.     +.+ ..++|++||..+..+...        
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--------  173 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGNRG--------  173 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCCTT--------
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCCCC--------
Confidence             7999999999765432     45567899999999999999873     344 589999999886664322        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                          ...|+.+|...+.+.+.++ +   .|+++.+++||.|.++.....       ........
T Consensus       174 --------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~~~~~~~~  226 (267)
T 4iiu_A          174 --------------------QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-------ESALKEAM  226 (267)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-------HHHHHHHH
T ss_pred             --------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-------HHHHHHHH
Confidence                                5789999998888887776 3   489999999999988754322       11222221


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...       .      ...+.+++|+|+++.+++...  ...| ++++.++
T Consensus       227 ~~~-------p------~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          227 SMI-------P------MKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HTC-------T------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcC-------C------CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence            111       0      445778999999999998753  2456 7777665

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.91  E-value=4.4e-23  Score=178.73  Aligned_cols=221  Identities=14%  Similarity=0.084  Sum_probs=156.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHh------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAI------   77 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   77 (341)
                      ++|+||||||+|+||+++++.|++.|++|++++| +....... ..+..   ...++.++.+|++|++++.+++      
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSR-NQKELNDCLTQWRS---KGFKVEASVCDLSSRSERQELMNTVANH   83 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 75432221 12222   1247889999999998888777      


Q ss_pred             --cCCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           78 --QGCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        78 --~~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        .++|++||+||.....     ..+.++..+++|+.++.++++++.    +.+ ..++|++||..+..+..        
T Consensus        84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  154 (260)
T 2ae2_A           84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVP--------  154 (260)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCT--------
T ss_pred             cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC--------
Confidence              4699999999975432     144567889999999999998884    445 68999999987544221        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.||...|.+.+.++ +   .|+++.+++||.+.++.....  ...  ......+
T Consensus       155 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~--~~~~~~~  210 (260)
T 2ae2_A          155 --------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMT--IQD--PEQKENL  210 (260)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHH--TTS--HHHHHHH
T ss_pred             --------------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhh--ccC--hhhHHHH
Confidence                                24789999999999999887 4   389999999999977631110  000  0000000


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .    .+....      ....+++++|+|+++..++...  ...| ++++.++
T Consensus       211 ~----~~~~~~------~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          211 N----KLIDRC------ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             H----HHHHTS------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             H----HHHhcC------CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            0    000000      1445889999999999988643  2356 6777765

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.91  E-value=3.9e-23  Score=180.21  Aligned_cols=219  Identities=16%  Similarity=0.113  Sum_probs=159.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||+++++.|++.|++|++++| +.......+.+..   ....+.++.+|++|++++.++.+      
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g  105 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGR-TDGVKEVADEIAD---GGGSAEAVVADLADLEGAANVAEELAATR  105 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STHHHHHHHHHHT---TTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcC-HHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            4679999999999999999999999999999988 6433222222322   23578999999999988777654      


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||..++.+..           
T Consensus       106 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~-----------  173 (273)
T 3uf0_A          106 RVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGR-----------  173 (273)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS-----------
T ss_pred             CCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCC-----------
Confidence            7999999999765422     4556789999999999999887    3445 57999999988654322           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       ....|+.||...+.+.+.++ +   .|+++..++||.|.++.....  .  ........+...
T Consensus       174 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~--~~~~~~~~~~~~  232 (273)
T 3uf0_A          174 -----------------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL--R--ADDERAAEITAR  232 (273)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--H--TSHHHHHHHHHH
T ss_pred             -----------------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc--c--cCHHHHHHHHhc
Confidence                             24789999999999999887 4   589999999999988642211  0  000111111100


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                             ..      ...+.+++|+|+++.+++...  ...| ++++.++.
T Consensus       233 -------~p------~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~  270 (273)
T 3uf0_A          233 -------IP------AGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGW  270 (273)
T ss_dssp             -------ST------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -------CC------CCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence                   00      455788999999999998753  3456 77887653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.91  E-value=3.8e-23  Score=179.65  Aligned_cols=220  Identities=15%  Similarity=0.074  Sum_probs=159.1

Q ss_pred             CCCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            4 KSNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         4 ~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      .++++||||||+  |+||+++++.|+++|++|++++| +.......+.+....   ....++.+|+++++++.++++   
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ-NDKLKGRVEEFAAQL---GSDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES-STTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcC-cHHHHHHHHHHHHhc---CCcEEEEccCCCHHHHHHHHHHHH
Confidence            345789999999  99999999999999999999999 763223333332211   134789999999998888776   


Q ss_pred             ----CCCEEEEeccCCcc----------ccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQH----------IDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                          ++|++||+||....          ...+.++..+++|+.++.++++++...- .-.++|++||..++.+..     
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----  157 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP-----  157 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT-----
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCC-----
Confidence                68999999997642          2234567899999999999999998752 025999999987544321     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                             ....|+.||...+.+.+.++ +   .|+++.+++||.++++.....   .. ...+.
T Consensus       158 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~-~~~~~  210 (265)
T 1qsg_A          158 -----------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI---KD-FRKML  210 (265)
T ss_dssp             -----------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS---TT-HHHHH
T ss_pred             -----------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc---cc-cHHHH
Confidence                                   24689999999999998886 3   389999999999998753321   11 11122


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..+....       .      ...+.+++|+|+++..++....  ..| .|++.++
T Consensus       211 ~~~~~~~-------p------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          211 AHCEAVT-------P------IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             HHHHHHS-------T------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHhcC-------C------CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence            2111110       0      3347889999999999986532  345 7788765

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.91  E-value=6.6e-23  Score=177.13  Aligned_cols=221  Identities=14%  Similarity=0.071  Sum_probs=157.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +.. ....+.+..   ....+.++.+|++|++++.++++      
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~-~~~~~~l~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGF-GDP-APALAEIAR---HGVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECS-SCC-HHHHHHHHT---TSCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-Cch-HHHHHHHHh---cCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            3579999999999999999999999999999999 765 222333322   12468899999999999988887      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||.....     ..+.++..+++|+.++.++.+++    ++.+ ..++|++||..++.+..          
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  146 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGST----------  146 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCC----------
Confidence             799999999975432     14456789999999777766655    5555 68999999987544321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+.+.++ +   .|+++++++||.++++....      ..... .....
T Consensus       147 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------~~~~~-~~~~~  201 (255)
T 2q2v_A          147 ------------------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK------QIDDR-AANGG  201 (255)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH------HHHHH-HHHTC
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh------hcccc-ccccc
Confidence                              24789999999999998887 4   48999999999998863211      00000 00000


Q ss_pred             Cc----ccc-ccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NE----YVY-QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~----~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..    ..+ ....      ....+++++|+|+++..++....  ..| .|++.++
T Consensus       202 ~~~~~~~~~~~~~~------p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          202 DPLQAQHDLLAEKQ------PSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             CHHHHHHHHHTTTC------TTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             chHHHHHHHHhccC------CCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            00    000 1101      14568999999999999886532  345 7788765

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.91  E-value=1.4e-23  Score=180.19  Aligned_cols=215  Identities=16%  Similarity=0.096  Sum_probs=156.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +|+||||||+|+||+++++.|+++|++|+++ .| +....... ..+..   ....+.++.+|++++++++++++     
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYAR-SAKAAEEVSKQIEA---YGGQAITFGGDVSKEADVEAMMKTAIDA   76 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHH---HTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHh---cCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999985 67 54322211 11211   12468899999999998888876     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+||.....     ..+.++..+++|+.++.++++++...    + ..+||++||..++++..         
T Consensus        77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~---------  146 (244)
T 1edo_A           77 WGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNI---------  146 (244)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT---------
T ss_pred             cCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCCC---------
Confidence              689999999976542     13456788999999999998888653    4 68999999987665322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         +...|+.+|...+.+.+.++ +   .|++++++||+.++++.....      ...+.....
T Consensus       147 -------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~~  201 (244)
T 1edo_A          147 -------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL------GEDMEKKIL  201 (244)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT------CHHHHHHHH
T ss_pred             -------------------CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc------ChHHHHHHh
Confidence                               14789999999999888876 3   489999999999988743221      111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC---CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g-~~n~~~~  272 (341)
                      ...       .      ...+++++|+|+++..++..+.   ..| .|++.++
T Consensus       202 ~~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          202 GTI-------P------LGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             TSC-------T------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             hcC-------C------CCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence            110       0      3458899999999999984332   245 7788765

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.91  E-value=7.2e-23  Score=177.20  Aligned_cols=211  Identities=14%  Similarity=0.073  Sum_probs=153.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +....  .+.+...     ++.++.+|+++++++.++++      
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~--~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYR-TEHAS--VTELRQA-----GAVALYGDFSCETGIMAFIDLLKTQT   97 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEES-SCCHH--HHHHHHH-----TCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-ChHHH--HHHHHhc-----CCeEEECCCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999 76532  2222221     47899999999988887775      


Q ss_pred             -CCCEEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       ++|++||+||......    .+.++..+++|+.++.++++++..    .+ ..++|++||..+..+..           
T Consensus        98 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----------  165 (260)
T 3gem_A           98 SSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGSS-----------  165 (260)
T ss_dssp             SCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCCS-----------
T ss_pred             CCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCC-----------
Confidence             6899999999765432    444568999999999999888744    34 57999999988655322           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                       ....|+.||...+.+.+.++ +.  ++++..++||.+..+.....        ..........
T Consensus       166 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~--------~~~~~~~~~~  220 (260)
T 3gem_A          166 -----------------KHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA--------AYRANALAKS  220 (260)
T ss_dssp             -----------------SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-----------------------C
T ss_pred             -----------------CcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH--------HHHHHHHhcC
Confidence                             25789999999999999887 43  69999999999977642211        1111111110


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEeccc
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVF  273 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~  273 (341)
                          .         ...+..++|+|++++++++.+...| ++++.++.
T Consensus       221 ----p---------~~r~~~~edva~~v~~L~~~~~itG~~i~vdGG~  255 (260)
T 3gem_A          221 ----A---------LGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNGGR  255 (260)
T ss_dssp             ----C---------SCCCCCTHHHHHHHHHHHHCSSCCSCEEEESTTT
T ss_pred             ----C---------CCCCCCHHHHHHHHHHHhhCCCCCCCEEEECCCc
Confidence                0         2335678999999999997666677 77887653

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.91  E-value=6.4e-23  Score=177.42  Aligned_cols=220  Identities=16%  Similarity=0.118  Sum_probs=158.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|+||+++++.|+++|++|+++ .| +........  ..+......+.++.+|++|++++.++++     
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR-SKKAALETA--EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHH--HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHH--HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35799999999999999999999999999986 66 543322211  1122223579999999999988887775     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++.    +.+ ..++|++||..++.+..         
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------  149 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLE---------  149 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCT---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCC---------
Confidence              5799999999654322     45567889999999999988874    444 57999999987544321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.||...+.+.+.++ +   .|+++..++||.+..+.....   .. ...+.....
T Consensus       150 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~-~~~~~~~~~  206 (258)
T 3oid_A          150 -------------------NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF---PN-REDLLEDAR  206 (258)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC---TT-HHHHHHHHH
T ss_pred             -------------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc---cc-CHHHHHHHH
Confidence                               25789999999999999887 4   389999999999987743322   00 111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ..       ..      ...+.+++|+|+++++++....  ..| ++++.++.
T Consensus       207 ~~-------~p------~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~  246 (258)
T 3oid_A          207 QN-------TP------AGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGR  246 (258)
T ss_dssp             HH-------CT------TSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTG
T ss_pred             hc-------CC------CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            10       00      4568889999999999997643  456 77887653

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.91  E-value=3.5e-23  Score=179.82  Aligned_cols=218  Identities=14%  Similarity=0.113  Sum_probs=153.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++++||||||+|+||+++++.|+++|++|++++| +.......  ....   ...+.++.+|++|++++.++++  
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~~~~--~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGT-REDKLKEI--AADL---GKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHH---CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHh---CCceEEEEeecCCHHHHHHHHHHH
Confidence            33445689999999999999999999999999999999 65432221  1111   2478999999999998888775  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||+||......     .+.++..+++|+.++.++.+++    ++.+ ..++|++||..++.+..      
T Consensus        96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~------  168 (266)
T 3grp_A           96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNP------  168 (266)
T ss_dssp             HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCC------
Confidence                 7999999999765321     4556788999999977666655    4455 57999999987655322      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.||...+.+.+.++ +   .|+++.+++||.|.++.....      ......
T Consensus       169 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~------~~~~~~  220 (266)
T 3grp_A          169 ----------------------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL------NEKQKE  220 (266)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC------CHHHHH
T ss_pred             ----------------------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc------CHHHHH
Confidence                                  25789999999998888876 3   489999999999987632221      111222


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .+....       .      ...+.+++|+|+++.+++....  ..| ++++.++
T Consensus       221 ~~~~~~-------p------~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          221 AIMAMI-------P------MKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             HHHTTC-------T------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhcC-------C------CCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            221111       1      4557889999999999986532  356 7777665

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.91  E-value=1.7e-22  Score=174.64  Aligned_cols=221  Identities=11%  Similarity=0.037  Sum_probs=159.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +........  ..+......+.++.+|++|++++.++++      
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGR-TKEKLEEAK--LEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999999999 764422222  1222334579999999999988888775      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH-----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC-----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~-----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++     ++.+ ..++|++||.....+..         
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  151 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-KGNIINMVATYAWDAGP---------  151 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEECCGGGGSCCT---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-CcEEEEECchhhccCCC---------
Confidence             6899999999654321     4556789999999999999988     3333 57999999987554321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         ....|+.||...+.+.+.++ +    .|+++..++||.|.++.....  .. ....+...+
T Consensus       152 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~--~~-~~~~~~~~~  209 (257)
T 3imf_A          152 -------------------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADK--LW-ISEEMAKRT  209 (257)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC----------CCSHHH
T ss_pred             -------------------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhh--cc-cCHHHHHHH
Confidence                               24789999999999888876 3    389999999999988754322  00 001111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ...       ..      ...+..++|+|+++..++....  ..| ++++.++.
T Consensus       210 ~~~-------~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (257)
T 3imf_A          210 IQS-------VP------LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQ  250 (257)
T ss_dssp             HTT-------ST------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             Hhc-------CC------CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCc
Confidence            111       00      3457889999999999987533  356 67776653

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.91  E-value=5.6e-23  Score=178.39  Aligned_cols=217  Identities=16%  Similarity=0.113  Sum_probs=156.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhh-hCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLK-SLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+|+||+++++.|++.|++|++++| +...   .+.+. .+.   .++.++.+|++|++++.++++     
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~---~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADL-DVMA---AQAVVAGLE---NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHTCT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999999 6532   22222 221   267889999999998888876     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+||......     .+.++..+++|+.++.++++++...    +...++|++||..+..+.          
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  153 (263)
T 3ak4_A           84 LGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA----------  153 (263)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC----------
Confidence              7999999999754321     3456789999999999998887653    214799999998754321          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch---h-----
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS---V-----  215 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~---~-----  215 (341)
                                        .....|+.||...+.+.+.++ +   .|++++++|||.++++.....  . ..   .     
T Consensus       154 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~-~~~~~~~~~~~  212 (263)
T 3ak4_A          154 ------------------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQERE--I-IWEAELRGMTP  212 (263)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHH--H-HHHHHHHTSCH
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhh--c-cccccccccCc
Confidence                              124789999999999998876 3   489999999999987631110  0 00   0     


Q ss_pred             hhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          216 IGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ......+       ....      ....+++++|+|+++..++...  ...| +|++.++
T Consensus       213 ~~~~~~~-------~~~~------p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          213 EAVRAEY-------VSLT------PLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             HHHHHHH-------HHTC------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHH-------HhcC------CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence            0000000       0000      1456899999999999998753  2356 7888765

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.91  E-value=5.5e-23  Score=180.56  Aligned_cols=217  Identities=15%  Similarity=0.088  Sum_probs=155.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|+++.| +.......  ...+......+.++.+|++|+++++++++      
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISR-TQKSCDSV--VDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES-SHHHHHHH--HHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcC-CHHHHHHH--HHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            3578999999999999999999999999999888 65432221  11111223478899999999998888774      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++++..          
T Consensus       120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~----------  188 (285)
T 2c07_A          120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNV----------  188 (285)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT----------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCC----------
Confidence             689999999976432     244567889999999888877765    445 68999999997665322          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...|.+++.++ +   .|++++++|||.+.++.....      ...+......
T Consensus       189 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~~~  244 (285)
T 2c07_A          189 ------------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI------SEQIKKNIIS  244 (285)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C------CHHHHHHHHT
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc------CHHHHHHHHh
Confidence                              14789999999999888876 3   489999999999988743321      1122221111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ..      .       ...+++++|+|+++..++....  ..| .+++.++
T Consensus       245 ~~------~-------~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG  282 (285)
T 2c07_A          245 NI------P-------AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  282 (285)
T ss_dssp             TC------T-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hC------C-------CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence            10      0       3348899999999999987532  345 7777665

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.91  E-value=9.6e-23  Score=175.26  Aligned_cols=217  Identities=16%  Similarity=0.108  Sum_probs=160.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||+|+||+++++.|+++|++|++++| +............  .....+.++.+|++|++++.++++      
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTAT-SQASAEKFENSMK--EKGFKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHH--hcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 7654333222111  123478999999999998888775      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||.....+..          
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  149 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNP----------  149 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT----------
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCC----------
Confidence             4799999999865421     455678999999999999888654    34 46999999987655322          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.||...+.+.+.++ +   .|+++.+++||.+..+.....      ..........
T Consensus       150 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~~  205 (247)
T 3lyl_A          150 ------------------GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL------TDEQKSFIAT  205 (247)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS------CHHHHHHHHT
T ss_pred             ------------------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc------cHHHHHHHhh
Confidence                              25789999998888888876 3   489999999999988754332      1122221111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .       ..      ...+.+++|+|+++..++....  ..| ++++.++
T Consensus       206 ~-------~~------~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  243 (247)
T 3lyl_A          206 K-------IP------SGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG  243 (247)
T ss_dssp             T-------ST------TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-------CC------CCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence            1       11      5568899999999999986532  345 7888765

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.91  E-value=6.7e-23  Score=179.46  Aligned_cols=218  Identities=14%  Similarity=0.084  Sum_probs=157.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-----   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----   79 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +............  .....+.++.+|++|++++.++++.     
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYN-SHPADEKAEHLQK--TYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEES-SSCCHHHHHHHHH--HHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHH--hcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4579999999999999999999999999999999 7655333322211  1123688999999999988887753     


Q ss_pred             --CCEEEEeccCCcc------cc-chhHhHhhhhhhhH----HHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           80 --CDFVFHVATPLQH------ID-GYLYKNVVEACVGA----AKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        80 --~d~Vi~~a~~~~~------~~-~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        +|+|||+||....      .. .+.++..+++|+.+    +.++++.+++.+ .++||++||..+..+..        
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--------  180 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNI--------  180 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC----------
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCC--------
Confidence              8999999997543      11 34456889999999    567777777776 78999999987443210        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                        ..+...|+.+|...|.+++.++ +   .+ ++.+++||.+.++.....      .......+
T Consensus       181 ------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~------~~~~~~~~  235 (279)
T 3ctm_A          181 ------------------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA------SKDMKAKW  235 (279)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC------CHHHHHHH
T ss_pred             ------------------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc------ChHHHHHH
Confidence                              1235789999999999999887 4   37 999999999987753221      11111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...       ..      ...+++++|+|+++..++...  ...| ++++.++
T Consensus       236 ~~~-------~p------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          236 WQL-------TP------LGREGLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             HHH-------ST------TCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHh-------CC------ccCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            100       00      345889999999999998753  2455 7788765

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.91  E-value=4e-23  Score=179.05  Aligned_cols=218  Identities=16%  Similarity=0.116  Sum_probs=157.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+|+||+++++.|++.|++|++++| +....... ..+..   ....+.++.+|+++++++.++++     
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSR-KQENVDRTVATLQG---EGLSVTGTVCHVGKAEDRERLVAMAVNL   88 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 75432211 12222   12468899999999988887775     


Q ss_pred             --CCCEEEEeccCCcc------ccchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH------IDGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        ++|++||+||....      ...+.++..+++|+.++.++++++.    +.+ ..++|++||..++.+.         
T Consensus        89 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------  158 (260)
T 2zat_A           89 HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPF---------  158 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC---------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCC---------
Confidence              79999999997431      1144567889999999999888864    445 6899999998754422         


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchh-hhhHhh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSV-IGGLCQ  221 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~-~~~~~~  221 (341)
                                         .+...|+.+|...+.+.+.++ +   .|+++.+++||.+.++.....     +. ......
T Consensus       159 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~~~~~~~~  214 (260)
T 2zat_A          159 -------------------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVL-----WMDKARKEY  214 (260)
T ss_dssp             -------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHH-----HSSHHHHHH
T ss_pred             -------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhc-----ccChHHHHH
Confidence                               125789999999999999886 3   489999999999987632110     00 000000


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                             +....      ....+.+++|+|+++..++....  ..| ++++.++.
T Consensus       215 -------~~~~~------~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  256 (260)
T 2zat_A          215 -------MKESL------RIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGT  256 (260)
T ss_dssp             -------HHHHH------TCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             -------HHhcC------CCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence                   00000      14568999999999999987542  345 78887753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.91  E-value=2.1e-22  Score=173.49  Aligned_cols=216  Identities=14%  Similarity=0.061  Sum_probs=147.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||+|+||+++++.|+++|++|++++| +...          ..  .++.++.+|++|++++.++++      
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~----------~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQ-AFTQ----------EQ--YPFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CCCS----------SC--CSSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-chhh----------hc--CCceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 6542          11  137889999999998888876      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||.....     ..+.++..+++|+.++.++++++    ++.+ ..++|++||..+..+.           
T Consensus        73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----------  140 (250)
T 2fwm_X           73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPR-----------  140 (250)
T ss_dssp             SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC-----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC-----------
Confidence             689999999975432     14556789999999999999888    4455 6899999998754422           


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh-hHh
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC-QLT  223 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~-~~~  223 (341)
                                       .+...|+.+|...+.+.+.++ +   .|++++++|||.++++.....  ..  ...... .+.
T Consensus       141 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~--~~~~~~~~~~  199 (250)
T 2fwm_X          141 -----------------IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTL--WV--SDDAEEQRIR  199 (250)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccc--cc--ChhHHHHHHh
Confidence                             124789999999999999886 3   489999999999998753321  00  000000 000


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .....+.....      ...+.+.+|+|+++..++...  ...| .+++.++
T Consensus       200 ~~~~~~~~~~p------~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          200 GFGEQFKLGIP------LGKIARPQEIANTILFLASDLASHITLQDIVVDGG  245 (250)
T ss_dssp             ----------------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhhcccccCC------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            00000000000      234788999999999998753  2456 6677655

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.91  E-value=1e-22  Score=175.84  Aligned_cols=226  Identities=16%  Similarity=0.072  Sum_probs=161.6

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|+||+++++.|+++|++|++++| +.........  .+   ...+.++.+|++|++++.++++  
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~Dv~~~~~v~~~~~~~   76 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGR-NESNIARIRE--EF---GPRVHALRSDIADLNEIAVLGAAA   76 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HH---GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHH--Hh---CCcceEEEccCCCHHHHHHHHHHH
Confidence            44456789999999999999999999999999999999 7543222211  11   2378999999999988876654  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                           ++|++||+||......     .+.++..+++|+.++.++++++...- .-.++|++||.....+..         
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  147 (255)
T 4eso_A           77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP---------  147 (255)
T ss_dssp             HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT---------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC---------
Confidence                 6899999999765422     45567889999999999999997642 125899999988654322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.||...+.+.+.++ +   .|+++..++||.+..+..............+.....
T Consensus       148 -------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  208 (255)
T 4eso_A          148 -------------------GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGD  208 (255)
T ss_dssp             -------------------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHH
T ss_pred             -------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHh
Confidence                               25789999999999998887 4   389999999999988754321000001111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcC-CCCCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK-PSMSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~-~~~~g-~~n~~~~~  273 (341)
                      ..       ..      ...+.+++|+|+++++++.. ....| ++++.++.
T Consensus       209 ~~-------~p------~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~  247 (255)
T 4eso_A          209 NI-------TP------MKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGL  247 (255)
T ss_dssp             HH-------ST------TSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTT
T ss_pred             cc-------CC------CCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCc
Confidence            10       01      44577899999999998864 22456 77887653

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.91  E-value=1.5e-22  Score=173.95  Aligned_cols=217  Identities=15%  Similarity=0.122  Sum_probs=154.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+|+||+++++.|++.|++|++++| +...  +.+.+ ..+......+.++.+|++|++++.++++     
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYA-GNEQ--KANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999888 4322  22111 1111112468899999999998888776     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||.....     ..+.++..+++|+.++.++++++.    +.+ ..++|++||....++..         
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  149 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNP---------  149 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCT---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCC---------
Confidence              699999999976432     144567899999999777766653    455 68999999987655321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.+|...+.+.+.++    ..|+++++++||.+.++.....  ..    .....+.
T Consensus       150 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~----~~~~~~~  204 (246)
T 2uvd_A          150 -------------------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL--DE----NIKAEML  204 (246)
T ss_dssp             -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC--CT----THHHHHH
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc--CH----HHHHHHH
Confidence                               24789999999998888776    3489999999999987743321  11    1111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...      .       ...+++++|+|+++..++...  ...| .+++.++
T Consensus       205 ~~~------p-------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  243 (246)
T 2uvd_A          205 KLI------P-------AAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGG  243 (246)
T ss_dssp             HTC------T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcC------C-------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcC
Confidence            110      0       334889999999999998643  2345 6777655

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.91  E-value=1.4e-22  Score=177.98  Aligned_cols=220  Identities=11%  Similarity=0.033  Sum_probs=158.7

Q ss_pred             CCCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            4 KSNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         4 ~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      .++++||||||+  |+||+++++.|++.|++|++++| +.......+.+....   ..+.++.+|+++++++.++++   
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYA-TPKLEKRVREIAKGF---GSDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHH
Confidence            345789999999  99999999999999999999999 764222333332211   246789999999998887775   


Q ss_pred             ----CCCEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                          ++|++||+||....         ...+.++..+++|+.++.++++++...-  +-.++|++||..+..+..     
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----  169 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVP-----  169 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCT-----
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCC-----
Confidence                68999999997642         1145567899999999999999987653  126999999987544221     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                             ....|+.||...+.+.+.++ +   .|+++.+++||.|.++.....   .. ...+.
T Consensus       170 -----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~-~~~~~  222 (285)
T 2p91_A          170 -----------------------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI---TG-FHLLM  222 (285)
T ss_dssp             -----------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C---TT-HHHHH
T ss_pred             -----------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc---cc-hHHHH
Confidence                                   24689999999999998876 3   489999999999998854322   11 12222


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..+....    +         ...+.+++|+|++++.++...  ...| .|++.++
T Consensus       223 ~~~~~~~----p---------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          223 EHTTKVN----P---------FGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             HHHHHHS----T---------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHhcC----C---------CCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            2211110    0         234678999999999998643  2345 6777665

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.91  E-value=9.5e-23  Score=176.64  Aligned_cols=227  Identities=14%  Similarity=0.090  Sum_probs=154.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +....... +.+.... ...++.++.+|++|++++.++++     
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSR-NREKLEAAASRIASLV-SGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHS-TTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcC-CCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999 75432221 1121100 01268899999999999888886     


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||.....     ..+.++..+++|+.++.++++++    ++.+ ..++|++||..++.+..          
T Consensus        84 ~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  152 (260)
T 2z1n_A           84 GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQ----------  152 (260)
T ss_dssp             TCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred             cCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCC----------
Confidence             599999999965432     14456789999999997776665    3455 68999999987544221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchh--hhhHhhH
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSV--IGGLCQL  222 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~--~~~~~~~  222 (341)
                                        ....|+.+|...+.+.+.++ +   .|+++.+++||.++++.....  .....  ..+....
T Consensus       153 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~  212 (260)
T 2z1n_A          153 ------------------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSL--AEERARRSGITVEE  212 (260)
T ss_dssp             ------------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhh--hhhhhcccCCcHHH
Confidence                              25789999999999988876 3   389999999999998854311  00000  0000000


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .  ...+.....      ...+.+++|+|+++..++...  ...| .+++.++
T Consensus       213 ~--~~~~~~~~p------~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          213 A--LKSMASRIP------MGRVGKPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             ---------CCT------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             H--HHHHHhcCC------CCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            0  000000000      334789999999999998753  3456 6677654

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.91  E-value=1.4e-22  Score=177.19  Aligned_cols=216  Identities=15%  Similarity=0.142  Sum_probs=156.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCC-CCceEEEecCCCCh----HHHHHHhc-
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGA-ETRLIFFEAEIYDP----DTFENAIQ-   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~-~~~~~~~~~Dl~~~----~~~~~~~~-   78 (341)
                      ++++|||||+|+||+++++.|++.|++|++++| +..  ...+.+ ..+... ...+.++.+|++++    +.+.++++ 
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYR-HSE--GAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCH--HHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CCh--HHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            468999999999999999999999999999988 422  222221 111100 24688999999999    88887775 


Q ss_pred             ------CCCEEEEeccCCcccc-----c-----------hhHhHhhhhhhhHHHHHHHHHHhcC--Cc------CEEEEe
Q 019415           79 ------GCDFVFHVATPLQHID-----G-----------YLYKNVVEACVGAAKKIASFCVKSG--TV------KRLIYT  128 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~-----~-----------~~~~~~~~~nv~~~~~l~~~~~~~~--~~------~~~I~~  128 (341)
                            ++|++||+||......     .           +.++..+++|+.++.++++++...-  ..      .++|++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                  6899999999754321     2           5567899999999999999998742  13      799999


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCC
Q 019415          129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDT  204 (341)
Q Consensus       129 Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~  204 (341)
                      ||..++.+..                            ....|+.||...+.+.+.++ +   .|+++.+++||.+.++ 
T Consensus       168 sS~~~~~~~~----------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-  218 (276)
T 1mxh_A          168 CDAMTDLPLP----------------------------GFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-  218 (276)
T ss_dssp             CCGGGGSCCT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-
T ss_pred             CchhhcCCCC----------------------------CCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-
Confidence            9988554321                            24789999999999998876 3   3899999999999998 


Q ss_pred             CCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          205 NLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      . ..   +   ......+....+      .      .+++.+++|+|++++.++...  ...| .+++.++
T Consensus       219 ~-~~---~---~~~~~~~~~~~p------~------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          219 P-AM---P---QETQEEYRRKVP------L------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             S-SS---C---HHHHHHHHTTCT------T------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-cC---C---HHHHHHHHhcCC------C------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence            2 11   1   122222221110      0      334889999999999998753  2346 6777665

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.91  E-value=1.1e-22  Score=174.96  Aligned_cols=216  Identities=18%  Similarity=0.169  Sum_probs=151.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC-CchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL-EDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +. .....  .+...   ...+.++.+|++|++++.++++     
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADL-VPAPEAEA--AIRNL---GRRVLTVKCDVSQPGDVEAFGKQVIST   79 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCHHHHH--HHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcC-CchhHHHH--HHHhc---CCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999 76 32111  22222   2478899999999988887754     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||.....     ..+.++..+++|+.++.+++++    +++.+ ..++|++||..++.+..         
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  149 (249)
T 2ew8_A           80 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIE---------  149 (249)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCS---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCC---------
Confidence              789999999975432     1445678899999998888777    45555 68999999987554321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.||...+.+.+.++ +   .|+++.+++||.+.++.....  ...-.....    
T Consensus       150 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~----  204 (249)
T 2ew8_A          150 -------------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS--ALSAMFDVL----  204 (249)
T ss_dssp             -------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------
T ss_pred             -------------------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhc--cccchhhHH----
Confidence                               24789999999999998886 3   489999999999988753211  000000000    


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .. .. .  .       ...+.+++|+|+++..++...  ...| .+++.++
T Consensus       205 ~~-~~-~--~-------~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          205 PN-ML-Q--A-------IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  245 (249)
T ss_dssp             -C-TT-S--S-------SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             HH-hh-C--c-------cCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence            00 00 0  0       345789999999999998643  2456 6677665

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=7.4e-23  Score=175.87  Aligned_cols=223  Identities=11%  Similarity=0.046  Sum_probs=158.2

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh---
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI---   77 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~---   77 (341)
                      |...++|+||||||+|+||+++++.|+++|++|++++| +...   .+.+..+    .++.++.+|++|++++++++   
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~---~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~   72 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI-NESK---LQELEKY----PGIQTRVLDVTKKKQIDQFANEV   72 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HGGGGGS----TTEEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHhc----cCceEEEeeCCCHHHHHHHHHHh
Confidence            65556789999999999999999999999999999999 6533   2222222    26889999999999888665   


Q ss_pred             cCCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           78 QGCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        78 ~~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      .++|++||+||......     .+.++..+++|+.++.++++++.    +.+ ..++|++||..+..+..          
T Consensus        73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  141 (246)
T 2ag5_A           73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV----------  141 (246)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC----------
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCC----------
Confidence            47899999999765421     44567889999999999998875    344 68999999987543211          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .+...|+.+|...|.+.+.++ +   .|++++++|||.++++..................+..
T Consensus       142 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  204 (246)
T 2ag5_A          142 -----------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK  204 (246)
T ss_dssp             -----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH
T ss_pred             -----------------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHh
Confidence                             025789999999999999886 3   4899999999999987321100000000111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .       ..      ...+.+++|+|+++..++...  ...| .+++.++
T Consensus       205 ~-------~~------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          205 R-------QK------TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             T-------CT------TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             c-------CC------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            0       00      334789999999999998653  2356 6677654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.91  E-value=9.7e-23  Score=177.33  Aligned_cols=214  Identities=16%  Similarity=0.115  Sum_probs=157.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +...  ..+.+ ..+......+.++.+|++|++++.++++     
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYA-SSAG--AADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CChH--HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999888 5432  12111 1111223478999999999998887776     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++.    +.+ ..++|++||..+..+...        
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--------  174 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPG--------  174 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCTT--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCC--------
Confidence              6899999999865432     45567899999999999998873    344 579999999886654322        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                          ...|+.||...+.+.+.++ +   .|+++.+++||.|.++.....      ..   ..+.
T Consensus       175 --------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~---~~~~  225 (269)
T 4dmm_A          175 --------------------QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL------AA---EKLL  225 (269)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH------HH---HHHG
T ss_pred             --------------------chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc------cH---HHHH
Confidence                                4789999999988888876 3   489999999999987643211      11   1111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC---CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g-~~n~~~~  272 (341)
                      ..       ..      ...+.+++|+|+++..++..+.   ..| ++++.++
T Consensus       226 ~~-------~p------~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG  265 (269)
T 4dmm_A          226 EV-------IP------LGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGG  265 (269)
T ss_dssp             GG-------CT------TSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred             hc-------CC------CCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence            11       00      4457889999999999997632   346 7788765

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.91  E-value=1.5e-22  Score=177.12  Aligned_cols=225  Identities=16%  Similarity=0.164  Sum_probs=162.3

Q ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            2 DHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         2 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ...+++++|||||+|+||+++++.|++.|++|++++| +.......  ...+......+.++.+|+++++++.++++   
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~--~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTAR-NGNALAEL--TDEIAGGGGEAAALAGDVGDEALHEALVELAV   80 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCS-CHHHHHHH--HHHHTTTTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHH--HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            3445789999999999999999999999999999999 65432222  12222334578999999999988887775   


Q ss_pred             ----CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccc-cCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCA-SPLKEDGSA  143 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~-~~~~~~~~~  143 (341)
                          ++|++||+||.....      ..+.++..+++|+.++.++++++...    + ..++|++||..++ .+.      
T Consensus        81 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~------  153 (280)
T 3tox_A           81 RRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGF------  153 (280)
T ss_dssp             HHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCC------
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCC------
Confidence                689999999975321      14556789999999999999887543    3 4699999998754 211      


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                            .....|+.||...+.+.+.++ +   .|+++.+++||.|.++.....  .+...+...
T Consensus       154 ----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~  209 (280)
T 3tox_A          154 ----------------------AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFAN--LPGAAPETR  209 (280)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGG--STTCCTHHH
T ss_pred             ----------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhh--ccccCHHHH
Confidence                                  125789999999999999887 4   489999999999988754321  101011111


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ..+....       .      ...+.+++|+|++++.++...  ...| ++++.++.
T Consensus       210 ~~~~~~~-------p------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  253 (280)
T 3tox_A          210 GFVEGLH-------A------LKRIARPEEIAEAALYLASDGASFVTGAALLADGGA  253 (280)
T ss_dssp             HHHHTTS-------T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhccC-------c------cCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCc
Confidence            1111110       0      445788999999999998753  2456 77887753

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.91  E-value=1.2e-22  Score=176.31  Aligned_cols=204  Identities=16%  Similarity=0.146  Sum_probs=151.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +...   .   ....  ...+.++.+|++|++++.++++      
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~---~---~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLAR-RVER---L---KALN--LPNTLCAQVDVTDKYTFDTAITRAEKIY   85 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CHHH---H---HTTC--CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHH---H---HHhh--cCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence            3578999999999999999999999999999999 6432   2   2211  1378899999999988887776      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++.    +.+ ..++|++||..++.+..          
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~----------  154 (266)
T 3p19_A           86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFP----------  154 (266)
T ss_dssp             CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCC----------
Confidence             7899999999764322     45567889999999999777663    455 68999999987654322          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.||...+.+.+.++ +   .|+++..++||.|.++.....  ...   ........
T Consensus       155 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~---~~~~~~~~  211 (266)
T 3p19_A          155 ------------------DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHT--TSQ---QIKDGYDA  211 (266)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC--SCH---HHHHHHHH
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcc--cch---hhhHHHHh
Confidence                              24789999999999988887 3   489999999999988743322  111   11111100


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM  263 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  263 (341)
                      .    .  ..      ...+++++|+|+++++++..+..
T Consensus       212 ~----~--~~------~~r~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          212 W----R--VD------MGGVLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             H----H--HH------TTCCBCHHHHHHHHHHHHHSCTT
T ss_pred             h----c--cc------ccCCCCHHHHHHHHHHHHcCCCC
Confidence            0    0  01      44588999999999999987654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.91  E-value=2.4e-22  Score=173.41  Aligned_cols=214  Identities=11%  Similarity=-0.003  Sum_probs=153.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +...   .+.+...  ....+.++.+|+++++++.++++      
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADV-LDEE---GAATARE--LGDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHT--TGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHH--hCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 6533   2222111  12368899999999998888876      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHH----HHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKI----ASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||.....     ..+.++..+++|+.++..+    +..+++.+ ..++|++||..++.+..          
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  146 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLA----------  146 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC----------
Confidence             799999999975432     1445678999999999854    45555665 68999999987554321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+.+.++ +   .|+++.++|||.++++...          .+.   ..
T Consensus       147 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----------~~~---~~  195 (254)
T 1hdc_A          147 ------------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA----------ETG---IR  195 (254)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----------HHT---CC
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcccc----------ccc---hh
Confidence                              24789999999999998876 3   4899999999999876311          000   00


Q ss_pred             CccccccccchhhccCCCCcc-cHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLV-HIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i-~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....+.....      ...+. +++|+|+++..++...  ...| .+++.++
T Consensus       196 ~~~~~~~~~p------~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          196 QGEGNYPNTP------MGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             CSTTSCTTST------TSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhcCC------CCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            0000000000      23367 8999999999998753  2456 6677665

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=1.7e-22  Score=176.87  Aligned_cols=210  Identities=17%  Similarity=0.187  Sum_probs=147.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +....... +.+... .....+.++.+|++|++++.++++     
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCAR-TVGNIEELAAECKSA-GYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT-TCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEC-ChHHHHHHHHHHHhc-CCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999 75432222 122221 112368899999999998887776     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhH----HHHHHHHHHhcCCc--CEEEEecccccccCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGA----AKKIASFCVKSGTV--KRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~--~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                        ++|+|||+||.....     ..+.++..+++|+.+    +.+++..+++.+ .  .+||++||..+.....       
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~~-------  180 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRVLP-------  180 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSCCS-------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhcccCC-------
Confidence              799999999975432     144567889999999    677777777776 5  7999999987432100       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                         ..+...|+.+|...+.+.+.++ +     .++++.+++||.|.++....          . 
T Consensus       181 -------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~----------~-  230 (279)
T 1xg5_A          181 -------------------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK----------L-  230 (279)
T ss_dssp             -------------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH----------H-
T ss_pred             -------------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh----------h-
Confidence                               1235789999999998888765 2     48999999999997763100          0 


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                        ............      ....+++++|+|++++.++..+.
T Consensus       231 --~~~~~~~~~~~~------~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          231 --HDKDPEKAAATY------EQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             --TTTCHHHHHHHH------C---CBCHHHHHHHHHHHHHSCT
T ss_pred             --cccChhHHhhhc------ccccCCCHHHHHHHHHHHhcCCc
Confidence              000000000000      03347899999999999998643

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.90  E-value=4.7e-23  Score=183.70  Aligned_cols=246  Identities=15%  Similarity=0.071  Sum_probs=154.3

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ..++++||||||+|+||+++++.|+++|++|++++| +........ .+... .....+.++.+|+++++++.++++   
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADI-RQDSIDKALATLEAE-GSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH-TCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhc-CCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            345679999999999999999999999999999999 765433222 22211 112378999999999998888775   


Q ss_pred             ----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC---------CcCEEEEecccccccCCCCC
Q 019415           79 ----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG---------TVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~I~~Ss~~~~~~~~~~  140 (341)
                          ++|+|||+||......     .+.++..+++|+.++.++++++....         ...+||++||..++.+... 
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~-  161 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS-  161 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS-
T ss_pred             HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC-
Confidence                5799999999754322     45567899999999999998875542         1357999999986553222 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhh----ccCCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSY----GSSGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~----~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                                 ...|+.||...+.+.+.+    ...|+++++++||.|.++........+....
T Consensus       162 ---------------------------~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~  214 (319)
T 3ioy_A          162 ---------------------------PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALK  214 (319)
T ss_dssp             ---------------------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---------------
T ss_pred             ---------------------------CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhc
Confidence                                       478999999665555554    4458999999999998875433200000000


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccc--cCHHHHHHHHHHhCC
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVF--VSSAEIASCLQQNYP  288 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~--~s~~e~~~~i~~~~~  288 (341)
                      .........  .......     .....++++|+|++++.+++++.   .+.+++..  -.+++....+...+|
T Consensus       215 ~~~~~~~~~--~~~~~~~-----~~~~~~~pe~vA~~~~~al~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~  278 (319)
T 3ioy_A          215 GEVKPVDKT--AVERLAG-----VHEFGMEPDVIGARVIEAMKANR---LHIFSHPDHKEELREVFDEIIAEYQ  278 (319)
T ss_dssp             ----------------CC-----GGGSSBCHHHHHHHHHHHHHTTC---SEECCCSTTHHHHHHHHHHHHHTCC
T ss_pred             ccccchhHH--HHHHHHH-----hhhcCCCHHHHHHHHHHHHHcCC---CEEEcCHHHHHHHHHHHHHHHHhhh
Confidence            000000000  0000000     01123789999999999998643   23333322  134444444444444

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.90  E-value=5.2e-22  Score=177.08  Aligned_cols=239  Identities=15%  Similarity=0.142  Sum_probs=156.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc--hhhhhHhhhC-CCCCCceEEEecCCCChHHHHHHhc----
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED--KSKVDLLKSL-PGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      +++||||||+|+||+++++.|++.|++|++++| +...  ....+.+... ......+.++.+|++|++++.++++    
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r-~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMR-DIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecC-cccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999 7432  2222222211 1112478999999999998888876    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||..+..+..+       
T Consensus        84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~-------  155 (324)
T 3u9l_A           84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPP-------  155 (324)
T ss_dssp             HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCS-------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCC-------
Confidence               7999999999754321     4456788999999999999998    5556 689999999875432111       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCC-CCCchhhhhHhh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYS-STPVSVIGGLCQ  221 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~-~~~~~~~~~~~~  221 (341)
                                          ....|+.||...|.+.+.++ +   .|+++++++||.+.++...... ..+.........
T Consensus       156 --------------------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  215 (324)
T 3u9l_A          156 --------------------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEY  215 (324)
T ss_dssp             --------------------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHH
T ss_pred             --------------------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhh
Confidence                                14789999999999999887 4   5999999999999866432210 011111111111


Q ss_pred             HhcCccccccccchhh--ccCCCCcccHHHHHHHHHHhhcCCCCC--ceEEEeccccC
Q 019415          222 LTNNEYVYQTLRDTEE--ILGKLPLVHIDDVCEAHIFCMEKPSMS--GRFFCTNVFVS  275 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~--g~~n~~~~~~s  275 (341)
                      ......  +.......  .....+..+++|+|++++.++..+...  ..+.+++....
T Consensus       216 ~~~~~~--~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~  271 (324)
T 3u9l_A          216 EAGPNA--GLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG  271 (324)
T ss_dssp             HHTTTT--THHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred             cccccc--CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence            100000  00000000  000223367899999999999876422  25667654444

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.90  E-value=2.8e-22  Score=171.98  Aligned_cols=197  Identities=11%  Similarity=0.084  Sum_probs=150.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-------IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      +|+||||||+|+||+++++.|++.|+       +|++++| +.........  .+......+.++.+|+++++.+.++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r-~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR-TAADLEKISL--ECRAEGALTDTITADISDMADVRRLTT   78 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES-CHHHHHHHHH--HHHTTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC-CHHHHHHHHH--HHHccCCeeeEEEecCCCHHHHHHHHH
Confidence            47899999999999999999999999       9999999 6543222211  111123478999999999998888776


Q ss_pred             -------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                             ++|+|||+||.....     ..+.++..+++|+.++.++++++..    .+ ..+||++||..++.+.     
T Consensus        79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----  152 (244)
T 2bd0_A           79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF-----  152 (244)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----
T ss_pred             HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCC-----
Confidence                   699999999976432     1445678899999999999988743    44 6899999998754422     


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                             .+...|+.+|...|.+++.++    ..|++++++|||.++++.....   +.     
T Consensus       153 -----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~-----  201 (244)
T 2bd0_A          153 -----------------------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV---DD-----  201 (244)
T ss_dssp             -----------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC---CS-----
T ss_pred             -----------------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc---cc-----
Confidence                                   124789999999999987765    3589999999999999854321   00     


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                            . .             ...+++++|+|++++.++..+.
T Consensus       202 ------~-~-------------~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          202 ------E-M-------------QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             ------T-T-------------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             ------c-c-------------cccCCCHHHHHHHHHHHHhCCc
Confidence                  0 0             1247889999999999997643

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.90  E-value=1.4e-22  Score=175.20  Aligned_cols=218  Identities=16%  Similarity=0.092  Sum_probs=160.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +........ .+..   ....+.++.+|++|++++.++++     
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDL-KSEGAEAVAAAIRQ---AGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEES-SHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4579999999999999999999999999999999 764432221 2222   23578999999999988887775     


Q ss_pred             --CCCEEEEeccCCccc----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                        ++|++||+||.....    ..+.++..+++|+.++.++++++.    +.+ ..++|++||..+..+..          
T Consensus        87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  155 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNV----------  155 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCT----------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCC----------
Confidence              789999999976542    145567899999999999999874    344 57999999987544321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.||...+.+.+.++ +   .|+++..++||.+.++.....     ..+.....+..
T Consensus       156 ------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~~~~  212 (256)
T 3gaf_A          156 ------------------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV-----LTPEIERAMLK  212 (256)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH-----CCHHHHHHHHT
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc-----cCHHHHHHHHh
Confidence                              25789999999999999887 3   489999999999977632110     00111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      .       ..      ...+.+++|+|+++.+++...  ...| ++++.++.
T Consensus       213 ~-------~p------~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~  251 (256)
T 3gaf_A          213 H-------TP------LGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGG  251 (256)
T ss_dssp             T-------CT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             c-------CC------CCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCc
Confidence            1       01      455789999999999998643  2356 78887764

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.90  E-value=3.9e-22  Score=173.36  Aligned_cols=219  Identities=14%  Similarity=0.055  Sum_probs=155.9

Q ss_pred             CCcEEEEecCcch-HHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEGF-VGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++++||||||+|+ ||+++++.|+++|++|++++| +....... +.+...  ...+++++.+|++|+++++++++    
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDY-HERRLGETRDQLADL--GLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTT--CSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecC-CHHHHHHHHHHHHhc--CCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            5679999999985 999999999999999999999 76442222 222221  12479999999999988887775    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++.++++++...    +...++|++||.....+..        
T Consensus        98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------  169 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH--------  169 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT--------
T ss_pred             HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC--------
Confidence               6799999999755422     4456788999999999999987654    1257899999987544321        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          +...|+.+|...+.+.+.++ +   .|+++..++||.+..+.....  .   .......+
T Consensus       170 --------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~---~~~~~~~~  224 (266)
T 3o38_A          170 --------------------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT--S---SSELLDRL  224 (266)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------
T ss_pred             --------------------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc--C---cHHHHHHH
Confidence                                25789999999999998887 3   589999999999987743322  0   01111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .       ....      ...+.+++|+|+++.+++...  ...| ++++.++
T Consensus       225 ~-------~~~~------~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          225 A-------SDEA------FGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             ---------CCT------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             H-------hcCC------cCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCC
Confidence            1       1111      456789999999999998753  3456 6777665

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.90  E-value=1.3e-22  Score=175.78  Aligned_cols=219  Identities=13%  Similarity=0.111  Sum_probs=158.9

Q ss_pred             CCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|+||||||+  |+||+++++.|+++|++|++++| +.......+.+....   ..+.++.+|++|++++.++++    
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ-AERLRPEAEKLAEAL---GGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEES-CGGGHHHHHHHHHHT---TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999  99999999999999999999999 764222333332211   247899999999998888776    


Q ss_pred             ---CCCEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         ++|++||+||....         ...+.++..+++|+.++.++++++...- .-.++|++||..+..+..       
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-------  155 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP-------  155 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT-------
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCC-------
Confidence               68999999997542         1145567899999999999999997752 025999999977544221       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...+.+.+.++ +   .|+++.+++||.|+++.....   .. ...+...
T Consensus       156 ---------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~-~~~~~~~  210 (261)
T 2wyu_A          156 ---------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI---PG-FTKMYDR  210 (261)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC---TT-HHHHHHH
T ss_pred             ---------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc---cc-cHHHHHH
Confidence                                 24689999999999998886 3   389999999999998743221   00 1122221


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      +....       .      ...+.+++|+|+++..++...  ...| .|++.++
T Consensus       211 ~~~~~-------p------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  251 (261)
T 2wyu_A          211 VAQTA-------P------LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG  251 (261)
T ss_dssp             HHHHS-------T------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhcC-------C------CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            11110       0      334778999999999998643  2345 7888765

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.90  E-value=6.4e-23  Score=180.81  Aligned_cols=220  Identities=14%  Similarity=0.098  Sum_probs=157.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +... ...+.+.. .......+.++.+|++|+++++++++     
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  125 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYL-PAEE-EDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA  125 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-GGGH-HHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-Ccch-hHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4579999999999999999999999999999888 5332 11221111 11123578999999999988877764     


Q ss_pred             --CCCEEEEeccCCcc-c-----cchhHhHhhhhhhhHHHHHHHHHHhcCCc--CEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH-I-----DGYLYKNVVEACVGAAKKIASFCVKSGTV--KRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~-~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                        ++|++||+||.... .     ..+.++..+++|+.++.++++++...- .  .++|++||..++.+..          
T Consensus       126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~g~Iv~isS~~~~~~~~----------  194 (294)
T 3r3s_A          126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL-PKGASIITTSSIQAYQPSP----------  194 (294)
T ss_dssp             HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-CTTCEEEEECCGGGTSCCT----------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-hcCCEEEEECChhhccCCC----------
Confidence              68999999997542 1     145567899999999999999998764 3  4999999988654321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.||...+.+.+.++ +   .|+++..++||.|.++......    ........+..
T Consensus       195 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~  252 (294)
T 3r3s_A          195 ------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG----QTQDKIPQFGQ  252 (294)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT----SCGGGSTTTTT
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC----CCHHHHHHHHh
Confidence                              24789999999999998887 3   3899999999999886411110    00011111100


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .       ..      ...+...+|+|+++++++...  ...| ++++.++
T Consensus       253 ~-------~p------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  290 (294)
T 3r3s_A          253 Q-------TP------MKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_dssp             T-------ST------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-------CC------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            0       01      445778999999999988643  2456 7788765

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.90  E-value=1.6e-22  Score=174.59  Aligned_cols=219  Identities=13%  Similarity=0.087  Sum_probs=156.0

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYI-VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~   78 (341)
                      |+ .++|+||||||+|+||+++++.|+++|++ |++++| +... ...+.+..... ..++.++.+|++|+ +++.++++
T Consensus         1 m~-l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r-~~~~-~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   76 (254)
T 1sby_A            1 MD-LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR-VENP-TALAELKAINP-KVNITFHTYDVTVPVAESKKLLK   76 (254)
T ss_dssp             CC-CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES-SCCH-HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHH
T ss_pred             CC-CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec-CchH-HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHH
Confidence            44 34689999999999999999999999997 999999 7543 33333333211 24688999999998 77777665


Q ss_pred             -------CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC------CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG------TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                             ++|++||+||....   +.++..+++|+.++.++++++...-      ...++|++||..++.+..       
T Consensus        77 ~~~~~~g~id~lv~~Ag~~~~---~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------  146 (254)
T 1sby_A           77 KIFDQLKTVDILINGAGILDD---HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-------  146 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCT---TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-------
T ss_pred             HHHHhcCCCCEEEECCccCCH---HHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC-------
Confidence                   78999999997543   3366899999999999999886431      025799999987544221       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...|.+.+.++ +   .|+++++++||.+.++.....   ..+.      
T Consensus       147 ---------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~------  196 (254)
T 1sby_A          147 ---------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF---NSWL------  196 (254)
T ss_dssp             ---------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC---CCGG------
T ss_pred             ---------------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcccccc---chhh------
Confidence                                 24789999999999999887 3   589999999999988742211   0000      


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                        ...........      ..++.+++|+|++++.++.. ...| +|++.++
T Consensus       197 --~~~~~~~~~~~------~~~~~~~~dvA~~i~~~~~~-~~~G~~~~v~gG  239 (254)
T 1sby_A          197 --DVEPRVAELLL------SHPTQTSEQCGQNFVKAIEA-NKNGAIWKLDLG  239 (254)
T ss_dssp             --GSCTTHHHHHT------TSCCEEHHHHHHHHHHHHHH-CCTTCEEEEETT
T ss_pred             --hhhHHHHHHHh------cCCCCCHHHHHHHHHHHHHc-CCCCCEEEEeCC
Confidence              00000000000      23456899999999998874 3445 7888765

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.90  E-value=2.7e-22  Score=175.48  Aligned_cols=223  Identities=15%  Similarity=0.104  Sum_probs=158.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++++|||||+|.||+++++.|+++|++|++++| +........  ..+......+.++.+|++|++++.++++       
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~--~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCAR-DAKNVSAAV--DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999 754322221  1122223579999999999988887765       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh------cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK------SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~------~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                      ++|++||+||......     .+.++..+++|+.++.++++++..      .+ ..++|++||..+..+..         
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~---------  170 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVM---------  170 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCT---------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCC---------
Confidence            6899999999765432     445678899999999999998755      34 57999999987554322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-----CCCCchhhhh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-----SSTPVSVIGG  218 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-----~~~~~~~~~~  218 (341)
                                         ....|+.||...+.+.+.++ +   .|+++..++||.|.++.....     ..........
T Consensus       171 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  231 (279)
T 3sju_A          171 -------------------YAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEV  231 (279)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHH
T ss_pred             -------------------CChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHH
Confidence                               24789999999999988877 4   489999999999977521110     0000000111


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ...+...       .      ....+.+++|+|+++..++....  ..| ++++.++-
T Consensus       232 ~~~~~~~-------~------p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          232 HERFNAK-------I------PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             HHHHHTT-------C------TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             HHHHHhc-------C------CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            1111111       0      14557889999999999987543  456 77886653

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.90  E-value=2.7e-22  Score=175.25  Aligned_cols=220  Identities=14%  Similarity=0.120  Sum_probs=156.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +........  ...   ...+.++.+|++|+++++++++      
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADV-NEDAAVRVA--NEI---GSKAFGVRVDVSSAKDAESMVEKTTAKW   99 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHH--HHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHh---CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999 654322211  111   2478899999999998887776      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++.    +.+ ..++|++||..++.+..          
T Consensus       100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  168 (277)
T 4dqx_A          100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIA----------  168 (277)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCC----------
Confidence             7899999999754322     45567889999999999888874    333 46999999987544321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-CCCCchhhhhHhhHh
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-SSTPVSVIGGLCQLT  223 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-~~~~~~~~~~~~~~~  223 (341)
                                        ....|+.||...+.+.+.++ +   .|+++.+++||.|..+..... ..... .........
T Consensus       169 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~  229 (277)
T 4dqx_A          169 ------------------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKD-PAKLRSDFN  229 (277)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSC-HHHHHHHHH
T ss_pred             ------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccc-hhHHHHHHH
Confidence                              25789999999999998887 3   389999999999976521000 00000 000000011


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                             ...      ....+.+++|+|+++++++....  ..| ++++.++.
T Consensus       230 -------~~~------~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (277)
T 4dqx_A          230 -------ARA------VMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGS  269 (277)
T ss_dssp             -------TTS------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             -------hcC------cccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCch
Confidence                   111      14557889999999999987533  356 77887654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.90  E-value=6.7e-23  Score=178.02  Aligned_cols=226  Identities=15%  Similarity=0.105  Sum_probs=160.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|+||||||+|+||+++++.|++.|++|++++| +...... .+.+...  ....+.++.+|++|++++.++++     
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYR-SAADAVEVTEKVGKE--FGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEES-SCTTHHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-cchhhHHHHHHHHHh--cCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999 6554221 2222111  12478999999999988887765     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+||.....     ..+.++..+++|+.++.++++++...    +...+||++||..++.+....       
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-------  162 (265)
T 1h5q_A           90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-------  162 (265)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-------
Confidence              489999999976532     14455688999999999999987543    213789999998755432110       


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                       .   +          ...+...|+.+|...|.+++.++ +   .|++++++|||.++++.....      .+.....+.
T Consensus       163 -~---~----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~~  222 (265)
T 1h5q_A          163 -L---N----------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM------DKKIRDHQA  222 (265)
T ss_dssp             -T---T----------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS------CHHHHHHHH
T ss_pred             -c---c----------ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc------chhHHHHHH
Confidence             0   0          01235789999999999998886 3   489999999999988743321      111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ...       .      ...+++++|+|+++..++....  ..| .|++.++.
T Consensus       223 ~~~-------~------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          223 SNI-------P------LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             HTC-------T------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             hcC-------c------ccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCE
Confidence            110       0      3457899999999999987532  345 78887753

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.90  E-value=3.6e-22  Score=174.24  Aligned_cols=220  Identities=15%  Similarity=0.111  Sum_probs=154.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHh------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAI------   77 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~------   77 (341)
                      +++++|||||+|+||+++++.|++.|++|++++| +....... +.+..   ....+.++.+|+++++++.+++      
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR-NEKELDECLEIWRE---KGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 75432221 12222   1247889999999998888776      


Q ss_pred             --cCCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           78 --QGCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        78 --~~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        .++|++||+||.....     ..+.++..+++|+.++.++++++.    +.+ ..++|++||..++.+..        
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------  166 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALP--------  166 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCT--------
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCC--------
Confidence              4689999999975432     144567889999999999999874    444 58999999987544221        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch--hhhhHh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS--VIGGLC  220 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~--~~~~~~  220 (341)
                                          ....|+.||...+.+.+.++ +   .|+++.+++||.++++.....  ....  ......
T Consensus       167 --------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~  224 (273)
T 1ae1_A          167 --------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA--IKKNPHQKEEID  224 (273)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------CHHHHH
T ss_pred             --------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhh--hhcccCcHHHHH
Confidence                                24789999999999998876 3   489999999999998853321  0000  001111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .+...       ..      ...+.+++|+|+++..++...  ...| ++++.++
T Consensus       225 ~~~~~-------~p------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          225 NFIVK-------TP------MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             HHHHH-------ST------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhc-------CC------CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence            11100       00      334788999999999988643  2356 6777665

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.90  E-value=1e-22  Score=176.09  Aligned_cols=218  Identities=18%  Similarity=0.155  Sum_probs=157.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++|.+...... ...+..   ....+.++.+|++|++++.++++     
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA---LGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            458999999999999999999999999999988414433222 222222   23478999999999988887776     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||..+..+..         
T Consensus        89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  158 (256)
T 3ezl_A           89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQF---------  158 (256)
T ss_dssp             TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCS---------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCC---------
Confidence              6899999999765321     4556789999999988887766    4455 67999999987655332         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         +...|+.||...+.+.+.++ +   .|+++.+++||.+..+.....      .+.....+.
T Consensus       159 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~  213 (256)
T 3ezl_A          159 -------------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI------RPDVLEKIV  213 (256)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS------CHHHHHHHH
T ss_pred             -------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc------CHHHHHHHH
Confidence                               25789999999998888876 3   489999999999977643221      112222211


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ...       .      ...+.+++|+|+++.+++...  ...| ++++.++.
T Consensus       214 ~~~-------~------~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          214 ATI-------P------VRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL  253 (256)
T ss_dssp             HHS-------T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             hcC-------C------CCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCE
Confidence            110       0      455778999999999988643  3456 77887653

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.90  E-value=1.9e-22  Score=175.79  Aligned_cols=217  Identities=18%  Similarity=0.152  Sum_probs=156.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhh-hCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLK-SLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +...  ..+.+. .+......+.++.+|+++++++.++++     
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r-~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~  104 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYR-SNAE--VADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS  104 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CCHH--HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999 5433  111111 111123478999999999988887775     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||..+..+..         
T Consensus       105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  174 (271)
T 4iin_A          105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNM---------  174 (271)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---------
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCC---------
Confidence              7899999999865432     455678899999999998887643    34 57999999987655322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         +...|+.+|...+.+.+.++ +   .++++..++||.+..+.....      .......  
T Consensus       175 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------~~~~~~~--  227 (271)
T 4iin_A          175 -------------------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL------KDELKAD--  227 (271)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------------
T ss_pred             -------------------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh------cHHHHHH--
Confidence                               25789999999999999887 4   589999999999977643221      1111100  


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                           +.....      ...+.+++|+|+++..++....  ..| ++++.++
T Consensus       228 -----~~~~~~------~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          228 -----YVKNIP------LNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             -----CGGGCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----HHhcCC------cCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence                 011111      4568899999999999987532  456 7777665

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.90  E-value=7.1e-22  Score=173.10  Aligned_cols=229  Identities=14%  Similarity=0.105  Sum_probs=158.9

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .+++++|||||+|.||+++++.|++.|++|++++| +.......  ...+......+.++.+|++|++++.++++     
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~--~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGR-TRTEVEEV--ADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHH--HHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999 65432222  12222334578999999999988887775     


Q ss_pred             --CCCEEEEeccCCcc-c-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH-I-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~-~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        ++|++||+||.... .     ..+.++..+++|+.++.++++++    ++.+ ..++|++||.........       
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~-------  174 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTT-------  174 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCS-------
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCC-------
Confidence              69999999997532 1     14556789999999999999988    5555 689999999874331111       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         .+...|+.||...+.+.+.++ +   .|+++..++||.|..+.....  ...  .......
T Consensus       175 -------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~--~~~~~~~  231 (283)
T 3v8b_A          175 -------------------PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT--KLR--HEEETAI  231 (283)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT--TBC--CHHHHSC
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc--ccc--cchhhhh
Confidence                               125789999999999999887 4   489999999999988754332  000  0000000


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                       ... .......    .....+...+|+|+++.+++...  ...| ++++.++
T Consensus       232 -~~~-~~~~~~p----~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          232 -PVE-WPKGQVP----ITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             -CCB-CTTCSCG----GGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -hhh-hhhhcCc----cccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence             000 0000000    00134678999999999998643  3456 6677655

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.90  E-value=1.9e-22  Score=177.34  Aligned_cols=245  Identities=13%  Similarity=0.020  Sum_probs=165.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc---------hhhhhHhh-hCCCCCCceEEEecCCCCh
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED---------KSKVDLLK-SLPGAETRLIFFEAEIYDP   70 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~Dl~~~   70 (341)
                      |...++++||||||+|+||+++++.|+++|++|++++| +...         ....+... .+......+.++.+|++|+
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDI-CHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcc-cccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            55556789999999999999999999999999999998 6221         11121111 1111235789999999999


Q ss_pred             HHHHHHhc-------CCCEEEEeccCCccc---cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCC
Q 019415           71 DTFENAIQ-------GCDFVFHVATPLQHI---DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKE  139 (341)
Q Consensus        71 ~~~~~~~~-------~~d~Vi~~a~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~  139 (341)
                      +++.++++       ++|++||+||.....   ..+.++..+++|+.++.++++++...- .-.++|++||...+.+...
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~  163 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ  163 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc
Confidence            98887776       799999999986543   245667999999999999999998752 1359999999876653321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchh
Q 019415          140 DGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSV  215 (341)
Q Consensus       140 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~  215 (341)
                             .+..|..          .......|+.||...+.+.+.++ +   .|+++..++||.|..+.....    ...
T Consensus       164 -------~~~~~~~----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----~~~  222 (287)
T 3pxx_A          164 -------PPGAGGP----------QGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA----PMY  222 (287)
T ss_dssp             -------CC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH----HHH
T ss_pred             -------ccccccc----------CCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc----chh
Confidence                   1222221          12346789999999999999887 4   389999999999988754321    000


Q ss_pred             hhhHhhHhcCc-----cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          216 IGGLCQLTNNE-----YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       216 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..+........     ........     ....+.+++|+|+++.+++...  ...| ++++.++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG  282 (287)
T 3pxx_A          223 RQFRPDLEAPSRADALLAFPAMQA-----MPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG  282 (287)
T ss_dssp             HHHCTTSSSCCHHHHHHHGGGGCS-----SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhccccccchhHHHHhhhhhhcc-----cCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence            00000000000     00000000     0356899999999999998643  3456 7788765

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.90  E-value=2.1e-22  Score=177.25  Aligned_cols=220  Identities=11%  Similarity=0.064  Sum_probs=160.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch-hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK-SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +.... .......  ......+.++.+|++|+++++++++     
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYL-DEEGDANETKQYV--EKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCHHHHHHHHHHH--HTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CchHHHHHHHHHH--HhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4579999999999999999999999999999999 65421 1111111  1223578999999999988887775     


Q ss_pred             --CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ++|++||+||.....      ..+.++..+++|+.++.++++++...- ...++|++||..++.+..           
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  191 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE-----------  191 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------
Confidence              689999999975431      245567899999999999999998752 135999999998665322           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       ....|+.||...+.+.+.++ +   .|+++..++||.|+++.....     +.......+.  
T Consensus       192 -----------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~~~--  247 (291)
T 3ijr_A          192 -----------------TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSS-----FDEKKVSQFG--  247 (291)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHH-----SCHHHHHHTT--
T ss_pred             -----------------CChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccccc-----CCHHHHHHHH--
Confidence                             24789999999999998887 4   389999999999988632110     0011111111  


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                           ....      ...+.+++|+|+++++++...  ...| ++++.++.
T Consensus       248 -----~~~p------~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  287 (291)
T 3ijr_A          248 -----SNVP------MQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGV  287 (291)
T ss_dssp             -----TTST------TSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             -----ccCC------CCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCc
Confidence                 1011      456788999999999998653  2456 67776653

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=2.5e-22  Score=172.68  Aligned_cols=203  Identities=17%  Similarity=0.146  Sum_probs=147.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++||||||+|+||+++++.|++.|  ++|++++| +.....   .+...  ....++++.+|+++++++.++++     
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r-~~~~~~---~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR-DVEKAT---ELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES-SGGGCH---HHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEec-CHHHHH---HHHhc--cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999  99999999 765433   23222  13578999999999998888876     


Q ss_pred             ----CCCEEEEeccCCc-cc-----cchhHhHhhhhhhhHHHHHHHHHHhc----------CC----cCEEEEecccccc
Q 019415           79 ----GCDFVFHVATPLQ-HI-----DGYLYKNVVEACVGAAKKIASFCVKS----------GT----VKRLIYTASVLCA  134 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~-~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~----~~~~I~~Ss~~~~  134 (341)
                          ++|+|||+||... ..     ..+.++..+++|+.++.++++++...          +.    ..+||++||..++
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             cCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence                7999999999765 21     14456788999999999998887543          11    4799999998755


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC---CceEEEEecCceeCCCCCCCCC
Q 019415          135 SPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS---GLEVVALALGVVAGDTNLPYSS  210 (341)
Q Consensus       135 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~---~~~~~vlRp~~v~G~~~~~~~~  210 (341)
                      .+...           +.++          ..+...|+.+|...+.+++.++ +.   |+++.++|||.+.++...    
T Consensus       157 ~~~~~-----------~~~~----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----  211 (250)
T 1yo6_A          157 ITDNT-----------SGSA----------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG----  211 (250)
T ss_dssp             STTCC-----------STTS----------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------
T ss_pred             cCCcc-----------cccc----------cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC----
Confidence            53211           0110          1235789999999999998887 43   899999999999665311    


Q ss_pred             CCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceEEE
Q 019415          211 TPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRFFC  269 (341)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~n~  269 (341)
                                                    ...+++.+|+|++++.++....  ..|.|..
T Consensus       212 ------------------------------~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~  242 (250)
T 1yo6_A          212 ------------------------------KNAALTVEQSTAELISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             -------------------------------------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred             ------------------------------CCCCCCHHHHHHHHHHHHhcccccCCCeEEE
Confidence                                          0125679999999999998654  3565544

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.90  E-value=2.2e-22  Score=175.47  Aligned_cols=219  Identities=13%  Similarity=0.121  Sum_probs=151.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++||||||+|+||+++++.|++.|++|+++ .| +.........  .+......+.++.+|++|++++.++++      
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAA-NREAADAVVA--AITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHH--HHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCC-ChhHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999887 44 4332221111  111223578999999999988887775      


Q ss_pred             -CCCEEEEeccCCcc-c-----cchhHhHhhhhhhhHHHHHHHHHHhc------CCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQH-I-----DGYLYKNVVEACVGAAKKIASFCVKS------GTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~-~-----~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                       ++|+|||+||.... .     ..+.++..+++|+.++.++++++...      +...+||++||..+..+...      
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------  176 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT------  176 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC------
Confidence             68999999997653 1     24556789999999999998887654      11468999999886664321      


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...+.+++.++ +   .|+++.+++||.|.++.....     ........
T Consensus       177 ---------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~  230 (272)
T 4e3z_A          177 ---------------------QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG-----GLPDRARE  230 (272)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------
T ss_pred             ---------------------CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc-----CChHHHHH
Confidence                                 13679999999999988876 3   389999999999988753321     01111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      +...       ..      ...+.+++|+|++++.++....  ..| +|++.++
T Consensus       231 ~~~~-------~~------~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          231 MAPS-------VP------MQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             ---C-------CT------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Hhhc-------CC------cCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            1111       01      3446789999999999986432  345 7888765

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.90  E-value=2.1e-22  Score=174.77  Aligned_cols=215  Identities=13%  Similarity=0.093  Sum_probs=153.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +...             ..++.++.+|++|+++++++++      
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSI-HDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-SCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEec-Cccc-------------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999 6542             2368899999999998888776      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||.....     ..+.++..+++|+.++.++++++..    .+ ..++|++||..+..+.           
T Consensus        73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----------  140 (264)
T 2dtx_A           73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIIT-----------  140 (264)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCC-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCC-----------
Confidence             699999999975432     2445678999999999988888754    34 5799999998754422           


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCC--ceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSG--LEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~--~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       .+...|+.||...+.+.+.++ +.+  +++.+++||.+.++..          ..+.......
T Consensus       141 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~----------~~~~~~~~~~  193 (264)
T 2dtx_A          141 -----------------KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLV----------RKAAELEVGS  193 (264)
T ss_dssp             -----------------TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHH----------HHHHHHHHCS
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcch----------hhhhhccccc
Confidence                             125789999999999998887 432  9999999999966521          1110000000


Q ss_pred             cc-cc-ccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          226 EY-VY-QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       226 ~~-~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .. .+ ..............+++++|+|+++..++...  ...| .+++.++
T Consensus       194 ~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (264)
T 2dtx_A          194 DPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGG  245 (264)
T ss_dssp             CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            00 00 00000000001456899999999999998753  2456 6777665

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=3.2e-22  Score=177.27  Aligned_cols=223  Identities=15%  Similarity=0.122  Sum_probs=157.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhC-C-CCCCceEEEecCCCChHHHHHHhc---
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSL-P-GAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +....... +.+... . .....+.++.+|+++++.+.++++   
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASR-KLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 75432211 122211 0 123478999999999998888776   


Q ss_pred             ----CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                          ++|+|||+||.....     ..+.++..+++|+.++.++++++...    + ..++|++||.. ..+..       
T Consensus        96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~~-------  166 (303)
T 1yxm_A           96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGFP-------  166 (303)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCCT-------
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCCC-------
Confidence                489999999964322     13445688999999999999997652    2 47899999987 44221       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.+|...+.+.+.++ +   .|++++++|||.++|+.....  .......+...
T Consensus       167 ---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~  223 (303)
T 1yxm_A          167 ---------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVEN--YGSWGQSFFEG  223 (303)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTT--SGGGGGGGGTT
T ss_pred             ---------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhh--ccccchHHHHH
Confidence                                 14689999999999998876 4   389999999999999842111  11111111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      +..      ...       ...+++++|+|++++.++....  ..| .+++.++.
T Consensus       224 ~~~------~~p-------~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~  265 (303)
T 1yxm_A          224 SFQ------KIP-------AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGR  265 (303)
T ss_dssp             GGG------GST-------TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHh------cCc-------ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCe
Confidence            110      000       3447899999999999986532  456 77887653

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.90  E-value=4e-22  Score=174.08  Aligned_cols=219  Identities=13%  Similarity=0.107  Sum_probs=160.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|++|||||+|+||+++++.|+++|++|++++| +........ .+..   ....+.++++|++|+++++++++     
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAAR-HSDALQVVADEIAG---VGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-SGGGGHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 765433222 2222   23478899999999998888876     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++...    +.-.++|++||.....+...        
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~--------  178 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP--------  178 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS--------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC--------
Confidence              7999999999865432     4556788899999999999887543    21268999999875442211        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                        .+...|+.||...+.+.+.++ +   .|+++..++||.|..+.....       ......+.
T Consensus       179 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-------~~~~~~~~  233 (276)
T 3r1i_A          179 ------------------QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL-------ADYHALWE  233 (276)
T ss_dssp             ------------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG-------GGGHHHHG
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-------hHHHHHHH
Confidence                              124789999999999999887 4   589999999999987643221       11111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ...       .      ...+..++|+|+++.+++...  ...| ++++.++.
T Consensus       234 ~~~-------p------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          234 PKI-------P------LGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             GGS-------T------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             hcC-------C------CCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence            110       0      345778999999999998743  3456 67776653

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.90  E-value=1.7e-22  Score=173.66  Aligned_cols=220  Identities=14%  Similarity=0.138  Sum_probs=159.7

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |+..+++++|||||+|.||+++++.|++.|++|++++| +.......  ...+   ...+.++.+|++|+++++++++  
T Consensus         1 ~~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~--~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~   74 (247)
T 3rwb_A            1 TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDI-NAEGAKAA--AASI---GKKARAIAADISDPGSVKALFAEI   74 (247)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHH--HHHH---CTTEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHh---CCceEEEEcCCCCHHHHHHHHHHH
Confidence            55567789999999999999999999999999999999 65432221  1111   2478999999999998888776  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||+||......     .+.++..+++|+.++.+++++    +++.+...++|++||.....+..      
T Consensus        75 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  148 (247)
T 3rwb_A           75 QALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP------  148 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT------
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC------
Confidence                 6899999999765422     455678999999999999888    44444247999999988655332      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....  .......+..
T Consensus       149 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~  204 (247)
T 3rwb_A          149 ----------------------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS--PHNEAFGFVE  204 (247)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--GGGGGHHHHH
T ss_pred             ----------------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccccc--ChhHHHHHHh
Confidence                                  25789999999999888877 3   589999999999977532211  0000000000


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..          ..      ...+...+|+|+++.+++...  ...| ++++.++
T Consensus       205 ~~----------~~------~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          205 ML----------QA------MKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             HH----------SS------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cc----------cc------cCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            00          00      344678999999999998753  2456 6777665

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.90  E-value=4.9e-23  Score=178.85  Aligned_cols=223  Identities=15%  Similarity=0.122  Sum_probs=159.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +.........  .+......+.++.+|++|++++.++++      
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~--~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAAR-TVERLEDVAK--QVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC-CHHHHHHHHH--HHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999999999 7644322211  111223578999999999998887775      


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       ++|++||+||.....      ..+.++..+++|+.++.++++++...-  +-.++|++||.....+..           
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  155 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA-----------  155 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT-----------
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC-----------
Confidence             689999999875321      145567889999999999998875431  026999999987554322           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCc-------hhhhh
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPV-------SVIGG  218 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~-------~~~~~  218 (341)
                                       ....|+.||...+.+.+.++ +   .|+++..++||.|+++.....  ...       ....+
T Consensus       156 -----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~  216 (264)
T 3ucx_A          156 -----------------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSY--FEHQAGKYGTSVEDI  216 (264)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHH--HHHHHHHTTCCHHHH
T ss_pred             -----------------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHH--HHhhhhhcCCCHHHH
Confidence                             24789999999999999887 4   589999999999988632111  000       00011


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ...+...             .....+.+++|+|+++++++...  ...| ++++.++.
T Consensus       217 ~~~~~~~-------------~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  261 (264)
T 3ucx_A          217 YNAAAAG-------------SDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGE  261 (264)
T ss_dssp             HHHHHTT-------------SSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHhcc-------------CCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            1111111             11556889999999999998653  3456 77887654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=4.9e-23  Score=179.19  Aligned_cols=230  Identities=16%  Similarity=0.122  Sum_probs=153.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +....... ..+... ....++.++.+|++|++++.++++     
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW-NLEAGVQCKAALHEQ-FEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHTTT-SCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhh-cCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 75432211 112111 012368899999999988887775     


Q ss_pred             --CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHH----HHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIA----SFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~----~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                        ++|++||+||....   +.++..+++|+.++..+.    ..+++.+  ...++|++||..++.+..            
T Consensus        84 ~g~id~lv~~Ag~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  148 (267)
T 2gdz_A           84 FGRLDILVNNAGVNNE---KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA------------  148 (267)
T ss_dssp             HSCCCEEEECCCCCCS---SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------------
T ss_pred             cCCCCEEEECCCCCCh---hhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC------------
Confidence              47999999997643   336688999998665554    4444432  147999999987544211            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhh------ccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSY------GSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~------~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                      ....|+.||...+.+.+.+      ...|+++.+++||.+.++.....   ..  .........
T Consensus       149 ----------------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~--~~~~~~~~~  207 (267)
T 2gdz_A          149 ----------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESI---EK--EENMGQYIE  207 (267)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGG---GC--HHHHGGGGG
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcc---cc--ccccchhhh
Confidence                            2468999999999988864      24589999999999977631110   00  000000000


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEeccc-cCHHH
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVF-VSSAE  278 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~-~s~~e  278 (341)
                      ........      .....+++++|+|++++.++......| ++++.++. +++.|
T Consensus       208 ~~~~~~~~------~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~  257 (267)
T 2gdz_A          208 YKDHIKDM------IKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD  257 (267)
T ss_dssp             GHHHHHHH------HHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred             HHHHHHHH------hccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence            00000000      003357899999999999998766666 88888743 55543

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.90  E-value=7.2e-23  Score=178.20  Aligned_cols=217  Identities=14%  Similarity=0.116  Sum_probs=158.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +........ .+..   ....+.++.+|++|++++.++++     
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTAT-TEAGAEGIGAAFKQ---AGLEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHH---HTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999 654432221 1221   12468899999999988887776     


Q ss_pred             --CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||.....     ..+.++..+++|+.++.++++++..    .+ -.++|++||..+..+..         
T Consensus       103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  172 (270)
T 3ftp_A          103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNP---------  172 (270)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCC---------
Confidence              689999999976543     1455678999999999999998753    33 47899999987665332         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.||...+.+.+.++ +   .|+++.+++||.|..+.....      .......+.
T Consensus       173 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------~~~~~~~~~  227 (270)
T 3ftp_A          173 -------------------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL------PQEQQTALK  227 (270)
T ss_dssp             -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS------CHHHHHHHH
T ss_pred             -------------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc------CHHHHHHHH
Confidence                               25789999999998888876 3   489999999999977632111      111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ..       ..      ...+.+++|+|+++.+++...  ...| ++++.++.
T Consensus       228 ~~-------~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  267 (270)
T 3ftp_A          228 TQ-------IP------LGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGM  267 (270)
T ss_dssp             TT-------CT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             hc-------CC------CCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCc
Confidence            11       01      455788999999999988542  3456 77887653

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.90  E-value=2.6e-22  Score=174.71  Aligned_cols=220  Identities=15%  Similarity=0.114  Sum_probs=157.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||+++++.|++.|++|++++| +... ...............+.++.+|++|+++++++++      
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHS-ERND-HVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEEC-SCHH-HHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CchH-HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999885 3322 1111111111223579999999999988887775      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||..+..+..          
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  170 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAF----------  170 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT----------
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCC----------
Confidence             7999999999765422     455678899999999999888743    44 57999999987655322          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.||...+.+.+.++ +   .|+++.+++||.|..+.....      .....    .
T Consensus       171 ------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------~~~~~----~  222 (269)
T 3gk3_A          171 ------------------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV------PQDVL----E  222 (269)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-----------------
T ss_pred             ------------------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh------chhHH----H
Confidence                              25789999999998888876 3   489999999999987754322      11110    0


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      .  .+.....      ...+.+++|+|+++..++....  ..| ++++.++.
T Consensus       223 ~--~~~~~~~------~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          223 A--KILPQIP------VGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGM  266 (269)
T ss_dssp             C--CSGGGCT------TSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTS
T ss_pred             H--HhhhcCC------cCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCE
Confidence            0  0000011      4557789999999999987643  456 78887653

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.90  E-value=3.2e-22  Score=175.16  Aligned_cols=223  Identities=12%  Similarity=0.034  Sum_probs=162.7

Q ss_pred             CCCCCCcEEEEecCcch--HHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEGF--VGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |...++++||||||+|+  ||+++++.|+++|++|++++| +. .....+.+...   ...+.++.+|+++++++.++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r-~~-~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYV-GQ-FKDRVEKLCAE---FNPAAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEEC-TT-CHHHHHHHHGG---GCCSEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeC-ch-HHHHHHHHHHh---cCCceEEEeecCCHHHHHHHHH
Confidence            55556789999999988  999999999999999999999 76 22344444332   1358899999999988887775


Q ss_pred             -------CCCEEEEeccCCcc----------ccchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCC
Q 019415           79 -------GCDFVFHVATPLQH----------IDGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKE  139 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~  139 (341)
                             ++|++||+||....          ...+.++..+++|+.++.++++++...-  +..++|++||..+..+.. 
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-  174 (280)
T 3nrc_A           96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMP-  174 (280)
T ss_dssp             HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCT-
T ss_pred             HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCC-
Confidence                   57999999998653          2245567889999999999999986541  147999999987554321 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchh
Q 019415          140 DGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSV  215 (341)
Q Consensus       140 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~  215 (341)
                                                 ....|+.||...+.+.+.++ +   .|+++.+++||.|..+.....   .. .
T Consensus       175 ---------------------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~-~  223 (280)
T 3nrc_A          175 ---------------------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGI---SN-F  223 (280)
T ss_dssp             ---------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGC---TT-H
T ss_pred             ---------------------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcC---cc-h
Confidence                                       25789999999999998876 3   489999999999988754332   11 1


Q ss_pred             hhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          216 IGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ...........       .      ...+..++|+|++++.++...  ...| ++++.++.
T Consensus       224 ~~~~~~~~~~~-------p------~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~  271 (280)
T 3nrc_A          224 KKMLDYNAMVS-------P------LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGY  271 (280)
T ss_dssp             HHHHHHHHHHS-------T------TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhcC-------C------CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCc
Confidence            11211111110       0      344778999999999998753  2456 77887653

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.90  E-value=1.3e-22  Score=179.44  Aligned_cols=213  Identities=16%  Similarity=0.063  Sum_probs=149.4

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++++||||||+|+||+++++.|+++|++|++++| +....... +.+..   ....+.++.+|++|++++.++++    
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDV-DQPALEQAVNGLRG---QGFDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999 76443222 12222   23478999999999998888775    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++.++++++..    .+...++|++||..++.+..        
T Consensus       105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  176 (301)
T 3tjr_A          105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA--------  176 (301)
T ss_dssp             HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT--------
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC--------
Confidence               7899999999764321     455678999999999999998743    22136999999988655322        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh--
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC--  220 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~--  220 (341)
                                          ....|+.||...+.+.+.++ +   .|+++.+++||.|..+.....       .....  
T Consensus       177 --------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~  229 (301)
T 3tjr_A          177 --------------------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNS-------ERIRGAD  229 (301)
T ss_dssp             --------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHH-------HHHC---
T ss_pred             --------------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccccc-------ccccchh
Confidence                                25789999999999888876 3   489999999999976521110       00000  


Q ss_pred             -hHhcC-ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          221 -QLTNN-EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       221 -~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                       ..... ...+.....      ...+++++|+|++++.+++++
T Consensus       230 ~~~~~~~~~~~~~~~~------~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          230 YGMSATPEGAFGPLPT------QDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             -------------------------CCCHHHHHHHHHHHHHHT
T ss_pred             hccccChhhhcccccc------ccCCCCHHHHHHHHHHHHhcC
Confidence             00000 011111111      557899999999999999864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.90  E-value=3.4e-22  Score=173.13  Aligned_cols=228  Identities=13%  Similarity=0.072  Sum_probs=154.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|+||||||+|+||+++++.|++.|++|++++| +... .... +.+...  ....+.++.+|++|++++.++++    
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~   79 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGF-GDAAEIEKVRAGLAAQ--HGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECC-SCHHHHHHHHHHHHHH--HTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeC-CcchHHHHHHHHHHhc--cCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999999 7543 1211 111110  02368899999999998888775    


Q ss_pred             ---CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||.....     ..+.++..+++|+.++.++++++.    +.+ ..+||++||..++.+..        
T Consensus        80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  150 (260)
T 1x1t_A           80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASA--------  150 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCC--------
Confidence               699999999975432     145567899999999999988874    344 58999999987554321        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          +...|+.||...+.+.+.++ +   .|+++.+++||.+.++.....  .+......-...
T Consensus       151 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~  208 (260)
T 1x1t_A          151 --------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ--ISALAEKNGVDQ  208 (260)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------
T ss_pred             --------------------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh--hhhhccccCCch
Confidence                                24789999999999998876 3   489999999999988753321  000000000000


Q ss_pred             hcCcccc-ccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVY-QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ......+ ....      ....+.+++|+|+++.+++...  ...| ++++.++
T Consensus       209 ~~~~~~~~~~~~------p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          209 ETAARELLSEKQ------PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             ------CHHHHC------TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhhccC------CCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            0000000 0000      1445889999999999998643  2456 6777665

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.90  E-value=1e-21  Score=170.78  Aligned_cols=225  Identities=8%  Similarity=0.019  Sum_probs=163.7

Q ss_pred             CC-CCCCcEEEEecCcch--HHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh
Q 019415            1 MD-HKSNFKVCVTGGEGF--VGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         1 M~-~~~~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      |+ ..+++++|||||+|+  ||+++++.|++.|++|++++| +.........+..... ...+.++.+|++|++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYA-GERLEKSVHELAGTLD-RNDSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHTSS-SCCCEEEECCCSSSHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecC-chHHHHHHHHHHHhcC-CCCceEEeCCCCCHHHHHHHH
Confidence            55 335789999999999  999999999999999999999 7554444444433211 137899999999998888777


Q ss_pred             c-------CCCEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCC
Q 019415           78 Q-------GCDFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKED  140 (341)
Q Consensus        78 ~-------~~d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~  140 (341)
                      +       ++|++||+|+....         ...+.++..+++|+.++.++++++...- .-.++|++||.....+..  
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--  156 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMP--  156 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT--
T ss_pred             HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCC--
Confidence            5       68999999997641         1144556889999999999999987763 125899999987654322  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          141 GSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       141 ~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                                ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....   .. ..
T Consensus       157 --------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~-~~  206 (266)
T 3oig_A          157 --------------------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI---SD-FN  206 (266)
T ss_dssp             --------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC---TT-HH
T ss_pred             --------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc---cc-hH
Confidence                                      25789999999999998887 3   489999999999988644332   11 11


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .....+....       .      ...+.+.+|+|+++..++...  ...| ++++.++
T Consensus       207 ~~~~~~~~~~-------~------~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG  252 (266)
T 3oig_A          207 SILKDIEERA-------P------LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG  252 (266)
T ss_dssp             HHHHHHHHHS-------T------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhcC-------C------CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence            1222211110       0      345778999999999999753  2456 6777665

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.90  E-value=2.8e-22  Score=174.66  Aligned_cols=210  Identities=17%  Similarity=0.177  Sum_probs=144.3

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|+||+++++.|+++|++|++++| +.......  ...+   ...+.++.+|++|++++.++++  
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~--~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGR-RLDALQET--AAEI---GDDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHH---TSCCEEEECCTTSHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHH--HHHh---CCCeEEEEecCCCHHHHHHHHHHH
Confidence            33345678999999999999999999999999999999 65432211  1111   1478899999999998888876  


Q ss_pred             -----CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhc----C-CcCEEEEecccccccCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKS----G-TVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                           ++|++||+||.....      ..+.++..+++|+.++.++++++...    + .-.++|++||..+..+..    
T Consensus        97 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~----  172 (272)
T 4dyv_A           97 VEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP----  172 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT----
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC----
Confidence                 799999999975431      14556789999999988888876543    1 025999999987554321    


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                              ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....      ....
T Consensus       173 ------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------~~~~  222 (272)
T 4dyv_A          173 ------------------------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKM------KAGV  222 (272)
T ss_dssp             ------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------
T ss_pred             ------------------------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhh------cccc
Confidence                                    25789999999999998887 3   489999999999987643221      0000


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCC
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMS  264 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~  264 (341)
                          ...   ... ..      ...+.+++|+|+++++++..+...
T Consensus       223 ----~~~---~~~-~~------~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          223 ----PQA---DLS-IK------VEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             ---------------------------CHHHHHHHHHHHHHSCTTS
T ss_pred             ----hhh---hhc-cc------ccCCCCHHHHHHHHHHHhCCCCcC
Confidence                000   000 00      344789999999999999876543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.90  E-value=1.5e-22  Score=176.47  Aligned_cols=227  Identities=13%  Similarity=0.051  Sum_probs=162.4

Q ss_pred             CCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|+||||||+  |+||+++++.|+++|++|++++| +.......+.+....   ..+.++.+|++|++++.++++    
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYV-GDRFKDRITEFAAEF---GSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEec-chhhHHHHHHHHHHc---CCcEEEECCCCCHHHHHHHHHHHHH
Confidence            56899999999  99999999999999999999999 754444444443321   258899999999998888876    


Q ss_pred             ---CCCEEEEeccCCcc----------ccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQH----------IDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~----------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                         ++|++||+||....          ...+.++..+++|+.++.++++++...- ...++|++||..+..+..      
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------  162 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP------  162 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC------
Confidence               57999999997653          2245567899999999999999987652 125899999987654322      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.||...+.+.+.++ +   .|+++.+++||.|..+.....    .....+..
T Consensus       163 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~----~~~~~~~~  216 (271)
T 3ek2_A          163 ----------------------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI----KSFGKILD  216 (271)
T ss_dssp             ----------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC----HHHHHHHH
T ss_pred             ----------------------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc----cchHHHHH
Confidence                                  24789999999999998887 3   489999999999988654332    01112222


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc-cCHHHHH
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF-VSSAEIA  280 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~-~s~~e~~  280 (341)
                      .+....       .      ...+..++|+|+++.+++...  ...| ++++.++. +++.+++
T Consensus       217 ~~~~~~-------~------~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          217 FVESNS-------P------LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             HHHHHS-------T------TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             HHHhcC-------C------cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence            211110       0      345778999999999998752  3456 77887754 5554443

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.90  E-value=7.5e-22  Score=171.72  Aligned_cols=214  Identities=15%  Similarity=0.141  Sum_probs=155.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +....            .....++.+|++|++++.++++      
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSL-DEKSD------------VNVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CC--C------------TTSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-Cchhc------------cCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            5689999999999999999999999999999999 65431            1256789999999998888775      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||..++.+..          
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  148 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATK----------  148 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCC----------
Confidence             7899999999765432     445678899999999999888654    44 57999999988655322          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCC-----CCCCchhhhhHh
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPY-----SSTPVSVIGGLC  220 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~-----~~~~~~~~~~~~  220 (341)
                                        ....|+.||...+.+.+.++ +.  ++++..++||.|.++.....     ............
T Consensus       149 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  210 (269)
T 3vtz_A          149 ------------------NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIE  210 (269)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHH
T ss_pred             ------------------CChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHH
Confidence                              25789999999999999987 43  89999999999987631100     000000011111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      .+       ..      ......+.+++|+|+++.+++...  ...| ++++.++.
T Consensus       211 ~~-------~~------~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          211 EW-------GR------QHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             HH-------HH------HSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HH-------Hh------cCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence            11       01      111556889999999999998753  2456 77887663

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.90  E-value=1.3e-21  Score=170.26  Aligned_cols=218  Identities=17%  Similarity=0.116  Sum_probs=157.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhH-hhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDL-LKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +...  ..+. ...+......+.++.+|++|+++++++++     
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~-~~~~--~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYV-NAAE--RAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CCHH--HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999877 5422  1111 11111223578999999999998888776     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++...- ...++|++||.....+..            
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~------------  174 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPW------------  174 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCS------------
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCC------------
Confidence              7899999999765432     45567899999999999999987651 146999999975333110            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                     .....|+.||...+.+.+.++ +   .|+++..++||.|.++.....   +.....+.    ...
T Consensus       175 ---------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~----~~~  232 (271)
T 3v2g_A          175 ---------------PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD---GDHAEAQR----ERI  232 (271)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS---CSSHHHHH----HTC
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc---chhHHHHH----hcC
Confidence                           125789999999999988887 3   489999999999988754332   11111111    110


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                         .          ...+...+|+|+++.+++...  ...| ++++.++
T Consensus       233 ---~----------~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          233 ---A----------TGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG  268 (271)
T ss_dssp             ---T----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---C----------CCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence               0          334678999999999988643  3456 6777654

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.90  E-value=3.7e-22  Score=173.31  Aligned_cols=214  Identities=14%  Similarity=0.092  Sum_probs=153.8

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ..++++||||||+|+||+++++.|+++|++|++++| +....             .....+.+|+++.+.+.++++    
T Consensus        25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~-------------~~~~~~~~Dv~~~~~~~~~~~~~~~   90 (266)
T 3uxy_A           25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADR-AVAGI-------------AADLHLPGDLREAAYADGLPGAVAA   90 (266)
T ss_dssp             -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSS-CCTTS-------------CCSEECCCCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHH-------------HhhhccCcCCCCHHHHHHHHHHHHH
Confidence            345689999999999999999999999999999998 65430             122456899999887776654    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||..++.+..        
T Consensus        91 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------  161 (266)
T 3uxy_A           91 GLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGP--------  161 (266)
T ss_dssp             HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCT--------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCC--------
Confidence               6999999999865422     4556788999999999999998    4555 68999999987554321        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCC-CCchhhhhHhh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSS-TPVSVIGGLCQ  221 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~-~~~~~~~~~~~  221 (341)
                                          ....|+.||...+.+.+.++ +   .|+++.+++||.|.++....... ...........
T Consensus       162 --------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  221 (266)
T 3uxy_A          162 --------------------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAE  221 (266)
T ss_dssp             --------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHH
T ss_pred             --------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHH
Confidence                                25789999999999998887 3   38999999999998763111000 00000000011


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      +...             .....+.+++|+|+++++++....  ..| ++++.++
T Consensus       222 ~~~~-------------~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3uxy_A          222 LGRT-------------VPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG  262 (266)
T ss_dssp             HHTT-------------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhc-------------CCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence            1110             114568899999999999987542  346 7788765

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.90  E-value=2.7e-22  Score=173.63  Aligned_cols=227  Identities=17%  Similarity=0.159  Sum_probs=156.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +|++|||||+|+||+++++.|++.|++|++++| +.......+....+......+.++.+|+++++++.++++       
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADL-PQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-GGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999 654310111111221223478999999999998887776       


Q ss_pred             CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCc-CEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTV-KRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~-~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      ++|++||+||.....     ..+.++..+++|+.++.++++++...    + . .++|++||..++.+..          
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------  149 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGFP----------  149 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCCT----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCCC----------
Confidence            799999999976432     14556789999999999998887653    4 5 7999999987544321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.||...+.+.+.++ +   .|+++.+++||.+..+....      ....+.. ...
T Consensus       150 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~------~~~~~~~-~~~  204 (258)
T 3a28_C          150 ------------------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ------IDAELSK-ING  204 (258)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH------HHHHHHH-HHC
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhh------hhhhhcc-ccC
Confidence                              24789999999999998876 3   48999999999996652110      0000000 000


Q ss_pred             C--ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 N--EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~--~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .  ......   .........+.+++|+|+++.+++...  ...| .+++.++
T Consensus       205 ~~~~~~~~~---~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          205 KPIGENFKE---YSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             CCTTHHHHH---HHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             CchHHHHHH---HHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence            0  000000   000000334789999999999998653  2456 6677655

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.90  E-value=1e-22  Score=181.83  Aligned_cols=236  Identities=15%  Similarity=0.060  Sum_probs=167.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC-------CchhhhhH-hhhCCCCCCceEEEecCCCChHH
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL-------EDKSKVDL-LKSLPGAETRLIFFEAEIYDPDT   72 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~   72 (341)
                      |...++++||||||+|+||+++++.|++.|++|++++| +.       ......+. ...+......+.++.+|++|+++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDI-GVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQ  100 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-CBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-cccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHH
Confidence            44445689999999999999999999999999999988 61       00111111 11111223478899999999998


Q ss_pred             HHHHhc-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcCC---------cCEEEEeccc
Q 019415           73 FENAIQ-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSGT---------VKRLIYTASV  131 (341)
Q Consensus        73 ~~~~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~~---------~~~~I~~Ss~  131 (341)
                      +.++++       ++|++||+||......     .+.++..+++|+.++.++++++...-.         -.+||++||.
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            887776       7899999999865431     455678999999999999998754320         1499999998


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCC
Q 019415          132 LCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLP  207 (341)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~  207 (341)
                      .+..+..                            ....|+.||...+.+.+.++ +   .|+++..++|| +..+....
T Consensus       181 ~~~~~~~----------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~  231 (322)
T 3qlj_A          181 AGLQGSV----------------------------GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET  231 (322)
T ss_dssp             HHHHCBT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC
T ss_pred             HHccCCC----------------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchh
Confidence            7655322                            24789999999999998887 4   58999999999 64443221


Q ss_pred             CCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc-----------
Q 019415          208 YSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF-----------  273 (341)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~-----------  273 (341)
                      .  ...    ..          .....      .+.++.++|+|.++++++....  ..| .+++.++.           
T Consensus       232 ~--~~~----~~----------~~~~~------~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~  289 (322)
T 3qlj_A          232 V--FAE----MM----------ATQDQ------DFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGP  289 (322)
T ss_dssp             S--CCC----------------------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEE
T ss_pred             h--hhh----hh----------hcccc------ccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCccccc
Confidence            1  000    00          00011      4456789999999999986533  345 67776643           


Q ss_pred             -------cCHHHHHHHHHHhCC
Q 019415          274 -------VSSAEIASCLQQNYP  288 (341)
Q Consensus       274 -------~s~~e~~~~i~~~~~  288 (341)
                             +++.|+++.+.+.++
T Consensus       290 ~~~~~~~~~~~el~~~~~~~~~  311 (322)
T 3qlj_A          290 QIDKGARWDPAELGPVVADLLG  311 (322)
T ss_dssp             EEECSSCCCGGGHHHHHHHHHH
T ss_pred             ccCccCCCCHHHHHHHHHHHhh
Confidence                   277999999998874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=3.7e-22  Score=174.80  Aligned_cols=230  Identities=13%  Similarity=0.104  Sum_probs=159.0

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |...+++++|||||+|+||+++++.|++.|++|++++| +....... +.+.........+.++.+|++|+++++++++ 
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (280)
T 1xkq_A            1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGR-SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINS   79 (280)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHH
Confidence            55556789999999999999999999999999999999 76432222 1121111001168899999999988887765 


Q ss_pred             ------CCCEEEEeccCCccc---------cchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHI---------DGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                            ++|++||+||.....         ..+.++..+++|+.++.++++++...-  +-.++|++||..+..+..   
T Consensus        80 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  156 (280)
T 1xkq_A           80 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ---  156 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCC---
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCC---
Confidence                  689999999975421         144567889999999999999886532  017999999987543210   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch---
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS---  214 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~---  214 (341)
                                              .....|+.||...+.+.+.++ +   .|+++.+++||.+.++...... ....   
T Consensus       157 ------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~  211 (280)
T 1xkq_A          157 ------------------------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG-MPDQASQ  211 (280)
T ss_dssp             ------------------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTT-CCHHHHH
T ss_pred             ------------------------CcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccc-ccccccc
Confidence                                    124789999999999998886 3   5899999999999887422110 0000   


Q ss_pred             -hhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC---CCCc-eEEEecc
Q 019415          215 -VIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP---SMSG-RFFCTNV  272 (341)
Q Consensus       215 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~g-~~n~~~~  272 (341)
                       ...+...+...   .    .      ...+.+++|+|++++.++...   ...| .+++.++
T Consensus       212 ~~~~~~~~~~~~---~----p------~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          212 KFYNFMASHKEC---I----P------IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             HHHHHHHHCTTT---C----T------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             chHHHHHHHHcC---C----C------CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence             00011111000   0    0      345889999999999998643   3456 6777665

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.90  E-value=4.1e-22  Score=169.86  Aligned_cols=194  Identities=17%  Similarity=0.136  Sum_probs=137.6

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhh-hCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLK-SLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |+. ++++||||||+|+||+++++.|+++|++|++++| +...   .+.+. .+    .++.++.+|++|++++.++++ 
T Consensus         1 M~~-~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r-~~~~---~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~   71 (234)
T 2ehd_A            1 MEG-MKGAVLITGASRGIGEATARLLHAKGYRVGLMAR-DEKR---LQALAAEL----EGALPLPGDVREEGDWARAVAA   71 (234)
T ss_dssp             ----CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHHS----TTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCC-CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHHh----hhceEEEecCCCHHHHHHHHHH
Confidence            543 4578999999999999999999999999999999 6533   22222 22    267899999999988887765 


Q ss_pred             ------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                            ++|+|||+||.....     ..+.++..+++|+.++.+++++    +++.+ .++||++||..++.+.      
T Consensus        72 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~------  144 (234)
T 2ehd_A           72 MEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPF------  144 (234)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCC------
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCC------
Confidence                  689999999975432     1445678899999999765554    45555 7899999998754321      


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                            .+...|+.+|...+.+.+.++    ..|++++++|||.+..+.....           
T Consensus       145 ----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----------  191 (234)
T 2ehd_A          145 ----------------------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-----------  191 (234)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------
T ss_pred             ----------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-----------
Confidence                                  124789999999998887775    3589999999999866521100           


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                          ..               .+.+++.+|+|+++..++..+.
T Consensus       192 ----~~---------------~~~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          192 ----PG---------------QAWKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             -------------------------CCHHHHHHHHHHHHHSCC
T ss_pred             ----cc---------------ccCCCCHHHHHHHHHHHhCCCc
Confidence                00               0114689999999999997643

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.3e-22  Score=177.18  Aligned_cols=222  Identities=12%  Similarity=0.041  Sum_probs=156.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +........  ..+   ...+.++.+|++|++++.++++      
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADI-DGDAADAAA--TKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEES-SHHHHHHHH--HHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999 654322211  111   2478899999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||..+..+..          
T Consensus       102 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~----------  170 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVG----------  170 (277)
T ss_dssp             SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC----------
Confidence             6899999999765421     455678999999999999888754    44 57899999987554321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.||...+.+.+.++ +   .|+++.+++||.|.++.....      ..........
T Consensus       171 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~------~~~~~~~~~~  226 (277)
T 3gvc_A          171 ------------------GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTA------MAMFDGALGA  226 (277)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH------HTCC------
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHh------hhcchhhHHH
Confidence                              25789999999999998876 3   589999999999987631110      0000000000


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ..........      ...+.+++|+|+++..++...  ...| ++++.++.
T Consensus       227 ~~~~~~~~~~------~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  272 (277)
T 3gvc_A          227 GGARSMIARL------QGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGT  272 (277)
T ss_dssp             CCHHHHHHHH------HSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             Hhhhhhhhcc------ccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcc
Confidence            0000000000      234788999999999998653  3456 77887653

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.90  E-value=2.1e-22  Score=179.30  Aligned_cols=235  Identities=14%  Similarity=0.119  Sum_probs=160.3

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc---------hhhhhHh-hhCCCCCCceEEEecCCCCh
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED---------KSKVDLL-KSLPGAETRLIFFEAEIYDP   70 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~Dl~~~   70 (341)
                      |...+++++|||||+|+||+++++.|++.|++|++++| +...         ....+.. ..+......+.++.+|++|+
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDL-CRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC-CCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEec-ccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            44445689999999999999999999999999999988 5221         1222211 11112235789999999999


Q ss_pred             HHHHHHhc-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccc
Q 019415           71 DTFENAIQ-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCA  134 (341)
Q Consensus        71 ~~~~~~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~  134 (341)
                      +++.++++       ++|++||+||......     .+.++..+++|+.++.++++++..    .+.-.+||++||...+
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            98888775       6899999999765322     455678999999999999888743    2213689999998765


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCC
Q 019415          135 SPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSS  210 (341)
Q Consensus       135 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~  210 (341)
                      .+..                            ....|+.||...+.+.+.++ +   .|+++..++||.|.++.....  
T Consensus       200 ~~~~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--  249 (317)
T 3oec_A          200 RGAP----------------------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE--  249 (317)
T ss_dssp             SCCT----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH--
T ss_pred             CCCC----------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch--
Confidence            5322                            25789999999999999887 4   489999999999988632110  


Q ss_pred             CCchhhhhHhhHhcCc-----cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          211 TPVSVIGGLCQLTNNE-----YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       211 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                        .....+........     ..+.....     ....+++++|+|+++.+++...  ...| ++++.++.
T Consensus       250 --~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~  313 (317)
T 3oec_A          250 --KLLKMFLPHLENPTREDAAELFSQLTL-----LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ  313 (317)
T ss_dssp             --HHHHHHCTTCSSCCHHHHHHHHTTTCS-----SSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             --hhhhhhhhhccccchhHHHHHHhhhcc-----CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence              00000000000000     00000000     0356889999999999988643  2456 77887653

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.90  E-value=1.4e-22  Score=176.20  Aligned_cols=221  Identities=14%  Similarity=0.110  Sum_probs=158.2

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++++||||||+|.||+++++.|+++|++|++++| +....... ..+...  ....++++++|++|++++.++++    
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGR-DVSELDAARRALGEQ--FGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999 76443222 112110  12478999999999988877765    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++.++++++...    +...++|++||...+.+..        
T Consensus        95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  166 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP--------  166 (266)
T ss_dssp             HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC--------
Confidence               7999999999765432     4456788999999999998887543    2135999999988554321        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....  ..  .......+
T Consensus       167 --------------------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~--~~~~~~~~  222 (266)
T 4egf_A          167 --------------------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV--WG--DEAKSAPM  222 (266)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH--TC--SHHHHHHH
T ss_pred             --------------------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh--cc--ChHHHHHH
Confidence                                24789999999999998887 3   489999999999977632111  00  00111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....       .      ...+..++|+|+++++++...  ...| ++++.++
T Consensus       223 ~~~~-------p------~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 4egf_A          223 IARI-------P------LGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGG  262 (266)
T ss_dssp             HTTC-------T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhcC-------C------CCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCC
Confidence            1110       0      445778999999999998753  3456 7777665

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.90  E-value=4.8e-22  Score=173.64  Aligned_cols=223  Identities=13%  Similarity=0.072  Sum_probs=159.6

Q ss_pred             CCCCCCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |...++++||||||+  |+||+++++.|+++|++|++++| +.......+.+....   ..+.++.+|+++++++.++++
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~   76 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYL-NESLEKRVRPIAQEL---NSPYVYELDVSKEEHFKSLYN   76 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEES-STTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc---CCcEEEEcCCCCHHHHHHHHH
Confidence            554567899999999  99999999999999999999999 764322333333211   247889999999988887775


Q ss_pred             -------CCCEEEEeccCCcc--------c-cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCC
Q 019415           79 -------GCDFVFHVATPLQH--------I-DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~--------~-~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                             ++|++||+||....        . ..+.++..+++|+.++.++++++...- .-.++|++||.....+..   
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~---  153 (275)
T 2pd4_A           77 SVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMA---  153 (275)
T ss_dssp             HHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT---
T ss_pred             HHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCC---
Confidence                   68999999997642        1 145567899999999999999998761 025999999987544221   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                               ....|+.||...+.+.+.++ +   .|+++.+++||.|.++.....   .. ...
T Consensus       154 -------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~-~~~  204 (275)
T 2pd4_A          154 -------------------------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI---AD-FRM  204 (275)
T ss_dssp             -------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS---TT-HHH
T ss_pred             -------------------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc---cc-cHH
Confidence                                     24689999999999998886 3   389999999999988743221   00 111


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      +...+....    +         ...+.+.+|+|++++.++...  ...| .+++.++
T Consensus       205 ~~~~~~~~~----p---------~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          205 ILKWNEINA----P---------LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             HHHHHHHHS----T---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhcC----C---------cCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            111111100    0         234678999999999998642  2356 5677655

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.90  E-value=3.6e-22  Score=172.83  Aligned_cols=223  Identities=13%  Similarity=0.072  Sum_probs=153.9

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .+++++|||||+|.||+++++.|+++|++|+++.| +... ........+......+.++.+|++|++++.++++     
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYN-GAAE-GAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-SSCH-HHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CCHH-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999856 4332 1111112222223578999999999998888776     


Q ss_pred             --CCCEEEEeccCCcc-c-----cchhHhHhhhhhhhHHHHHHHHHHhcCCc--CEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH-I-----DGYLYKNVVEACVGAAKKIASFCVKSGTV--KRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~-~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                        ++|++||+||.... .     ..+.++..+++|+.++.++++++...- .  .++|++||........          
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~----------  152 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM-AKGGAIVTFSSQAGRDGGG----------  152 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEECCHHHHHCCS----------
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEcCHHhccCCC----------
Confidence              68999999986522 1     144557899999999999999998763 2  4899999987552111          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       .....|+.||...+.+.+.++ +.  .+++..+.||.|..+.....  .   .+.....+.  
T Consensus       153 -----------------~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~--~---~~~~~~~~~--  208 (259)
T 3edm_A          153 -----------------PGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTF--T---KPEVRERVA--  208 (259)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------
T ss_pred             -----------------CCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccc--c---ChHHHHHHH--
Confidence                             124789999999999999887 43  49999999999977643321  0   011111111  


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecccc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVFV  274 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~~  274 (341)
                           ....      ...+.+++|+|+++.+++....  ..| .+++.++..
T Consensus       209 -----~~~p------~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~  249 (259)
T 3edm_A          209 -----GATS------LKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVL  249 (259)
T ss_dssp             -----------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSS
T ss_pred             -----hcCC------CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcC
Confidence                 0011      4457789999999999986532  356 778877653

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.90  E-value=8.2e-23  Score=177.94  Aligned_cols=219  Identities=11%  Similarity=0.066  Sum_probs=158.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|+||+++++.|++.|++|++++| +....... +.+..   ....+.++.+|++|++++.++++     
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGT-DPSRVAQTVQEFRN---VGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCS-CHHHHHHHHHHHHH---TTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999988 65432222 22222   23478999999999998888876     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++...    + ..++|++||.....+..         
T Consensus       101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~---------  170 (271)
T 4ibo_A          101 GIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARA---------  170 (271)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCT---------
T ss_pred             CCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCC---------
Confidence              6899999999764322     4556789999999999997776543    4 57999999987554322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....  .  ..+.+...+.
T Consensus       171 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~--~~~~~~~~~~  227 (271)
T 4ibo_A          171 -------------------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL--I--DNPEFDAWVK  227 (271)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--H--HCHHHHHHHH
T ss_pred             -------------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc--c--cCHHHHHHHH
Confidence                               25789999999999999887 3   489999999999987632111  0  0001111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ..       ..      ...+..++|+|+++++++...  ...| ++++.++.
T Consensus       228 ~~-------~p------~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~  267 (271)
T 4ibo_A          228 AR-------TP------AKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGM  267 (271)
T ss_dssp             HH-------ST------TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hc-------CC------CCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCe
Confidence            10       00      445778999999999988643  2456 77887653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.90  E-value=3.2e-22  Score=173.01  Aligned_cols=213  Identities=19%  Similarity=0.144  Sum_probs=156.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +...     ....+   ...+.++.+|++|++++.++++      
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~-----~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~g   78 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI-RGED-----VVADL---GDRARFAAADVTDEAAVASALDLAETMG   78 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES-SCHH-----HHHHT---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-chHH-----HHHhc---CCceEEEECCCCCHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999999999 5432     11122   2478999999999998888776      


Q ss_pred             CCCEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhcC-----------CcCEEEEecccccccCCC
Q 019415           79 GCDFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKSG-----------TVKRLIYTASVLCASPLK  138 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-----------~~~~~I~~Ss~~~~~~~~  138 (341)
                      ++|++||+||....         ...+.++..+++|+.++.++++++...-           .-.++|++||..++.+. 
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  157 (257)
T 3tl3_A           79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ-  157 (257)
T ss_dssp             CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH-
T ss_pred             CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC-
Confidence            79999999997542         1245567899999999999999886531           13589999998754421 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch
Q 019415          139 EDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS  214 (341)
Q Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~  214 (341)
                                                 .....|+.||...+.+.+.++ +   .|+++..++||.|..+.....      
T Consensus       158 ---------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------  204 (257)
T 3tl3_A          158 ---------------------------IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL------  204 (257)
T ss_dssp             ---------------------------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---------
T ss_pred             ---------------------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc------
Confidence                                       236789999999998888876 3   489999999999987743322      


Q ss_pred             hhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          215 VIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      .......+....+.            ...+.+++|+|++++.++..+...| ++++.++
T Consensus       205 ~~~~~~~~~~~~~~------------~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tl3_A          205 PEEARASLGKQVPH------------PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGA  251 (257)
T ss_dssp             CHHHHHHHHHTSSS------------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             cHHHHHHHHhcCCC------------CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCC
Confidence            12222222111100            1457889999999999998766777 6677655

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.90  E-value=4.3e-22  Score=171.60  Aligned_cols=206  Identities=14%  Similarity=0.113  Sum_probs=144.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +........ .+..   ....+.++.+|++|++++.++++     
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRR-NGEKLAPLVAEIEA---AGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEES-SGGGGHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999999999 765533222 2222   23478999999999998888876     


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||..+..+..          
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  150 (252)
T 3h7a_A           82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGS----------  150 (252)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCT----------
T ss_pred             CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCC----------
Confidence             6799999999765422     4556788999999999988876    3444 57999999987655322          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceE-EEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEV-VALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~-~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                        ....|+.||...+.+.+.++ +   .|+++ .++.||.|..+.....      .......  
T Consensus       151 ------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~------~~~~~~~--  204 (252)
T 3h7a_A          151 ------------------GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER------REQMFGK--  204 (252)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------
T ss_pred             ------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc------chhhhhh--
Confidence                              25789999999999998887 3   48999 8999999976643221      1111000  


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM  263 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  263 (341)
                           ......      .. +...+|+|++++.++..+..
T Consensus       205 -----~~~~~~------~~-~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          205 -----DALANP------DL-LMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHCCGG
T ss_pred             -----hhhcCC------cc-CCCHHHHHHHHHHHHhCchh
Confidence                 000010      33 88999999999999986543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.89  E-value=6.1e-22  Score=171.72  Aligned_cols=202  Identities=17%  Similarity=0.157  Sum_probs=146.5

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |...++++||||||+|+||+++++.|++.|++|++++| +....... +.+..   ....+.++.+|+++++++.++++ 
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~   99 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTAR-DVEKLRAVEREIVA---AGGEAESHACDLSHSDAIAAFATG   99 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHH---hCCceeEEEecCCCHHHHHHHHHH
Confidence            44455689999999999999999999999999999999 76443222 12222   23478999999999998887765 


Q ss_pred             ------CCCEEEEeccCCcc------ccchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQH------IDGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                            ++|+|||+||....      ...+.++..+++|+.++.++++++..    .+ ..+||++||..+..+.     
T Consensus       100 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  173 (262)
T 3rkr_A          100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPV-----  173 (262)
T ss_dssp             HHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCC-----
T ss_pred             HHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCC-----
Confidence                  58999999997321      11455678999999999999888643    44 6899999998754422     


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                             .....|+.+|...+.+++.++ +   .|+++.+++||.|..+.....      .   
T Consensus       174 -----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~---  221 (262)
T 3rkr_A          174 -----------------------ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL------S---  221 (262)
T ss_dssp             -----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------
T ss_pred             -----------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc------c---
Confidence                                   125789999999999988876 3   489999999999966532211      0   


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                           ..       ..      ...++..+|+|+++..++....
T Consensus       222 -----~~-------~~------~~~~~~p~dvA~~v~~l~s~~~  247 (262)
T 3rkr_A          222 -----AK-------KS------ALGAIEPDDIADVVALLATQAD  247 (262)
T ss_dssp             -------------------------CCCHHHHHHHHHHHHTCCT
T ss_pred             -----cc-------cc------cccCCCHHHHHHHHHHHhcCcc
Confidence                 00       00      3457789999999999997644

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=2.7e-22  Score=173.90  Aligned_cols=219  Identities=16%  Similarity=0.084  Sum_probs=158.8

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...++|++|||||+|+||+++++.|++.|++|++++| +...   .+.....  ....+.++.+|++|++++.++++  
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r-~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~   74 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDR-EERL---LAEAVAA--LEAEAIAVVADVSDPKAVEAVFAEA   74 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHT--CCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHH--hcCceEEEEcCCCCHHHHHHHHHHH
Confidence            66556789999999999999999999999999999999 6532   2222221  11478899999999988887765  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                           ++|++||+||......     .+.++..+++|+.++.++++++...- +..++|++||..++ +.          
T Consensus        75 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~----------  143 (263)
T 2a4k_A           75 LEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA----------  143 (263)
T ss_dssp             HHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH----------
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CC----------
Confidence                 4799999999754321     44557889999999999999987652 13699999998743 21          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                        .....|+.||...+.+.+.++    ..|+++.+++||.+.++.....      .......+.
T Consensus       144 ------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~  199 (263)
T 2a4k_A          144 ------------------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL------PPWAWEQEV  199 (263)
T ss_dssp             ------------------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS------CHHHHHHHH
T ss_pred             ------------------CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc------CHHHHHHHH
Confidence                              235789999998888888776    3489999999999988743221      111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ...      .       ...+.+.+|+|+++..++...  ...| .+++.++.
T Consensus       200 ~~~------p-------~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  239 (263)
T 2a4k_A          200 GAS------P-------LGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGR  239 (263)
T ss_dssp             HTS------T-------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             hcC------C-------CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence            110      0       234788999999999998753  2456 66776653

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.89  E-value=1.7e-22  Score=174.37  Aligned_cols=215  Identities=18%  Similarity=0.178  Sum_probs=134.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +....... +.+..   ....+.++.+|++|++++.++++     
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADI-NAEAAEAVAKQIVA---DGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 76443222 12222   23478999999999998888776     


Q ss_pred             --CCCEEEEeccCCcc--------ccchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH--------IDGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                        ++|++||+||....        ...+.++..+++|+.++.++.+++    ++.+ ..++|++||..++.         
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~---------  153 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWL---------  153 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccC---------
Confidence              79999999997421        124556789999999966665554    4555 67999999987431         


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            +...|+.||...+.+.+.++ +   .|+++..++||.++++.....  .   ...+..
T Consensus       154 ----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~---~~~~~~  206 (253)
T 3qiv_A          154 ----------------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT--T---PKEMVD  206 (253)
T ss_dssp             ----------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------
T ss_pred             ----------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc--C---cHHHHH
Confidence                                  13579999999999998887 4   389999999999998854332  1   111111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      .+....       .      ...+..++|+|+++..++....  ..| +|++.++.
T Consensus       207 ~~~~~~-------~------~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  249 (253)
T 3qiv_A          207 DIVKGL-------P------LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQ  249 (253)
T ss_dssp             --------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC----
T ss_pred             HHhccC-------C------CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCe
Confidence            111110       0      3346678999999999986533  345 78887654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.89  E-value=4.3e-22  Score=173.92  Aligned_cols=218  Identities=16%  Similarity=0.070  Sum_probs=154.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +.......  ...+... .++.++.+|++|+++++++++      
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~--~~~l~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICAR-DAEACADT--ATRLSAY-GDCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHH--HHHHTTS-SCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHHHhc-CceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999 65432211  1222222 268899999999988887775      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCc----CEEEEecccccccCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTV----KRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~----~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                       ++|++||+||.....     ..+.++..+++|+.++.++++++.    +.+ .    .++|++||..++.+...     
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~~~~-----  177 (276)
T 2b4q_A          104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISAMGE-----  177 (276)
T ss_dssp             SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCCCCC-----
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCCCCC-----
Confidence             689999999975432     145567899999999988877764    334 3    79999999875442211     


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhh-hHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLR-VYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                             .. .|+.||...+.+.+.++ +   .|+++.+++||.+..+....      ......
T Consensus       178 -----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~------~~~~~~  228 (276)
T 2b4q_A          178 -----------------------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH------IANDPQ  228 (276)
T ss_dssp             -----------------------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH------HHHCHH
T ss_pred             -----------------------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh------cchhHH
Confidence                                   23 79999999999998886 3   48999999999997763211      011111


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..+...    .. ..      ...+.+++|+|+++..++...  ...| ++++.++
T Consensus       229 ~~~~~~----~~-~p------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  273 (276)
T 2b4q_A          229 ALEADS----AS-IP------MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG  273 (276)
T ss_dssp             HHHHHH----HT-ST------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhh----cC-CC------CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            111100    00 00      345789999999999998753  2456 6677654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.89  E-value=7e-22  Score=174.03  Aligned_cols=220  Identities=13%  Similarity=0.046  Sum_probs=157.8

Q ss_pred             CCCcEEEEecCcch--HHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            4 KSNFKVCVTGGEGF--VGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      .+++++|||||+|+  ||+++++.|++.|++|++++| +.........+...   ...+.++.+|++|++++.++++   
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQ-GDALKKRVEPLAEE---LGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEEC-SHHHHHHHHHHHHH---HTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCceEEECCCCCHHHHHHHHHHHH
Confidence            45679999999999  999999999999999999999 64332333333221   1368899999999998888775   


Q ss_pred             ----CCCEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                          ++|++||+||....         ...+.++..+++|+.++.++++++...- .-.++|++||..+..+..      
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~------  178 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP------  178 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT------
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC------
Confidence                68999999997641         1145567899999999999999987643 135999999987654322      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....   .. ......
T Consensus       179 ----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~-~~~~~~  232 (293)
T 3grk_A          179 ----------------------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI---GD-FRYILK  232 (293)
T ss_dssp             ----------------------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------CC-HHHHHH
T ss_pred             ----------------------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc---cc-hHHHHH
Confidence                                  24789999999999998887 3   489999999999988743322   11 111111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ......       .      ...+...+|+|+++++++...  ...| ++++.++
T Consensus       233 ~~~~~~-------p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (293)
T 3grk_A          233 WNEYNA-------P------LRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG  274 (293)
T ss_dssp             HHHHHS-------T------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhcC-------C------CCCCCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence            111110       0      344778999999999998753  3456 6777665

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.89  E-value=5.9e-22  Score=171.72  Aligned_cols=220  Identities=15%  Similarity=0.067  Sum_probs=150.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +.........  .+   ...+.++.+|++++++++++++      
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~~~~~--~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDR-DKAGAERVAG--EI---GDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HH---CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHH--Hh---CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999 7543222211  11   2478999999999988887776      


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC-------CcCEEEEecccccccCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG-------TVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-------~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                       ++|++||+||.....      ..+.++..+++|+.++.++++++...-       ...++|++||.....+..      
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------  155 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP------  155 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT------
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC------
Confidence             689999999976521      245567889999999999988875432       124699999987544221      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.+|...+.+.+.++ +   .|+++..++||.+.++.....  .......+..
T Consensus       156 ----------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~  211 (261)
T 3n74_A          156 ----------------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF--MGEDSEEIRK  211 (261)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------
T ss_pred             ----------------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh--cccCcHHHHH
Confidence                                  24789999999999999887 4   489999999999988753322  0000111111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      .       +.....      ...+++++|+|+++..++...  ...| ++++.++.
T Consensus       212 ~-------~~~~~~------~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~  254 (261)
T 3n74_A          212 K-------FRDSIP------MGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGR  254 (261)
T ss_dssp             ------------CT------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             H-------HhhcCC------cCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCc
Confidence            1       111111      456889999999999998643  2456 77887653

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.89  E-value=1.8e-21  Score=169.27  Aligned_cols=224  Identities=13%  Similarity=0.039  Sum_probs=154.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|+||+++++.|++.|++|++++| +....... +.+... .....+.++.+|++|++++.++++     
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV-SSEGLEASKAAVLET-APDAEVLTTVADVSDEAQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH-CTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh-cCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 75432221 112111 002468899999999998888776     


Q ss_pred             --CCCEEEEeccCCcc-c-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH-I-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~-~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        ++|++||+||.... .     ..+.++..+++|+.++..+.+++    ++.+ ..++|++||..+..+..        
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  160 (267)
T 1iy8_A           90 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIG--------  160 (267)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCS--------
T ss_pred             cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCC--------
Confidence              68999999997543 1     14556788999999988665554    4555 68999999987544321        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC--CCCCchhhhhHh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY--SSTPVSVIGGLC  220 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~--~~~~~~~~~~~~  220 (341)
                                          ....|+.+|...+.+.+.++ +   .|+++.+++||.+.++.....  ...+........
T Consensus       161 --------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  220 (267)
T 1iy8_A          161 --------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAE  220 (267)
T ss_dssp             --------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHH
T ss_pred             --------------------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHH
Confidence                                25789999999999988876 3   489999999999987631100  000000000000


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .+...       ..      ...+.+.+|+|+++..++...  ...| .+++.++
T Consensus       221 ~~~~~-------~p------~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          221 EFIQV-------NP------SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  262 (267)
T ss_dssp             HHHTT-------CT------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHhcc-------CC------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            11100       00      345789999999999998653  2456 6677665

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.89  E-value=9.4e-22  Score=171.00  Aligned_cols=229  Identities=12%  Similarity=0.129  Sum_probs=157.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc---CC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---GC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   80 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +...... .+.+... .....+.++.+|+++++.+.++++   ++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGR-REENVNETIKEIRAQ-YPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH-CTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh-CCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            4679999999999999999999999999999999 7543222 1222221 112467889999999998888876   78


Q ss_pred             CEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      |++||+||......     .+.++..+++|+.++..+++++    ++.+ ..++|++||..++.+..             
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------------  152 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQ-------------  152 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCT-------------
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCC-------------
Confidence            99999999765432     4456778999999977776665    3445 67999999987554321             


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-----CCCCchhhhhHhhH
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-----SSTPVSVIGGLCQL  222 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-----~~~~~~~~~~~~~~  222 (341)
                                     ....|+.||...+.+.+.++ +   .|+++..++||.+..+.....     ..............
T Consensus       153 ---------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  217 (267)
T 3t4x_A          153 ---------------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRF  217 (267)
T ss_dssp             ---------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHH
T ss_pred             ---------------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHH
Confidence                           25789999999999999887 4   379999999999976521100     00000000011100


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ....   ....      ....+.+++|+|+++.+++...  ...| ++++.++.
T Consensus       218 ~~~~---~~~~------~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  262 (267)
T 3t4x_A          218 MKEN---RPTS------IIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGL  262 (267)
T ss_dssp             HHHH---CTTC------SSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             hhcc---CCcc------cccCccCHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence            0000   0000      0456889999999999988743  3456 77887653

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.89  E-value=2.2e-22  Score=170.32  Aligned_cols=206  Identities=15%  Similarity=0.079  Sum_probs=152.6

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |...+++++|||||+|+||+++++.|++.|++|++++| +..                      +|++|+++++++++  
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~----------------------~D~~~~~~v~~~~~~~   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASR-QTG----------------------LDISDEKSVYHYFETI   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESG-GGT----------------------CCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecC-Ccc----------------------cCCCCHHHHHHHHHHh
Confidence            55556789999999999999999999999999999988 431                      89999998888876  


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                       ++|++||+||.....      ..+.++..+++|+.++.++++++...- +-.++|++||.....+..            
T Consensus        58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------------  125 (223)
T 3uce_A           58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA------------  125 (223)
T ss_dssp             CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT------------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC------------
Confidence             689999999976321      145567889999999999999997753 024899999987544321            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC-CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV  228 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (341)
                                      ....|+.+|...+.+.+.++ +. .+++..++||.+.++.....  .+.....+.......   
T Consensus       126 ----------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~---  184 (223)
T 3uce_A          126 ----------------NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGM--NADDRDAMYQRTQSH---  184 (223)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTS--CHHHHHHHHHHHHHH---
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhc--chhhHHHHHHHHhhc---
Confidence                            25789999999999999988 54 49999999999988754332  111111111111111   


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                          ..      ...+.+++|+|++++.++......| ++++.++
T Consensus       185 ----~~------~~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG  219 (223)
T 3uce_A          185 ----LP------VGKVGEASDIAMAYLFAIQNSYMTGTVIDVDGG  219 (223)
T ss_dssp             ----ST------TCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             ----CC------CCCccCHHHHHHHHHHHccCCCCCCcEEEecCC
Confidence                01      4567889999999999998666667 7788765

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.89  E-value=2e-22  Score=177.81  Aligned_cols=239  Identities=13%  Similarity=0.074  Sum_probs=162.7

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++|++|||||+|+||+++++.|++.|++|++++| +....... ..+.........+.++.+|++|++++.++++    
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  102 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR-NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA  102 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999 75432221 1222211001168899999999998887775    


Q ss_pred             ---CCCEEEEeccCCccc-------cchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI-------DGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||.....       ..+.++..+++|+.++.++++++...-  +-.++|++||..+..+..        
T Consensus       103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~--------  174 (297)
T 1xhl_A          103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH--------  174 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC--------
T ss_pred             hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCC--------
Confidence               689999999965321       145567899999999999998886542  016999999987543210        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch----hhhh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS----VIGG  218 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~----~~~~  218 (341)
                                         .....|+.+|...+.+.+.++ +   .|+++++++||.|.++...... .+..    ....
T Consensus       175 -------------------~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~  234 (297)
T 1xhl_A          175 -------------------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG-LPETASDKLYSF  234 (297)
T ss_dssp             -------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTT-CCHHHHHHHHHH
T ss_pred             -------------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccc-cccccccchHHH
Confidence                               124789999999999998876 3   5899999999999886321110 0000    0001


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC---CCCc-eEEEeccc-cCHHHHHHHHH
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP---SMSG-RFFCTNVF-VSSAEIASCLQ  284 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~g-~~n~~~~~-~s~~e~~~~i~  284 (341)
                      ...+...   .    .      ...+..++|+|+++++++...   ...| .+++.++. +.+.+.+..+.
T Consensus       235 ~~~~~~~---~----p------~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~  292 (297)
T 1xhl_A          235 IGSRKEC---I----P------VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLM  292 (297)
T ss_dssp             HHHCTTT---C----T------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHH
T ss_pred             HHHHHhc---C----C------CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchh
Confidence            1111000   0    0      345789999999999998643   3456 67777653 55555444333

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.89  E-value=8.3e-22  Score=169.78  Aligned_cols=198  Identities=12%  Similarity=0.025  Sum_probs=150.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +...              ..-..+.+|++|++++.++++      
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r-~~~~--------------~~~~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDF-RENP--------------NADHSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCT--------------TSSEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-Cccc--------------ccccceEEEeCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999 6643              122457889999988887775      


Q ss_pred             -CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                       ++|+|||+||.....      ..+.++..+++|+.++.++++++...- .-.++|++||..++.+..            
T Consensus        86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~------------  153 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTS------------  153 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT------------
T ss_pred             CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCC------------
Confidence             469999999964321      145567889999999999999987753 024899999988655322            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                      ....|+.+|...+.+.+.++ +     .++++.+++||.|.++.              ......
T Consensus       154 ----------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~--------------~~~~~~  203 (251)
T 3orf_A          154 ----------------GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT--------------NRKYMS  203 (251)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH--------------HHHHCT
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc--------------hhhhcc
Confidence                            25789999999999999987 5     48999999999986542              111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcC---CCCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK---PSMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~g-~~n~~~~  272 (341)
                      ..       .      ...+++++|+|++++.++..   ....| .+++.++
T Consensus       204 ~~-------~------~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g  242 (251)
T 3orf_A          204 DA-------N------FDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETK  242 (251)
T ss_dssp             TS-------C------GGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred             cc-------c------ccccCCHHHHHHHHHHHhcCccccCCcceEEEEecC
Confidence            10       1      34578899999999999987   34456 6777653

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.89  E-value=2.4e-22  Score=175.05  Aligned_cols=224  Identities=14%  Similarity=0.032  Sum_probs=156.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhH-hhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDL-LKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|++.|++|++++| +...  ..+. ...+.....++.++.+|++|++++.++++     
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYA-NSTK--DAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcC-CCHH--HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999877 5432  1111 11111223578999999999998887775     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEeccccc-ccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLC-ASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~-~~~~~~~~~~~~~~~~  149 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++...- .-.++|++||... ..+.            
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  161 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSV------------  161 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCC------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCC------------
Confidence              6899999999765422     45567899999999999999988764 1249999999762 1111            


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC--CCCCc----hhhhhH
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY--SSTPV----SVIGGL  219 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~--~~~~~----~~~~~~  219 (341)
                                      .....|+.||...+.+.+.++ +   .|+++..++||.+..+.....  ...+.    ......
T Consensus       162 ----------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  225 (270)
T 3is3_A          162 ----------------PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQ  225 (270)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHH
T ss_pred             ----------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHH
Confidence                            125789999999999999887 4   489999999999987642210  00000    000000


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...       ..      ......+.+++|+|+++.+++...  ...| ++++.++
T Consensus       226 ~~~-------~~------~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          226 QMA-------AH------ASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             HHH-------HH------HSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHH-------Hh------cCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence            000       00      011455788999999999998643  2456 6777654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.89  E-value=8.8e-22  Score=170.15  Aligned_cols=223  Identities=16%  Similarity=0.091  Sum_probs=154.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++|||||+|+||+++++.|++.|++|++++| +....... +.+..   ....+.++.+|++|++++.++++      
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADY-NDATAKAVASEINQ---AGGHAVAVKVDVSDRDQVFAAVEQARKTL   77 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999999 75432221 12222   12468899999999998888876      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++...    +...++|++||....++..          
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  147 (256)
T 1geg_A           78 GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP----------  147 (256)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC----------
Confidence             7999999999754321     4456788999999999888877543    2136999999987555321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh-
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT-  223 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~-  223 (341)
                                        ....|+.||...+.+.+.++ +   .|+++.+++||.+.++....      ....+..... 
T Consensus       148 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~~~~~~~~~~  203 (256)
T 1geg_A          148 ------------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE------IDRQVSEAAGK  203 (256)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH------HHHHHHHHHTC
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhh------hhhhccccccC
Confidence                              24789999999999998876 3   48999999999998763110      0000000000 


Q ss_pred             -cCc--cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 -NNE--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 -~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                       ...  ..+.....      ...+.+.+|+|+++..++...  ...| .+++.++
T Consensus       204 ~~~~~~~~~~~~~p------~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          204 PLGYGTAEFAKRIT------LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             CTTHHHHHHHTTCT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ChHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence             000  00000000      345889999999999998653  2356 6677654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.89  E-value=1.7e-21  Score=171.80  Aligned_cols=219  Identities=15%  Similarity=0.044  Sum_probs=160.6

Q ss_pred             CCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      +++++|||||+|  .||+++++.|++.|++|++++| +.........+....   ..+.++++|++|+++++++++    
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYL-SETFKKRVDPLAESL---GVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            467999999998  9999999999999999999999 754433333332211   246899999999998888775    


Q ss_pred             ---CCCEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         ++|++||+||....         ...+.++..+++|+.++.++++++...- .-.++|++||.....+..       
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~-------  177 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVP-------  177 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCT-------
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCC-------
Confidence               68999999997642         1145567899999999999999987753 125999999987554321       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....   .. .......
T Consensus       178 ---------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~-~~~~~~~  232 (296)
T 3k31_A          178 ---------------------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI---SD-FHYILTW  232 (296)
T ss_dssp             ---------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC---HH-HHHHHHH
T ss_pred             ---------------------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc---cc-hHHHHHH
Confidence                                 24789999999999998887 3   489999999999988754332   00 1111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .....    .         ...+...+|+|+++++++...  ...| ++++.++
T Consensus       233 ~~~~~----p---------~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  273 (296)
T 3k31_A          233 NKYNS----P---------LRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG  273 (296)
T ss_dssp             HHHHS----T---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhcC----C---------CCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence            11110    0         344678999999999999752  3456 7777665

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.89  E-value=2.4e-22  Score=175.63  Aligned_cols=221  Identities=12%  Similarity=0.092  Sum_probs=158.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +....... ..+...  ....+.++.+|++|++++.++++     
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASR-SLPRVLTAARKLAGA--TGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-CHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 75432221 122111  12478999999999988887775     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||..+..+...        
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--------  173 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQAL--------  173 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCTT--------
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCC--------
Confidence              6899999999654321     455678999999999999998743    33 479999999876653322        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                          ...|+.||...+.+.+.++ +   .|+++..++||.|.++.....  ... .........
T Consensus       174 --------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~-~~~~~~~~~  230 (277)
T 4fc7_A          174 --------------------QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRR--LGG-PQASLSTKV  230 (277)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHH--HSC-CHHHHHHHH
T ss_pred             --------------------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhh--ccC-CHHHHHHHh
Confidence                                4789999999999998887 3   489999999999987621100  000 011111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ...       .      ...+...+|+|+++.+++...  ...| ++++.++.
T Consensus       231 ~~~-------p------~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~  270 (277)
T 4fc7_A          231 TAS-------P------LQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGA  270 (277)
T ss_dssp             HTS-------T------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred             ccC-------C------CCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCc
Confidence            110       0      445778999999999999743  3456 77776653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=4.8e-22  Score=173.33  Aligned_cols=196  Identities=12%  Similarity=0.051  Sum_probs=148.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +....... +.+..   ....+.++.+|++|++.+.++++     
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI-NKHGLEETAAKCKG---LGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEc-CHHHHHHHHHHHHh---cCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4579999999999999999999999999999999 75432221 11222   12478999999999988887775     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|+|||+||......     .+.++..+++|+.++.++++++.    +.+ ..+||++||..++.+.          
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~----------  174 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV----------  174 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH----------
T ss_pred             CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC----------
Confidence              6899999999765432     34456889999999888777664    445 6899999998754421          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c------CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S------SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~------~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                        .+...|+.+|...|.+++.++ +      .|++++++|||.+.++.....            
T Consensus       175 ------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~------------  224 (272)
T 1yb1_A          175 ------------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP------------  224 (272)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT------------
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc------------
Confidence                              236789999999999998876 4      289999999999987642100            


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                           .      ..      ...+++++|+|++++.++..+.
T Consensus       225 -----~------~~------~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          225 -----S------TS------LGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             -----H------HH------HCCCCCHHHHHHHHHHHHHTTC
T ss_pred             -----c------cc------ccCCCCHHHHHHHHHHHHHcCC
Confidence                 0      00      2347889999999999998643

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.89  E-value=6.2e-22  Score=173.51  Aligned_cols=216  Identities=16%  Similarity=0.135  Sum_probs=156.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|.||+++++.|++.|++|++++| +........  ..+   ...+.++.+|+++++++.++++      
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r-~~~~~~~~~--~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADL-AAEKGKALA--DEL---GNRAEFVSTNVTSEDSVLAAIEAANQLG  102 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHH---CTTEEEEECCTTCHHHHHHHHHHHTTSS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHH--HHh---CCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4578999999999999999999999999999999 654322211  111   2478999999999998888876      


Q ss_pred             CCCEEEEecc-CCccc----------cchhHhHhhhhhhhHHHHHHHHHHhcC---------CcCEEEEecccccccCCC
Q 019415           79 GCDFVFHVAT-PLQHI----------DGYLYKNVVEACVGAAKKIASFCVKSG---------TVKRLIYTASVLCASPLK  138 (341)
Q Consensus        79 ~~d~Vi~~a~-~~~~~----------~~~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~I~~Ss~~~~~~~~  138 (341)
                      ++|++||+|+ .....          ..+.++..+++|+.++.++++++...-         .-.++|++||..++.+..
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  182 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI  182 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC
Confidence            5899999944 32211          133467899999999999998875321         135999999988654321


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch
Q 019415          139 EDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS  214 (341)
Q Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~  214 (341)
                                                  ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....      
T Consensus       183 ----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------  228 (281)
T 3ppi_A          183 ----------------------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV------  228 (281)
T ss_dssp             ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT------
T ss_pred             ----------------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc------
Confidence                                        25789999999998888876 3   489999999999976532211      


Q ss_pred             hhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          215 VIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      .......+....+.            ...+.+++|+|+++..++..+...| ++++.++
T Consensus       229 ~~~~~~~~~~~~~~------------~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG  275 (281)
T 3ppi_A          229 GEEALAKFAANIPF------------PKRLGTPDEFADAAAFLLTNGYINGEVMRLDGA  275 (281)
T ss_dssp             CHHHHHHHHHTCCS------------SSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             cHHHHHHHHhcCCC------------CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECCC
Confidence            11111111111100            2568899999999999998766677 6777665

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.89  E-value=2e-21  Score=166.95  Aligned_cols=211  Identities=15%  Similarity=0.175  Sum_probs=149.5

Q ss_pred             CCC-CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDH-KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~-~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |.. .+++++|||||+|.||+++++.|+++|++|++++| +....... +.+..   ...++.++.+|++|++++.++++
T Consensus         1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~~~~~~~~~~~   76 (247)
T 2jah_A            1 MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAAR-RVEKLRALGDELTA---AGAKVHVLELDVADRQGVDAAVA   76 (247)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHH
Confidence            443 34689999999999999999999999999999999 75432221 11222   12478899999999988887765


Q ss_pred             -------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                             ++|++||+||.....     ..+.++..+++|+.++.++++++...-  +-.++|++||.....+..      
T Consensus        77 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  150 (247)
T 2jah_A           77 STVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVR------  150 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCT------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCC------
Confidence                   689999999975432     144567889999999999998875431  016999999987544221      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.+|...+.+.+.++ +   .|+++.+++||.+..+.....  ..   .....
T Consensus       151 ----------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~---~~~~~  203 (247)
T 2jah_A          151 ----------------------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHI--TH---TATKE  203 (247)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC--CC---HHHHH
T ss_pred             ----------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcc--cc---hhhHH
Confidence                                  24789999999998888776 3   489999999999987642211  00   00000


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      ... .   ..  .       ...++..+|+|+++..++..+
T Consensus       204 ~~~-~---~~--~-------~~~~~~pedvA~~v~~l~s~~  231 (247)
T 2jah_A          204 MYE-Q---RI--S-------QIRKLQAQDIAEAVRYAVTAP  231 (247)
T ss_dssp             HHH-H---HT--T-------TSCCBCHHHHHHHHHHHHHSC
T ss_pred             HHH-h---cc--c-------ccCCCCHHHHHHHHHHHhCCC
Confidence            000 0   00  0       223588999999999999754

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=1e-21  Score=171.02  Aligned_cols=223  Identities=13%  Similarity=0.121  Sum_probs=156.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +...   .+.+ ..+    .++.++.+|++|+++++++++     
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~---~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK-DESG---GRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHHh----cCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 6543   2222 222    247899999999998888775     


Q ss_pred             --CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||.....      ..+.++..+++|+.++.++++++...   + ..++|++||....++...        
T Consensus        80 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~--------  150 (270)
T 1yde_A           80 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQ--------  150 (270)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTT--------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCC--------
Confidence              689999999975421      13446789999999999999988642   2 379999999875553221        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-CCCCchhhhhHhhH
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-SSTPVSVIGGLCQL  222 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-~~~~~~~~~~~~~~  222 (341)
                                          ...|+.+|...+.+.+.++ +   +|+++.++|||.++++..... ...+.....+....
T Consensus       151 --------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  210 (270)
T 1yde_A          151 --------------------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGM  210 (270)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHH
T ss_pred             --------------------CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHh
Confidence                                4689999999999998886 3   589999999999988731110 00000000000000


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC-CCCc-eEEEeccc-cCHHH
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP-SMSG-RFFCTNVF-VSSAE  278 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~g-~~n~~~~~-~s~~e  278 (341)
                      . .       ..      ...+...+|+|+++..++... ...| .+++.++. +.+.+
T Consensus       211 ~-~-------~p------~~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~  255 (270)
T 1yde_A          211 L-A-------QP------LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGC  255 (270)
T ss_dssp             H-T-------ST------TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC--
T ss_pred             h-c-------CC------CCCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCc
Confidence            0 0       00      234678999999999988642 3456 77787653 44433

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=3.2e-21  Score=165.46  Aligned_cols=211  Identities=14%  Similarity=0.018  Sum_probs=154.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||+|+||+++++.|+++|++|++++| +...   .+.+....    ++.++.+|++|+++++++++      
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~---~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDI-EEGP---LREAAEAV----GAHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHTT----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHHc----CCEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 6532   22222211    37889999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++...    + ..++|++||.. .++..          
T Consensus        76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~~----------  143 (245)
T 1uls_A           76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGNL----------  143 (245)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCCC----------
Confidence             4899999999754321     4456788999999999998887543    4 57999999987 55321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+.+.++ +   .|+++.+++||.+..+.....      ..........
T Consensus       144 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~~  199 (245)
T 1uls_A          144 ------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV------PEKVREKAIA  199 (245)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS------CHHHHHHHHH
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc------CHHHHHHHHh
Confidence                              14789999999998888876 3   489999999999977643221      1111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..   +          ...+++.+|+|++++.++...  ...| .+.+.++
T Consensus       200 ~~---p----------~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          200 AT---P----------LGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (245)
T ss_dssp             TC---T----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hC---C----------CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            10   0          233788999999999998753  2356 6667655

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.89  E-value=1.7e-21  Score=169.33  Aligned_cols=217  Identities=16%  Similarity=0.128  Sum_probs=154.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +....... ..+..  .....+.++.+|+++++++.++++     
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR-NLEEASEAAQKLTE--KYGVETMAFRCDVSNYEEVKKLLEAVKEK   96 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHH--hcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 75432221 11101  112368889999999988887775     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccc-cccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVL-CASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~-~~~~~~~~~~~~~~  146 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++.    +.+ ..++|++||.. ...+.         
T Consensus        97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---------  166 (267)
T 1vl8_A           97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTM---------  166 (267)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCS---------
T ss_pred             cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCC---------
Confidence              6899999999765321     34567889999999999988773    344 68999999986 32211         


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchh--hhhHh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSV--IGGLC  220 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~--~~~~~  220 (341)
                                         .....|+.+|...+.+.+.++ +   .|+++.+++||.+..+....      +.  .....
T Consensus       167 -------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~------~~~~~~~~~  221 (267)
T 1vl8_A          167 -------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA------VFSDPEKLD  221 (267)
T ss_dssp             -------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH------HHTCHHHHH
T ss_pred             -------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc------cccChHHHH
Confidence                               124789999999999998876 3   48999999999997763211      00  11111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .+....       .      ...+++.+|+|++++.++...  ...| .+.+.++
T Consensus       222 ~~~~~~-------p------~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          222 YMLKRI-------P------LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             HHHHTC-------T------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhhC-------C------CCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence            111110       0      334788999999999998653  2456 5666554

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.89  E-value=1.3e-21  Score=168.23  Aligned_cols=206  Identities=17%  Similarity=0.115  Sum_probs=148.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +....             ..+..+.+|++|++++.++++      
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-GSGAP-------------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SSCCC-------------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChHHH-------------HHhcCeeccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999 75431             122248899999988887765      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||.....     ..+.++..+++|+.++.++++++..    .+ ..++|++||...+++..          
T Consensus        80 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  148 (247)
T 1uzm_A           80 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIG----------  148 (247)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC---------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCC----------
Confidence             589999999976432     1455678999999999999988753    44 68999999987555321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.||...+.+.+.++ +   .|+++.+++||.+.++.....      ..........
T Consensus       149 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~~  204 (247)
T 1uzm_A          149 ------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL------DERIQQGALQ  204 (247)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS------CHHHHHHHGG
T ss_pred             ------------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc------CHHHHHHHHh
Confidence                              14789999999998888876 3   489999999999976521110      0111111110


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .       ..      ...+++++|+|+++.+++...  ...| .+++.++
T Consensus       205 ~-------~p------~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          205 F-------IP------AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             G-------CT------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-------CC------CCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence            0       00      345789999999999998743  2355 6777665

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.89  E-value=2.2e-21  Score=168.61  Aligned_cols=201  Identities=17%  Similarity=0.186  Sum_probs=151.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC---CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG---YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ++++||||||+|+||+++++.|++.|   ++|++++| +......+..+...   ..++.++.+|+++++++.++++   
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR-NREQAKELEDLAKN---HSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEES-CTTSCHHHHHHHHH---CTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEec-ChhhhHHHHHhhcc---CCceEEEEecCCChHHHHHHHHHHH
Confidence            45789999999999999999999999   99999999 77654433333221   2478999999999998888876   


Q ss_pred             ------CCCEEEEeccCCc-cc-----cchhHhHhhhhhhhHHHHHHHHHHhc----------CC----cCEEEEecccc
Q 019415           79 ------GCDFVFHVATPLQ-HI-----DGYLYKNVVEACVGAAKKIASFCVKS----------GT----VKRLIYTASVL  132 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~-~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~----~~~~I~~Ss~~  132 (341)
                            ++|+|||+||... ..     ..+.++..+++|+.++.++++++...          +.    ..+||++||..
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~  175 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL  175 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred             HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence                  7999999999765 11     14456688999999999999988554          10    26899999987


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC
Q 019415          133 CASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY  208 (341)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~  208 (341)
                      ++.+...                         ..+...|+.+|...|.+++.++ +   .+++++++|||.|..+...  
T Consensus       176 ~~~~~~~-------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--  228 (267)
T 1sny_A          176 GSIQGNT-------------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG--  228 (267)
T ss_dssp             GCSTTCC-------------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC--
T ss_pred             ccccCCC-------------------------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC--
Confidence            5443211                         0124679999999999998876 4   4899999999999665211  


Q ss_pred             CCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceEE
Q 019415          209 SSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRFF  268 (341)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~n  268 (341)
                                                      ...++..+|+|+.++.++....  ..|.|.
T Consensus       229 --------------------------------~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~  258 (267)
T 1sny_A          229 --------------------------------SSAPLDVPTSTGQIVQTISKLGEKQNGGFV  258 (267)
T ss_dssp             --------------------------------TTCSBCHHHHHHHHHHHHHHCCGGGTTCEE
T ss_pred             --------------------------------CCCCCCHHHHHHHHHHHHHhcCcCCCCcEE
Confidence                                            0124568999999999887532  345443

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.89  E-value=2.6e-21  Score=169.17  Aligned_cols=228  Identities=11%  Similarity=0.058  Sum_probs=159.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC----------chhhhhHh-hhCCCCCCceEEEecCCCChHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE----------DKSKVDLL-KSLPGAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~   73 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +..          +....+.. ..+......+.++.+|++|++++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDI-AGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC-CSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEec-cccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5689999999999999999999999999999988 532          22222222 11122235789999999999888


Q ss_pred             HHHhc-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCC
Q 019415           74 ENAIQ-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPL  137 (341)
Q Consensus        74 ~~~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~  137 (341)
                      .++++       ++|++||+||......     .+.++..+++|+.++.++++++..    .+.-.++|++||...+.+.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  168 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ  168 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC
Confidence            87765       5899999999765432     455678999999999999888543    2213689999998855432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCc
Q 019415          138 KEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPV  213 (341)
Q Consensus       138 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~  213 (341)
                      .                            ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....     
T Consensus       169 ~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----  215 (277)
T 3tsc_A          169 P----------------------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD-----  215 (277)
T ss_dssp             S----------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH-----
T ss_pred             C----------------------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch-----
Confidence            2                            24789999999999999887 3   489999999999987643211     


Q ss_pred             hhhhhHhhHhcCc---cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          214 SVIGGLCQLTNNE---YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       214 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      .............   ..+....       ...+.+.+|+|+++++++....  ..| ++++.++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~-------p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          216 MVTAVGQAMETNPQLSHVLTPFL-------PDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             HHHHHHHHHHTCGGGTTTTCCSS-------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhhhhhhcccccHHHHHHhhhcc-------CCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            0111111111111   1111111       2247899999999999986532  456 67776653

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.89  E-value=7.9e-21  Score=166.85  Aligned_cols=234  Identities=15%  Similarity=0.072  Sum_probs=159.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC-------------chhhhhHhh-hCCCCCCceEEEecCCCCh
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE-------------DKSKVDLLK-SLPGAETRLIFFEAEIYDP   70 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~   70 (341)
                      +++++|||||+|.||+++++.|++.|++|++++| +..             .....+.+. .+......+.++.+|++|+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDI-CKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC-CSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEec-cccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            5689999999999999999999999999999998 621             112222221 1222345799999999999


Q ss_pred             HHHHHHhc-------CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEeccccc
Q 019415           71 DTFENAIQ-------GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLC  133 (341)
Q Consensus        71 ~~~~~~~~-------~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~  133 (341)
                      +++.++++       ++|++||+||.....      ..+.++..+++|+.++.++++++...    +.-.++|++||...
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG  168 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence            98888775       699999999975432      14556789999999999999987543    21358999999876


Q ss_pred             ccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCC
Q 019415          134 ASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYS  209 (341)
Q Consensus       134 ~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~  209 (341)
                      +.+..                            ....|+.||...+.+.+.++ +   .|+++..++||.|..+..... 
T Consensus       169 ~~~~~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-  219 (286)
T 3uve_A          169 LKAYP----------------------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNE-  219 (286)
T ss_dssp             TSCCT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSH-
T ss_pred             ccCCC----------------------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccccc-
Confidence            54322                            24789999999999998887 3   589999999999988754321 


Q ss_pred             CCCchhhhhHhhHhcCcc-ccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          210 STPVSVIGGLCQLTNNEY-VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                         .....+......... ............ ...+.+.+|+|+++++++...  ...| ++++.++
T Consensus       220 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  282 (286)
T 3uve_A          220 ---GTFKMFRPDLENPGPDDMAPICQMFHTL-PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG  282 (286)
T ss_dssp             ---HHHHHHCTTSSSCCHHHHHHHHHTTCSS-SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---chhhhccccccccchhhHHHHHHhhhcc-CCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence               000000000000000 000000000000 245789999999999998643  3456 7777665

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.88  E-value=2.1e-21  Score=167.26  Aligned_cols=206  Identities=16%  Similarity=0.125  Sum_probs=149.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +...             ...+.++.+|++|+++++++++      
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~-------------~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYR-SGEP-------------PEGFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SSCC-------------CTTSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChHh-------------hccceEEEecCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999 6543             1237889999999988887775      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||.....     ..+.++..+++|+.++.++++++..    .+ ..++|++||..+..+.           
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----------  153 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGS-----------  153 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCH-----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC-----------
Confidence             479999999975432     1445678999999999999887654    34 5799999998744321           


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .....|+.+|...+.+.+.++ +   .|+++.+++||.+..+.....      .......+..
T Consensus       154 -----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~~~~~~~~  210 (253)
T 2nm0_A          154 -----------------AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL------TDEQRANIVS  210 (253)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------------CHHHHHT
T ss_pred             -----------------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc------CHHHHHHHHh
Confidence                             235789999999999988876 3   489999999999976642211      0001111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..       .      ...+++.+|+|+++..++...  ...| .+.+.++
T Consensus       211 ~~-------p------~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG  248 (253)
T 2nm0_A          211 QV-------P------LGRYARPEEIAATVRFLASDDASYITGAVIPVDGG  248 (253)
T ss_dssp             TC-------T------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cC-------C------CCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCc
Confidence            00       0      334789999999999998753  2356 6666654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.88  E-value=1.1e-21  Score=167.88  Aligned_cols=211  Identities=18%  Similarity=0.175  Sum_probs=150.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +|++|||||+|+||+++++.|+++|++|++++| +...  .   ...+     ++.++.+|+++ +++.++++       
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r-~~~~--~---~~~~-----~~~~~~~D~~~-~~~~~~~~~~~~~~g   69 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASR-NPEE--A---AQSL-----GAVPLPTDLEK-DDPKGLVKRALEALG   69 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCHH--H---HHHH-----TCEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHH--H---HHhh-----CcEEEecCCch-HHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999 7543  1   1111     26789999998 66665543       


Q ss_pred             CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|++||+||.....     ..+.++..+++|+.++.++++++.    +.+ ..++|++||..++.+...          
T Consensus        70 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~----------  138 (239)
T 2ekp_A           70 GLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGP----------  138 (239)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCC----------
Confidence            799999999975432     145567899999999999988874    445 689999999875442210          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                      .+...|+.||...+.+.+.++ +   .|++++++|||.+.++.....   . ..+.+...+...
T Consensus       139 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~  198 (239)
T 2ekp_A          139 ----------------VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL---R-QNPELYEPITAR  198 (239)
T ss_dssp             ----------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH---H-TCHHHHHHHHTT
T ss_pred             ----------------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc---c-cCHHHHHHHHhc
Confidence                            125789999999999998876 3   489999999999987632110   0 001111111111


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .       .      ...+.+.+|+|+++..++...  ...| .+++.++
T Consensus       199 ~-------p------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          199 I-------P------MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             C-------T------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             C-------C------CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence            0       0      334788999999999998643  2356 5666655

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.88  E-value=2e-21  Score=170.47  Aligned_cols=225  Identities=15%  Similarity=0.038  Sum_probs=156.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch-hh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK-SK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      +++++|||||+|+||+++++.|++.|++|++++| +.... .. .+.+..   ....+.++.+|+++++++.++++    
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYA-NSTESAEEVVAAIKK---NGSDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CchHHHHHHHHHHHH---hCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 65321 11 122222   12478899999999988877664    


Q ss_pred             ---CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                         ++|++||+||.....     ..+.++..+++|+.++.++++++...  + ..++|++||.....+..          
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  172 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKAV----------  172 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSSC----------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCCC----------
Confidence               689999999976542     14556789999999999999999876  4 57999999987543211          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-CC-CCc---hhhhhH
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-SS-TPV---SVIGGL  219 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-~~-~~~---~~~~~~  219 (341)
                                       .....|+.||...+.+.+.++ +   .|+++.+++||.+.++..... .. .+.   ......
T Consensus       173 -----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  235 (283)
T 1g0o_A          173 -----------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEV  235 (283)
T ss_dssp             -----------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHH
T ss_pred             -----------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHH
Confidence                             114789999999999998876 3   489999999999987621100 00 000   000000


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..+....     ..      ....+.+.+|+|+++.+++...  ...| ++++.++
T Consensus       236 ~~~~~~~-----~~------p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG  280 (283)
T 1g0o_A          236 DEYAAVQ-----WS------PLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  280 (283)
T ss_dssp             HHHHHHH-----SC------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhhc-----CC------CCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence            1110000     00      0345788999999999998753  2456 6677654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.88  E-value=4e-21  Score=165.90  Aligned_cols=221  Identities=15%  Similarity=0.095  Sum_probs=156.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-----   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----   79 (341)
                      +++++|||||+|.||+++++.|++.|++|+++.+.+.....  +....+......+.++.+|+++.+.++++++.     
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAE--ETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHH--HHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHH--HHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999886550332211  11122212235788999999999877776642     


Q ss_pred             --------CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCC
Q 019415           80 --------CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        80 --------~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                              +|++||+||......     .+.++..+++|+.++.++++++...- ...++|++||.....+..       
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-------  156 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP-------  156 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCT-------
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCC-------
Confidence                    899999999754322     44456889999999999999987651 135899999987554322       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...+.+.+.++ +   .|+++..++||.+..+.....  ...  ..+...
T Consensus       157 ---------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~--~~~~~~  211 (255)
T 3icc_A          157 ---------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL--LSD--PMMKQY  211 (255)
T ss_dssp             ---------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTT--TTS--HHHHHH
T ss_pred             ---------------------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhh--ccc--HHHHHh
Confidence                                 25789999999999998887 3   489999999999988754432  111  111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....       ..      ...+.+++|+|+++..++...  ...| ++++.++
T Consensus       212 ~~~~-------~~------~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          212 ATTI-------SA------FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             HHHT-------ST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             hhcc-------CC------cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence            1111       00      445778999999999988643  3456 7777665

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.88  E-value=2.4e-21  Score=167.06  Aligned_cols=218  Identities=17%  Similarity=0.115  Sum_probs=153.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +.......  ...+   ...+.++.+|++|++++.++++      
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r-~~~~~~~~--~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI-NEAAGQQL--AAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHH--HHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 65432211  1111   2468899999999988887765      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||.....     ..+.++..+++|+.++..+.+++    ++.+  .++|++||..++.+..          
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~----------  146 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIE----------  146 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCC----------
Confidence             479999999976432     14556788999999888776654    3333  7999999987544221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---C--CceEEEEecCceeCCCCCCCCCCCchhhhhHhh-
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---S--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ-  221 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~-  221 (341)
                                        ....|+.||...+.+.+.++ +   .  |++++++|||.++++.....  .+   ...... 
T Consensus       147 ------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~--~~---~~~~~~~  203 (253)
T 1hxh_A          147 ------------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS--LP---KGVSKEM  203 (253)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH--SC---TTCCHHH
T ss_pred             ------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhc--cc---hhhhHHH
Confidence                              25789999999999998886 3   3  89999999999988742110  00   000000 


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      +.....    ...      ...+.+++|+|+++..++...  ...| .+++.++.
T Consensus       204 ~~~~~~----~~p------~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          204 VLHDPK----LNR------AGRAYMPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HBCBTT----TBT------TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             Hhhhhc----cCc------cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            111000    000      345789999999999998753  2346 66776653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.88  E-value=2.7e-21  Score=170.85  Aligned_cols=234  Identities=15%  Similarity=0.140  Sum_probs=158.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC---------chhhhhH-hhhCCCCCCceEEEecCCCChHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE---------DKSKVDL-LKSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      +++++|||||+|.||.++++.|++.|++|++++| +..         +....+. ...+......+.++.+|++|++++.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDV-CKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEEC-CSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEec-ccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            5689999999999999999999999999999998 632         1122221 1112222357899999999999888


Q ss_pred             HHhc-------CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCC
Q 019415           75 NAIQ-------GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPL  137 (341)
Q Consensus        75 ~~~~-------~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~  137 (341)
                      ++++       ++|++||+||.....      ..+.++..+++|+.++.++++++...    +...++|++||.....+.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  185 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA  185 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence            7775       699999999975432      14556789999999999999987543    224799999998755432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCc
Q 019415          138 KEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPV  213 (341)
Q Consensus       138 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~  213 (341)
                      .                            ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....    .
T Consensus       186 ~----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~  233 (299)
T 3t7c_A          186 E----------------------------NIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNE----P  233 (299)
T ss_dssp             T----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH----H
T ss_pred             C----------------------------CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccccc----c
Confidence            2                            24789999999999998887 3   389999999999988754321    0


Q ss_pred             hhhhhHhhHhcCc-cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          214 SVIGGLCQLTNNE-YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       214 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      ....+........ ............. ...+...+|+|+++++++....  ..| ++++.++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  295 (299)
T 3t7c_A          234 TYRMFRPDLENPTVEDFQVASRQMHVL-PIPYVEPADISNAILFLVSDDARYITGVSLPVDGG  295 (299)
T ss_dssp             HHHHHCTTSSSCCHHHHHHHHHHHSSS-SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhhhhhhhccchhhHHHHHhhhhccc-CcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence            0000000000000 0000000000000 2457889999999999986532  456 7777665

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.88  E-value=2.1e-21  Score=167.08  Aligned_cols=209  Identities=16%  Similarity=0.125  Sum_probs=146.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC-ChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY-DPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~d~V   83 (341)
                      ++++||||||+|+||+++++.|++.|++|++++| +..   .   +..+    ..+.++ +|+. +.+.+.+.+.++|++
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~---~---~~~~----~~~~~~-~D~~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR-NEE---L---LKRS----GHRYVV-CDLRKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHH---H---HHHT----CSEEEE-CCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-CHH---H---HHhh----CCeEEE-eeHHHHHHHHHHHhcCCCEE
Confidence            4689999999999999999999999999999999 652   1   2222    256677 9992 223333334489999


Q ss_pred             EEeccCCcccc-----chhHhHhhhhhhhHHHHHHHH----HHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHID-----GYLYKNVVEACVGAAKKIASF----CVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCY  154 (341)
Q Consensus        84 i~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~  154 (341)
                      ||+||......     .+.++..+++|+.++.++.++    +++.+ ..++|++||..++.+..                
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------------  148 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE----------------  148 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCC----------------
Confidence            99999754321     445678899999997766544    45556 68999999988544221                


Q ss_pred             CCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh-hHhcCcccc
Q 019415          155 TPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC-QLTNNEYVY  229 (341)
Q Consensus       155 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~  229 (341)
                                  ....|+.+|...+.+.+.++ +   .|+++++++||.+.++.....      ...... .+...    
T Consensus       149 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~~~~~----  206 (249)
T 1o5i_A          149 ------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKEL------LSEEKKKQVESQ----  206 (249)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH------SCHHHHHHHHTT----
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccccc------chhhHHHHHHhc----
Confidence                        25789999999999988876 3   489999999999988742111      011111 11111    


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                         ..      ...+++++|+|+++..++...  ...| .|++.++.
T Consensus       207 ---~p------~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          207 ---IP------MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             ---ST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ---CC------CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence               00      345889999999999988653  2346 77887653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.88  E-value=1e-21  Score=169.79  Aligned_cols=229  Identities=10%  Similarity=-0.012  Sum_probs=145.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC----CCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG----CDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~d~   82 (341)
                      |+||||||+|+||+++++.|+++|++|++++| +.....             .  .+.+|+++++++.++++.    +|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~~-------------~--~~~~Dl~~~~~v~~~~~~~~~~id~   65 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDI-RDAEVI-------------A--DLSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SSSSEE-------------C--CTTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-Cchhhc-------------c--ccccCCCCHHHHHHHHHHhCCCCCE
Confidence            58999999999999999999999999999999 764310             0  167899999999988864    599


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                      +||+||.....  .+++..+++|+.++.++++++.    +.+ ..++|++||..++.......  .......+.++....
T Consensus        66 lv~~Ag~~~~~--~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~--~~~~~~~~~~~~~~~  140 (257)
T 1fjh_A           66 LVLCAGLGPQT--KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKN--PLALALEAGEEAKAR  140 (257)
T ss_dssp             EEECCCCCTTC--SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGC--TTHHHHHHTCHHHHH
T ss_pred             EEECCCCCCCc--ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccc--hhhhhhcccchhhhh
Confidence            99999976522  2267999999999999998886    344 58999999998653211100  000000000000000


Q ss_pred             C--CCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccc
Q 019415          159 H--PLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTL  232 (341)
Q Consensus       159 ~--~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (341)
                      .  .......+...|+.||...+.+.+.++ +   .|+++++++||.+.++.....  .+   ..........   +.  
T Consensus       141 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~---~~~~~~~~~~---~~--  210 (257)
T 1fjh_A          141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG--LQ---DPRYGESIAK---FV--  210 (257)
T ss_dssp             HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------------CC--
T ss_pred             hhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh--cc---chhHHHHHHh---cc--
Confidence            0  000011246799999999999999887 4   589999999999988743221  00   0000000000   00  


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..      ...+++++|+|++++.++..+  ...| .+++.++
T Consensus       211 ~~------~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          211 PP------MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CS------TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cc------cCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            00      234789999999999998754  3456 6677665

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.88  E-value=4.9e-22  Score=170.50  Aligned_cols=214  Identities=17%  Similarity=0.086  Sum_probs=155.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHH-CCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLD-KGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|++|||||+|+||+++++.|++ .|+.|++..| +...            ....+.++.+|++|++++.++++     
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~-~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   69 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDI-QQSF------------SAENLKFIKADLTKQQDITNVLDIIKNV   69 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEES-SCCC------------CCTTEEEEECCTTCHHHHHHHHHHTTTC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecc-cccc------------ccccceEEecCcCCHHHHHHHHHHHHhC
Confidence            467899999999999999999999 7899999888 5531            12367899999999999998886     


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcCCc--CEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSGTV--KRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      ++|++||+||......     .+.++..+++|+.++.++++++...- .  .++|++||..++.+..             
T Consensus        70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~~-------------  135 (244)
T 4e4y_A           70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL-KVGASIVFNGSDQCFIAKP-------------  135 (244)
T ss_dssp             CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-EEEEEEEEECCGGGTCCCT-------------
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh-ccCcEEEEECCHHHccCCC-------------
Confidence            7899999999754321     45567899999999999999987763 2  3899999987554321             


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc---
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN---  224 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~---  224 (341)
                                     ....|+.||...+.+.+.++ +   .|+++.+++||.|.++.....      ..........   
T Consensus       136 ---------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------~~~~~~~~~~~~~  194 (244)
T 4e4y_A          136 ---------------NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNL------IQKYANNVGISFD  194 (244)
T ss_dssp             ---------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHH------HHHHHHHHTCCHH
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHH------HHhhhhhcCCCHH
Confidence                           25789999999999999887 3   489999999999977631110      1110000000   


Q ss_pred             -CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          225 -NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       225 -~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                       .........      ....+.+++|+|+++++++....  ..| ++++.++
T Consensus       195 ~~~~~~~~~~------p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  240 (244)
T 4e4y_A          195 EAQKQEEKEF------PLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGG  240 (244)
T ss_dssp             HHHHHHHTTS------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhhcC------CCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCC
Confidence             000000000      14568899999999999997532  356 6777654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.88  E-value=3.1e-21  Score=167.57  Aligned_cols=226  Identities=14%  Similarity=0.076  Sum_probs=156.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|++.|++|++++| +....... ..+... .....+.++.+|++|++++.++++     
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCAR-DGERLRAAESALRQR-FPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH-STTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHh-cCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999 76442222 122221 111258999999999988877765     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++..    .+ ..++|++||.....+..         
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  154 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEP---------  154 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCCT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCCC---------
Confidence              6899999999754422     455678999999999999998844    33 46899999987554322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCC---CCc-hhhhhH
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSS---TPV-SVIGGL  219 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~---~~~-~~~~~~  219 (341)
                                         ....|+.||...+.+.+.++ +   .|+++..++||.+..+.......   ... ....+.
T Consensus       155 -------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  215 (265)
T 3lf2_A          155 -------------------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWT  215 (265)
T ss_dssp             -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHH
T ss_pred             -------------------CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHH
Confidence                               25789999999999998887 3   48999999999997752111000   000 000111


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..+.... ..          ....+..++|+|+++.+++...  ...| ++++.++
T Consensus       216 ~~~~~~~-~~----------p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  260 (265)
T 3lf2_A          216 AQLARNK-QI----------PLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGG  260 (265)
T ss_dssp             HHHHHHT-TC----------TTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSS
T ss_pred             HHHhhcc-CC----------CcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCC
Confidence            1111000 00          0445778999999999998743  3456 6677655

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.88  E-value=3e-21  Score=167.66  Aligned_cols=219  Identities=16%  Similarity=0.124  Sum_probs=152.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|++.|++|++..+ +... ......  .+......+.++.+|++++++++++++     
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYA-GKAAAAEEVAG--KIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEES-SCSHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcC-CCHHHHHHHHH--HHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999998755 4332 111111  111123478899999999998888775     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++...- .-.++|++||..+..+..            
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  170 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP------------  170 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC------------
Confidence              6899999999765432     44467889999999999999887642 125899999987554322            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                      ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....  .   .......+... 
T Consensus       171 ----------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~---~~~~~~~~~~~-  228 (267)
T 3u5t_A          171 ----------------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG--K---SDEVRDRFAKL-  228 (267)
T ss_dssp             ----------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC----------------CHHHHHTS-
T ss_pred             ----------------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc--C---CHHHHHHHHhc-
Confidence                            24789999999999999887 4   389999999999977643221  0   01111111111 


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                            ..      ...+..++|+|+++.+++....  ..| ++++.++
T Consensus       229 ------~p------~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          229 ------AP------LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             ------ST------TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             ------CC------CCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence                  01      4457889999999999987543  356 6677655

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.88  E-value=3.9e-21  Score=166.50  Aligned_cols=206  Identities=14%  Similarity=0.103  Sum_probs=146.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|++.|++|++++| +....... ..+..   ....+.++.+|++|++++.++++     
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   78 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGAR-RQARIEAIATEIRD---AGGTALAQVLDVTDRHSVAAFAQAAVDT   78 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3579999999999999999999999999999999 75442222 12222   23478899999999988887765     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++..+++++..    .+ ..++|++||..++.+..         
T Consensus        79 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~---------  148 (264)
T 3tfo_A           79 WGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVP---------  148 (264)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCC---------
Confidence              6899999999765432     455678999999999988887643    44 57999999987654322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC-CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                         ....|+.||...+.+.+.++ +. |+++..++||.|..+.....      ...      ..
T Consensus       149 -------------------~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~------~~~------~~  197 (264)
T 3tfo_A          149 -------------------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTI------THE------ET  197 (264)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------
T ss_pred             -------------------CChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccc------cch------hH
Confidence                               24789999999999999888 54 99999999999977643221      000      00


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM  263 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  263 (341)
                      .......        ...+...+|+|++++.++..+..
T Consensus       198 ~~~~~~~--------~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          198 MAAMDTY--------RAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             ------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHhh--------hccCCCHHHHHHHHHHHhcCCcc
Confidence            0000000        22256899999999999987654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.88  E-value=6e-21  Score=162.73  Aligned_cols=198  Identities=14%  Similarity=0.157  Sum_probs=149.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++++|||||+|+||+++++.|+++|++|++++| +..+.... ..+..  .....+.++.+|++|++++.++++      
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGAR-SVDRLEKIAHELMQ--EQGVEVFYHHLDVSKAESVEEFSKKVLERF   78 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHh--hcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999 76442222 11211  112478999999999999988876      


Q ss_pred             -CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       ++|++||+||.....     ..+.++..+++|+.++.++++++...   + ..++|++||.....+..           
T Consensus        79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~-----------  146 (235)
T 3l77_A           79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIP-----------  146 (235)
T ss_dssp             SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCCT-----------
T ss_pred             CCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccCC-----------
Confidence             689999999976543     24556789999999999999988542   2 36788888876444221           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc--cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG--SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                                       ....|+.+|...+.+.+.+.  ..++++..++||.+..+.....      .        ..  
T Consensus       147 -----------------~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~------~--------~~--  193 (235)
T 3l77_A          147 -----------------YGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSK------P--------GK--  193 (235)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCC------S--------CC--
T ss_pred             -----------------CcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccccc------C--------Cc--
Confidence                             14689999999999999886  3499999999999976543221      0        00  


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                          ..       ...++..+|+|+++..++..+.
T Consensus       194 ----~~-------~~~~~~p~dva~~v~~l~~~~~  217 (235)
T 3l77_A          194 ----PK-------EKGYLKPDEIAEAVRCLLKLPK  217 (235)
T ss_dssp             ----CG-------GGTCBCHHHHHHHHHHHHTSCT
T ss_pred             ----cc-------ccCCCCHHHHHHHHHHHHcCCC
Confidence                00       2246789999999999998765

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.88  E-value=4.3e-21  Score=163.58  Aligned_cols=196  Identities=18%  Similarity=0.085  Sum_probs=144.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      ++++|||||+|+||+++++.|+++|++|++++| +..........  +   ..++.++.+|++|++++.++++       
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r-~~~~~~~~~~~--~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGR-RYQRLQQQELL--L---GNAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHH--H---GGGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHH--h---cCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999 76432222111  1   1268999999999988887765       


Q ss_pred             CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                      ++|++||+||.....     ..+.++..+++|+.++..+++++...-  +-.++|++||..+..+..             
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------  143 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKA-------------  143 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCS-------------
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCC-------------
Confidence            689999999975432     245567899999999999988875431  013999999987555322             


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                                     ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....      .        ..  
T Consensus       144 ---------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------~--------~~--  192 (235)
T 3l6e_A          144 ---------------NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT------D--------HV--  192 (235)
T ss_dssp             ---------------SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------
T ss_pred             ---------------CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc------C--------CC--
Confidence                           25789999999999999887 3   489999999999966532111      0        00  


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM  263 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~  263 (341)
                           .       ...++..+|+|++++.++..+..
T Consensus       193 -----~-------~~~~~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          193 -----D-------PSGFMTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             ----------------CBCHHHHHHHHHHHTCCCSS
T ss_pred             -----C-------CcCCCCHHHHHHHHHHHHhCCCC
Confidence                 0       22478899999999999986543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.88  E-value=1.8e-21  Score=169.84  Aligned_cols=219  Identities=14%  Similarity=0.059  Sum_probs=150.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHH-CCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLD-KGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++++||||||+|+||+++++.|++ .|++|++++| +...... .+.+...   ...+.++.+|+++++++.++++    
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r-~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR-DVTRGQAAVQQLQAE---GLSPRFHQLDIDDLQSIRALRDFLRK   78 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES-SHHHHHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeC-ChHHHHHHHHHHHhc---CCeeEEEECCCCCHHHHHHHHHHHHH
Confidence            458999999999999999999999 9999999999 7543222 1222221   2468899999999998888876    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCC----CCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDG----SAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~----~~~~  145 (341)
                         ++|+|||+||......     .+.++..+++|+.++.++++++.... +..+||++||..++++.....    ....
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~  158 (276)
T 1wma_A           79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR  158 (276)
T ss_dssp             HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcc
Confidence               7999999999764321     24457889999999999999998763 024999999987664311000    0000


Q ss_pred             CCCCCCCCCCCC---------CCCCccCcchhhhHHHhHHHHHHHHHhhc-c-------CCceEEEEecCceeCCCCCCC
Q 019415          146 KDSIDETCYTPP---------DHPLTCHNEYLRVYIESKMKSEKELLSYG-S-------SGLEVVALALGVVAGDTNLPY  208 (341)
Q Consensus       146 ~~~~~E~~~~~~---------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-------~~~~~~vlRp~~v~G~~~~~~  208 (341)
                      ..+++|+++...         ....+....+...|+.||...|.+++.++ +       .|+++.+++||.|.++...  
T Consensus       159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~--  236 (276)
T 1wma_A          159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG--  236 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC--
T ss_pred             ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC--
Confidence            012222210000         00000001124789999999999988876 3       5899999999999765311  


Q ss_pred             CCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          209 SSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                                                      ...+.+++|+|++++.++..+
T Consensus       237 --------------------------------~~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          237 --------------------------------PKATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             --------------------------------TTCSBCHHHHTHHHHHHHSCC
T ss_pred             --------------------------------ccccCChhHhhhhHhhhhcCc
Confidence                                            012578999999999999754

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.88  E-value=5.3e-21  Score=167.78  Aligned_cols=219  Identities=13%  Similarity=0.101  Sum_probs=156.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC---eEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      +++++|||||+|.||+++++.|++.|+   +|++++| +........ .+... .....+.++.+|++|++++.++++  
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r-~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAAR-RLEKLEELKKTIDQE-FPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEES-CHHHHHHHHHHHHHH-CTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEEC-CHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            357899999999999999999999987   9999999 764433221 12111 112478899999999999998886  


Q ss_pred             -----CCCEEEEeccCCcc-c-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQH-I-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~-~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                           ++|++||+||.... .     ..+.++..+++|+.++.++++++    ++.+ ..++|++||..+..+..     
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~-----  183 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYP-----  183 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT-----
T ss_pred             HHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCC-----
Confidence                 58999999997542 1     14556789999999999999988    4445 68999999987554322     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                             ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....  .........
T Consensus       184 -----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~  238 (287)
T 3rku_A          184 -----------------------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVR--YRGNEEQAK  238 (287)
T ss_dssp             -----------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHH--TTTCHHHHH
T ss_pred             -----------------------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccccc--ccCcHHHHH
Confidence                                   24789999999999999887 4   489999999999977621100  000000000


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCC--Cc-eEEEeccc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSM--SG-RFFCTNVF  273 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~g-~~n~~~~~  273 (341)
                      ....                 ....+.++|+|++++.++.....  .| ++++.++.
T Consensus       239 ~~~~-----------------~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~  278 (287)
T 3rku_A          239 NVYK-----------------DTTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQ  278 (287)
T ss_dssp             HHHT-----------------TSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTE
T ss_pred             Hhhc-----------------ccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCC
Confidence            0000                 22345899999999999986543  23 66666554

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.88  E-value=6.6e-21  Score=164.40  Aligned_cols=217  Identities=14%  Similarity=0.134  Sum_probs=153.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++|||||+|.||+++++.|++.|  +.|+++.| +....   +.+...  ....+.++.+|++|++++.++++     
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r-~~~~~---~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR-SEAPL---KKLKEK--YGDRFFYVVGDITEDSVLKQLVNAAVKG   75 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES-CHHHH---HHHHHH--HGGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecC-CHHHH---HHHHHH--hCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999985  78888888 65432   222211  12378999999999998887775     


Q ss_pred             --CCCEEEEeccCCcc-c-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH-I-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~-~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        ++|++||+||.... .     ..+.++..+++|+.++.++++++    ++.+  .++|++||..+..+..        
T Consensus        76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~--------  145 (254)
T 3kzv_A           76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFS--------  145 (254)
T ss_dssp             HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSC--------
T ss_pred             cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCC--------
Confidence              68999999997543 1     14556789999999999999988    4444  7999999987544221        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC-CceEEEEecCceeCCCCCCCCCCCch-----hhhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS-GLEVVALALGVVAGDTNLPYSSTPVS-----VIGGL  219 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-~~~~~vlRp~~v~G~~~~~~~~~~~~-----~~~~~  219 (341)
                                          ....|+.||...+.+.+.++ +. ++++..++||.+..+.....  ....     .....
T Consensus       146 --------------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~  203 (254)
T 3kzv_A          146 --------------------SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNI--RENVGPSSMSAEQL  203 (254)
T ss_dssp             --------------------CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCC--CCCCCTTTSCHHHH
T ss_pred             --------------------CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHh--hcccCccccCHHHH
Confidence                                25789999999999999988 54 99999999999988754432  1100     11111


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC---CCc-eEEEeccc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSG-RFFCTNVF  273 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g-~~n~~~~~  273 (341)
                      ..+...       ..      ...+.+.+|+|+++.+++....   ..| .+++.++.
T Consensus       204 ~~~~~~-------~~------~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          204 KMFRGL-------KE------NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             HHHHHH-------HT------TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             HHHHHH-------Hh------cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            111110       01      4457889999999999887542   456 56665543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.88  E-value=2.8e-21  Score=166.31  Aligned_cols=205  Identities=18%  Similarity=0.134  Sum_probs=146.5

Q ss_pred             CCC-CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDH-KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~-~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |+. .+++++|||||+|.||+++++.|++.|++|++++| +....... +.+.........+.++.+|++|++++.++++
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   79 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIAR-SKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIK   79 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEES-CHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHH
Confidence            552 35689999999999999999999999999999999 76543322 2222211112478899999999988887765


Q ss_pred             -------CCCEEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                             ++|++||+||......    .+.++..+++|+.++..+++++    ++.+ ..++|++||.....+..     
T Consensus        80 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-----  153 (250)
T 3nyw_A           80 DIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFA-----  153 (250)
T ss_dssp             HHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------C-----
T ss_pred             HHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCC-----
Confidence                   6899999999754322    4556789999999999998887    3344 57999999987554221     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                             +...|+.||...+.+.+.++ +   .|+++..++||.+..+..              
T Consensus       154 -----------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~--------------  196 (250)
T 3nyw_A          154 -----------------------DGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA--------------  196 (250)
T ss_dssp             -----------------------CTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH--------------
T ss_pred             -----------------------CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh--------------
Confidence                                   14689999999999988876 3   489999999999955411              


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                      ......   .   .       ...+++.+|+|+++..++..+.
T Consensus       197 ~~~~~~---~---~-------~~~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          197 KKAGTP---F---K-------DEEMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             HHTTCC---S---C-------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             hhcCCC---c---c-------cccCCCHHHHHHHHHHHHcCCC
Confidence            111000   0   0       3347889999999999998654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.88  E-value=4.8e-21  Score=163.47  Aligned_cols=199  Identities=17%  Similarity=0.098  Sum_probs=147.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +|+||||||+|+||+++++.|+++|++|++++| +....            .....++.+|+++++++.++++       
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDL-SANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEES-SCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEec-Ccccc------------ccccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            478999999999999999999999999999999 76431            1245778999999988877765       


Q ss_pred             --CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ++|+|||+||.....      ..+.++..+++|+.++.++++++...- ...++|++||..++.+..           
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  138 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP-----------  138 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------
T ss_pred             CCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC-----------
Confidence              789999999965421      144567889999999999999987642 025999999987554321           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC-----CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS-----GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-----~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                       +...|+.+|...+.+.+.++ +.     |+++.+++||.+.++..          .    ...
T Consensus       139 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~----------~----~~~  187 (236)
T 1ooe_A          139 -----------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN----------R----KWM  187 (236)
T ss_dssp             -----------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH----------H----HHS
T ss_pred             -----------------CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch----------h----hcC
Confidence                             25789999999999999887 43     59999999999976521          1    110


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC---CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP---SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~g-~~n~~~~  272 (341)
                      ...       .      ...++..+|+|+++..++..+   ...| .+.+.++
T Consensus       188 ~~~-------~------~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg  227 (236)
T 1ooe_A          188 PNA-------D------HSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTE  227 (236)
T ss_dssp             TTC-------C------GGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred             CCc-------c------ccccCCHHHHHHHHHHHHcCCCcccccccEEEEecC
Confidence            000       0      223567899999998666322   2345 5666553

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.88  E-value=2.7e-21  Score=164.37  Aligned_cols=195  Identities=13%  Similarity=0.058  Sum_probs=143.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC----CE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC----DF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----d~   82 (341)
                      |+||||||+|.||+++++.|++.|++|++++| +...   .+.+...  ....+.++.+|+++++++.++++..    |+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r-~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~   75 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGR-SESK---LSTVTNC--LSNNVGYRARDLASHQEVEQLFEQLDSIPST   75 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CHHH---HHHHHHT--CSSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHH--HhhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence            57999999999999999999999999999999 6543   2222221  1347889999999999999998754    99


Q ss_pred             EEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYT  155 (341)
Q Consensus        83 Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~  155 (341)
                      +||+||......     .+.++..+++|+.++.++++++...-  +..++|++||..+..+..                 
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------------  138 (230)
T 3guy_A           76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA-----------------  138 (230)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT-----------------
T ss_pred             EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC-----------------
Confidence            999999754322     45567889999999999999886542  123999999987554321                 


Q ss_pred             CCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccccc
Q 019415          156 PPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQT  231 (341)
Q Consensus       156 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (341)
                                 ....|+.||...+.+.+.++ +   .|+++..++||.+..+.....      .        ..      
T Consensus       139 -----------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~--------~~------  187 (230)
T 3guy_A          139 -----------QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETS------G--------KS------  187 (230)
T ss_dssp             -----------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------
T ss_pred             -----------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhc------C--------CC------
Confidence                       25789999999999999887 4   389999999999976532211      0        00      


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                       ..      ...+.+++|+|+++..++..+.
T Consensus       188 -~~------~~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          188 -LD------TSSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             ------------CCCHHHHHHHHHHHCCEET
T ss_pred             -CC------cccCCCHHHHHHHHHHHHhCcC
Confidence             00      4457889999999999987543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.87  E-value=7.9e-22  Score=170.96  Aligned_cols=222  Identities=13%  Similarity=0.123  Sum_probs=154.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| ...+....+.+.. +......+.++.+|++|++++.++++     
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYH-QAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEES-CGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEec-CccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999988 6554344433322 22234579999999999998888776     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ++|++||+||......     .+.++..+++|+.++.++++++...  + ..++|++||.....+...          
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~iv~isS~~~~~~~~~----------  157 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-NGHIITIATSLLAAYTGF----------  157 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEEEEEECCCHHHHHHCC----------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCEEEEEechhhccCCCC----------
Confidence              6899999999764432     4556788999999999999999775  3 469999999875553221          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                        ...|+.||...+.+.+.++ +   .|+++..++||.|..+.....  .   .....      
T Consensus       158 ------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~---~~~~~------  208 (262)
T 3ksu_A          158 ------------------YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQ--E---TKEST------  208 (262)
T ss_dssp             ------------------CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC--C--------------
T ss_pred             ------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--C---chHHH------
Confidence                              3679999999999999887 4   389999999999865421110  0   00000      


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC-CCCc-eEEEecccc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP-SMSG-RFFCTNVFV  274 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~g-~~n~~~~~~  274 (341)
                       ........      ...+...+|+|+++.+++... ...| .+++.++..
T Consensus       209 -~~~~~~~~------~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~  252 (262)
T 3ksu_A          209 -AFHKSQAM------GNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYT  252 (262)
T ss_dssp             --------C------CCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCC
T ss_pred             -HHHHhcCc------ccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCcc
Confidence             00000001      445778999999999998752 2456 677776643

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.87  E-value=2.1e-21  Score=169.41  Aligned_cols=220  Identities=15%  Similarity=0.108  Sum_probs=156.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +....... ..+..   ....+.++.+|+++++++.++++     
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~  107 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGV-KPGSTAAVQQRIIA---SGGTAQELAGDLSEAGAGTDLIERAEAI  107 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-STTTTHHHHHHHHH---TTCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHHHHh---cCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999 76553332 22222   23578999999999988887775     


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||.....+.           
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~-----------  175 (275)
T 4imr_A          108 APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPK-----------  175 (275)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCC-----------
Confidence             6899999999754322     4556788999999999999987    3344 5799999998754421           


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       .....|+.||...+.+.+.++ +   .|+++..++||.+..+.....   ....+........
T Consensus       176 -----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~  235 (275)
T 4imr_A          176 -----------------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR---RAQDPEGWDEYVR  235 (275)
T ss_dssp             -----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHH---HHHCHHHHHHHHH
T ss_pred             -----------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccc---cccChHHHHHHHh
Confidence                             125779999999999998887 3   389999999999976521110   0000001111100


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .   ..   .      ...+...+|+|+++++++...  ...| ++++.++
T Consensus       236 ~---~~---p------~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          236 T---LN---W------MGRAGRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             H---HS---T------TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             h---cC---c------cCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            0   00   0      334677999999999998753  2456 6677654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.87  E-value=1.4e-20  Score=168.35  Aligned_cols=216  Identities=13%  Similarity=0.085  Sum_probs=155.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEe-cCCCCchhhh-hHhhhCCCCCCceEEEecCCCChH-----------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTL-RPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPD-----------   71 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~-----------   71 (341)
                      ++++||||||+|+||+++++.|++.|++|++++ | +....... +.+..  .....+.++.+|+++++           
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r-~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR-SAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCC-------C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHHHh--hcCCeEEEEEeeCCCchhcccccccccc
Confidence            457899999999999999999999999999999 8 65432221 11210  11247899999999988           


Q ss_pred             ------HHHHHhc-------CCCEEEEeccCCcccc-------------------chhHhHhhhhhhhHHHHHHHHHHhc
Q 019415           72 ------TFENAIQ-------GCDFVFHVATPLQHID-------------------GYLYKNVVEACVGAAKKIASFCVKS  119 (341)
Q Consensus        72 ------~~~~~~~-------~~d~Vi~~a~~~~~~~-------------------~~~~~~~~~~nv~~~~~l~~~~~~~  119 (341)
                            ++.++++       ++|++||+||......                   .+.++..+++|+.++.++++++...
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  8887775       7899999999754321                   3345678999999999999887642


Q ss_pred             ---CC------cCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c--
Q 019415          120 ---GT------VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S--  187 (341)
Q Consensus       120 ---~~------~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~--  187 (341)
                         ..      ..+||++||..+..+..                            ....|+.+|...+.+.+.++ +  
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~----------------------------~~~~Y~asKaal~~l~~~la~el~  253 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLL----------------------------GYTIYTMAKGALEGLTRSAALELA  253 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCT----------------------------TCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCC----------------------------CcHHHHHHHHHHHHHHHHHHHHHh
Confidence               11      36999999987544221                            24789999999999998886 3  


Q ss_pred             -CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCC-CcccHHHHHHHHHHhhcCC--CC
Q 019415          188 -SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL-PLVHIDDVCEAHIFCMEKP--SM  263 (341)
Q Consensus       188 -~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~--~~  263 (341)
                       .|+++.+++||.|..+. . .  .    +.....+....+             .. .+...+|+|+++++++...  ..
T Consensus       254 ~~gIrvn~v~PG~v~T~~-~-~--~----~~~~~~~~~~~p-------------~~~r~~~pedvA~~v~~l~s~~~~~i  312 (328)
T 2qhx_A          254 PLQIRVNGVGPGLSVLVD-D-M--P----PAVWEGHRSKVP-------------LYQRDSSAAEVSDVVIFLCSSKAKYI  312 (328)
T ss_dssp             GGTEEEEEEEESSBSCCC-C-S--C----HHHHHHHHTTCT-------------TTTSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             hcCcEEEEEecCcccCCc-c-c--c----HHHHHHHHhhCC-------------CCCCCCCHHHHHHHHHHHhCccccCc
Confidence             48999999999998875 2 1  1    222222211110             22 4678999999999998642  34


Q ss_pred             Cc-eEEEecc
Q 019415          264 SG-RFFCTNV  272 (341)
Q Consensus       264 ~g-~~n~~~~  272 (341)
                      .| ++++.++
T Consensus       313 tG~~i~vdGG  322 (328)
T 2qhx_A          313 TGTCVKVDGG  322 (328)
T ss_dssp             CSCEEEESTT
T ss_pred             cCcEEEECCC
Confidence            56 6677655

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.87  E-value=1.2e-20  Score=162.20  Aligned_cols=211  Identities=16%  Similarity=0.151  Sum_probs=147.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      |++|||||+|+||+++++.|++.|++|++++| +.......  ...+.   ..+.++.+|++|++++.++++       +
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~--~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   74 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGR-RQERLQEL--KDELG---DNLYIAQLDVRNRAAIEEMLASLPAEWCN   74 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHH--HHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999999 65432211  11111   368899999999999998876       5


Q ss_pred             CCEEEEeccCCc-c---c--cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQ-H---I--DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        80 ~d~Vi~~a~~~~-~---~--~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      +|++||+||... .   .  ..+.++..+++|+.++.++++++.    +.+ ..++|++||..+..+..           
T Consensus        75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----------  142 (248)
T 3asu_A           75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYA-----------  142 (248)
T ss_dssp             CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCT-----------
T ss_pred             CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCC-----------
Confidence            899999999752 1   1  145567899999999999988875    444 58999999987544221           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeC-CCCCCCCCCCchhhhhHhhHhc
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAG-DTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G-~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                       ....|+.||...+.+.+.++ +   .|+++.+++||.|.| +.....  ... .....     
T Consensus       143 -----------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~--~~~-~~~~~-----  197 (248)
T 3asu_A          143 -----------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--FKG-DDGKA-----  197 (248)
T ss_dssp             -----------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc--ccC-chHHH-----
Confidence                             24789999999999998876 3   489999999999984 421110  000 00000     


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-CCc-eEEEec
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MSG-RFFCTN  271 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g-~~n~~~  271 (341)
                       ....   .       ...++..+|+|++++.++..+. ..| .+.+.+
T Consensus       198 -~~~~---~-------~~~~~~p~dvA~~v~~l~s~~~~~~g~~i~v~~  235 (248)
T 3asu_A          198 -EKTY---Q-------NTVALTPEDVSEAVWWVSTLPAHVNINTLEMMP  235 (248)
T ss_dssp             ------------------CCBCHHHHHHHHHHHHHSCTTCCCCEEEECC
T ss_pred             -HHHH---h-------ccCCCCHHHHHHHHHHHhcCCccceeeEEEEcc
Confidence             0000   0       2234689999999999987543 334 445544

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.87  E-value=8.9e-21  Score=163.39  Aligned_cols=213  Identities=18%  Similarity=0.154  Sum_probs=152.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCC--CChHHHHHHhc---
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEI--YDPDTFENAIQ---   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~---   78 (341)
                      +++++|||||+|.||+++++.|++.|++|++++| +....... +.+...  ....+.++.+|+  ++++++.++++   
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGR-NEEKLRQVASHINEE--TGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhh--cCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            4579999999999999999999999999999999 75442222 112111  113678999999  88887777765   


Q ss_pred             ----CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                          ++|++||+||.....      ..+.++..+++|+.++.++++++    ++.+ ..++|++||.....+..      
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~------  160 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRA------  160 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCT------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCC------
Confidence                689999999974321      14556789999999999999988    4445 68999999987554322      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                            ....|+.||...+.+.+.++ +.  .+++..+.||.+..+.              ...
T Consensus       161 ----------------------~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~--------------~~~  204 (252)
T 3f1l_A          161 ----------------------NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM--------------RAS  204 (252)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH--------------HHH
T ss_pred             ----------------------CCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch--------------hhh
Confidence                                  24789999999999999887 44  4899999999885431              111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc-cCH
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF-VSS  276 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~-~s~  276 (341)
                      ......             ...+...+|++.++++++....  ..| .+++.++. .++
T Consensus       205 ~~~~~~-------------~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  250 (252)
T 3f1l_A          205 AFPTED-------------PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGI  250 (252)
T ss_dssp             HCTTCC-------------GGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC-----
T ss_pred             hCCccc-------------hhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCC
Confidence            111100             2235678999999999987532  456 77777654 443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.87  E-value=2.4e-21  Score=169.54  Aligned_cols=213  Identities=16%  Similarity=0.141  Sum_probs=149.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|+||+++++.|++.|++|++++| +....... +.+....  ...+.++++|++|++++.++++     
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGR-RPDVLDAAAGEIGGRT--GNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHH--SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhcC--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 76432222 1121111  1235899999999988887765     


Q ss_pred             --CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhc----C-CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKS----G-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                        ++|++||+||.....      ..+.++..+++|+.++.++++++...    + ...++|++||..+..+..       
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~-------  181 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP-------  181 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT-------
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC-------
Confidence              579999999975431      14566789999999988888776543    1 136999999987554321       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.||...+.+.+.++ +   .|+++..++||.|..+.....      ..    .
T Consensus       182 ---------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~------~~----~  230 (281)
T 4dry_A          182 ---------------------NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARM------ST----G  230 (281)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------------C----E
T ss_pred             ---------------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhh------cc----h
Confidence                                 25789999999999998887 3   489999999999976632221      00    0


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEE
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFF  268 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n  268 (341)
                      ....   .....       ...++.++|+|+++++++..+....+.+
T Consensus       231 ~~~~---~~~~~-------~~~~~~pedvA~~v~fL~s~~~~~~i~~  267 (281)
T 4dry_A          231 VLQA---NGEVA-------AEPTIPIEHIAEAVVYMASLPLSANVLT  267 (281)
T ss_dssp             EECT---TSCEE-------ECCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             hhhh---hhccc-------ccCCCCHHHHHHHHHHHhCCCccCcccc
Confidence            0000   00000       2347789999999999998776555443

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.87  E-value=1.6e-20  Score=160.70  Aligned_cols=199  Identities=12%  Similarity=0.005  Sum_probs=148.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|+||||||+|+||+++++.|+++|++|++++| +....            .....++.+|++|++++.++++      
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~------------~~~~~~~~~D~~~~~~v~~~~~~~~~~~   72 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDV-VENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLL   72 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-SCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeC-Chhhc------------cCCcEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999 76431            1245778999999988887765      


Q ss_pred             ---CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                         ++|++||+||.....      ..+.++..+++|+.++.++++++...- .-.++|++||..++.+..          
T Consensus        73 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  142 (241)
T 1dhr_A           73 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP----------  142 (241)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT----------
T ss_pred             CCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC----------
Confidence               689999999975421      134567889999999999999987642 025999999987554321          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                        ....|+.+|...+.+.+.++ +     .|+++.+++||.+-.+.          .    ...
T Consensus       143 ------------------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~----------~----~~~  190 (241)
T 1dhr_A          143 ------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM----------N----RKS  190 (241)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH----------H----HHH
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc----------c----ccc
Confidence                              25789999999999999887 4     26999999999985541          1    111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN  271 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~  271 (341)
                      ....       .      ...++..+|+|+++..++....  ..| .+.+.+
T Consensus       191 ~~~~-------~------~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g  229 (241)
T 1dhr_A          191 MPEA-------D------FSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVT  229 (241)
T ss_dssp             STTS-------C------GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred             Ccch-------h------hccCCCHHHHHHHHHHHhcCCCcCccceEEEEeC
Confidence            0000       0      2235678999999999987543  345 566654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.87  E-value=9.1e-21  Score=164.77  Aligned_cols=219  Identities=13%  Similarity=0.015  Sum_probs=159.1

Q ss_pred             CCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCch--hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            5 SNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLEDK--SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         5 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      ++++||||||+  |.||.++++.|++.|++|++++| +....  ...+.+...  ....+.++.+|++++++++++++  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~-~~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYA-SRAQGAEENVKELEKT--YGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBS-SSSSHHHHHHHHHHHH--HCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeC-CcchhHHHHHHHHHHh--cCCceeEEecCCCCHHHHHHHHHHH
Confidence            46799999999  99999999999999999999988 65542  222333221  12478999999999988887775  


Q ss_pred             -----CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||+||.....     ..+.++..+++|+.++.++++++    ++.+ ..++|++||.....+...     
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~-----  169 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFP-----  169 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSS-----
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCC-----
Confidence                 579999999976543     24556789999999999999987    4445 579999999875543211     


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           .....|+.||...+.+.+.++ +.  .+++..+.||.+..+.....      .......
T Consensus       170 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~------~~~~~~~  222 (267)
T 3gdg_A          170 ---------------------QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV------PKETQQL  222 (267)
T ss_dssp             ---------------------SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS------CHHHHHH
T ss_pred             ---------------------CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC------CHHHHHH
Confidence                                 124789999999999999887 43  38999999999976643221      1111121


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      +...       ..      ...+.+++|+|+++..++...  ...| ++++.++
T Consensus       223 ~~~~-------~~------~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  263 (267)
T 3gdg_A          223 WHSM-------IP------MGRDGLAKELKGAYVYFASDASTYTTGADLLIDGG  263 (267)
T ss_dssp             HHTT-------ST------TSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             HHhc-------CC------CCCCcCHHHHHhHhheeecCccccccCCEEEECCc
Confidence            1111       01      456788999999999998753  2456 6777654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.87  E-value=2.2e-20  Score=164.15  Aligned_cols=216  Identities=16%  Similarity=0.138  Sum_probs=153.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC-Cchhhh-hHhhhCCCCCCceEEEecCCCC----hHHHHHHhc
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL-EDKSKV-DLLKSLPGAETRLIFFEAEIYD----PDTFENAIQ   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~----~~~~~~~~~   78 (341)
                      ++|++|||||+|+||+++++.|++.|++|++++| +. ...... +.+..  .....+.++.+|+++    ++.+.++++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r-~~~~~~~~~~~~l~~--~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYH-NSAEAAVSLADELNK--ERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEES-SCHHHHHHHHHHHHH--HSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeC-CchHHHHHHHHHHHh--hcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            4578999999999999999999999999999999 76 332211 12220  112478899999999    887777765


Q ss_pred             -------CCCEEEEeccCCccc---------------cchhHhHhhhhhhhHHHHHHHHHHhcC---C------cCEEEE
Q 019415           79 -------GCDFVFHVATPLQHI---------------DGYLYKNVVEACVGAAKKIASFCVKSG---T------VKRLIY  127 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~---------------~~~~~~~~~~~nv~~~~~l~~~~~~~~---~------~~~~I~  127 (341)
                             ++|++||+||.....               ..+.++..+++|+.++..+++++...-   .      ..++|+
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~  178 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN  178 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence                   689999999975321               134456789999999999998886542   0      258999


Q ss_pred             ecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       128 ~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                      +||..++.+.                            .....|+.||...+.+.+.++ +   .|+++.+++||.++++
T Consensus       179 isS~~~~~~~----------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~  230 (288)
T 2x9g_A          179 LCDAMVDQPC----------------------------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLP  230 (288)
T ss_dssp             ECCTTTTSCC----------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCC
T ss_pred             EecccccCCC----------------------------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCc
Confidence            9998754421                            124789999999988888876 3   4899999999999988


Q ss_pred             CCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCc-ccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          204 TNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL-VHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      . . .  .    ......+....+             ...+ ...+|+|+++++++...  ...| .+++.++
T Consensus       231 ~-~-~--~----~~~~~~~~~~~p-------------~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  282 (288)
T 2x9g_A          231 V-A-M--G----EEEKDKWRRKVP-------------LGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG  282 (288)
T ss_dssp             T-T-S--C----HHHHHHHHHTCT-------------TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-c-c--C----hHHHHHHHhhCC-------------CCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence            5 2 1  1    111111111100             2224 68999999999998742  3456 5566554

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.86  E-value=3.3e-20  Score=161.50  Aligned_cols=213  Identities=16%  Similarity=0.165  Sum_probs=146.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-------   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------   79 (341)
                      +++|||||+|+||+++++.|++.|++|++++| +.......  ...+... ..+.++.+|++|++++.++++.       
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r-~~~~~~~~--~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGR-REERLQAL--AGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHH--HHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999 75432221  1111111 4788999999999999988864       


Q ss_pred             CCEEEEeccCCcc-c-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcC-EEEEecccccccCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQH-I-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVK-RLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        80 ~d~Vi~~a~~~~~-~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~-~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      +|++||+||.... .     ..+.++..+++|+.++.++++++.    +.+ .. ++|++||.....+..          
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~----------  166 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYP----------  166 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCT----------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCC----------
Confidence            5999999997542 1     145567899999999888776664    445 56 999999987544221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+.+.++ +   .|+++.+++||.+.++.....  ... ....   .  
T Consensus       167 ------------------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~-~~~~---~--  220 (272)
T 2nwq_A          167 ------------------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGG-DQAR---Y--  220 (272)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--ccc-chHH---H--
Confidence                              24789999999999998887 3   489999999999987642211  000 0000   0  


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-CCc-eEEEec
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MSG-RFFCTN  271 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g-~~n~~~  271 (341)
                       .....          ...++..+|+|++++.++..+. ..| .+.+.+
T Consensus       221 -~~~~~----------~~~~~~pedvA~~v~~l~s~~~~~~g~~i~v~~  258 (272)
T 2nwq_A          221 -DKTYA----------GAHPIQPEDIAETIFWIMNQPAHLNINSLEIMP  258 (272)
T ss_dssp             ----------------CCCCBCHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred             -HHhhc----------cCCCCCHHHHHHHHHHHhCCCccCccceEEEee
Confidence             00000          1224789999999999997543 233 444443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.86  E-value=9.3e-20  Score=155.04  Aligned_cols=208  Identities=15%  Similarity=0.153  Sum_probs=152.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      |+||||||++-||+++++.|++.|++|.+.+| +...   ...+..   ...++.++++|++|+++++++++       +
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~-~~~~---~~~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDI-DEKR---SADFAK---ERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHT---TCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHH---hcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999 6532   222222   23478899999999988877764       6


Q ss_pred             CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                      +|++||+||......     .+.++..+++|+.++..+.+++...  .+-.++|++||.....+...             
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~-------------  142 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPD-------------  142 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTT-------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCC-------------
Confidence            899999998765432     5667899999999999888776433  01379999999875543222             


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c--CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccc
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S--SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVY  229 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~--~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (341)
                                     ...|+.||.....+.+.++ +  .++++..+.||.+-.+.....      .......+       
T Consensus       143 ---------------~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~------~~~~~~~~-------  194 (247)
T 3ged_A          143 ---------------SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF------TQEDCAAI-------  194 (247)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C------CHHHHHTS-------
T ss_pred             ---------------CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH------HHHHHhcC-------
Confidence                           4789999999999998887 4  389999999999855432211      22111110       


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      +          ..-+...+|+|.++++++..+-..| ++.+.++
T Consensus       195 P----------l~R~g~pediA~~v~fL~s~~~iTG~~i~VDGG  228 (247)
T 3ged_A          195 P----------AGKVGTPKDISNMVLFLCQQDFITGETIIVDGG  228 (247)
T ss_dssp             T----------TSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             C----------CCCCcCHHHHHHHHHHHHhCCCCCCCeEEECcC
Confidence            0          2235678999999999997655677 5555443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.86  E-value=2.2e-20  Score=161.17  Aligned_cols=221  Identities=14%  Similarity=0.115  Sum_probs=147.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHH----HHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFE----NAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~----~~~~~~d~   82 (341)
                      |+||||||+|+||+++++.|+++|++|++++| +.........+...   ...+.++  |..+.+.+.    +.+.++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~l~~~---~~~~~~~--d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDE-SFKQKDELEAFAET---YPQLKPM--SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCG-GGGSHHHHHHHHHH---CTTSEEC--CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHhc---CCcEEEE--CHHHHHHHHHHHHHHhCCCCE
Confidence            57999999999999999999999999999999 76553333222221   1233333  554432222    22347999


Q ss_pred             EEEeccCC-ccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPL-QHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        83 Vi~~a~~~-~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                      +||+||.. ...     ..+.++..+++|+.++.++++++.    +.+ ..++|++||..++.+..              
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--------------  140 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWK--------------  140 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCT--------------
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCC--------------
Confidence            99999976 321     144567899999999999988874    344 57999999987544221              


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV  228 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (341)
                                    ....|+.||...+.+.+.++ +   .|+++.+++||.|+|+.....  ..  .+ +..........
T Consensus       141 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~--~~--T~-~~~~~~~~~~~  201 (254)
T 1zmt_A          141 --------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYF--YP--TE-PWKTNPEHVAH  201 (254)
T ss_dssp             --------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSS--CB--HH-HHTTCHHHHHH
T ss_pred             --------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccc--CC--Cc-ccccChHHHHH
Confidence                          24789999999999998876 3   489999999999999865433  10  11 11100000000


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      +....      ....+.+.+|+|+++..++....  ..| .+++.++.
T Consensus       202 ~~~~~------p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  243 (254)
T 1zmt_A          202 VKKVT------ALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGF  243 (254)
T ss_dssp             HHHHS------SSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             HhccC------CCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            00000      03347889999999999987543  345 66776653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.86  E-value=3.7e-20  Score=162.43  Aligned_cols=208  Identities=15%  Similarity=0.162  Sum_probs=150.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh----hh-HhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK----VD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +..+...    ++ ....+......+.++++|++|++++.++++ 
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAK-SAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEES-CCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-ChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4679999999999999999999999999999999 7653211    11 111111113478999999999998887776 


Q ss_pred             ------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                            ++|++||+||......     .+.++..+++|+.++.++++++...    + ..++|++||.....+..     
T Consensus        87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----  160 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKW-----  160 (285)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGGG-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCCC-----
Confidence                  7999999999765322     4556788999999999999988655    3 57999999987443210     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                            .....|+.||...+.+.+.++ +   .|+++..++||.+...            + +.
T Consensus       161 ----------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t------------~-~~  205 (285)
T 3sc4_A          161 ----------------------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT------------A-AV  205 (285)
T ss_dssp             ----------------------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC------------H-HH
T ss_pred             ----------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc------------H-HH
Confidence                                  124789999999999998887 4   4899999999843221            1 11


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-CCce
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MSGR  266 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g~  266 (341)
                      .........            ...+...+|+|++++.++.... ..|.
T Consensus       206 ~~~~~~~~~------------~~r~~~pedvA~~~~~l~s~~~~~tG~  241 (285)
T 3sc4_A          206 QNLLGGDEA------------MARSRKPEVYADAAYVVLNKPSSYTGN  241 (285)
T ss_dssp             HHHHTSCCC------------CTTCBCTHHHHHHHHHHHTSCTTCCSC
T ss_pred             Hhhcccccc------------ccCCCCHHHHHHHHHHHhCCcccccce
Confidence            111111110            3346779999999999997653 4453

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.86  E-value=8.1e-21  Score=163.00  Aligned_cols=204  Identities=16%  Similarity=0.125  Sum_probs=134.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHH---HH---hc
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFE---NA---IQ   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~---~~---~~   78 (341)
                      ++++||||||+|+||+++++.|++ |+.|++++| +...   .+.+...    .++.++.+|+.+.+...   +.   +.
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r-~~~~---~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGR-NPEH---LAALAEI----EGVEPIESDIVKEVLEEGGVDKLKNLD   74 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEES-CHHH---HHHHHTS----TTEEEEECCHHHHHHTSSSCGGGTTCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeC-CHHH---HHHHHhh----cCCcceecccchHHHHHHHHHHHHhcC
Confidence            468999999999999999999988 999999999 6543   2333222    36889999998864321   12   23


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|++||+||......     .+.++..+++|+.++.++++++.    +.+  .++|++||..++.+..           
T Consensus        75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~-----------  141 (245)
T 3e9n_A           75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPHP-----------  141 (245)
T ss_dssp             CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC--------------------
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCCC-----------
Confidence            6899999999765432     34456889999999888887764    333  6899999987555321           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                       ....|+.||...+.+.+.++ +   .|+++.+++||.+.++.....      ....       
T Consensus       142 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~-------  191 (245)
T 3e9n_A          142 -----------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGL------MDSQ-------  191 (245)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------
T ss_pred             -----------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhh------hhhh-------
Confidence                             25789999999999999887 3   489999999999988743321      0000       


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEe
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCT  270 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~  270 (341)
                      ....    .      ...+++++|+|+++..++..+....++|+.
T Consensus       192 ~~~~----~------~~~~~~p~dvA~~i~~l~~~~~~~~~~~i~  226 (245)
T 3e9n_A          192 GTNF----R------PEIYIEPKEIANAIRFVIDAGETTQITNVD  226 (245)
T ss_dssp             --------C------CGGGSCHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred             hccc----c------cccCCCHHHHHHHHHHHHcCCCccceeeeE
Confidence            0000    0      345788999999999999877665677764

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.85  E-value=2.9e-20  Score=162.76  Aligned_cols=224  Identities=14%  Similarity=0.083  Sum_probs=155.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |+ .+++++|||||+|.||+++++.|++.|++|++++| +...   .+.+...  ....+.++.+|+++++++.++++  
T Consensus         1 M~-l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~---~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~   73 (281)
T 3zv4_A            1 MK-LTGEVALITGGASGLGRALVDRFVAEGARVAVLDK-SAER---LRELEVA--HGGNAVGVVGDVRSLQDQKRAAERC   73 (281)
T ss_dssp             CT-TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHH--TBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CC-cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC-CHHH---HHHHHHH--cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            44 34689999999999999999999999999999999 6543   2222221  12478999999999988777765  


Q ss_pred             -----CCCEEEEeccCCcccc----------chhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID----------GYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~----------~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                           ++|++||+||......          .+.++..+++|+.++.++++++...-  +-.++|++||..+..+..   
T Consensus        74 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  150 (281)
T 3zv4_A           74 LAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG---  150 (281)
T ss_dssp             HHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS---
T ss_pred             HHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC---
Confidence                 6899999999754311          12366789999999999999875432  126999999987655322   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCC-CC-chhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSS-TP-VSVI  216 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~-~~-~~~~  216 (341)
                                               ....|+.||...+.+.+.++ +.  .+++..+.||.|..+....... .. ....
T Consensus       151 -------------------------~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~  205 (281)
T 3zv4_A          151 -------------------------GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSIS  205 (281)
T ss_dssp             -------------------------SCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC-------
T ss_pred             -------------------------CCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCccccccccccccccc
Confidence                                     24789999999999999887 42  4999999999998774332100 00 0000


Q ss_pred             --hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC---CCc-eEEEecc
Q 019415          217 --GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSG-RFFCTNV  272 (341)
Q Consensus       217 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g-~~n~~~~  272 (341)
                        .+...+...       .      ....+...+|+|+++++++..+.   ..| ++++.++
T Consensus       206 ~~~~~~~~~~~-------~------p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG  254 (281)
T 3zv4_A          206 SVPLADMLKSV-------L------PIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG  254 (281)
T ss_dssp             -CCHHHHHHHT-------C------TTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred             chhHHHHHHhc-------C------CCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence              011111111       0      04457789999999999987322   456 6677655

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.85  E-value=7.1e-20  Score=161.11  Aligned_cols=220  Identities=14%  Similarity=0.099  Sum_probs=153.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEe-cCCCCchhhh-hHhhhCCCCCCceEEEecCCCChH-------
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTL-RPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPD-------   71 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~-------   71 (341)
                      |...+++++|||||+|.||+++++.|++.|++|++++ | +....... +.+..  .....+.++.+|+++++       
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r-~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~~~~~~~   80 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR-SAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGA   80 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS-CHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCCCC--
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCC-CHHHHHHHHHHHhh--hcCCeeEEEEeecCCccccccccc
Confidence            4434568999999999999999999999999999999 8 65432221 12220  11247899999999988       


Q ss_pred             ----------HHHHHhc-------CCCEEEEeccCCcccc-------------------chhHhHhhhhhhhHHHHHHHH
Q 019415           72 ----------TFENAIQ-------GCDFVFHVATPLQHID-------------------GYLYKNVVEACVGAAKKIASF  115 (341)
Q Consensus        72 ----------~~~~~~~-------~~d~Vi~~a~~~~~~~-------------------~~~~~~~~~~nv~~~~~l~~~  115 (341)
                                ++.++++       ++|++||+||......                   .+.++..+++|+.++.+++++
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           81 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             --CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                      8887765       6899999999754321                   234568899999999999988


Q ss_pred             HHhc---CC------cCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc
Q 019415          116 CVKS---GT------VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG  186 (341)
Q Consensus       116 ~~~~---~~------~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  186 (341)
                      +...   ..      ..++|++||.....+..                            ....|+.||...+.+.+.++
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~----------------------------~~~~Y~asKaa~~~l~~~la  212 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL----------------------------GYTIYTMAKGALEGLTRSAA  212 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSCCT----------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcCCCC----------------------------CCchhHHHHHHHHHHHHHHH
Confidence            7642   11      36899999987544221                            24789999999999998876


Q ss_pred             -c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCC-CcccHHHHHHHHHHhhcCC
Q 019415          187 -S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL-PLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       187 -~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~  261 (341)
                       +   .|+++..++||.+..+. . .   +   +.....+....+             .. .+...+|+|+++++++...
T Consensus       213 ~e~~~~gI~vn~v~PG~v~T~~-~-~---~---~~~~~~~~~~~p-------------~~~r~~~pedvA~~v~~l~s~~  271 (291)
T 1e7w_A          213 LELAPLQIRVNGVGPGLSVLVD-D-M---P---PAVWEGHRSKVP-------------LYQRDSSAAEVSDVVIFLCSSK  271 (291)
T ss_dssp             HHHGGGTEEEEEEEESSBCCGG-G-S---C---HHHHHHHHTTCT-------------TTTSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhcCeEEEEEeeCCccCCc-c-C---C---HHHHHHHHhhCC-------------CCCCCCCHHHHHHHHHHHhCCc
Confidence             3   48999999999986653 1 1   1   111121211100             12 3678999999999998642


Q ss_pred             --CCCc-eEEEecc
Q 019415          262 --SMSG-RFFCTNV  272 (341)
Q Consensus       262 --~~~g-~~n~~~~  272 (341)
                        ...| .+++.++
T Consensus       272 ~~~itG~~i~vdGG  285 (291)
T 1e7w_A          272 AKYITGTCVKVDGG  285 (291)
T ss_dssp             GTTCCSCEEEESTT
T ss_pred             ccCccCcEEEECCC
Confidence              2456 5666554

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.85  E-value=6.5e-20  Score=163.85  Aligned_cols=169  Identities=19%  Similarity=0.131  Sum_probs=131.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hh---CCCCCCceEEEecCCCChHHHHHHhcC--
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KS---LPGAETRLIFFEAEIYDPDTFENAIQG--   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   79 (341)
                      +++||||||+|+||+++++.|++.|++|+++.| +..+....... ..   .......+.++.+|+++++++.++++.  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYA-TLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEE-EESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEe-ecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            578999999999999999999999999988888 65543332221 11   111124789999999999999999874  


Q ss_pred             ---CCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           80 ---CDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        80 ---~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                         +|++||+||.....     ..+.++..+++|+.++.++++++    ++.+ ..+||++||...+.+..         
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~---------  150 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLP---------  150 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCT---------
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCC---------
Confidence               89999999975432     14456789999999999999986    3445 68999999987544321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCC
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDT  204 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~  204 (341)
                                         ....|+.||...+.+.+.++ +   .|+++++++||.|..+.
T Consensus       151 -------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~  192 (327)
T 1jtv_A          151 -------------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF  192 (327)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             -------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence                               14689999999999998887 3   59999999999998764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.85  E-value=6.1e-19  Score=151.33  Aligned_cols=227  Identities=17%  Similarity=0.172  Sum_probs=159.9

Q ss_pred             CCC-CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDH-KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~-~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |+. .++|.+|||||++-||+++++.|++.|.+|.+.+| +.+.....+.+...   ..++.++.+|++++++++++++ 
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~   76 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFAR-HAPDGAFLDALAQR---QPRATYLPVELQDDAQCRDAVAQ   76 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCCHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CcccHHHHHHHHhc---CCCEEEEEeecCCHHHHHHHHHH
Confidence            663 36799999999999999999999999999999999 87664444444332   3478899999999987777664 


Q ss_pred             ------CCCEEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                            +.|++||+||......    .+.++..+++|+.++..+.+++...   + -.++|++||.....+...      
T Consensus        77 ~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~------  149 (258)
T 4gkb_A           77 TIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGN------  149 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSS------
T ss_pred             HHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCC------
Confidence                  6899999999754322    5667889999999999988876432   1 269999999986654322      


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                            ...|+.||...+.+.+.++    .+|+++..+.||.|..+..................
T Consensus       150 ----------------------~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~  207 (258)
T 4gkb_A          150 ----------------------TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAE  207 (258)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHH
T ss_pred             ----------------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHH
Confidence                                  4789999999999988887    35999999999999766433210000000111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      +....+.            .+-+...+|+|.++++++...  ...| ++.+.++
T Consensus       208 ~~~~~pl------------g~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG  249 (258)
T 4gkb_A          208 IAAKVPL------------GRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG  249 (258)
T ss_dssp             HHTTCTT------------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhcCCC------------CCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence            1111100            134667899999999988643  2466 5566544

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.85  E-value=5.2e-20  Score=159.52  Aligned_cols=167  Identities=17%  Similarity=0.137  Sum_probs=129.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||+|+||+++++.|+++|++|++++| +........  ..+......+.++.+|+++++++.++++      
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM-NREALEKAE--ASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHH--HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999 754322211  1111223468899999999988877765      


Q ss_pred             -CCCEEEEeccCC-ccc-----cchhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPL-QHI-----DGYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~-~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|++||+||.. ...     ..+.++..+++|+.++.++++++...    + ..++|++||..+..+..         
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~---------  152 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPP---------  152 (262)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCT---------
T ss_pred             CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCC---------
Confidence             789999999975 211     14456789999999999998887543    4 57999999987655321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCC
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGD  203 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~  203 (341)
                                         ....|+.||...+.+.+.++    ..|+++.+++||.+..+
T Consensus       153 -------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  193 (262)
T 1zem_A          153 -------------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  193 (262)
T ss_dssp             -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence                               24789999999888888776    34899999999998654

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.85  E-value=4.3e-20  Score=162.13  Aligned_cols=199  Identities=16%  Similarity=0.094  Sum_probs=144.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +........ .+....  ...+.++.+|++|++.+.++++     
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR-SKETLQKVVSHCLELG--AASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHT--CSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHhC--CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999 764322221 111111  1268899999999988877765     


Q ss_pred             --CCCEEEEe-ccCCccc----cchhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHV-ATPLQHI----DGYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 --~~d~Vi~~-a~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                        ++|++||+ |+.....    ..+.++..+++|+.++.++++++...   + ..++|++||..+..+..          
T Consensus       104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  172 (286)
T 1xu9_A          104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYP----------  172 (286)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCT----------
T ss_pred             cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCC----------
Confidence              79999999 5654321    13445688999999999998887543   2 36999999987544221          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                        +...|+.||...+.+++.++ +     .++++++++||.+..+.          ..   ...
T Consensus       173 ------------------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~----------~~---~~~  221 (286)
T 1xu9_A          173 ------------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET----------AM---KAV  221 (286)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH----------HH---HHS
T ss_pred             ------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh----------HH---Hhc
Confidence                              24789999999999888775 3     38999999999985541          10   000


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                       ..       ..      ...+++.+|+|++++.++....
T Consensus       222 -~~-------~~------~~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          222 -SG-------IV------HMQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             -CG-------GG------GGGCBCHHHHHHHHHHHHHTTC
T ss_pred             -cc-------cc------cCCCCCHHHHHHHHHHHHhcCC
Confidence             00       00      2346889999999999997643

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.85  E-value=4.3e-19  Score=149.98  Aligned_cols=215  Identities=14%  Similarity=0.080  Sum_probs=155.5

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc---CC
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---GC   80 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~   80 (341)
                      +++|++|||||++-||+++++.|++.|++|.+.+| +.+...      .  .....+..+.+|++|++.++++++   +.
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~-~~~~~~------~--~~~~~~~~~~~Dv~~~~~v~~~~~~~g~i   79 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGL-DADGVH------A--PRHPRIRREELDITDSQRLQRLFEALPRL   79 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STTSTT------S--CCCTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHh------h--hhcCCeEEEEecCCCHHHHHHHHHhcCCC
Confidence            36799999999999999999999999999999999 764311      1  223578999999999998888876   68


Q ss_pred             CEEEEeccCCcccc---chhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID---GYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYT  155 (341)
Q Consensus        81 d~Vi~~a~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~  155 (341)
                      |++||+||......   .+.++..+++|+.++..+.+++...-  +-.++|++||.....+...                
T Consensus        80 DiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~----------------  143 (242)
T 4b79_A           80 DVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSAD----------------  143 (242)
T ss_dssp             SEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSS----------------
T ss_pred             CEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCC----------------
Confidence            99999999765433   55678999999999998887764321  0269999999876543322                


Q ss_pred             CCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccccc
Q 019415          156 PPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQT  231 (341)
Q Consensus       156 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (341)
                                  ...|+.||.....+.+.++ +   +|+++..+-||.|..+.....  ..  -....+.+....+    
T Consensus       144 ------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~--~~--~~~~~~~~~~~~P----  203 (242)
T 4b79_A          144 ------------RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGL--KA--DVEATRRIMQRTP----  203 (242)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-------CC--CHHHHHHHHHTCT----
T ss_pred             ------------CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcc--cC--CHHHHHHHHhcCC----
Confidence                        4789999999999888877 3   499999999999977643322  11  1112222222111    


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                               ..-+...+|+|.++++++...  -.+| ++.+.++
T Consensus       204 ---------lgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          204 ---------LARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             ---------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ---------CCCCcCHHHHHHHHHHHhCchhcCccCceEEECcc
Confidence                     223567899999999998643  2456 5566544

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.85  E-value=9.6e-20  Score=163.66  Aligned_cols=214  Identities=14%  Similarity=0.188  Sum_probs=153.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh----h-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK----V-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      ++++||||||+|.||.++++.|++.|++|++++| +.....+    + .....+......+.++.+|++|+++++++++ 
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r-~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAK-TAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-CCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEEC-ChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999999 7654221    1 1111111123478999999999998888776 


Q ss_pred             ------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                            ++|++||+||......     .+.++..+++|+.++.++++++.    +.+ ..+||++||...+.+...    
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~~----  197 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWF----  197 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGGT----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCCC----
Confidence                  7999999999755322     45567899999999999999984    334 579999999875442101    


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c--CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S--SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~--~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            .....|+.||...+.+.+.++ +  .++++..+.|+.+...             .+..
T Consensus       198 ----------------------~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T-------------~~~~  242 (346)
T 3kvo_A          198 ----------------------KQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT-------------AAMD  242 (346)
T ss_dssp             ----------------------SSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC-------------HHHH
T ss_pred             ----------------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc-------------HHHH
Confidence                                  125789999999999999887 4  4899999999963322             1111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-CCceEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MSGRFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g~~n~~~~  272 (341)
                      .+.....             ...+..++|+|++++.++.... ..|.+.+.++
T Consensus       243 ~~~~~~~-------------~~r~~~pedvA~~v~~L~s~~~~itG~~ivdgg  282 (346)
T 3kvo_A          243 MLGGPGI-------------ESQCRKVDIIADAAYSIFQKPKSFTGNFVIDEN  282 (346)
T ss_dssp             HHCC--C-------------GGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred             hhccccc-------------cccCCCHHHHHHHHHHHHhcCCCCCceEEECCc
Confidence            1111110             2235678999999999998632 4665555444

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.85  E-value=7.2e-20  Score=157.23  Aligned_cols=197  Identities=15%  Similarity=0.134  Sum_probs=144.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCC--CChHHHHHHhc---
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEI--YDPDTFENAIQ---   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~---   78 (341)
                      ++++||||||+|+||+++++.|+++|++|++++| +....... +.+...  ......++.+|+  ++.+++.++++   
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~--~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGR-TEASLAEVSDQIKSA--GQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHT--TSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEec-CHHHHHHHHHHHHhc--CCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            4579999999999999999999999999999999 76543322 222221  123567777777  88877776654   


Q ss_pred             ----CCCEEEEeccCCccc------cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHI------DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                          ++|++||+||.....      ..+.++..+++|+.++.++++++    ++.+ ..++|++||.....+..      
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~------  162 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRA------  162 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCT------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCC------
Confidence                789999999975321      14556789999999999999998    3444 57999999987554321      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                            ....|+.+|...+.+.+.++ +    .++++..++||.+..+.              .
T Consensus       163 ----------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~--------------~  206 (247)
T 3i1j_A          163 ----------------------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM--------------R  206 (247)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH--------------H
T ss_pred             ----------------------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc--------------c
Confidence                                  24789999999999998876 3    47999999999885431              1


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                      ........             ...+...+|+|++++.++..
T Consensus       207 ~~~~~~~~-------------~~~~~~p~dva~~~~~l~s~  234 (247)
T 3i1j_A          207 AQAYPDEN-------------PLNNPAPEDIMPVYLYLMGP  234 (247)
T ss_dssp             HHHSTTSC-------------GGGSCCGGGGTHHHHHHHSG
T ss_pred             hhcccccC-------------ccCCCCHHHHHHHHHHHhCc
Confidence            11111100             22356689999999999864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.85  E-value=2.2e-20  Score=175.18  Aligned_cols=226  Identities=18%  Similarity=0.153  Sum_probs=162.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhcCC--
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYI-VHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQGC--   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--   80 (341)
                      .+++||||||+|+||.++++.|+++|++ |++++| +.........+ ..+......+.++.+|++|++.+.++++.+  
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R-~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSR-SGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEES-SGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcC-CCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence            4579999999999999999999999985 899999 76432222211 111122347899999999999999998764  


Q ss_pred             ----CEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           81 ----DFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        81 ----d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                          |+|||+||.....     ..+.++..+++|+.++.++.+++...+ .++||++||...+++...            
T Consensus       304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~~g------------  370 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG------------  370 (486)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT------------
T ss_pred             cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCCCC------------
Confidence                9999999976542     144567889999999999999999887 899999999876664322            


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccccc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQT  231 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (341)
                                      ...|+.+|...+.+...+...|+++++++||.+.+.+....        .....+..       
T Consensus       371 ----------------~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~--------~~~~~~~~-------  419 (486)
T 2fr1_A          371 ----------------LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--------PVADRFRR-------  419 (486)
T ss_dssp             ----------------CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC--------------------CTT-------
T ss_pred             ----------------CHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccch--------hHHHHHHh-------
Confidence                            36799999999988877766699999999999877532111        00000000       


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhC
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNY  287 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~  287 (341)
                        .      ...+++.+|+++++..++.....  .+.+.  .+.+..+...+....
T Consensus       420 --~------g~~~i~~e~~a~~l~~~l~~~~~--~~~v~--~~d~~~~~~~~~~~~  463 (486)
T 2fr1_A          420 --H------GVIEMPPETACRALQNALDRAEV--CPIVI--DVRWDRFLLAYTAQR  463 (486)
T ss_dssp             --T------TEECBCHHHHHHHHHHHHHTTCS--SCEEC--EECHHHHHHHHTSSS
T ss_pred             --c------CCCCCCHHHHHHHHHHHHhCCCC--eEEEE--eCCHHHHhhhhcccC
Confidence              0      34578999999999999986442  22222  256777766655443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.84  E-value=8.7e-20  Score=171.71  Aligned_cols=226  Identities=18%  Similarity=0.172  Sum_probs=164.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhH-hhhCCCCCCceEEEecCCCChHHHHHHhcC--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDL-LKSLPGAETRLIFFEAEIYDPDTFENAIQG--C   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~   80 (341)
                      .+++||||||+|+||.++++.|++.|+ .|++++| +......... ...+......+.++.+|++|++.+.++++.  +
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R-~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l  336 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSR-RGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP  336 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEES-SGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEec-CCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence            457999999999999999999999998 5888899 7643222221 122222334789999999999999999975  9


Q ss_pred             CEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEecccccccCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCY  154 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~  154 (341)
                      |+|||+||......     .+.++..+++|+.++.++.+++... + .++||++||...+++...               
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~~g---------------  400 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGNAG---------------  400 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCCTT---------------
T ss_pred             cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCCCC---------------
Confidence            99999999765431     3456688999999999999999876 5 789999999876664322               


Q ss_pred             CCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccc
Q 019415          155 TPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRD  234 (341)
Q Consensus       155 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (341)
                                   ...|+.+|...|.+.+.+...|+++++++||.+-+.+....     ..   ...+.         ..
T Consensus       401 -------------~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~-----~~---~~~~~---------~~  450 (511)
T 2z5l_A          401 -------------QGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAG-----AG---EESLS---------RR  450 (511)
T ss_dssp             -------------BHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCC-----HH---HHHHH---------HH
T ss_pred             -------------CHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCccccc-----cc---HHHHH---------hc
Confidence                         47899999999999987766799999999998733221111     00   11111         01


Q ss_pred             hhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhC
Q 019415          235 TEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNY  287 (341)
Q Consensus       235 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~  287 (341)
                            ....++.+|+++++..++.....  .+.+.  .+.+..+...+....
T Consensus       451 ------g~~~l~~e~~a~~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~  493 (511)
T 2z5l_A          451 ------GLRAMDPDAAVDALLGAMGRNDV--CVTVV--DVDWERFAPATNAIR  493 (511)
T ss_dssp             ------TBCCBCHHHHHHHHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred             ------CCCCCCHHHHHHHHHHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence                  45578999999999999975432  22232  456777776665443

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.84  E-value=1.2e-18  Score=148.90  Aligned_cols=220  Identities=18%  Similarity=0.153  Sum_probs=155.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|.+|||||++-||+++++.|++.|.+|.+.+| +.+......  +.+.....++.++++|++|+++++++++      
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~-~~~~~~~~~--~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVEL-LEDRLNQIV--QELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHH--HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999 764432221  1222233578999999999988887765      


Q ss_pred             -CCCEEEEeccCCcc-c---c--chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQH-I---D--GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~-~---~--~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       ++|++||+||.... .   .  .+.++..+++|+.++..+.+++..    .+ -.++|++||.....+...        
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~--------  153 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFA--------  153 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSS--------
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCC--------
Confidence             68999999996432 1   1  566789999999999888777643    34 479999999875543222        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                          ...|+.||.....+.+.++ +   +|+++..+-||.|-.+.........   ....+...
T Consensus       154 --------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~---~~~~~~~~  210 (254)
T 4fn4_A          154 --------------------GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPS---ELGMRTLT  210 (254)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCC---HHHHHHHH
T ss_pred             --------------------ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCc---HHHHHHHH
Confidence                                4789999999998888887 3   5999999999999776433220001   11111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTN  271 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~  271 (341)
                      .....            ..-+...+|+|.++++++...  -..| ++.+.+
T Consensus       211 ~~~~~------------~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDG  249 (254)
T 4fn4_A          211 KLMSL------------SSRLAEPEDIANVIVFLASDEASFVNGDAVVVDG  249 (254)
T ss_dssp             HHHTT------------CCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcCCC------------CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCC
Confidence            11000            123556899999999998643  2456 555543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.83  E-value=5.4e-19  Score=156.86  Aligned_cols=185  Identities=18%  Similarity=0.233  Sum_probs=130.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCCh-HHHHHHhc----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDP-DTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~----   78 (341)
                      ++++||||||+|+||.++++.|+++|++|++++| +..+... .+.+...  ....+.++.+|++++ +.+..+++    
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r-~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCR-DVTKGHEAVEKLKNS--NHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTT--TCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHhc--CCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999 7654222 2222221  224799999999998 76666554    


Q ss_pred             ---CCCEEEEeccCCccc-----------------------------------cchhHhHhhhhhhhHHHHHHHHHHh--
Q 019415           79 ---GCDFVFHVATPLQHI-----------------------------------DGYLYKNVVEACVGAAKKIASFCVK--  118 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~-----------------------------------~~~~~~~~~~~nv~~~~~l~~~~~~--  118 (341)
                         ++|++||+||.....                                   ..+.++..+++|+.++..+++++..  
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence               799999999986421                                   1334567799999999998888743  


Q ss_pred             --cCCcCEEEEecccccccCCCCCC---------CC---------------CC-CCCCCCCCCCCCCCCCccCcchhhhH
Q 019415          119 --SGTVKRLIYTASVLCASPLKEDG---------SA---------------GY-KDSIDETCYTPPDHPLTCHNEYLRVY  171 (341)
Q Consensus       119 --~~~~~~~I~~Ss~~~~~~~~~~~---------~~---------------~~-~~~~~E~~~~~~~~~~~~~~~~~~~Y  171 (341)
                        .+ ..++|++||.....+.....         ..               .. .....+..+          ......|
T Consensus       168 ~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~Y  236 (311)
T 3o26_A          168 QLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGW----------PSFGAAY  236 (311)
T ss_dssp             TTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTC----------CSSCHHH
T ss_pred             ccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccC----------cccchhh
Confidence              34 57999999987655321100         00               00 000001100          1224789


Q ss_pred             HHhHHHHHHHHHhhc-cC-CceEEEEecCceeCC
Q 019415          172 IESKMKSEKELLSYG-SS-GLEVVALALGVVAGD  203 (341)
Q Consensus       172 ~~sK~~~E~~~~~~~-~~-~~~~~vlRp~~v~G~  203 (341)
                      +.||...+.+.+.++ +. ++++..+.||.|..+
T Consensus       237 ~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~  270 (311)
T 3o26_A          237 TTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE  270 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred             HHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence            999999999999998 54 799999999999665

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.83  E-value=1.4e-19  Score=154.70  Aligned_cols=220  Identities=14%  Similarity=0.051  Sum_probs=156.1

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|.+.+| +.+..... +.+..   ...++.++++|++|+++++++++    
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~-~~~~~~~~~~~l~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDI-RATLLAESVDTLTR---KGYDAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCS-CHHHHHHHHHHHHH---TTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999998 65432222 22222   23578999999999988887765    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++..+.+++..    .+.-.++|++||.....+...       
T Consensus        83 ~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~-------  155 (255)
T 4g81_D           83 EGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT-------  155 (255)
T ss_dssp             TTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT-------
T ss_pred             HCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC-------
Confidence               5899999999765433     567789999999999998877532    221469999999876543222       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                           ...|+.||.....+.+.++    .+|+++..+.||.|..+.....  ..  -+.+...+
T Consensus       156 ---------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~--~~--~~~~~~~~  210 (255)
T 4g81_D          156 ---------------------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTAL--IE--DKQFDSWV  210 (255)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHH--HT--CHHHHHHH
T ss_pred             ---------------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcc--cC--CHHHHHHH
Confidence                                 4789999999998888876    3599999999999966532110  00  01111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....+             ..-+...+|+|.++++++...  -..| ++.+.++
T Consensus       211 ~~~~P-------------l~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          211 KSSTP-------------SQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             HHHST-------------TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhCCC-------------CCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence            11100             223566899999999988643  2456 5666554

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.83  E-value=2.4e-19  Score=156.40  Aligned_cols=210  Identities=14%  Similarity=0.139  Sum_probs=148.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh----hhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK----VDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +......    ++.. ..+......+.++.+|++|++++.++++ 
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAK-SAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEec-cchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999999 7653211    1111 1111113478999999999988887765 


Q ss_pred             ------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                            ++|++||+||......     .+.++..+++|+.++..+++++..    .+ ..++|++||.....+..     
T Consensus        84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----  157 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAW-----  157 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHH-----
T ss_pred             HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC-----
Confidence                  6899999999764322     455678899999999999998744    34 57999999987543210     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                           ......|+.||...+.+.+.++ +   .|+++..++||.+......             
T Consensus       158 ---------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~-------------  203 (274)
T 3e03_A          158 ---------------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI-------------  203 (274)
T ss_dssp             ---------------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------
T ss_pred             ---------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh-------------
Confidence                                 0234789999999999998887 3   4899999999953322100             


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCceEEE
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSGRFFC  269 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g~~n~  269 (341)
                      ......       .       ...+...+|+|+++..++....  ..|.+.+
T Consensus       204 ~~~~~~-------~-------~~~~~~pedvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          204 NMLPGV-------D-------AAACRRPEIMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             ----CC-------C-------GGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             hhcccc-------c-------ccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence            000000       0       2225679999999999997543  3564444

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.82  E-value=6.7e-19  Score=152.37  Aligned_cols=166  Identities=15%  Similarity=0.127  Sum_probs=125.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      +++++|||||+|+||+++++.|+++|++|++++| +....... +.+...   ...+.++.+|++|++++.++++     
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGR-HLDTLRVVAQEAQSL---GGQCVPVVCDSSQESEVRSLFEQVDRE   79 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH---SSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHHHc---CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999 75432221 112111   2368899999999987776653     


Q ss_pred             ---CCCEEEEecc--CC-------cc---ccchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCC
Q 019415           79 ---GCDFVFHVAT--PL-------QH---IDGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKE  139 (341)
Q Consensus        79 ---~~d~Vi~~a~--~~-------~~---~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~  139 (341)
                         ++|++||+||  ..       ..   ...+.++..+++|+.++..+.+++.    +.+ ..++|++||.....+   
T Consensus        80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~---  155 (260)
T 2qq5_A           80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQY---  155 (260)
T ss_dssp             HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSC---
T ss_pred             cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCC---
Confidence               4799999994  21       11   1144567889999999987766654    444 589999999874321   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCC
Q 019415          140 DGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDT  204 (341)
Q Consensus       140 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~  204 (341)
                                                .+...|+.||...+.+.+.++ +   .|+++.+++||.+..+.
T Consensus       156 --------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (260)
T 2qq5_A          156 --------------------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL  198 (260)
T ss_dssp             --------------------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred             --------------------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence                                      113689999999999998886 3   48999999999998764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.82  E-value=1.3e-18  Score=151.40  Aligned_cols=168  Identities=8%  Similarity=-0.023  Sum_probs=129.4

Q ss_pred             CCCCCcEEEEecC--cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            2 DHKSNFKVCVTGG--EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         2 ~~~~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      ...+++++|||||  +|.||+++++.|++.|++|++++| +...  ..+.+..  .....+.++.+|++++++++++++ 
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r-~~~~--~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF-DRLR--LIQRITD--RLPAKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEEC-SCHH--HHHHHHT--TSSSCCCEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEec-ChHH--HHHHHHH--hcCCCceEEEccCCCHHHHHHHHHH
Confidence            3445689999999  999999999999999999999999 6532  1122222  112367899999999998888776 


Q ss_pred             ---------CCCEEEEeccCCcc--------c--cchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCC
Q 019415           79 ---------GCDFVFHVATPLQH--------I--DGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLK  138 (341)
Q Consensus        79 ---------~~d~Vi~~a~~~~~--------~--~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~  138 (341)
                               ++|++||+||....        .  ..+.++..+++|+.++.++++++...- .-.++|++||... ++. 
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~-  155 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAM-  155 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCC-
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-ccc-
Confidence                     78999999997541        1  144567889999999999999997642 0258999999763 211 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          139 EDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                                 .....|+.||...+.+.+.++ +   .|+++..++||.+..+
T Consensus       156 ---------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~  197 (269)
T 2h7i_A          156 ---------------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL  197 (269)
T ss_dssp             ---------------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred             ---------------------------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence                                       124789999999999998886 3   4899999999998654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.82  E-value=3.9e-19  Score=153.78  Aligned_cols=210  Identities=15%  Similarity=0.124  Sum_probs=146.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHH---CCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLD---KGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      +++++|||||+|.||+++++.|++   .|++|++++| +....... +.+.... ....+.++.+|+++++++.++++  
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r-~~~~~~~~~~~l~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR-SESMLRQLKEELGAQQ-PDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES-CHHHHHHHHHHHHHHC-TTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeC-CHHHHHHHHHHHHhhC-CCCeEEEEecCCCCHHHHHHHHHHH
Confidence            457899999999999999999999   8999999999 75432221 1221110 12368899999999988877664  


Q ss_pred             -------CCC--EEEEeccCCcc--------ccchhHhHhhhhhhhHHHHHHHHHHhcC-----CcCEEEEecccccccC
Q 019415           79 -------GCD--FVFHVATPLQH--------IDGYLYKNVVEACVGAAKKIASFCVKSG-----TVKRLIYTASVLCASP  136 (341)
Q Consensus        79 -------~~d--~Vi~~a~~~~~--------~~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~~I~~Ss~~~~~~  136 (341)
                             ++|  ++||+||....        ...+.++..+++|+.++.++++++...-     ...++|++||..++.+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence                   358  99999997532        1235567899999999999999986542     1357999999875442


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cC-CceEEEEecCceeCCCCCCCCCCCch
Q 019415          137 LKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SS-GLEVVALALGVVAGDTNLPYSSTPVS  214 (341)
Q Consensus       137 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~-~~~~~vlRp~~v~G~~~~~~~~~~~~  214 (341)
                      ..                            ....|+.||...+.+.+.++ +. ++++..+.||.+-.+.          
T Consensus       163 ~~----------------------------~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~----------  204 (259)
T 1oaa_A          163 YK----------------------------GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM----------  204 (259)
T ss_dssp             CT----------------------------TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH----------
T ss_pred             CC----------------------------CccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch----------
Confidence            21                            24789999999999999988 54 5999999999884431          


Q ss_pred             hhhhHhhHhcCc--cccccccchhhccCCCCcccHHHHHHHHHHhhcC
Q 019415          215 VIGGLCQLTNNE--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK  260 (341)
Q Consensus       215 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  260 (341)
                      ...+........  ..+.....      ...+..++|+|++++.++..
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~p------~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          205 QQLARETSKDPELRSKLQKLKS------DGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHHHHHCSCHHHHHHHHHHHH------TTCSBCHHHHHHHHHHHHHH
T ss_pred             HHHHhhccCChhHHHHHHHhhh------cCCcCCHHHHHHHHHHHHhh
Confidence            111110000000  00000000      33478899999999998864

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.82  E-value=1.8e-18  Score=149.23  Aligned_cols=221  Identities=15%  Similarity=0.132  Sum_probs=154.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|.+|||||++-||+++++.|++.|++|.+.+| +.+....  ....+   ..+...+++|++|+++++++++      
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r-~~~~l~~--~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~  101 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGR-RKDVLDA--AIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA  101 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHH--HHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHH--HHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5688999999999999999999999999999999 7543221  12222   2478889999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                       ++|++||+||......     .+.++..+++|+.++..+.+++...- +-.++|++||.....+...            
T Consensus       102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~------------  169 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA------------  169 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT------------
T ss_pred             CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC------------
Confidence             5899999999755432     56778999999999999999886542 1258999999875543222            


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCC-CCCchhhhhHhhHhcCc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYS-STPVSVIGGLCQLTNNE  226 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~  226 (341)
                                      ...|+.||.....+.+.++ +   +|+++..+.||.+..+...... ..+.....+...+....
T Consensus       170 ----------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  233 (273)
T 4fgs_A          170 ----------------FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQV  233 (273)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHS
T ss_pred             ----------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcC
Confidence                            4789999999999888876 3   4899999999999766432210 00001111222221111


Q ss_pred             cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          227 YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      +             ..-+...+|+|.++++++...  -..| ++.+.++
T Consensus       234 P-------------lgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG  269 (273)
T 4fgs_A          234 P-------------MGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGG  269 (273)
T ss_dssp             T-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-------------CCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence            0             223566899999999998643  3466 5555443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.82  E-value=4.9e-18  Score=146.39  Aligned_cols=225  Identities=12%  Similarity=0.035  Sum_probs=158.1

Q ss_pred             CCCCCCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            1 MDHKSNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      |...++|++|||||+|  -||.++++.|++.|++|.+.+| +............. ....++.++++|+++++++.++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r-~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~   78 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYR-KERSRKELEKLLEQ-LNQPEAHLYQIDVQSDEEVINGFE   78 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHGG-GTCSSCEEEECCTTCHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh-cCCCcEEEEEccCCCHHHHHHHHH
Confidence            6667889999999987  7999999999999999999999 76554443332221 112478899999999988877664


Q ss_pred             -------CCCEEEEeccCCcccc---------chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCC
Q 019415           79 -------GCDFVFHVATPLQHID---------GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        79 -------~~d~Vi~~a~~~~~~~---------~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                             ++|++||+||......         .+.+...+++|+.++..+..++...- .-.++|++||.....+..   
T Consensus        79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~---  155 (256)
T 4fs3_A           79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQ---  155 (256)
T ss_dssp             HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCT---
T ss_pred             HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcc---
Confidence                   6899999999654311         33445677889999988888776542 125899999987654322   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                               ....|+.||...+.+.+.++ +   +|+++..+.||.+-.+.....   .. .+.
T Consensus       156 -------------------------~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~---~~-~~~  206 (256)
T 4fs3_A          156 -------------------------NYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV---GG-FNT  206 (256)
T ss_dssp             -------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC---TT-HHH
T ss_pred             -------------------------cchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc---cC-CHH
Confidence                                     25789999999998888876 3   599999999999876543322   11 122


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..+.+....+             ..-+...+|+|.++++++...  -.+| ++.+.++
T Consensus       207 ~~~~~~~~~P-------------l~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          207 ILKEIKERAP-------------LKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             HHHHHHHHST-------------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            2222221111             223566899999999998643  2466 5555444

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.82  E-value=1.8e-18  Score=160.68  Aligned_cols=214  Identities=13%  Similarity=0.074  Sum_probs=152.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +++++|||||+|.||.++++.|+++|++|++++| +.............     ++.++.+|++|++++.++++      
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r-~~~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-DGAAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeC-CccHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            4579999999999999999999999999999988 64332222222221     46789999999988887765      


Q ss_pred             -C-CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 -G-CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~-~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                       + +|+|||+||......     .+.++..+++|+.++.++.+++...    + ..+||++||...+.+...        
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~~g--------  356 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRG--------  356 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCCTT--------
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCCCC--------
Confidence             3 899999999865432     4556789999999999999998875    4 579999999986664322        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                          ...|+.+|...+.+.+.++    ..|+++..+.||.+..+.....   +.........  
T Consensus       357 --------------------~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~--  411 (454)
T 3u0b_A          357 --------------------QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI---PLATREVGRR--  411 (454)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-------------CHHHHH--
T ss_pred             --------------------CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc---chhhHHHHHh--
Confidence                                4789999998887777766    3599999999999977643221   0000000000  


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                       .    .   .      ...+...+|+++++.+++...  ...| ++++.++
T Consensus       412 -~----~---~------l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          412 -L----N---S------LFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             -S----B---T------TSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred             -h----c---c------ccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence             0    0   0      334567899999999988643  3456 6677654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.81  E-value=8.3e-19  Score=148.51  Aligned_cols=218  Identities=16%  Similarity=0.140  Sum_probs=156.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      ++|++|||||++-||+++++.|++.|.+|.+.+| +... ...+.+...   ..++.++.+|++|++.++++++  +.|+
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r-~~~~-~~~~~~~~~---g~~~~~~~~Dv~d~~~v~~~~~~g~iDi   82 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAAR-RAPD-ETLDIIAKD---GGNASALLIDFADPLAAKDSFTDAGFDI   82 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCCH-HHHHHHHHT---TCCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeC-CcHH-HHHHHHHHh---CCcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence            6799999999999999999999999999999999 7543 333334332   3478999999999988887775  5899


Q ss_pred             EEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETC  153 (341)
Q Consensus        83 Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~  153 (341)
                      +||+||......     .++++..+++|+.++..+.+++.    +.++-.++|++||.....+...              
T Consensus        83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~--------------  148 (247)
T 4hp8_A           83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR--------------  148 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS--------------
T ss_pred             EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC--------------
Confidence            999999765432     56678999999999999888753    3332469999999875543222              


Q ss_pred             CCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccc
Q 019415          154 YTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVY  229 (341)
Q Consensus       154 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (341)
                                    ...|+.||.....+.+.++ +   +|+++..+-||.|-.+.....  ..  -....+.+....+  
T Consensus       149 --------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~--~~--~~~~~~~~~~~~P--  208 (247)
T 4hp8_A          149 --------------VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEAL--RA--DAARNKAILERIP--  208 (247)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH--HT--SHHHHHHHHTTCT--
T ss_pred             --------------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhc--cc--CHHHHHHHHhCCC--
Confidence                          4689999999999888876 3   599999999999965522110  00  0111111111110  


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                                 ..-+-..+|+|.++++++...  -..| ++.+.++
T Consensus       209 -----------lgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          209 -----------AGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             -----------TSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -----------CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence                       223566899999999988643  2456 5555443

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.80  E-value=1.3e-20  Score=168.39  Aligned_cols=178  Identities=11%  Similarity=0.090  Sum_probs=125.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecCCCCchhhhhH-hhhCCCCCCceEEEecCCCChHHHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-------IVHTTLRPNLEDKSKVDL-LKSLPGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      ++|||+||||+||||++++..|++.|+       +|+++++ .... .+... ...+..  ..+.++ +|+.+.+++.++
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~-~~~~-~~~~g~~~dl~~--~~~~~~-~di~~~~~~~~a   77 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI-PQAM-KALEGVVMELED--CAFPLL-AGLEATDDPKVA   77 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC-GGGH-HHHHHHHHHHHT--TTCTTE-EEEEEESCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeC-CCch-hhccchhhhhhc--cccccc-CCeEeccChHHH
Confidence            358999999999999999999999986       8999877 4311 11111 111111  011223 577666678888


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCC
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYT  155 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~  155 (341)
                      ++++|+|||+||...... ...+++++.|+.++.++++++++.+ ...++|++|+.....           .++.++...
T Consensus        78 ~~~~D~Vih~Ag~~~~~~-~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~-----------~~~~~~~~~  145 (327)
T 1y7t_A           78 FKDADYALLVGAAPRKAG-MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN-----------ALIAYKNAP  145 (327)
T ss_dssp             TTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH-----------HHHHHHTCT
T ss_pred             hCCCCEEEECCCcCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh-----------HHHHHHHcC
Confidence            999999999999876432 3345889999999999999999974 234788887754111           111111100


Q ss_pred             CCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCC
Q 019415          156 PPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLP  207 (341)
Q Consensus       156 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~  207 (341)
                      .        ..|.+.|+.+|..+|++...++ ..|++.+++|+++|||++...
T Consensus       146 ~--------~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~~  190 (327)
T 1y7t_A          146 G--------LNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSST  190 (327)
T ss_dssp             T--------SCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSSTT
T ss_pred             C--------CChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCCe
Confidence            0        1245789999999999999888 569999999999999987643

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.79  E-value=2.3e-18  Score=160.92  Aligned_cols=205  Identities=16%  Similarity=0.102  Sum_probs=153.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++++|||||+|.||.++++.|+++|+ .|+++.| +..+......+ ..+......+.++.+|++|++.+.++++     
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R-~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSR-RGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEES-SGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeC-CCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            37899999999999999999999998 7888888 65432222222 2222233579999999999999999886     


Q ss_pred             -CCCEEEEeccCC-ccc-----cchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPL-QHI-----DGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 -~~d~Vi~~a~~~-~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                       .+|+|||+||.. ...     ..+.++..+++|+.++.++.+++...+ .++||++||...+.+...            
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~g------------  384 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSGG------------  384 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCTT------------
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCCC------------
Confidence             379999999986 321     145567899999999999999999987 899999999987765432            


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcccccc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQT  231 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (341)
                                      ...|+.+|...+.+.+.+...|++++.+.||.+.+.+....       ......+...      
T Consensus       385 ----------------~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~-------~~~~~~l~~~------  435 (496)
T 3mje_A          385 ----------------QPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATD-------PEVHDRLVRQ------  435 (496)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC-------------CHHHHHT------
T ss_pred             ----------------cHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccC-------hHHHHHHHhc------
Confidence                            47899999999999887777799999999999876543221       0011111111      


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                               ....+..++.++++..++....
T Consensus       436 ---------g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          436 ---------GVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             ---------TEEEECHHHHHHHHHHHHHHTC
T ss_pred             ---------CCCCCCHHHHHHHHHHHHcCCC
Confidence                     2335678999999999987554

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.79  E-value=3.8e-18  Score=146.16  Aligned_cols=214  Identities=15%  Similarity=0.156  Sum_probs=140.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEE-e--cCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHH-HHHh---c
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-L--RPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTF-ENAI---Q   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~-~~~~---~   78 (341)
                      +|++|||||+|+||+++++.|+++|++|+++ .  | +.......  ...+    .+..+.  |..+.+.+ +++.   .
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r-~~~~~~~~--~~~~----~~~~~~--~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFA-DAAERQRF--ESEN----PGTIAL--AEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGG-SHHHHHHH--HHHS----TTEEEC--CCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcC-CHHHHHHH--HHHh----CCCccc--CHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999998 6  8 65332211  1122    122222  44443332 2222   3


Q ss_pred             CCCEEEEeccCCcc---c-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQH---I-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~---~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                      ++|++||+||....   .     ..+.++..+++|+.++.++++++.    +.+ ..++|++||..+..+..        
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~--------  142 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLA--------  142 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCT--------
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCC--------
Confidence            68999999997544   1     145567899999999999988875    444 57999999987544321        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchh-hhhHhh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSV-IGGLCQ  221 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~-~~~~~~  221 (341)
                                          ....|+.||...+.+.+.++ +   .|+++.+++||.+..+.....   .... ......
T Consensus       143 --------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~  199 (244)
T 1zmo_A          143 --------------------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPT---SDWENNPELRE  199 (244)
T ss_dssp             --------------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCH---HHHHHCHHHHH
T ss_pred             --------------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc---ccccchHHHHH
Confidence                                14689999999999998876 3   489999999999966532000   0000 000111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      +...     ...       ...+...+|+|+++..++....  ..| .+.+.++
T Consensus       200 ~~~~-----~~p-------~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          200 RVDR-----DVP-------LGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HHHH-----HCT-------TCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             HHhc-----CCC-------CCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence            1000     000       2347789999999999987533  345 5566554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.78  E-value=1.2e-17  Score=143.74  Aligned_cols=218  Identities=17%  Similarity=0.149  Sum_probs=149.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||++-||+++++.|++.|++|.+.+| +...            ......++++|+++++++.++++      
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~------------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTAR-ARPE------------GLPEELFVEADLTTKEGCAIVAEATRQRL   76 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEES-SCCT------------TSCTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEEC-Cchh------------CCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999 6432            11234578999999988777664      


Q ss_pred             -CCCEEEEeccCCccc-----c--chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHI-----D--GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~-----~--~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       +.|++||+||.....     .  .+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+.+.       
T Consensus        77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~-------  148 (261)
T 4h15_A           77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPE-------  148 (261)
T ss_dssp             SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-------
T ss_pred             CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCC-------
Confidence             589999999864321     1  45678899999999988877653    444 479999999875443211       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.||...+.+.+.++ +   +|+++..+.||.|-.+....      ......+..
T Consensus       149 --------------------~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~------~~~~~~~~~  202 (261)
T 4h15_A          149 --------------------STTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVR------LAERLAKQA  202 (261)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH------HHHHHHHHT
T ss_pred             --------------------ccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhh------hhHHHHHhh
Confidence                                14789999999998888877 3   59999999999995542110      011111100


Q ss_pred             hcCcc----cccc-ccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          223 TNNEY----VYQT-LRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       223 ~~~~~----~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      .....    .... ...+    ...-+...+|+|+++++++...  ...| ++.+.++-
T Consensus       203 ~~~~~~~~~~~~~~~~~~----PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          203 GTDLEGGKKIIMDGLGGI----PLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             TCCHHHHHHHHHHHTTCC----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ccchhhHHHHHHHHhcCC----CCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            00000    0000 0000    0233677999999999988542  2456 66776553

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.78  E-value=3.8e-18  Score=151.74  Aligned_cols=206  Identities=14%  Similarity=0.045  Sum_probs=142.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC------chhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHh
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE------DKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      ++|+||||||+|+||+++++.|+++|++|++.+| ...      +..+.+.. ..+...  +. ...+|+.+.+++.+++
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~-~~~~~~~~R~~~~~~~~~~~l~~~--~~-~~~~D~~~~~~~~~~~   83 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDL-GGDFKGVGKGSSAADKVVEEIRRR--GG-KAVANYDSVEAGEKLV   83 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-CBCTTSCBCCSHHHHHHHHHHHHT--TC-EEEEECCCGGGHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcC-CcccccccCCHHHHHHHHHHHHhh--CC-eEEEeCCCHHHHHHHH
Confidence            4578999999999999999999999999999755 321      11122111 111111  11 2357999987666554


Q ss_pred             c-------CCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCC
Q 019415           78 Q-------GCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        78 ~-------~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                      +       ++|++||+||.....     ..+.++..+++|+.++.++++++    ++.+ ..+||++||....++..   
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~---  159 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF---  159 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCC---
Confidence            3       689999999976542     14556789999999999988887    3445 58999999987665422   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhh
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIG  217 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~  217 (341)
                                               ....|+.||...+.+.+.++ +   .|+++.+++||.+ .+.   .       ..
T Consensus       160 -------------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~---~-------~~  203 (319)
T 1gz6_A          160 -------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRM---T-------ET  203 (319)
T ss_dssp             -------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STT---T-------GG
T ss_pred             -------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccc---c-------cc
Confidence                                     14789999999999998876 3   4899999999986 321   1       00


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-CCc-eEEEecc
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MSG-RFFCTNV  272 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g-~~n~~~~  272 (341)
                      ..          .  ..      ...++..+|+|.++++++..+. ..| .|++.++
T Consensus       204 ~~----------~--~~------~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          204 VM----------P--ED------LVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             GS----------C--HH------HHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             cC----------C--hh------hhccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence            00          0  00      1234678999999999887543 345 6677665

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.76  E-value=4.8e-17  Score=143.44  Aligned_cols=223  Identities=13%  Similarity=0.073  Sum_probs=144.2

Q ss_pred             CCcEEEEecCc--chHHHHHHHHHHHCCCeEEEEecCCCCc--------hhhhhHhhhCCCCC--CceEEEecC------
Q 019415            5 SNFKVCVTGGE--GFVGSWLIKKLLDKGYIVHTTLRPNLED--------KSKVDLLKSLPGAE--TRLIFFEAE------   66 (341)
Q Consensus         5 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~D------   66 (341)
                      +++++|||||+  |.||+++++.|++.|++|++++| +...        ..+.+.+..+....  .....+.+|      
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTW-VPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEE-HHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeec-cccchhhhhhhhhhHhhhhhhhccccccccccccccceeccch
Confidence            45789999999  99999999999999999999887 4210        01111121211100  012344443      


Q ss_pred             --CCC------------hHHHHHHh-------cCCCEEEEeccCCc----c-c--cchhHhHhhhhhhhHHHHHHHHHHh
Q 019415           67 --IYD------------PDTFENAI-------QGCDFVFHVATPLQ----H-I--DGYLYKNVVEACVGAAKKIASFCVK  118 (341)
Q Consensus        67 --l~~------------~~~~~~~~-------~~~d~Vi~~a~~~~----~-~--~~~~~~~~~~~nv~~~~~l~~~~~~  118 (341)
                        +.+            ++++.+++       .++|++||+||...    . .  ..+.++..+++|+.++.++++++..
T Consensus        86 ~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  165 (297)
T 1d7o_A           86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP  165 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence              221            33344433       36899999998532    1 1  1455678999999999999999976


Q ss_pred             cC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceE
Q 019415          119 SG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEV  192 (341)
Q Consensus       119 ~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~  192 (341)
                      .- .-.++|++||.....+...                           ....|+.||...+.+.+.++ +    .|+++
T Consensus       166 ~m~~~g~iv~isS~~~~~~~~~---------------------------~~~~Y~asKaa~~~~~~~la~e~~~~~gi~v  218 (297)
T 1d7o_A          166 IMNPGGASISLTYIASERIIPG---------------------------YGGGMSSAKAALESDTRVLAFEAGRKQNIRV  218 (297)
T ss_dssp             GEEEEEEEEEEECGGGTSCCTT---------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred             HhccCceEEEEeccccccCCCC---------------------------cchHHHHHHHHHHHHHHHHHHHhCcccCcEE
Confidence            51 0258999999875442211                           01479999999999998876 4    48999


Q ss_pred             EEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEE
Q 019415          193 VALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFC  269 (341)
Q Consensus       193 ~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~  269 (341)
                      ..++||.+.++.....    .....+...+....    +         ...+..++|+|+++.+++...  ...| .+++
T Consensus       219 n~v~PG~v~T~~~~~~----~~~~~~~~~~~~~~----p---------~~r~~~pedvA~~v~~l~s~~~~~itG~~i~v  281 (297)
T 1d7o_A          219 NTISAGPLGSRAAKAI----GFIDTMIEYSYNNA----P---------IQKTLTADEVGNAAAFLVSPLASAITGATIYV  281 (297)
T ss_dssp             EEEEECCCBCCCSSCC----SHHHHHHHHHHHHS----S---------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             EEEeccccccchhhhc----cccHHHHHHhhccC----C---------CCCCCCHHHHHHHHHHHhCccccCCCCCEEEE
Confidence            9999999998754321    11122222211110    0         234678999999999988642  2356 6777


Q ss_pred             ecc
Q 019415          270 TNV  272 (341)
Q Consensus       270 ~~~  272 (341)
                      .++
T Consensus       282 dgG  284 (297)
T 1d7o_A          282 DNG  284 (297)
T ss_dssp             STT
T ss_pred             CCC
Confidence            665

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.75  E-value=2.9e-17  Score=155.17  Aligned_cols=227  Identities=14%  Similarity=0.051  Sum_probs=157.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCe-EEEE-ecCCCCc----------hhhhh-HhhhCCCCCCceEEEecCCCChH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYI-VHTT-LRPNLED----------KSKVD-LLKSLPGAETRLIFFEAEIYDPD   71 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~~----------~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~   71 (341)
                      +++++|||||+|.||.++++.|+++|++ |+++ +| +...          ....+ ....+......+.++.+|++|++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTP-SGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECC-CC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCC-CCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            4578999999999999999999999988 5555 78 6422          11111 11112122347999999999999


Q ss_pred             HHHHHhcC------CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcCC----cCEEEEecccccccC
Q 019415           72 TFENAIQG------CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSGT----VKRLIYTASVLCASP  136 (341)
Q Consensus        72 ~~~~~~~~------~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~~----~~~~I~~Ss~~~~~~  136 (341)
                      .+.++++.      +|+|||+||......     .+.++..+++|+.++.++.+++.....    ..+||++||...+.+
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g  408 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG  408 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence            99999864      699999999765422     455678999999999999999877641    579999999987664


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          137 LKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       137 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                      ...                            ...|+.+|...+.+...+...|++++++.||.+ +.+....    .   
T Consensus       409 ~~g----------------------------~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~----~---  452 (525)
T 3qp9_A          409 GAG----------------------------QGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVTE----G---  452 (525)
T ss_dssp             CTT----------------------------CHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGGS----S---
T ss_pred             CCC----------------------------CHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccccccc----h---
Confidence            322                            478999999999887766666999999999998 2111000    0   


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhC
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNY  287 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~  287 (341)
                      .....+...               ....+..+++++++..++.....    .+.-..+.+..+...+....
T Consensus       453 ~~~~~~~~~---------------g~~~l~pee~a~~l~~~l~~~~~----~v~v~~~dw~~~~~~~~~~~  504 (525)
T 3qp9_A          453 ATGERLRRL---------------GLRPLAPATALTALDTALGHGDT----AVTIADVDWSSFAPGFTTAR  504 (525)
T ss_dssp             HHHHHHHHT---------------TBCCBCHHHHHHHHHHHHHHTCS----EEEECCBCHHHHHHHHHSSS
T ss_pred             hhHHHHHhc---------------CCCCCCHHHHHHHHHHHHhCCCC----eEEEEeCCHHHHHhhccccC
Confidence            011111111               33467799999999999975432    12223456666666665443

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.69  E-value=5.6e-16  Score=138.01  Aligned_cols=229  Identities=11%  Similarity=0.014  Sum_probs=122.9

Q ss_pred             CCcEEEEecC--cchHHHHHHHHHHHCCCeEEEEecCCC--------CchhhhhHh------------hhCCCCC---Cc
Q 019415            5 SNFKVCVTGG--EGFVGSWLIKKLLDKGYIVHTTLRPNL--------EDKSKVDLL------------KSLPGAE---TR   59 (341)
Q Consensus         5 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~~~------------~~~~~~~---~~   59 (341)
                      +++++|||||  +|.||+++++.|++.|++|++++| +.        ....+.+..            ..+....   ..
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTW-PPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEEC-HHHHHHHHC--------------------------------CC
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEec-cccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            4578999999  899999999999999999999887 42        000111110            0000000   01


Q ss_pred             eEEEecCC--CC------------------hHHHHHHh-------cCCCEEEEeccCCc----c-c--cchhHhHhhhhh
Q 019415           60 LIFFEAEI--YD------------------PDTFENAI-------QGCDFVFHVATPLQ----H-I--DGYLYKNVVEAC  105 (341)
Q Consensus        60 ~~~~~~Dl--~~------------------~~~~~~~~-------~~~d~Vi~~a~~~~----~-~--~~~~~~~~~~~n  105 (341)
                      ..++.+|+  .+                  ++.+.+++       .++|++||+||...    . .  ..+.++..+++|
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            24454443  22                  22344443       36899999998642    1 1  145567899999


Q ss_pred             hhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHh
Q 019415          106 VGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLS  184 (341)
Q Consensus       106 v~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  184 (341)
                      +.++.++++++...- .-.++|++||.....+...                           ....|+.||...+.+.+.
T Consensus       167 ~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~---------------------------~~~~Y~asKaal~~l~~~  219 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPG---------------------------YGGGMSSAKAALESDCRT  219 (319)
T ss_dssp             THHHHHHHHHHGGGEEEEEEEEEEEECC---------------------------------------------THHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCceEEEEeccccccccCc---------------------------cchhhHHHHHHHHHHHHH
Confidence            999999999987651 0158999999875442211                           014799999999988888


Q ss_pred             hc-c----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhc
Q 019415          185 YG-S----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCME  259 (341)
Q Consensus       185 ~~-~----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~  259 (341)
                      ++ +    +|+++..++||.|..+.....  .......+.......   +.....      ...+...+|+|+++++++.
T Consensus       220 la~el~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~---~~~~~p------~~r~~~peevA~~v~~L~s  288 (319)
T 2ptg_A          220 LAFEAGRARAVRVNCISAGPLKSRAASAI--GKAGDKTFIDLAIDY---SEANAP------LQKELESDDVGRAALFLLS  288 (319)
T ss_dssp             HHHHHHHHHCCEEEEEEECCCC------------------------------------------CCCHHHHHHHHHHHTS
T ss_pred             HHHHhccccCeeEEEEeeCCccChhhhhc--ccccchhhHHHHHHH---HhccCC------CCCCCCHHHHHHHHHHHhC
Confidence            76 3    489999999999976532211  000000000000000   000000      2235679999999999987


Q ss_pred             CC--CCCc-eEEEecc
Q 019415          260 KP--SMSG-RFFCTNV  272 (341)
Q Consensus       260 ~~--~~~g-~~n~~~~  272 (341)
                      ..  ...| .+.+.++
T Consensus       289 ~~~~~itG~~i~vdGG  304 (319)
T 2ptg_A          289 PLARAVTGATLYVDNG  304 (319)
T ss_dssp             GGGTTCCSCEEEESTT
T ss_pred             cccCCccCCEEEECCC
Confidence            42  3456 5566554

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.68  E-value=5.6e-16  Score=149.36  Aligned_cols=203  Identities=11%  Similarity=-0.013  Sum_probs=136.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC------chhhh----hHhhhCCCCCCceEEEecCCCChHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE------DKSKV----DLLKSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      +++++|||||+|.||+++++.|+++|++|++++| +..      +....    +.+...   ...   ..+|+.+.+++.
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r-~~~~~~~~~~~~~~~~~~~~i~~~---~~~---~~~D~~d~~~~~   90 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDL-GGTHSGDGASQRAADIVVDEIRKA---GGE---AVADYNSVIDGA   90 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC---------------CHHHHHHHHHHT---TCC---EEECCCCGGGHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CcccccccCCHHHHHHHHHHHHHh---CCe---EEEEeCCHHHHH
Confidence            4679999999999999999999999999999866 321      11111    122221   112   347999988887


Q ss_pred             HHhc-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCC
Q 019415           75 NAIQ-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLK  138 (341)
Q Consensus        75 ~~~~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~  138 (341)
                      ++++       ++|++||+||......     .+.++..+++|+.++.++++++    ++.+ ..++|++||....++..
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~~  169 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNF  169 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCC
Confidence            7765       5899999999765421     4556789999999999999988    4444 57999999988666432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCch
Q 019415          139 EDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVS  214 (341)
Q Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~  214 (341)
                      .                            ...|+.||...+.+.+.++ +   .|+++..+.|+.+- +.....      
T Consensus       170 ~----------------------------~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~~~~------  214 (613)
T 3oml_A          170 G----------------------------QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMTEGI------  214 (613)
T ss_dssp             T----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCC------
T ss_pred             C----------------------------ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhhhhc------
Confidence            2                            4789999999999998887 3   48999999998641 110000      


Q ss_pred             hhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC-CCc-eEEEecc
Q 019415          215 VIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MSG-RFFCTNV  272 (341)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~g-~~n~~~~  272 (341)
                      ...                .      ....+..+|+|.++..++.... ..| ++++.++
T Consensus       215 ~~~----------------~------~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG  252 (613)
T 3oml_A          215 LPD----------------I------LFNELKPKLIAPVVAYLCHESCEDNGSYIESAAG  252 (613)
T ss_dssp             CCH----------------H------HHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred             cch----------------h------hhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCC
Confidence            000                0      1224468899999999887542 345 5555543

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.67  E-value=1e-15  Score=136.05  Aligned_cols=227  Identities=15%  Similarity=0.072  Sum_probs=140.2

Q ss_pred             CCcEEEEecC--cchHHHHHHHHHHHCCCeEEEEecCCCC--------chhhhhHhhhCCCCC--CceEEEecCC-----
Q 019415            5 SNFKVCVTGG--EGFVGSWLIKKLLDKGYIVHTTLRPNLE--------DKSKVDLLKSLPGAE--TRLIFFEAEI-----   67 (341)
Q Consensus         5 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~~~~~~--~~~~~~~~Dl-----   67 (341)
                      +++++|||||  +|.||+++++.|++.|++|++++| +..        ...+.+.+..+....  ....++.+|+     
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTW-PPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEEC-HHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEec-ccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            4578999999  899999999999999999999887 531        001122222221100  0124444443     


Q ss_pred             -------C--------ChHHHHHHh-------cCCCEEEEeccCCc----c-c--cchhHhHhhhhhhhHHHHHHHHHHh
Q 019415           68 -------Y--------DPDTFENAI-------QGCDFVFHVATPLQ----H-I--DGYLYKNVVEACVGAAKKIASFCVK  118 (341)
Q Consensus        68 -------~--------~~~~~~~~~-------~~~d~Vi~~a~~~~----~-~--~~~~~~~~~~~nv~~~~~l~~~~~~  118 (341)
                             +        |++.+.+++       .++|++||+||...    . .  ..+.++..+++|+.++.++++++..
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                   2        133444443       36899999999642    1 1  1455678899999999999999866


Q ss_pred             cC-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceE
Q 019415          119 SG-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEV  192 (341)
Q Consensus       119 ~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~  192 (341)
                      .- .-.++|++||.....+...                           ....|+.||...+.+.+.++ +    .|+++
T Consensus       167 ~m~~~g~Iv~isS~~~~~~~~~---------------------------~~~~Y~asKaal~~l~~~la~el~~~~gIrv  219 (315)
T 2o2s_A          167 IMNEGGSAVTLSYLAAERVVPG---------------------------YGGGMSSAKAALESDTRTLAWEAGQKYGVRV  219 (315)
T ss_dssp             TEEEEEEEEEEEEGGGTSCCTT---------------------------CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             HHhcCCEEEEEecccccccCCC---------------------------ccHHHHHHHHHHHHHHHHHHHHhCcccCeEE
Confidence            41 0158999999875442211                           01479999999999988876 3    58999


Q ss_pred             EEEecCceeCCCCCCCC--CCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eE
Q 019415          193 VALALGVVAGDTNLPYS--STPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RF  267 (341)
Q Consensus       193 ~vlRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~  267 (341)
                      ..++||.|..+......  ....+...+...+...   . +         ...+...+|+|+++++++...  ...| .+
T Consensus       220 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~-p---------~~r~~~pedvA~~v~~L~s~~~~~itG~~i  286 (315)
T 2o2s_A          220 NAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNN---A-P---------LRRDLHSDDVGGAALFLLSPLARAVSGVTL  286 (315)
T ss_dssp             EEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHH---S-S---------SCCCCCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             EEEecccccchhhhhccccccchhHHHHHHHHhcc---C-C---------CCCCCCHHHHHHHHHHHhCchhccCcCCEE
Confidence            99999998654211000  0000111111111000   0 0         223567999999999988642  2456 45


Q ss_pred             EEecc
Q 019415          268 FCTNV  272 (341)
Q Consensus       268 n~~~~  272 (341)
                      .+.++
T Consensus       287 ~vdGG  291 (315)
T 2o2s_A          287 YVDNG  291 (315)
T ss_dssp             EESTT
T ss_pred             EECCC
Confidence            55544

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.65  E-value=2.7e-15  Score=134.07  Aligned_cols=169  Identities=8%  Similarity=0.004  Sum_probs=121.0

Q ss_pred             CcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCC---------CchhhhhHhhhC-CCCCCceEEEecCCCCh--H
Q 019415            6 NFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNL---------EDKSKVDLLKSL-PGAETRLIFFEAEIYDP--D   71 (341)
Q Consensus         6 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~--~   71 (341)
                      ++++|||||++  .||.++++.|++.|++|++.+| +.         ............ ......+.++.+|+++.  +
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~-~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIW-PPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEC-HHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEec-CccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            47899999875  9999999999999999997776 43         111111111111 11123578899999876  5


Q ss_pred             ------------------HHHHHhc-------CCCEEEEeccCCc--cc-----cchhHhHhhhhhhhHHHHHHHHHHhc
Q 019415           72 ------------------TFENAIQ-------GCDFVFHVATPLQ--HI-----DGYLYKNVVEACVGAAKKIASFCVKS  119 (341)
Q Consensus        72 ------------------~~~~~~~-------~~d~Vi~~a~~~~--~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~  119 (341)
                                        ++.++++       ++|++||+||...  ..     ..+.++..+++|+.++..+.+++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              5555543       5899999999632  11     14556789999999999999998765


Q ss_pred             C-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhh-hHHHhHHHHHHHHHhhc----c-CCceE
Q 019415          120 G-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLR-VYIESKMKSEKELLSYG----S-SGLEV  192 (341)
Q Consensus       120 ~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~----~-~~~~~  192 (341)
                      - .-.++|++||.....+...                            .. .|+.||...+.+.+.++    . .|+++
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~----------------------------~~~~Y~asKaal~~~~~~la~el~~~~gI~v  212 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPG----------------------------YGGGMSSAKAALESDTRVLAYHLGRNYNIRI  212 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTT----------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred             HhhCCeEEEEeCccccCCCCc----------------------------chHHHHHHHHHHHHHHHHHHHHhCCccCeEE
Confidence            2 0148999999875443211                            23 79999999998888776    3 58999


Q ss_pred             EEEecCceeCC
Q 019415          193 VALALGVVAGD  203 (341)
Q Consensus       193 ~vlRp~~v~G~  203 (341)
                      ..+.||.|..+
T Consensus       213 n~v~PG~v~T~  223 (329)
T 3lt0_A          213 NTISAGPLKSR  223 (329)
T ss_dssp             EEEEECCCCCH
T ss_pred             EEEecceeech
Confidence            99999998655

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.57  E-value=4.8e-14  Score=139.39  Aligned_cols=206  Identities=17%  Similarity=0.128  Sum_probs=148.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHH-HCCC-eEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhcC--
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLL-DKGY-IVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQG--   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   79 (341)
                      +++.+|||||+|-||.++++.|+ ++|. .|++++| +.......+ ....+......+.++.+|++|+++++++++.  
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R-~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSR-RGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEES-SGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEecc-CccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            45789999999999999999999 7898 4888899 743322222 2222222235789999999999999998863  


Q ss_pred             ----CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 ----CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ----~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                          +|+|||+|+......     .+.++..+++|+.++.++.+++ ... . +||++||.....+...           
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~-~~~-l-~iV~~SS~ag~~g~~g-----------  673 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELI-DPD-V-ALVLFSSVSGVLGSGG-----------  673 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHS-CTT-S-EEEEEEETHHHHTCSS-----------
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHH-hhC-C-EEEEEccHHhcCCCCC-----------
Confidence                699999999765432     4567789999999999999998 333 4 8999999987665433           


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQ  230 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (341)
                                       ...|+.+|...+.+.+.+...|++++.+-||.+-..+....     ........+...     
T Consensus       674 -----------------~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~-----~~~~~~~~~~~~-----  726 (795)
T 3slk_A          674 -----------------QGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMAST-----LREAEQDRLARS-----  726 (795)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHH-----HHHHHHHHHHHT-----
T ss_pred             -----------------CHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhcc-----ccHHHHHHHHhc-----
Confidence                             47899999998888887777799999999998854321000     000111111111     


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                                ....+..+++...+..++....
T Consensus       727 ----------g~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          727 ----------GLLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             ----------TBCCCCHHHHHHHHHHHHTSSC
T ss_pred             ----------CCCCCCHHHHHHHHHHHHhCCC
Confidence                      3445678889999888887644

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.55  E-value=2.3e-13  Score=141.59  Aligned_cols=205  Identities=13%  Similarity=0.057  Sum_probs=140.0

Q ss_pred             CCcEEEEecCcch-HHHHHHHHHHHCCCeEEEEe-cCCCCchhh-hhHh-hhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            5 SNFKVCVTGGEGF-VGSWLIKKLLDKGYIVHTTL-RPNLEDKSK-VDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         5 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~-~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      +++++|||||+|. ||.++++.|++.|++|++++ | +...... .+.+ .........+.++.+|++|.+++.++++  
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R-~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSR-FSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESS-CCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecC-CHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            4578999999998 99999999999999999984 5 4432211 1222 1222223478999999999988887763  


Q ss_pred             -----------CCCEEEEeccCCccc-c-------chhHhHhhhhhhhHHHHHHHHHHhcCC-----cCEEEEecccccc
Q 019415           79 -----------GCDFVFHVATPLQHI-D-------GYLYKNVVEACVGAAKKIASFCVKSGT-----VKRLIYTASVLCA  134 (341)
Q Consensus        79 -----------~~d~Vi~~a~~~~~~-~-------~~~~~~~~~~nv~~~~~l~~~~~~~~~-----~~~~I~~Ss~~~~  134 (341)
                                 ++|++||+||..... .       .+.++..+++|+.++..++++++....     -.+||++||....
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~  832 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  832 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence                       489999999976443 1       244578999999999999998743321     2589999998654


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHH-HHhhc-cC--CceEEEEecCceeCCCCCCCCC
Q 019415          135 SPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKE-LLSYG-SS--GLEVVALALGVVAGDTNLPYSS  210 (341)
Q Consensus       135 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~  210 (341)
                      .+  .                            ...|+.||...+.+ .+.++ +.  .+++..+.||.+.+......  
T Consensus       833 ~g--g----------------------------~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~--  880 (1887)
T 2uv8_A          833 FG--G----------------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA--  880 (1887)
T ss_dssp             SS--C----------------------------BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-------
T ss_pred             cC--C----------------------------CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccccccccc--
Confidence            42  1                            35799999999988 44444 32  39999999999974211110  


Q ss_pred             CCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          211 TPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                       .......   +...               ...+...+|+|.+++.++...
T Consensus       881 -~~~~~~~---~~~~---------------plr~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          881 -NNIIAEG---IEKM---------------GVRTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             -CCTTHHH---HHTT---------------SCCCEEHHHHHHHHHGGGSHH
T ss_pred             -chhHHHH---HHhc---------------CCCCCCHHHHHHHHHHHhCCC
Confidence             0001111   1100               112447999999999998653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.53  E-value=5.5e-13  Score=128.05  Aligned_cols=160  Identities=14%  Similarity=0.045  Sum_probs=118.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCC-CChHHH-H---HHhcC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI-YDPDTF-E---NAIQG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~-~---~~~~~   79 (341)
                      +++.+|||||++-||+++++.|++.|++|++.+| +... ...+.+...   ...+..+.+|+ .+.+.+ +   +.+.+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~-~~~~-~~~~~i~~~---g~~~~~~~~Dv~~~~~~~~~~~~~~~G~  395 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDF-KDAT-KTVDEIKAA---GGEAWPDQHDVAKDSEAIIKNVIDKYGT  395 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECS-SCCH-HHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHHHHSC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeC-ccHH-HHHHHHHhc---CCeEEEEEcChHHHHHHHHHHHHHhcCC
Confidence            4578999999999999999999999999999876 3321 222333332   23567778888 554322 2   22447


Q ss_pred             CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +|++||+||......     .+.++..+++|+.++..+.+++..    .+ -.++|++||.....+...           
T Consensus       396 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~~-----------  463 (604)
T 2et6_A          396 IDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFG-----------  463 (604)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTT-----------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCC-----------
Confidence            999999999754321     456789999999999998887643    33 469999999876553221           


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecC
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALG  198 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~  198 (341)
                                       ...|+.||.....+.+.++ +   +|+++..+.|+
T Consensus       464 -----------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG  498 (604)
T 2et6_A          464 -----------------QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH  498 (604)
T ss_dssp             -----------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             -----------------ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence                             4689999999998888876 3   48999999998

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.52  E-value=4.8e-13  Score=119.96  Aligned_cols=169  Identities=9%  Similarity=-0.044  Sum_probs=122.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHH-CCCeEEEEecCCCCchhh------------hh-HhhhCCCCCCceEEEecCCCCh
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLD-KGYIVHTTLRPNLEDKSK------------VD-LLKSLPGAETRLIFFEAEIYDP   70 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~------------~~-~~~~~~~~~~~~~~~~~Dl~~~   70 (341)
                      .+|++|||||++-||.++++.|++ .|.+|.+++| +......            .. .+..   ....+..+.+|++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~-~~~~~~~~~~~~gwyn~~~~~~~~~~---~G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFF-ERPGEEGKPGTSGWYNSAAFHKFAAQ---KGLYAKSINGDAFSD  121 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEEC-CCCCBTTBCCCHHHHHHHHHHHHHHH---TTCCEEEEESCTTSH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeC-CchhhhhhcccccchhHHHHHHHHHh---cCCceEEEECCCCCH
Confidence            468899999999999999999999 9999999888 6544221            11 1222   224688899999999


Q ss_pred             HHHHHHhc-------CCCEEEEeccCCc---------------c----------------------c--cchhHhHhhhh
Q 019415           71 DTFENAIQ-------GCDFVFHVATPLQ---------------H----------------------I--DGYLYKNVVEA  104 (341)
Q Consensus        71 ~~~~~~~~-------~~d~Vi~~a~~~~---------------~----------------------~--~~~~~~~~~~~  104 (341)
                      +.+.++++       ++|++||+||...               +                      .  ..+.++..+++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            88777664       5899999998641               1                      1  14556788888


Q ss_pred             hhhHHH-HHHHHHHhcCC---cCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHH
Q 019415          105 CVGAAK-KIASFCVKSGT---VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEK  180 (341)
Q Consensus       105 nv~~~~-~l~~~~~~~~~---~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  180 (341)
                      |..+.. .++.++.....   -.++|++||.....+...                          .....|+.||...+.
T Consensus       202 n~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~--------------------------~~~~aY~AaKaal~~  255 (405)
T 3zu3_A          202 MGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDI--------------------------YWNGSIGAAKKDLDQ  255 (405)
T ss_dssp             HSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTT--------------------------TTTSHHHHHHHHHHH
T ss_pred             hchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCC--------------------------ccchHHHHHHHHHHH
Confidence            988776 55555443220   158999999864432211                          112689999999999


Q ss_pred             HHHhhc----cC-CceEEEEecCceeCC
Q 019415          181 ELLSYG----SS-GLEVVALALGVVAGD  203 (341)
Q Consensus       181 ~~~~~~----~~-~~~~~vlRp~~v~G~  203 (341)
                      +.+.++    .. |+++.++-||.+-.+
T Consensus       256 ltrsLA~Ela~~~GIRVNaVaPG~i~T~  283 (405)
T 3zu3_A          256 KVLAIRESLAAHGGGDARVSVLKAVVSQ  283 (405)
T ss_dssp             HHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence            988876    46 899999999998655

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.51  E-value=6.1e-14  Score=141.66  Aligned_cols=167  Identities=16%  Similarity=0.079  Sum_probs=121.2

Q ss_pred             CCcEEEEecCcch-HHHHHHHHHHHCCCeEEEEe-cCCCCchhh-hhHhh-hCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            5 SNFKVCVTGGEGF-VGSWLIKKLLDKGYIVHTTL-RPNLEDKSK-VDLLK-SLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         5 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~-~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      +++++|||||+|. ||.++++.|++.|++|++++ | +...... .+.+. ........+.++.+|+++++++.++++  
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R-~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSR-FSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESS-CSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCC-CHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            3578999999998 99999999999999999984 5 4433221 12221 112223468899999999988887763  


Q ss_pred             -----------CCCEEEEeccCCccc-c-------chhHhHhhhhhhhHHHHHHHHHHhcC-----CcCEEEEecccccc
Q 019415           79 -----------GCDFVFHVATPLQHI-D-------GYLYKNVVEACVGAAKKIASFCVKSG-----TVKRLIYTASVLCA  134 (341)
Q Consensus        79 -----------~~d~Vi~~a~~~~~~-~-------~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~~I~~Ss~~~~  134 (341)
                                 ++|++||+||..... .       .+.++..+++|+.++.+++++++...     .-.+||++||....
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~  633 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  633 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence                       489999999975443 1       24457899999999999998873321     02589999997644


Q ss_pred             cCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHH-HHhhc-cC--CceEEEEecCceeC
Q 019415          135 SPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKE-LLSYG-SS--GLEVVALALGVVAG  202 (341)
Q Consensus       135 ~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~-~~--~~~~~vlRp~~v~G  202 (341)
                      .+  .                            ...|+.||...+.+ .+.++ +.  .+++..+.||.+.+
T Consensus       634 ~G--g----------------------------~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T  675 (1688)
T 2pff_A          634 FG--G----------------------------DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG  675 (1688)
T ss_dssp             SS--C----------------------------BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred             cC--C----------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence            32  1                            35799999999998 44444 22  38888899998874

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.49  E-value=1.2e-12  Score=136.04  Aligned_cols=167  Identities=13%  Similarity=0.055  Sum_probs=121.0

Q ss_pred             CCcEEEEecCcch-HHHHHHHHHHHCCCeEEEEecCCCCchh-hhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            5 SNFKVCVTGGEGF-VGSWLIKKLLDKGYIVHTTLRPNLEDKS-KVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         5 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      +++++|||||+|. ||.++++.|++.|++|+++++.+..... ..+.+ ..+......+.++.+|++|.+++.++++   
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~  730 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY  730 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999 9999999999999999998640332211 11222 2222223478899999999988887763   


Q ss_pred             --------CCCEEEEeccCCccc-c-------chhHhHhhhhhhhHHHHHHHHHHhcC-----CcCEEEEecccccccCC
Q 019415           79 --------GCDFVFHVATPLQHI-D-------GYLYKNVVEACVGAAKKIASFCVKSG-----TVKRLIYTASVLCASPL  137 (341)
Q Consensus        79 --------~~d~Vi~~a~~~~~~-~-------~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~~I~~Ss~~~~~~~  137 (341)
                              ++|++||+||..... .       .+.++.++++|+.++.+++++++...     ...+||++||.....+.
T Consensus       731 ~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~gg  810 (1878)
T 2uv9_A          731 DTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFGN  810 (1878)
T ss_dssp             CSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSSC
T ss_pred             HhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccCC
Confidence                    489999999976443 1       24567899999999999887632211     02589999998654420


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-C--CceEEEEecCcee
Q 019415          138 KEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-S--GLEVVALALGVVA  201 (341)
Q Consensus       138 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-~--~~~~~vlRp~~v~  201 (341)
                                                    ...|+.+|...+.+.+.+. + .  .+++..+.||.+-
T Consensus       811 ------------------------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~  848 (1878)
T 2uv9_A          811 ------------------------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR  848 (1878)
T ss_dssp             ------------------------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred             ------------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence                                          2579999999998876543 2 1  3999999999886

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.45  E-value=1.7e-12  Score=117.43  Aligned_cols=170  Identities=11%  Similarity=-0.032  Sum_probs=121.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHH-CCCeEEEEecCCCCchhh------------h-hHhhhCCCCCCceEEEecCCCCh
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLD-KGYIVHTTLRPNLEDKSK------------V-DLLKSLPGAETRLIFFEAEIYDP   70 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~Dl~~~   70 (341)
                      .+|++|||||++-||.++++.|++ .|++|.+++| +......            . +.+..   ....+..+.+|++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r-~~~~~~~~~~~ag~~n~~a~~~~~~~---~G~~a~~i~~Dvtd~  135 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFF-EKPGTASKAGTAGWYNSAAFDKHAKA---AGLYSKSINGDAFSD  135 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEEC-CCCCCSSSCCCHHHHHHHHHHHHHHH---TTCCEEEEESCTTSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeC-CchhhhhhhcccccchhHHHHHHHHh---cCCcEEEEEecCCCH
Confidence            467899999999999999999999 9999999988 6554221            1 22222   224688899999999


Q ss_pred             HHHHHHh--------cCCCEEEEeccCC-------------c---c-----------------------ccchhHhHhhh
Q 019415           71 DTFENAI--------QGCDFVFHVATPL-------------Q---H-----------------------IDGYLYKNVVE  103 (341)
Q Consensus        71 ~~~~~~~--------~~~d~Vi~~a~~~-------------~---~-----------------------~~~~~~~~~~~  103 (341)
                      +.+++++        .++|++||+||..             .   .                       ...+.++..+.
T Consensus       136 ~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~  215 (422)
T 3s8m_A          136 AARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTIT  215 (422)
T ss_dssp             HHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHH
Confidence            8766554        4589999999862             0   0                       11344567777


Q ss_pred             hhhhHHH-HHHHHHHhcC---CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHH
Q 019415          104 ACVGAAK-KIASFCVKSG---TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSE  179 (341)
Q Consensus       104 ~nv~~~~-~l~~~~~~~~---~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E  179 (341)
                      +|..+.. .++.++....   .-.++|++||.....+...                          .....|+.||...+
T Consensus       216 Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~--------------------------~~~~aY~ASKaAl~  269 (422)
T 3s8m_A          216 VMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI--------------------------YWHGALGKAKVDLD  269 (422)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH--------------------------HTSHHHHHHHHHHH
T ss_pred             hhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC--------------------------ccchHHHHHHHHHH
Confidence            7777664 5566654332   0258999999864332111                          01268999999999


Q ss_pred             HHHHhhc-c---CCceEEEEecCceeCCC
Q 019415          180 KELLSYG-S---SGLEVVALALGVVAGDT  204 (341)
Q Consensus       180 ~~~~~~~-~---~~~~~~vlRp~~v~G~~  204 (341)
                      .+.+.++ +   .|+++.++.||.|-.+.
T Consensus       270 ~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          270 RTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             HHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            9988887 3   49999999999996653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.45  E-value=2.2e-12  Score=117.59  Aligned_cols=172  Identities=9%  Similarity=-0.075  Sum_probs=120.3

Q ss_pred             CCcEEEEecCcchHHHH--HHHHHHHCCCeEEEEecCCCCchhh---------hhHhhh-CCCCCCceEEEecCCCChHH
Q 019415            5 SNFKVCVTGGEGFVGSW--LIKKLLDKGYIVHTTLRPNLEDKSK---------VDLLKS-LPGAETRLIFFEAEIYDPDT   72 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~Dl~~~~~   72 (341)
                      .++++|||||++-||.+  +++.|++.|++|+++.| +......         .+.+.. .......+.++.+|++++++
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSY-ETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEEC-CCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEec-CcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            46899999999999999  99999999999999998 6543210         111111 11123468899999999988


Q ss_pred             HHHHhc-------CCCEEEEeccCCc----------------c-----------------------ccchhHhHhhhhhh
Q 019415           73 FENAIQ-------GCDFVFHVATPLQ----------------H-----------------------IDGYLYKNVVEACV  106 (341)
Q Consensus        73 ~~~~~~-------~~d~Vi~~a~~~~----------------~-----------------------~~~~~~~~~~~~nv  106 (341)
                      ++++++       ++|++||+||...                .                       ...+.++..+.+|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            777664       5899999998740                0                       01344556677777


Q ss_pred             hHHH-HHHHHHHhcCC---cCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHH
Q 019415          107 GAAK-KIASFCVKSGT---VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKEL  182 (341)
Q Consensus       107 ~~~~-~l~~~~~~~~~---~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~  182 (341)
                      .+.. .++.++...+.   -.++|++||.+...+...                          .....|+.||...+.+.
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~--------------------------~~~~aY~ASKaAL~~lt  271 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKI--------------------------YREGTIGIAKKDLEDKA  271 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTT--------------------------TTTSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCc--------------------------cccHHHHHHHHHHHHHH
Confidence            6655 55555544320   247999999764332211                          11378999999999998


Q ss_pred             Hhhc----c-CCceEEEEecCceeCC
Q 019415          183 LSYG----S-SGLEVVALALGVVAGD  203 (341)
Q Consensus       183 ~~~~----~-~~~~~~vlRp~~v~G~  203 (341)
                      +.++    . .|+++.++.||.|-.+
T Consensus       272 rsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          272 KLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             HHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHhCCccCeEEEEEECCcCcCh
Confidence            8887    3 5899999999998654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.40  E-value=5.5e-12  Score=121.12  Aligned_cols=158  Identities=15%  Similarity=0.052  Sum_probs=112.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC---------Cchhh-hhHhhhCCCCCCceEEEecCCCChHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL---------EDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      +++.+|||||++-||+++++.|+++|++|++.+| +.         ..... .+.+...   .....   .|+.|.++.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~-~~~~~~~gr~~~~~~~~~~~i~~~---g~~~~---~d~~d~~~~~   79 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDL-GGALNGQGGNSKAADVVVDEIVKN---GGVAV---ADYNNVLDGD   79 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC------------CHHHHHHHHHHHT---TCEEE---EECCCTTCHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeC-CccccccccchHHHHHHHHHHHhc---CCeEE---EEcCCHHHHH
Confidence            4578999999999999999999999999999877 54         11111 1222221   11222   4666553333


Q ss_pred             H-------HhcCCCEEEEeccCCccc-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCC
Q 019415           75 N-------AIQGCDFVFHVATPLQHI-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLK  138 (341)
Q Consensus        75 ~-------~~~~~d~Vi~~a~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~  138 (341)
                      +       .+.++|++||+||.....     ..+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+..
T Consensus        80 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~  158 (604)
T 2et6_A           80 KIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNF  158 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCC
Confidence            2       234699999999975432     155678999999999999887764    333 46999999987665432


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecC
Q 019415          139 EDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALG  198 (341)
Q Consensus       139 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~  198 (341)
                      .                            ...|+.||.....+.+.++ +   +|+++..+.|+
T Consensus       159 ~----------------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg  194 (604)
T 2et6_A          159 G----------------------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL  194 (604)
T ss_dssp             T----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             C----------------------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence            2                            4689999999999888886 3   48999999996

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.32  E-value=1.2e-11  Score=92.83  Aligned_cols=97  Identities=21%  Similarity=0.303  Sum_probs=77.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++|+|+|+|+ |++|+++++.|.+.| ++|++++| +..+   .+.+..     .++.++.+|+.+.+.+.++++++|+|
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r-~~~~---~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~d~v   73 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADH-DLAA---LAVLNR-----MGVATKQVDAKDEAGLAKALGGFDAV   73 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEES-CHHH---HHHHHT-----TTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeC-CHHH---HHHHHh-----CCCcEEEecCCCHHHHHHHHcCCCEE
Confidence            4679999999 999999999999999 99999999 6543   333321     36788999999999999999999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      ||+++..                 ...++++++.+.+ +++|.+.+
T Consensus        74 i~~~~~~-----------------~~~~~~~~~~~~g-~~~~~~~~  101 (118)
T 3ic5_A           74 ISAAPFF-----------------LTPIIAKAAKAAG-AHYFDLTE  101 (118)
T ss_dssp             EECSCGG-----------------GHHHHHHHHHHTT-CEEECCCS
T ss_pred             EECCCch-----------------hhHHHHHHHHHhC-CCEEEecC
Confidence            9998521                 1357888899988 66554433

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.25  E-value=4.2e-11  Score=130.75  Aligned_cols=169  Identities=15%  Similarity=0.128  Sum_probs=120.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYI-VHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++.+|||||+|-||.++++.|+++|++ |++++| +..+.... ..+..+......+.++.+|++|.++++++++    
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R-~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSR-SGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECS-SCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeC-CCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            3578999999999999999999999987 777888 75542221 1122211123468889999999988877764    


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                        .+|+|||+|+......     .+.++..+++|+.|+.++.+++...- ...+||++||.....+...           
T Consensus      1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g----------- 2030 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAG----------- 2030 (2512)
T ss_dssp             HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTT-----------
T ss_pred             cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCC-----------
Confidence              5899999999754321     45567889999999999988776541 2479999999876554322           


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeC
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAG  202 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G  202 (341)
                                       ...|+.+|...+.+.+.....|++...+-.+.+-+
T Consensus      2031 -----------------~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2031 -----------------QANYGFANSAMERICEKRRHDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCT
T ss_pred             -----------------cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCC
Confidence                             46899999999999886665588888888776543

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.25  E-value=7.7e-12  Score=111.30  Aligned_cols=177  Identities=12%  Similarity=0.071  Sum_probs=112.8

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecCC----CCchh-hhhHhhhCCCCCCceEEEecCCC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY-------IVHTTLRPN----LEDKS-KVDLLKSLPGAETRLIFFEAEIY   68 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~----~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~   68 (341)
                      |. +++|||+||||+||||++++..|+..|.       +|.++++ +    ..+.. ....+.... .  .  + ..|+.
T Consensus         1 m~-~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di-~~~~~~~~~~g~~~dl~~~~-~--~--~-~~~i~   72 (329)
T 1b8p_A            1 MA-KTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEI-PNEKAQKALQGVMMEIDDCA-F--P--L-LAGMT   72 (329)
T ss_dssp             ---CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC-SCHHHHHHHHHHHHHHHTTT-C--T--T-EEEEE
T ss_pred             CC-CCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcC-CCccccccchhhHHHHhhhc-c--c--c-cCcEE
Confidence            53 3468999999999999999999999885       7888777 5    21111 111122210 0  1  1 13454


Q ss_pred             ChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCC
Q 019415           69 DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        69 ~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                      ...++.++++++|+|||+|+....... ...+++..|+..+.++++++.+.+ ...+||++|.....--          .
T Consensus        73 ~~~~~~~al~~aD~Vi~~ag~~~~~g~-~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t----------~  141 (329)
T 1b8p_A           73 AHADPMTAFKDADVALLVGARPRGPGM-ERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNA----------Y  141 (329)
T ss_dssp             EESSHHHHTTTCSEEEECCCCCCCTTC-CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH----------H
T ss_pred             EecCcHHHhCCCCEEEEeCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHH----------H
Confidence            455678889999999999997654322 234788999999999999999983 3459999987431110          0


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCC
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTN  205 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~  205 (341)
                      ...+..   .+      -.+...++.++....++...++ ..|++...++...|+|.+.
T Consensus       142 ~~~~~~---~~------~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg  191 (329)
T 1b8p_A          142 IAMKSA---PS------LPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS  191 (329)
T ss_dssp             HHHHTC---TT------SCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred             HHHHHc---CC------CCHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence            000000   00      0112457888777777777776 4477767777777888653

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.17  E-value=1.5e-10  Score=102.79  Aligned_cols=118  Identities=14%  Similarity=0.119  Sum_probs=84.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++|||+|+||+|++|.+++..|+++|  ++|.++++ +.. ......+.... ....+..    +.+..++.++++++|+
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di-~~~-~~~~~dL~~~~-~~~~v~~----~~~t~d~~~al~gaDv   79 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDV-VNA-PGVTADISHMD-TGAVVRG----FLGQQQLEAALTGMDL   79 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEES-SSH-HHHHHHHHTSC-SSCEEEE----EESHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeC-CCc-HhHHHHhhccc-ccceEEE----EeCCCCHHHHcCCCCE
Confidence            46899999999999999999999998  89999887 554 12222222211 1112222    2335678888999999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      |||+|+....... ....+...|+.++.++++++.+.+ .+.+|+++|-
T Consensus        80 Vi~~ag~~~~~g~-~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SN  126 (326)
T 1smk_A           80 IIVPAGVPRKPGM-TRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISN  126 (326)
T ss_dssp             EEECCCCCCCSSC-CCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCS
T ss_pred             EEEcCCcCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECC
Confidence            9999996554322 234778999999999999999998 6777777663

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.07  E-value=4.9e-09  Score=114.81  Aligned_cols=230  Identities=13%  Similarity=0.087  Sum_probs=142.0

Q ss_pred             CCCcEEEEecCcch-HHHHHHHHHHHCCCeEEEEecCCCCchh--hhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            4 KSNFKVCVTGGEGF-VGSWLIKKLLDKGYIVHTTLRPNLEDKS--KVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      .++|++|||||++- ||.++++.|++.|.+|++.+| +.....  ..+.+ ..+......+..+.+|+++++++.++++ 
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r-~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTS-RLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEES-CCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeC-ChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            35689999999999 999999999999999999999 765411  12222 2222233468889999999988877642 


Q ss_pred             ----------CCCEEEEeccC----Cccc------cchhH----hHhhhhhhhHHHHHHHHHHhc----C--CcCEEEEe
Q 019415           79 ----------GCDFVFHVATP----LQHI------DGYLY----KNVVEACVGAAKKIASFCVKS----G--TVKRLIYT  128 (341)
Q Consensus        79 ----------~~d~Vi~~a~~----~~~~------~~~~~----~~~~~~nv~~~~~l~~~~~~~----~--~~~~~I~~  128 (341)
                                +.|++||+||.    ....      ..+.+    +..+++|+.++..++.++...    +  ....+|..
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence                      47999999997    1110      11112    334888998888887766442    2  01122222


Q ss_pred             cccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c--C--CceEEEEecCceeCC
Q 019415          129 ASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S--S--GLEVVALALGVVAGD  203 (341)
Q Consensus       129 Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~--~--~~~~~vlRp~~v~G~  203 (341)
                      +|.. ....                            .....|+.||...+.+.+.++ +  .  ++++..+.||.+-+.
T Consensus      2293 ~ss~-~g~~----------------------------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT 2343 (3089)
T 3zen_D         2293 GSPN-RGMF----------------------------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGT 2343 (3089)
T ss_dssp             ECSS-TTSC----------------------------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECS
T ss_pred             CCcc-cccC----------------------------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCC
Confidence            2211 1100                            012479999999999999888 7  3  688999999998754


Q ss_pred             CCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC---CCc-e--EEEecc--c--
Q 019415          204 TNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSG-R--FFCTNV--F--  273 (341)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g-~--~n~~~~--~--  273 (341)
                      .....   ...........                  .......+|+|.+++.++....   ..+ .  ..++++  .  
T Consensus      2344 ~l~~~---~~~~~~~~~~~------------------~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~ 2402 (3089)
T 3zen_D         2344 GLMGQ---NDAIVSAVEEA------------------GVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIK 2402 (3089)
T ss_dssp             TTTTT---TTTTHHHHGGG------------------SCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCC
T ss_pred             ccccc---chhHHHHHHhc------------------CCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCC
Confidence            32111   00011111000                  1112268999999999886321   122 2  244443  2  


Q ss_pred             cCHHHHHHHHH
Q 019415          274 VSSAEIASCLQ  284 (341)
Q Consensus       274 ~s~~e~~~~i~  284 (341)
                      ..+.|+...+.
T Consensus      2403 ~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2403 IDMAELAAKAR 2413 (3089)
T ss_dssp             CCHHHHTHHHH
T ss_pred             CCHHHHHHHHH
Confidence            57888887654

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.94  E-value=3.5e-09  Score=93.45  Aligned_cols=116  Identities=15%  Similarity=0.102  Sum_probs=75.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhh----HhhhC-CCCCCceEEEecCCCChHHHHHHhcC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVD----LLKSL-PGAETRLIFFEAEIYDPDTFENAIQG   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~----~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (341)
                      |||+||||+||+|++++..|+..|.  ++.++++  +.+..+.+    .+... +.....+.+...+    +++.+++++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di--~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~g   74 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR--EHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDE   74 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC--GGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTT
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC--CCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCC
Confidence            6899999999999999999999885  5665544  11211111    11111 1111123333221    225567889


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +|+|||+|+....... ....++..|+.++.++++++++.+ -.+++++|.
T Consensus        75 aD~Vi~~Ag~~~~~g~-~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN  123 (313)
T 1hye_A           75 SDVVIITSGVPRKEGM-SRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN  123 (313)
T ss_dssp             CSEEEECCSCCCCTTC-CHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred             CCEEEECCCCCCCCCC-cHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence            9999999997654332 234789999999999999999997 344444443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.91  E-value=5.7e-09  Score=80.93  Aligned_cols=106  Identities=18%  Similarity=0.129  Sum_probs=73.4

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQG   79 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~   79 (341)
                      |...++++|+|+|+ |.+|+.+++.|.+.|++|++++| +...   .+.+..     .+..++.+|..+++.+.++ +.+
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~-~~~~---~~~~~~-----~~~~~~~~d~~~~~~l~~~~~~~   70 (144)
T 2hmt_A            1 MGRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDI-NEEK---VNAYAS-----YATHAVIANATEENELLSLGIRN   70 (144)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEES-CHHH---HHTTTT-----TCSEEEECCTTCHHHHHTTTGGG
T ss_pred             CCCCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHH-----hCCEEEEeCCCCHHHHHhcCCCC
Confidence            55445678999997 99999999999999999999988 6432   222221     1456788999998888776 778


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +|+||++++...           +.|    ..++..+++.+ .+++|..++..
T Consensus        71 ~d~vi~~~~~~~-----------~~~----~~~~~~~~~~~-~~~ii~~~~~~  107 (144)
T 2hmt_A           71 FEYVIVAIGANI-----------QAS----TLTTLLLKELD-IPNIWVKAQNY  107 (144)
T ss_dssp             CSEEEECCCSCH-----------HHH----HHHHHHHHHTT-CSEEEEECCSH
T ss_pred             CCEEEECCCCch-----------HHH----HHHHHHHHHcC-CCeEEEEeCCH
Confidence            999999976420           111    23566677777 67777666543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.90  E-value=8.4e-09  Score=90.51  Aligned_cols=114  Identities=14%  Similarity=-0.007  Sum_probs=77.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhh----HhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVD----LLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |||+|+||+|++|++++..|+..|.  ++..+++  +.+..+.+    .+.........+.+...   +    .++++++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di--~~~~~~~~~~~~dl~~~~~~~~~~~v~~~---~----~~a~~~a   71 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI--PDKEDDTVGQAADTNHGIAYDSNTRVRQG---G----YEDTAGS   71 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC--GGGHHHHHHHHHHHHHHHTTTCCCEEEEC---C----GGGGTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC--CCChhhHHHHHHHHHHHHhhCCCcEEEeC---C----HHHhCCC
Confidence            6899999999999999999999875  5665544  11112121    11111002224444432   2    3457899


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      |+|||+|+....... ....++..|+..+.++++++.+.+ .+.+|+++|-
T Consensus        72 DvVi~~ag~~~~~g~-~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SN  120 (303)
T 1o6z_A           72 DVVVITAGIPRQPGQ-TRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSN  120 (303)
T ss_dssp             SEEEECCCCCCCTTC-CHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCS
T ss_pred             CEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCC
Confidence            999999997654332 234778999999999999999997 6777777664

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.80  E-value=1.3e-08  Score=78.77  Aligned_cols=78  Identities=21%  Similarity=0.305  Sum_probs=59.8

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcC
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQG   79 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~   79 (341)
                      |...++++|+|+|+ |.+|+++++.|.+.|++|++++| +..   +.+.+..     .+..++.+|.++++.+.++ +++
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~-~~~---~~~~~~~-----~~~~~~~gd~~~~~~l~~~~~~~   70 (141)
T 3llv_A            1 MTENGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDK-SKE---KIELLED-----EGFDAVIADPTDESFYRSLDLEG   70 (141)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEES-CHH---HHHHHHH-----TTCEEEECCTTCHHHHHHSCCTT
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEEC-CHH---HHHHHHH-----CCCcEEECCCCCHHHHHhCCccc
Confidence            55455679999996 99999999999999999999998 653   3333333     2577899999999988876 467


Q ss_pred             CCEEEEecc
Q 019415           80 CDFVFHVAT   88 (341)
Q Consensus        80 ~d~Vi~~a~   88 (341)
                      +|+||.+.+
T Consensus        71 ~d~vi~~~~   79 (141)
T 3llv_A           71 VSAVLITGS   79 (141)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEecC
Confidence            999998765

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.77  E-value=3.4e-08  Score=91.34  Aligned_cols=105  Identities=19%  Similarity=0.247  Sum_probs=76.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +++|+|+| +|++|+++++.|++.|++|++++| +..   +.+.+..   ....+..+.+|+.+.+++.++++++|+|||
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R-~~~---~a~~la~---~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn   74 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACR-TLE---SAKKLSA---GVQHSTPISLDVNDDAALDAEVAKHDLVIS   74 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEES-SHH---HHHHTTT---TCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEEC-CHH---HHHHHHH---hcCCceEEEeecCCHHHHHHHHcCCcEEEE
Confidence            47899998 899999999999999999999999 653   2222222   123577889999999999999999999999


Q ss_pred             eccCCccccchhHhHhhh--hh-------hhHHHHHHHHHHhcC
Q 019415           86 VATPLQHIDGYLYKNVVE--AC-------VGAAKKIASFCVKSG  120 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~--~n-------v~~~~~l~~~~~~~~  120 (341)
                      +++......  .....++  .|       ...+.+++++|++.|
T Consensus        75 ~a~~~~~~~--i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG  116 (450)
T 1ff9_A           75 LIPYTFHAT--VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG  116 (450)
T ss_dssp             CCC--CHHH--HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred             CCccccchH--HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC
Confidence            998643221  0111122  12       236789999999998

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.76  E-value=1.1e-08  Score=89.34  Aligned_cols=81  Identities=25%  Similarity=0.247  Sum_probs=64.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +++++|||||+|.+|++++..|++.|++|+++.| +..+.... +.+...    .+++++.+|+++++++.++++.+|+|
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R-~~~~~~~l~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~Dvl  192 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR-KLDKAQAAADSVNKR----FKVNVTAAETADDASRAEAVKGAHFV  192 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHH----HTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEEC-CHHHHHHHHHHHHhc----CCcEEEEecCCCHHHHHHHHHhCCEE
Confidence            4579999999999999999999999999999999 75432221 111111    14567889999999999999999999


Q ss_pred             EEeccCC
Q 019415           84 FHVATPL   90 (341)
Q Consensus        84 i~~a~~~   90 (341)
                      ||+++..
T Consensus       193 Vn~ag~g  199 (287)
T 1lu9_A          193 FTAGAIG  199 (287)
T ss_dssp             EECCCTT
T ss_pred             EECCCcc
Confidence            9999854

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.72  E-value=5.8e-08  Score=87.64  Aligned_cols=93  Identities=17%  Similarity=0.189  Sum_probs=71.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|||+|+|| |++|+.+++.|.+ .++|++.+| +..+   ++.+.      +.+..+..|+.|.+.+.++++++|+||+
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~-~~~~---~~~~~------~~~~~~~~d~~d~~~l~~~~~~~DvVi~   83 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDV-NNEN---LEKVK------EFATPLKVDASNFDKLVEVMKEFELVIG   83 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEES-CHHH---HHHHT------TTSEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEc-CHHH---HHHHh------ccCCcEEEecCCHHHHHHHHhCCCEEEE
Confidence            479999998 9999999998876 489999888 6533   33322      2456788999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      ++++..                 ...++++|.+.|  ..+|=+|
T Consensus        84 ~~p~~~-----------------~~~v~~~~~~~g--~~yvD~s  108 (365)
T 3abi_A           84 ALPGFL-----------------GFKSIKAAIKSK--VDMVDVS  108 (365)
T ss_dssp             CCCGGG-----------------HHHHHHHHHHHT--CEEEECC
T ss_pred             ecCCcc-----------------cchHHHHHHhcC--cceEeee
Confidence            986532                 135788888888  5565444

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.71  E-value=9.8e-08  Score=73.46  Aligned_cols=98  Identities=18%  Similarity=0.174  Sum_probs=69.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi   84 (341)
                      .|+|+|+|+ |++|+.+++.|.+.|++|++++| +...   .+.+...    .++.++.+|..+++.+.+. ++++|+||
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~-~~~~---~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi   74 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI-DKDI---CKKASAE----IDALVINGDCTKIKTLEDAGIEDADMYI   74 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHH----CSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHH---HHHHHHh----cCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence            489999986 99999999999999999999988 6532   3333221    1456788999988877655 67899999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      ++....            +.|    ..+.+.++..+ .+++|..+
T Consensus        75 ~~~~~~------------~~~----~~~~~~~~~~~-~~~ii~~~  102 (140)
T 1lss_A           75 AVTGKE------------EVN----LMSSLLAKSYG-INKTIARI  102 (140)
T ss_dssp             ECCSCH------------HHH----HHHHHHHHHTT-CCCEEEEC
T ss_pred             EeeCCc------------hHH----HHHHHHHHHcC-CCEEEEEe
Confidence            996421            111    24555666676 56776543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.68  E-value=5.7e-08  Score=88.82  Aligned_cols=94  Identities=19%  Similarity=0.243  Sum_probs=70.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC---CeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhcC--
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG---YIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQG--   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--   79 (341)
                      |++|+|+|| |+||+.+++.|++.|   .+|++.+| +..+..... .+...  ....+..+.+|+++.+++.+++++  
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r-~~~~~~~la~~l~~~--~~~~~~~~~~D~~d~~~l~~~l~~~~   76 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASR-TLSKCQEIAQSIKAK--GYGEIDITTVDADSIEELVALINEVK   76 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEES-CHHHHHHHHHHHHHT--TCCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEEC-CHHHHHHHHHHhhhh--cCCceEEEEecCCCHHHHHHHHHhhC
Confidence            368999998 999999999999998   38999999 765433221 11111  013588999999999999999987  


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG  120 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~  120 (341)
                      +|+|||++++..                 ...++++|.+.+
T Consensus        77 ~DvVin~ag~~~-----------------~~~v~~a~l~~g  100 (405)
T 4ina_A           77 PQIVLNIALPYQ-----------------DLTIMEACLRTG  100 (405)
T ss_dssp             CSEEEECSCGGG-----------------HHHHHHHHHHHT
T ss_pred             CCEEEECCCccc-----------------ChHHHHHHHHhC
Confidence            999999987422                 135677788877

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.68  E-value=1.3e-07  Score=83.21  Aligned_cols=117  Identities=14%  Similarity=0.135  Sum_probs=81.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      |||.|+||+|++|..++..|+..|  .+|.++++ +. .......+.... ....++...    ...+++++++++|+||
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di-~~-~~~~a~dL~~~~-~~~~l~~~~----~t~d~~~a~~~aDvVv   73 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI-AH-TPGVAADLSHIE-TRATVKGYL----GPEQLPDCLKGCDVVV   73 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES-SS-HHHHHHHHTTSS-SSCEEEEEE----SGGGHHHHHTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeC-Cc-cHHHHHHHhccC-cCceEEEec----CCCCHHHHhCCCCEEE
Confidence            689999999999999999999988  78999998 65 222222222211 111122221    1245777899999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ++|+.......+ ..+.+..|+..+..+++.+.+...-.++|++|-.
T Consensus        74 i~ag~~~~~g~~-r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNP  119 (314)
T 1mld_A           74 IPAGVPRKPGMT-RDDLFNTNATIVATLTAACAQHCPDAMICIISNP  119 (314)
T ss_dssp             ECCSCCCCTTCC-GGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred             ECCCcCCCCCCc-HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCC
Confidence            999976543322 2367899999999999999888634578877654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.62  E-value=4.5e-08  Score=86.66  Aligned_cols=118  Identities=17%  Similarity=0.071  Sum_probs=79.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--e-----EEEEecCCCCc-h--hhhhHhhhCCCCCCceEEEecCCCChHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--I-----VHTTLRPNLED-K--SKVDLLKSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~~-~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      +.+||+||||+|+||++++..|+..|.  +     +.++++ +... .  .....+.... . +...    ++.......
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di-~~~~~~~~g~a~DL~~~~-~-~~~~----~~~~~~~~~   74 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDI-TPMMGVLDGVLMELQDCA-L-PLLK----DVIATDKEE   74 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECC-GGGHHHHHHHHHHHHHTC-C-TTEE----EEEEESCHH
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeC-CCccccchhhHhhhHhhh-h-cccC----CEEEcCCcH
Confidence            468999999999999999999998764  4     777777 4321 1  1111222210 0 1111    121223456


Q ss_pred             HHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcC--EEEEeccc
Q 019415           75 NAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK--RLIYTASV  131 (341)
Q Consensus        75 ~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~--~~I~~Ss~  131 (341)
                      +.++++|+||++||...... ....++++.|+..++++++++.+.+ .+  ++|.+|-.
T Consensus        75 ~~~~daDvVvitAg~prkpG-~tR~dll~~N~~i~~~i~~~i~~~~-~~~~~vivvsNP  131 (333)
T 5mdh_A           75 IAFKDLDVAILVGSMPRRDG-MERKDLLKANVKIFKCQGAALDKYA-KKSVKVIVVGNP  131 (333)
T ss_dssp             HHTTTCSEEEECCSCCCCTT-CCTTTTHHHHHHHHHHHHHHHHHHS-CTTCEEEECSSS
T ss_pred             HHhCCCCEEEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCCc
Confidence            77889999999998654322 2345789999999999999999998 43  67777764

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.55  E-value=3.3e-07  Score=76.21  Aligned_cols=77  Identities=22%  Similarity=0.313  Sum_probs=55.6

Q ss_pred             CCcEEEEecC----------------cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC
Q 019415            5 SNFKVCVTGG----------------EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   68 (341)
                      ++|+||||||                +|.+|.++++.|+++|++|+.+.| .....         +....++..+..  .
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~-~~~~~---------~~~~~~~~~~~v--~   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITT-KRALK---------PEPHPNLSIREI--T   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEC-TTSCC---------CCCCTTEEEEEC--C
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeC-Ccccc---------ccCCCCeEEEEH--h
Confidence            4689999999                999999999999999999999999 43210         001235555544  3


Q ss_pred             Ch----HHHHHHhcCCCEEEEeccCCccc
Q 019415           69 DP----DTFENAIQGCDFVFHVATPLQHI   93 (341)
Q Consensus        69 ~~----~~~~~~~~~~d~Vi~~a~~~~~~   93 (341)
                      ..    +.+.+.+.++|++||+||.....
T Consensus        70 s~~em~~~v~~~~~~~Dili~aAAvsD~~   98 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQVLIHSMAVSDYT   98 (232)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence            43    34444556899999999976543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.53  E-value=1.4e-06  Score=68.38  Aligned_cols=75  Identities=19%  Similarity=0.201  Sum_probs=58.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~V   83 (341)
                      .+++|+|+|+ |.+|..+++.|.+.|++|++++| +...   .+.+..    ..+..++.+|..+++.+.++ ++++|+|
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~-~~~~---~~~~~~----~~g~~~~~~d~~~~~~l~~~~~~~ad~V   88 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDK-NEYA---FHRLNS----EFSGFTVVGDAAEFETLKECGMEKADMV   88 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CGGG---GGGSCT----TCCSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHH---HHHHHh----cCCCcEEEecCCCHHHHHHcCcccCCEE
Confidence            4579999995 99999999999999999999999 7643   222220    12566788999888777765 6789999


Q ss_pred             EEecc
Q 019415           84 FHVAT   88 (341)
Q Consensus        84 i~~a~   88 (341)
                      |.+.+
T Consensus        89 i~~~~   93 (155)
T 2g1u_A           89 FAFTN   93 (155)
T ss_dssp             EECSS
T ss_pred             EEEeC
Confidence            99865

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.52  E-value=4.5e-07  Score=71.13  Aligned_cols=77  Identities=16%  Similarity=0.185  Sum_probs=59.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi   84 (341)
                      .++|+|+|+ |.+|+++++.|.+.|++|++++| +..  .+.+.+...  ...++.++.+|.++++.+.++ ++++|.||
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~-~~~--~~~~~~~~~--~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISN-LPE--DDIKQLEQR--LGDNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEEC-CCH--HHHHHHHHH--HCTTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEEC-CCh--HHHHHHHHh--hcCCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence            368999995 99999999999999999999988 642  222222211  013688999999999999887 88999999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      -+.+
T Consensus        77 ~~~~   80 (153)
T 1id1_A           77 ALSD   80 (153)
T ss_dssp             ECSS
T ss_pred             EecC
Confidence            8854

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.44  E-value=3.9e-07  Score=84.45  Aligned_cols=107  Identities=20%  Similarity=0.238  Sum_probs=74.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++++|+|+|| |++|+.++..|++. |++|++++| +.++   .+.+...    .++..+.+|+.+.+++.++++++|+|
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R-~~~k---a~~la~~----~~~~~~~~D~~d~~~l~~~l~~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACR-TLAN---AQALAKP----SGSKAISLDVTDDSALDKVLADNDVV   92 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEES-SHHH---HHHHHGG----GTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEEC-CHHH---HHHHHHh----cCCcEEEEecCCHHHHHHHHcCCCEE
Confidence            4578999997 99999999999998 789999999 6543   3333221    14667889999999999999999999


Q ss_pred             EEeccCCcccc-c-hhH---hHhhhhhh--hHHHHHHHHHHhcC
Q 019415           84 FHVATPLQHID-G-YLY---KNVVEACV--GAAKKIASFCVKSG  120 (341)
Q Consensus        84 i~~a~~~~~~~-~-~~~---~~~~~~nv--~~~~~l~~~~~~~~  120 (341)
                      ||+++...... . ...   ...++.+.  .....++++|++.|
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aG  136 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAG  136 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcC
Confidence            99988643211 0 000   01112222  34577888888887

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.44  E-value=4e-06  Score=74.66  Aligned_cols=85  Identities=8%  Similarity=-0.022  Sum_probs=62.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHH-HCCCeEEEEecCCCCchhh-h--------hHh-hhCCCCCCceEEEecCCCChHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLL-DKGYIVHTTLRPNLEDKSK-V--------DLL-KSLPGAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~-~--------~~~-~~~~~~~~~~~~~~~Dl~~~~~~   73 (341)
                      .+|++|||||+.-+|.+.+..|+ ..|..|+++.| ......+ .        ..+ +...........+.+|+.+++.+
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~-~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSF-EKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEEC-CCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEec-CCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            46899999999999999999998 67899998887 5433221 0        011 11112234788999999999888


Q ss_pred             HHHhc-------CCCEEEEeccCC
Q 019415           74 ENAIQ-------GCDFVFHVATPL   90 (341)
Q Consensus        74 ~~~~~-------~~d~Vi~~a~~~   90 (341)
                      +++++       ++|++||.+|..
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccc
Confidence            87765       589999999965

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.32  E-value=2.8e-06  Score=65.43  Aligned_cols=74  Identities=18%  Similarity=0.167  Sum_probs=59.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~V   83 (341)
                      .+++|+|+| .|.+|+.+++.|.+.|++|+++++ +..   +.+.+..     .++.++.+|.++++.+.++ ++++|.|
T Consensus         6 ~~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~-~~~---~~~~~~~-----~g~~~i~gd~~~~~~l~~a~i~~ad~v   75 (140)
T 3fwz_A            6 ICNHALLVG-YGRVGSLLGEKLLASDIPLVVIET-SRT---RVDELRE-----RGVRAVLGNAANEEIMQLAHLECAKWL   75 (140)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEES-CHH---HHHHHHH-----TTCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEEC-CHH---HHHHHHH-----cCCCEEECCCCCHHHHHhcCcccCCEE
Confidence            356899999 599999999999999999999999 664   3444443     2678899999999988775 5789999


Q ss_pred             EEecc
Q 019415           84 FHVAT   88 (341)
Q Consensus        84 i~~a~   88 (341)
                      |-+.+
T Consensus        76 i~~~~   80 (140)
T 3fwz_A           76 ILTIP   80 (140)
T ss_dssp             EECCS
T ss_pred             EEECC
Confidence            88754

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.32  E-value=3.1e-06  Score=70.18  Aligned_cols=73  Identities=12%  Similarity=0.146  Sum_probs=54.2

Q ss_pred             CCcEEEEecC----------------cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC
Q 019415            5 SNFKVCVTGG----------------EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY   68 (341)
Q Consensus         5 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   68 (341)
                      ++++||||||                +|.+|.++++.|+++|++|+++.| +..-       . .   ..++.  ..|++
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~-~~~l-------~-~---~~g~~--~~dv~   72 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG-PVSL-------P-T---PPFVK--RVDVM   72 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC-SCCC-------C-C---CTTEE--EEECC
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEEC-Cccc-------c-c---CCCCe--EEccC
Confidence            4689999999                699999999999999999999888 4321       0 0   12333  45777


Q ss_pred             ChHHHHH----HhcCCCEEEEeccCCc
Q 019415           69 DPDTFEN----AIQGCDFVFHVATPLQ   91 (341)
Q Consensus        69 ~~~~~~~----~~~~~d~Vi~~a~~~~   91 (341)
                      +.+++.+    .+.++|++||+||...
T Consensus        73 ~~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           73 TALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cHHHHHHHHHHhcCCCCEEEECCcccC
Confidence            7654443    3457999999999754

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.28  E-value=7.3e-06  Score=72.20  Aligned_cols=120  Identities=23%  Similarity=0.124  Sum_probs=80.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhh-hhHhhhC-CCCCCceEEEecCCCChHHHHHH
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSK-VDLLKSL-PGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      |+ ++.|||.|+|+ |.+|..++..|+..|.  +|.++++ +...... ...+... +-....+.....|       .+.
T Consensus         1 m~-~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~-~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a   70 (326)
T 3pqe_A            1 MN-KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YED   70 (326)
T ss_dssp             -C-CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGG
T ss_pred             CC-CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEec-chHHHHHHHHHHHhccccccCCeEEEeCc-------HHH
Confidence            53 35689999995 9999999999999986  8999888 6533221 1112221 1111244444333       236


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ++++|+||.+||...... ....+++..|+.....+++.+.+...-..++.+|-.
T Consensus        71 ~~~aDvVvi~ag~p~kpG-~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNP  124 (326)
T 3pqe_A           71 CKDADIVCICAGANQKPG-ETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNP  124 (326)
T ss_dssp             GTTCSEEEECCSCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             hCCCCEEEEecccCCCCC-ccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCCh
Confidence            789999999998654332 224478899999999999999988634466666643

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.27  E-value=2.5e-06  Score=71.00  Aligned_cols=73  Identities=16%  Similarity=0.259  Sum_probs=58.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi~   85 (341)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++++ +...   .+.+...    .+..++.+|.++++.+.++ ++++|+||-
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~-~~~~---~~~l~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~   71 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINK-DREL---CEEFAKK----LKATIIHGDGSHKEILRDAEVSKNDVVVI   71 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEES-CHHH---HHHHHHH----SSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEC-CHHH---HHHHHHH----cCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence            68999995 99999999999999999999998 6543   3333221    1577899999999998887 788999997


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +.+
T Consensus        72 ~~~   74 (218)
T 3l4b_C           72 LTP   74 (218)
T ss_dssp             CCS
T ss_pred             ecC
Confidence            643

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.26  E-value=6e-06  Score=66.62  Aligned_cols=73  Identities=19%  Similarity=0.195  Sum_probs=59.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH--hcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA--IQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~--~~~~d~   82 (341)
                      +++|+|+| .|.+|..+++.|.+. |++|++++| +...   .+.+...     ++.++.+|.++++.+.++  ++++|+
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~-~~~~---~~~~~~~-----g~~~~~gd~~~~~~l~~~~~~~~ad~  108 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEI-REEA---AQQHRSE-----GRNVISGDATDPDFWERILDTGHVKL  108 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEES-CHHH---HHHHHHT-----TCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEEC-CHHH---HHHHHHC-----CCCEEEcCCCCHHHHHhccCCCCCCE
Confidence            46899998 699999999999999 999999999 6533   3333331     567888999998888877  788999


Q ss_pred             EEEecc
Q 019415           83 VFHVAT   88 (341)
Q Consensus        83 Vi~~a~   88 (341)
                      ||.+.+
T Consensus       109 vi~~~~  114 (183)
T 3c85_A          109 VLLAMP  114 (183)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            998754

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.24  E-value=2.2e-06  Score=76.03  Aligned_cols=117  Identities=9%  Similarity=0.072  Sum_probs=75.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      +++||.|+|++|+||+.++..|+..|  .+|.++++ +..... ....+....-....+.+       ..++.+.++++|
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi-~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al~dAD   78 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP-FAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEALTDAK   78 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS-CHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHHTTEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC-CchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHhCCCC
Confidence            46799999999999999999999998  58998877 543211 11112221100012221       234667788999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcC-EEEEecc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK-RLIYTAS  130 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~I~~Ss  130 (341)
                      +||.+||..... .....+.+..|+...+.+++.+.+...-. .+|.+|-
T Consensus        79 vVvitaG~p~kp-G~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           79 YIVSSGGAPRKE-GMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             EEEECCC--------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             EEEEccCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            999999975433 22345788999999999999999887233 3556554

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.06  E-value=2.1e-05  Score=69.21  Aligned_cols=116  Identities=20%  Similarity=0.137  Sum_probs=68.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|||.|+|+ |.+|+.++..|+..|.  +|.++++ +..... ....+.........+.+...|       .+.++++|
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~-~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD   78 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI-FKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD   78 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC-ChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence            4689999996 9999999999999886  8898877 543211 111122211111234444332       23578999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +||.+||..... .....++++.|+.-.+.+.+.+.+...-..++.+|-
T Consensus        79 iVvi~ag~~~kp-G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           79 LVVITAGAPQKP-GETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             EEEECCCCC-----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred             EEEECCCCCCCC-CchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence            999999975432 223457789999999999999998863456666654

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.03  E-value=5.2e-05  Score=66.75  Aligned_cols=115  Identities=15%  Similarity=0.087  Sum_probs=72.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|||.|+|+ |++|..++..|+..|.  +|.++++ +..+.. ....+.........+.+..   .+    .+.++++|
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di-~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~aD   76 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDV-FKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDCD   76 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECC-C---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCCC
Confidence            4589999997 9999999999999986  8999988 654322 1222222111222343332   12    33588999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      +||.+++...... ....+....|+.....+++.+.+...-..+|.+|
T Consensus        77 vVii~~g~p~k~g-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           77 VIVVTAGANRKPG-ETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             EEEECCCC-------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEEEcCCCCCCCC-cCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            9999998654322 1234678899999999999998875334555543

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.94  E-value=5.8e-05  Score=65.47  Aligned_cols=116  Identities=15%  Similarity=0.088  Sum_probs=77.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchh-hhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKS-KVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+|+ |.+|..++..|+..|+  +|.++++ +..... ....+.. .+.......+...+  |    .+.++++|+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~-~~~~~~g~~~dl~~~~~~~~~~~~i~~t~--d----~~a~~~aDi   72 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI-AEDLAVGEAMDLAHAAAGIDKYPKIVGGA--D----YSLLKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS-SHHHHHHHHHHHHHHHHTTTCCCEEEEES--C----GGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEC-ChHHHHHHHHHHHhhhhhcCCCCEEEEeC--C----HHHhCCCCE
Confidence            68999998 9999999999999987  8999988 654322 0111111 11111122222211  2    347789999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ||.+|+...... ....+++..|+...+.+.+.+.+.+.-..+|.+|-.
T Consensus        73 VViaag~~~kpG-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNP  120 (294)
T 1oju_A           73 IVVTAGLARKPG-MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             EEECCCCCCCSS-CCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             EEECCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence            999998754332 224477899999999999999998644566666643

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.94  E-value=7.3e-05  Score=65.76  Aligned_cols=120  Identities=19%  Similarity=0.105  Sum_probs=76.7

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhh-hhHhhh-CCCCCCceEEEecCCCChHHHHHH
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSK-VDLLKS-LPGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      |+..++|||.|+|| |.+|..++..|+..|  .+|.++++ +..+... ...+.. .+.....+.+.. |  +    .+.
T Consensus         1 m~~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a   71 (317)
T 3d0o_A            1 MNKFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDL-DTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSD   71 (317)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECS-CHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGG
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHH
Confidence            66555689999998 999999999999888  48888877 6432211 111111 111112333333 2  2    345


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ++++|+||.+++...... .........|+.....+.+.+.+...-..+|.+|-
T Consensus        72 ~~~aDvVvi~ag~~~~~g-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN  124 (317)
T 3d0o_A           72 CHDADLVVICAGAAQKPG-ETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATN  124 (317)
T ss_dssp             GTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             hCCCCEEEECCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence            789999999998754332 22346788899999999999988863455665443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.94  E-value=8.4e-05  Score=65.00  Aligned_cols=116  Identities=16%  Similarity=0.084  Sum_probs=77.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC-C--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK-G--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      |||.|+||+|.||..++..|... +  .++.++++ +.........+...+   ....+... ..  ....+.++++|+|
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di-~~~~~G~a~Dl~~~~---~~~~v~~~-~~--~~~~~~~~~aDiv   73 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI-APVTPGVAVDLSHIP---TAVKIKGF-SG--EDATPALEGADVV   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECS-STTHHHHHHHHHTSC---SSEEEEEE-CS--SCCHHHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEec-CCCchhHHHHhhCCC---CCceEEEe-cC--CCcHHHhCCCCEE
Confidence            68999999999999999999875 5  57888887 542111222222221   12222211 00  1134577899999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |-+||...... ....++++.|+.....+.+.+.+...-..++.+|-
T Consensus        74 ii~ag~~rkpG-~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           74 LISAGVARKPG-MDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             EECCSCSCCTT-CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99999754332 23458899999999999999988863446666654

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.94  E-value=8.9e-05  Score=65.63  Aligned_cols=116  Identities=14%  Similarity=-0.000  Sum_probs=74.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhh-hhHhhh-CC--CCCCceEEEecCCCChHHHHHHhcC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSK-VDLLKS-LP--GAETRLIFFEAEIYDPDTFENAIQG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~-~~--~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (341)
                      ++|||.|+|| |.+|..++..|+..|+ +|.++++ +...... ...+.. ..  .....+...       .++++.+++
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~-~~~~~~~~~~~l~~~~~~~~~~~~i~~t-------~d~~ea~~~   78 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDV-VKGMPEGKALDLSHVTSVVDTNVSVRAE-------YSYEAALTG   78 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SSSHHHHHHHHHHHHHHHTTCCCCEEEE-------CSHHHHHTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEEC-ChhHHHHHHHHHHhhhhccCCCCEEEEe-------CCHHHHhCC
Confidence            3579999997 9999999999999998 9999888 7654332 111111 00  111122211       235557889


Q ss_pred             CCEEEEeccCCccccc-h---hHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           80 CDFVFHVATPLQHIDG-Y---LYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~-~---~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      +|+||-+++....... .   ........|+.....+++.+.+...-..+|.+|
T Consensus        79 aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           79 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            9999999975443211 0   123567788888899999988875223444443

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.94  E-value=0.00011  Score=64.73  Aligned_cols=120  Identities=18%  Similarity=0.216  Sum_probs=77.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhh--hhHhhhCCCCCCceEEEecCCCChHHHHHH
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSK--VDLLKSLPGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      |..++++||.|+|+ |.+|..++..|+..|.  +|.++++ +......  .+.....+.....+.+.. |  +    .+.
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di-~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~a   71 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDA-NESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDD   71 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGG
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeC-CcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHH
Confidence            77767789999998 9999999999988773  8999988 6532221  111112221112344442 2  2    235


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ++++|+||-+++....... ...+.+..|..-...+++.+.+...-..+|.+|-
T Consensus        72 l~~aDvViia~~~~~~~g~-~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN  124 (316)
T 1ldn_A           72 CRDADLVVICAGANQKPGE-TRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN  124 (316)
T ss_dssp             TTTCSEEEECCSCCCCTTT-CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             hCCCCEEEEcCCCCCCCCC-CHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence            7899999999987554332 2235677888888899988888762334554443

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.93  E-value=1.2e-05  Score=67.68  Aligned_cols=71  Identities=13%  Similarity=0.071  Sum_probs=57.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi   84 (341)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |++++| ++..   .+.+.      .++.++.+|.++++.+.++ ++++|.||
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~-~~~~---~~~~~------~~~~~i~gd~~~~~~l~~a~i~~ad~vi   76 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAED-ENVR---KKVLR------SGANFVHGDPTRVSDLEKANVRGARAVI   76 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESC-GGGH---HHHHH------TTCEEEESCTTCHHHHHHTTCTTCSEEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEEC-CHHH---HHHHh------cCCeEEEcCCCCHHHHHhcCcchhcEEE
Confidence            478999996 9999999999999999 999888 6543   23232      2678999999999999877 78999999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      -+.+
T Consensus        77 ~~~~   80 (234)
T 2aef_A           77 VDLE   80 (234)
T ss_dssp             ECCS
T ss_pred             EcCC
Confidence            8753

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.92  E-value=4.6e-06  Score=68.99  Aligned_cols=71  Identities=23%  Similarity=0.285  Sum_probs=49.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhH-hhh-CCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDL-LKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      |||+|+||+|++|+++++.|++.|++|++++| +......... ... .+         ..|+. ..++.++++++|+||
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~D~Vi   69 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSR-REEKAEAKAAEYRRIAG---------DASIT-GMKNEDAAEACDIAV   69 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-SHHHHHHHHHHHHHHHS---------SCCEE-EEEHHHHHHHCSEEE
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHhccccc---------cCCCC-hhhHHHHHhcCCEEE
Confidence            58999999999999999999999999999999 7543222211 110 00         01221 234566777899999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      ++..
T Consensus        70 ~~~~   73 (212)
T 1jay_A           70 LTIP   73 (212)
T ss_dssp             ECSC
T ss_pred             EeCC
Confidence            9965

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.86  E-value=4.5e-05  Score=67.86  Aligned_cols=97  Identities=16%  Similarity=0.184  Sum_probs=60.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-----C-eEEEEecCCCCchhhhhHhhhCCCCC--CceEEEecCCCChHHHHHHh
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-----Y-IVHTTLRPNLEDKSKVDLLKSLPGAE--TRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      +|||+|+||||++|+.|++.|.+++     + +|+.+.+ +.+........  .+...  ..+.+.  |+ +++    .+
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s-~~~agk~~~~~--~~~l~~~~~~~~~--~~-~~~----~~   78 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTA-ATSAGSTLGEH--HPHLTPLAHRVVE--PT-EAA----VL   78 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEE-SSCTTSBGGGT--CTTCGGGTTCBCE--EC-CHH----HH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEEC-CCcCCCchhhh--cccccccceeeec--cC-CHH----Hh
Confidence            4799999999999999999999987     4 7777754 32221111110  01110  112221  22 222    35


Q ss_pred             cCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           78 QGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        78 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      .++|+||.+.+...                 +..++..+ +.|  .++|-+|+..
T Consensus        79 ~~~DvVf~alg~~~-----------------s~~~~~~~-~~G--~~vIDlSa~~  113 (352)
T 2nqt_A           79 GGHDAVFLALPHGH-----------------SAVLAQQL-SPE--TLIIDCGADF  113 (352)
T ss_dssp             TTCSEEEECCTTSC-----------------CHHHHHHS-CTT--SEEEECSSTT
T ss_pred             cCCCEEEECCCCcc-----------------hHHHHHHH-hCC--CEEEEECCCc
Confidence            58999999977543                 23466667 677  5799999886

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.81  E-value=2.3e-05  Score=64.04  Aligned_cols=98  Identities=15%  Similarity=0.101  Sum_probs=63.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHH---HHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDT---FENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~   79 (341)
                      .+++|||+||+|-||..+++.+...|.+|++++| +...   .+.+..+     +... ..|..+.+.   +.+...  +
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~-~~~~---~~~~~~~-----g~~~-~~d~~~~~~~~~~~~~~~~~~  107 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG-SDAK---REMLSRL-----GVEY-VGDSRSVDFADEILELTDGYG  107 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES-SHHH---HHHHHTT-----CCSE-EEETTCSTHHHHHHHHTTTCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHc-----CCCE-EeeCCcHHHHHHHHHHhCCCC
Confidence            4679999999999999999999999999999988 6432   3333332     1111 236655433   333332  5


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +|+||++++.   .       .       ....++.++..   .++|.+++..
T Consensus       108 ~D~vi~~~g~---~-------~-------~~~~~~~l~~~---G~~v~~g~~~  140 (198)
T 1pqw_A          108 VDVVLNSLAG---E-------A-------IQRGVQILAPG---GRFIELGKKD  140 (198)
T ss_dssp             EEEEEECCCT---H-------H-------HHHHHHTEEEE---EEEEECSCGG
T ss_pred             CeEEEECCch---H-------H-------HHHHHHHhccC---CEEEEEcCCC
Confidence            8999999862   1       0       22344444443   4899888754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.80  E-value=5.2e-05  Score=66.37  Aligned_cols=83  Identities=11%  Similarity=0.000  Sum_probs=59.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +++++||+|+ |-+|+.++..|++.|. +|+++.| +.+...+.+.+.. +... .+..+...++.+.+.+.+.+.++|+
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR-~~~~~~~a~~la~~~~~~-~~~~~~~~~~~~~~~l~~~l~~aDi  229 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNR-KDDFYANAEKTVEKINSK-TDCKAQLFDIEDHEQLRKEIAESVI  229 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEEC-SSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEEC-CCchHHHHHHHHHHhhhh-cCCceEEeccchHHHHHhhhcCCCE
Confidence            4689999996 8899999999999997 8999999 7432233333321 1100 1234445567777778888899999


Q ss_pred             EEEeccCC
Q 019415           83 VFHVATPL   90 (341)
Q Consensus        83 Vi~~a~~~   90 (341)
                      ||++....
T Consensus       230 IINaTp~G  237 (315)
T 3tnl_A          230 FTNATGVG  237 (315)
T ss_dssp             EEECSSTT
T ss_pred             EEECccCC
Confidence            99997643

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.77  E-value=0.00014  Score=63.81  Aligned_cols=116  Identities=20%  Similarity=0.126  Sum_probs=75.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCC-Cchhhh---hHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNL-EDKSKV---DLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~-~~~~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      .+||.|+|+ |.+|..++..|+..|+ +|+++++ +. ....+.   +.....+.......+...+  +    .+.++++
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~-~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~~~a   79 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKELADVVLVDI-PQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADTADS   79 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECC-GGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEec-cchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHhCCC
Confidence            469999996 9999999999999999 9999988 63 211111   1111100000111122111  2    2467899


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |+||-+|+...... ....+++..|+...+.+.+.+.+...-..++.+|-
T Consensus        80 DvVIiaag~p~kpg-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           80 DVVVITAGIARKPG-MSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             SEEEECCSCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CEEEEeCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            99999998755432 22457889999999999999988863446666664

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.77  E-value=0.00025  Score=62.12  Aligned_cols=113  Identities=12%  Similarity=0.042  Sum_probs=69.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhh-hhHhhhC-CCCCCceEEEe-cCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSK-VDLLKSL-PGAETRLIFFE-AEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~-~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+|| |.+|..++..|+..|+ +|.++++ +...... ...+... ........+.. .|      + +.++++|+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~~aD~   73 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDI-VEGVPQGKALDLYEASPIEGFDVRVTGTNN------Y-ADTANSDV   73 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCCEEEESC------G-GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeC-CccHHHHHHHhHHHhHhhcCCCeEEEECCC------H-HHHCCCCE
Confidence            79999998 9999999999999996 8888877 6543221 1111110 00001122222 22      2 45789999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ||.+++....... ........|+.....+++.+.+.. .+.+|.+.|
T Consensus        74 Vi~a~g~p~~~g~-~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t  119 (309)
T 1ur5_A           74 IVVTSGAPRKPGM-SREDLIKVNADITRACISQAAPLS-PNAVIIMVN  119 (309)
T ss_dssp             EEECCCC---------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECC
T ss_pred             EEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcC
Confidence            9999986543321 123567888899999999998886 454444333

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.77  E-value=0.00024  Score=62.46  Aligned_cols=115  Identities=15%  Similarity=0.085  Sum_probs=75.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchh-hhhHhhhC---CCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKS-KVDLLKSL---PGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-~~~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      +|||.|+|| |.+|..++..|+..|+ +|.++++ +..... ....+...   ......+.. ..|      . +.++++
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d------~-~a~~~a   76 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDI-AEGTPQGKGLDIAESSPVDGFDAKFTG-AND------Y-AAIEGA   76 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-SSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS------G-GGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeC-CchhHHHHHHHHhchhhhcCCCCEEEE-eCC------H-HHHCCC
Confidence            579999997 9999999999999998 9999988 765422 11111110   011112221 122      2 477899


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      |+||.+|+...... ....+++..|+.....+++.+.+...-..+|.+|-.
T Consensus        77 DiVIiaag~p~k~G-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP  126 (324)
T 3gvi_A           77 DVVIVTAGVPRKPG-MSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP  126 (324)
T ss_dssp             SEEEECCSCCCC------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred             CEEEEccCcCCCCC-CCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence            99999998654332 223467888999999999999888633466666643

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.77  E-value=0.00017  Score=65.76  Aligned_cols=73  Identities=16%  Similarity=0.251  Sum_probs=60.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi   84 (341)
                      .++|+|+| .|.+|+.+++.|.+.|++|+++++ ++.   ..+.+..     .++.++.+|.++++.+.++ ++++|+||
T Consensus         4 ~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~-d~~---~v~~~~~-----~g~~vi~GDat~~~~L~~agi~~A~~vi   73 (413)
T 3l9w_A            4 GMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDH-DPD---HIETLRK-----FGMKVFYGDATRMDLLESAGAAKAEVLI   73 (413)
T ss_dssp             CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEEC-CHH---HHHHHHH-----TTCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEEC-CHH---HHHHHHh-----CCCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence            47899999 599999999999999999999998 664   3444443     2677899999999999887 78899998


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      -+..
T Consensus        74 v~~~   77 (413)
T 3l9w_A           74 NAID   77 (413)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            8754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.75  E-value=6.1e-05  Score=67.82  Aligned_cols=76  Identities=21%  Similarity=0.220  Sum_probs=56.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+|+ |-||..+++.|...|.+|++++| +..+   .+.+...-+  ..   +.+|..+.+++.+.++++|+||
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~-~~~~---~~~~~~~~g--~~---~~~~~~~~~~l~~~~~~~DvVi  234 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDV-NHKR---LQYLDDVFG--GR---VITLTATEANIKKSVQHADLLI  234 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHHTT--TS---EEEEECCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC-CHHH---HHHHHHhcC--ce---EEEecCCHHHHHHHHhCCCEEE
Confidence            3579999998 99999999999999999999998 6543   222222111  11   3456677788888999999999


Q ss_pred             EeccCC
Q 019415           85 HVATPL   90 (341)
Q Consensus        85 ~~a~~~   90 (341)
                      ++++..
T Consensus       235 ~~~g~~  240 (369)
T 2eez_A          235 GAVLVP  240 (369)
T ss_dssp             ECCC--
T ss_pred             ECCCCC
Confidence            998864

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.74  E-value=0.00018  Score=63.25  Aligned_cols=116  Identities=16%  Similarity=0.101  Sum_probs=73.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|||.|+|| |.+|..++..|+..+.  +|.++++ +..+... ...+.........+.+.. |  +    .+.++++|
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD   74 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDV-VKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDAD   74 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC-CchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCC
Confidence            3489999998 9999999999999875  8888887 6533221 112222111112444443 2  2    34578999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +||..++...... ....+.+..|+.....+.+.+.+...-.++|.+|-
T Consensus        75 vVii~ag~~~~~g-~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  122 (318)
T 1ez4_A           75 LVVITAGAPQKPG-ESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN  122 (318)
T ss_dssp             EEEECCCC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             EEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            9999998754332 22346778899999999999988863456666544

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.72  E-value=0.00026  Score=62.36  Aligned_cols=116  Identities=17%  Similarity=0.102  Sum_probs=75.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|||.|+|| |.+|..++..|+..+.  +|.++++ +..+... ...+.........+.+.. |  +    .+.++++|
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~aD   78 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDI-FKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDAD   78 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-CHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeC-CchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCCC
Confidence            3579999998 9999999999988875  7888887 6533211 111222111112444443 2  2    34578999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +||..++...... ......+..|+.....+.+.+.+...-.++|.+|-
T Consensus        79 vVii~ag~~~k~g-~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           79 LVVITAGAPQKPG-ETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             EEEECCCCC------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             EEEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            9999998754332 22346788899999999999888863456666544

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.71  E-value=0.00018  Score=62.92  Aligned_cols=115  Identities=14%  Similarity=0.053  Sum_probs=73.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchh-hhhHhhhC-CCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKS-KVDLLKSL-PGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+|+ |.+|+.++..|+..|.  +|.++++ +..... ....+... +.......+...|  +    .+.++++|+
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~-~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDv   72 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDI-KDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDV   72 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECS-STTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-chHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCE
Confidence            78999996 9999999999999886  8999888 664321 11111110 0001123333222  2    246779999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ||-+|+...... ....+++..|+.....+.+.+.+...-..+|.+|-
T Consensus        73 Vii~ag~~~kpG-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           73 CIITAGLPRSPG-MSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             EEECCCC--------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             EEECCCCCCCCC-CCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            999998754332 22447889999999999999998863456666654

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.69  E-value=0.00032  Score=61.65  Aligned_cols=116  Identities=13%  Similarity=0.004  Sum_probs=76.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchh-hhhHhhhCC-CCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKS-KVDLLKSLP-GAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~-~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +|||.|+| +|.+|..++..|+..|. +|.++++ +..... ....+.... .......+...+  +    .+.++++|+
T Consensus         5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di-~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d----~~a~~~aDv   76 (321)
T 3p7m_A            5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDI-AQGMPNGKALDLLQTCPIEGVDFKVRGTN--D----YKDLENSDV   76 (321)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCCEEEES--C----GGGGTTCSE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeC-ChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C----HHHHCCCCE
Confidence            47999999 59999999999999887 9999888 765422 111222110 000122222111  2    247789999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ||.+|+...... ....+++..|+.....+++.+.+...-..+|.+|-
T Consensus        77 VIi~ag~p~k~G-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           77 VIVTAGVPRKPG-MSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             EEECCSCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEEcCCcCCCCC-CCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            999998654332 22447788899999999999988873346666654

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.67  E-value=0.00033  Score=60.55  Aligned_cols=116  Identities=16%  Similarity=0.127  Sum_probs=75.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCch--hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDK--SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+|| |.||+.++..|+.++  .++..++. +....  ...+.....+...........+  |.    +.++++|+
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di-~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~----~~~~~aDv   72 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI-AEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEI   72 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS-SHHHHHHHHHHHHHHHGGGTCCCEEEEES--CG----GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeC-CCCcchhhhhhhhcccccCCCCCeEecCC--CH----HHhCCCCE
Confidence            78999995 999999999998887  47888877 54221  1111111111111122333221  22    25779999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ||-.||...... ...++++..|..-.+.+.+.+.+...-..++.+|-.
T Consensus        73 VvitAG~prkpG-mtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNP  120 (294)
T 2x0j_A           73 IVVTAGLARKPG-MTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             EEECCCCCCCSS-SCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             EEEecCCCCCCC-CchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCc
Confidence            999999765443 235588999999999999999998733455555543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.67  E-value=0.00034  Score=61.15  Aligned_cols=114  Identities=16%  Similarity=0.152  Sum_probs=68.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      |||.|+|| |.+|..++..|+..|+  +|.++++ +...... ...+...........+...   +.    +.++++|+|
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~-~~~~~~~~~~~l~~~~~~~~~~~i~~~---~~----~a~~~aDvV   71 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDR-DEDRAQAEAEDIAHAAPVSHGTRVWHG---GH----SELADAQVV   71 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHTTSCCTTSCCEEEEE---CG----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-CHHHHHHHHHhhhhhhhhcCCeEEEEC---CH----HHhCCCCEE
Confidence            68999997 9999999999999998  9999988 6532211 1111111111122333321   22    357899999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |-+++...... ....+....|+.....+++.+.+...-..+|.+|-
T Consensus        72 Ii~~~~~~~~g-~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tN  117 (304)
T 2v6b_A           72 ILTAGANQKPG-ESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSN  117 (304)
T ss_dssp             EECC-------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSS
T ss_pred             EEcCCCCCCCC-CcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            99997544322 11336678888889999998887652335555443

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.67  E-value=0.00037  Score=61.34  Aligned_cols=118  Identities=19%  Similarity=0.059  Sum_probs=77.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ..+||.|+|+ |.+|..++..|+..|.  +|.++++ +..... ....+............+..+  |.   + .++++|
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di-~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~---~-~~~~aD   89 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDV-IEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY---S-VTANSK   89 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-CHHHHHHHHHHHHHTGGGCSCCEEEECS--SG---G-GGTTEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeC-ChHHHHHHHHhhhhhhhccCCCeEEEcC--CH---H-HhCCCC
Confidence            4589999997 9999999999999986  8998887 543211 111122211111122222221  22   2 578999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      +||.+||..... .....+.++.|+.-.+.+.+.+.+...-..++.+|-.
T Consensus        90 iVvi~aG~~~kp-G~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP  138 (331)
T 4aj2_A           90 LVIITAGARQQE-GESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP  138 (331)
T ss_dssp             EEEECCSCCCCT-TCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             EEEEccCCCCCC-CccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence            999999975433 2234588999999999999999888634567766653

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.65  E-value=0.00016  Score=64.30  Aligned_cols=97  Identities=14%  Similarity=0.205  Sum_probs=60.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++||.|.||+|++|+.+++.|.+.+. +++.+.+ ..+...++... ..+.+. ..+     .+.+.+   + +.++|+|
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s-~~~~g~~~~~~~~~~~g~-~~~-----~~~~~~---~-~~~vDvV   72 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTS-RRFAGEPVHFVHPNLRGR-TNL-----KFVPPE---K-LEPADIL   72 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBC-STTTTSBGGGTCGGGTTT-CCC-----BCBCGG---G-CCCCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEEC-chhhCchhHHhCchhcCc-ccc-----cccchh---H-hcCCCEE
Confidence            48999999999999999999998764 7777766 43322222211 001100 011     122222   2 4689999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |.+.+...                 +..++..+.+.|  .++|-.|+..
T Consensus        73 ~~a~g~~~-----------------s~~~a~~~~~aG--~~VId~Sa~~  102 (345)
T 2ozp_A           73 VLALPHGV-----------------FAREFDRYSALA--PVLVDLSADF  102 (345)
T ss_dssp             EECCCTTH-----------------HHHTHHHHHTTC--SEEEECSSTT
T ss_pred             EEcCCcHH-----------------HHHHHHHHHHCC--CEEEEcCccc
Confidence            99976432                 234556666777  5688888864

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.62  E-value=8.7e-05  Score=68.77  Aligned_cols=73  Identities=21%  Similarity=0.322  Sum_probs=59.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~V   83 (341)
                      +.|||+|.| .|.+|++|++.|.+.||+|+++.+ +..   .++.+....    ++..+.||.++++.++++ ++++|.+
T Consensus         2 ~~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~-d~~---~~~~~~~~~----~~~~i~Gd~~~~~~L~~Agi~~ad~~   72 (461)
T 4g65_A            2 NAMKIIILG-AGQVGGTLAENLVGENNDITIVDK-DGD---RLRELQDKY----DLRVVNGHASHPDVLHEAGAQDADML   72 (461)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEES-CHH---HHHHHHHHS----SCEEEESCTTCHHHHHHHTTTTCSEE
T ss_pred             CcCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEEC-CHH---HHHHHHHhc----CcEEEEEcCCCHHHHHhcCCCcCCEE
Confidence            359999999 699999999999999999999988 653   344443311    678999999999999887 5789988


Q ss_pred             EEe
Q 019415           84 FHV   86 (341)
Q Consensus        84 i~~   86 (341)
                      |-+
T Consensus        73 ia~   75 (461)
T 4g65_A           73 VAV   75 (461)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            754

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.61  E-value=0.0001  Score=63.24  Aligned_cols=37  Identities=30%  Similarity=0.501  Sum_probs=29.2

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEec
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLR   38 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r   38 (341)
                      |. .++|||+|+|++|.+|+.+++.+.+. |++|.++.+
T Consensus         1 ~~-~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d   38 (273)
T 1dih_A            1 MH-DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE   38 (273)
T ss_dssp             -C-CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred             CC-CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            44 23589999999999999999998864 688876554

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.59  E-value=0.00013  Score=65.00  Aligned_cols=74  Identities=19%  Similarity=0.219  Sum_probs=51.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~   79 (341)
                      .+++|||+||+|-||..+++.+...|.+|++++| +..+.   +.+..+     +.. ...|+.+.+++.+.+.     +
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~-~~~~~---~~~~~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~  238 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG-GEGKE---ELFRSI-----GGE-VFIDFTKEKDIVGAVLKATDGG  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-STTHH---HHHHHT-----TCC-EEEETTTCSCHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcC-CHHHH---HHHHHc-----CCc-eEEecCccHhHHHHHHHHhCCC
Confidence            4579999999999999999999999999999998 76543   333332     111 1236654333333332     5


Q ss_pred             CCEEEEecc
Q 019415           80 CDFVFHVAT   88 (341)
Q Consensus        80 ~d~Vi~~a~   88 (341)
                      +|+||++++
T Consensus       239 ~D~vi~~~g  247 (347)
T 2hcy_A          239 AHGVINVSV  247 (347)
T ss_dssp             EEEEEECSS
T ss_pred             CCEEEECCC
Confidence            899999987

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.57  E-value=9.5e-05  Score=65.55  Aligned_cols=74  Identities=23%  Similarity=0.204  Sum_probs=51.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh-----cC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI-----QG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-----~~   79 (341)
                      .+++|||+||+|-||..+++.+...|.+|++++| +..+   .+.+..+. .  .   ...|..+.+++.+.+     .+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~-~~~~---~~~~~~~g-~--~---~~~d~~~~~~~~~~~~~~~~~~  214 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG-SDEK---IAYLKQIG-F--D---AAFNYKTVNSLEEALKKASPDG  214 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEES-SHHH---HHHHHHTT-C--S---EEEETTSCSCHHHHHHHHCTTC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHhcC-C--c---EEEecCCHHHHHHHHHHHhCCC
Confidence            4579999999999999999999999999999988 6533   33333321 1  1   223665522233322     25


Q ss_pred             CCEEEEecc
Q 019415           80 CDFVFHVAT   88 (341)
Q Consensus        80 ~d~Vi~~a~   88 (341)
                      +|+||+++|
T Consensus       215 ~d~vi~~~g  223 (333)
T 1v3u_A          215 YDCYFDNVG  223 (333)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            899999988

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.54  E-value=0.00069  Score=59.26  Aligned_cols=114  Identities=13%  Similarity=0.075  Sum_probs=75.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      |||.|+|| |.+|..++..|+..+  .+|.++++ +..+... ...+.........+.+.. +  +    .+.++++|+|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di-~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~V   71 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDL-DRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAV   71 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEE
Confidence            68999997 999999999999987  68999888 6432221 112222111112344443 2  2    3357899999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |..++...... .........|+.....+.+.+.+...-.++|.+|-
T Consensus        72 ii~ag~~~~~g-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           72 VLAAGVAQRPG-ETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             EECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EECCCCCCCCC-cCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            99998754332 22346788899999999999888863456666544

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.51  E-value=0.0021  Score=56.77  Aligned_cols=116  Identities=13%  Similarity=0.049  Sum_probs=75.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-------eEEEEecCCCCchhhhh----HhhhCCCCCCceEEEecCCCChHHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-------IVHTTLRPNLEDKSKVD----LLKSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      ..||.|+||+|.||++|+..|+....       ++..++. +... ...+    .+... ...-....+.++     +..
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di-~~~~-~~~~Gva~DL~~~-~~~~~~~~~~~~-----~~~   95 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDI-EPAL-KALAGVEAELEDC-AFPLLDKVVVTA-----DPR   95 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC-GGGH-HHHHHHHHHHHHT-TCTTEEEEEEES-----CHH
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECC-CCcc-ccchhhhhhhhhc-CccCCCcEEEcC-----ChH
Confidence            35999999999999999998887532       6777766 3321 1111    12221 111122222221     246


Q ss_pred             HHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecc
Q 019415           75 NAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTAS  130 (341)
Q Consensus        75 ~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss  130 (341)
                      +.++++|+||-+||...... ...+++++.|..-.+.+.+.+.+.. .-.+++.+|-
T Consensus        96 ~a~~~advVvi~aG~prkpG-mtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           96 VAFDGVAIAIMCGAFPRKAG-MERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             HHTTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             HHhCCCCEEEECCCCCCCCC-CCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence            67899999999999765443 2355889999999999999998864 1235555554

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.50  E-value=0.0014  Score=57.39  Aligned_cols=115  Identities=15%  Similarity=0.055  Sum_probs=72.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCCchhhhh-HhhhC-CCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLEDKSKVD-LLKSL-PGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+|+ |.+|..++..|+..  |++|+++++ +........ .+... +.......+...  ++.   +. ++++|+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~-~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDv   72 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDV-VEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANSDI   72 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCCCE
Confidence            68999997 99999999999985  799999999 765433221 11110 000011112111  222   23 678999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ||-+++....... ...+++..|+.....+++.+.+...-.++|.+|.
T Consensus        73 Viiav~~p~~~g~-~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN  119 (310)
T 1guz_A           73 VIITAGLPRKPGM-TREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN  119 (310)
T ss_dssp             EEECCSCCCCTTC-CHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred             EEEeCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence            9999985432221 1336778889999999998887753345555543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.49  E-value=0.0014  Score=57.48  Aligned_cols=117  Identities=18%  Similarity=-0.024  Sum_probs=76.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhh-hhHhhhCCCCCCceEEE-ecCCCChHHHHHHhcCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFF-EAEIYDPDTFENAIQGC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~-~~Dl~~~~~~~~~~~~~   80 (341)
                      ..+||.|+|+ |.+|..++..|+..|.  +|.++++ +...... ...+...........+. ..|+      + .++++
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di-~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~------~-~~~da   90 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDV-MEDKLKGEMMDLEHGSLFLHTAKIVSGKDY------S-VSAGS   90 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECS-CHHHHHHHHHHHHHHGGGSCCSEEEEESSS------C-SCSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEC-CHHHHHHHHHHhhhhhhcccCCeEEEcCCH------H-HhCCC
Confidence            4589999998 9999999999999986  8999887 6543211 11111110011111222 2343      2 27799


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      |+||-+||...... ....+.+..|+.-.+.+.+.+.+...-..++.+|-.
T Consensus        91 DiVIitaG~p~kpG-~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNP  140 (330)
T 3ldh_A           91 KLVVITAGARQQEG-ESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPEL  140 (330)
T ss_dssp             SEEEECCSCCCCSS-CCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             CEEEEeCCCCCCCC-CCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCc
Confidence            99999999755432 224478889999999999999888634566666643

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.47  E-value=0.00013  Score=64.43  Aligned_cols=74  Identities=11%  Similarity=0.013  Sum_probs=51.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHH---HHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDT---FENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~---~~~~~~--~   79 (341)
                      .+++|||+||+|-||..+++.+...|++|++++| +..+   .+.+..+. .  .   ...|..+.+.   +.+...  +
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~-~~~~---~~~~~~~g-~--~---~~~~~~~~~~~~~~~~~~~~~~  209 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG-TAQK---AQSALKAG-A--W---QVINYREEDLVERLKEITGGKK  209 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES-SHHH---HHHHHHHT-C--S---EEEETTTSCHHHHHHHHTTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHcC-C--C---EEEECCCccHHHHHHHHhCCCC
Confidence            4579999999999999999999999999999988 6533   33333321 1  1   1235544433   333332  5


Q ss_pred             CCEEEEecc
Q 019415           80 CDFVFHVAT   88 (341)
Q Consensus        80 ~d~Vi~~a~   88 (341)
                      +|+||++++
T Consensus       210 ~D~vi~~~g  218 (327)
T 1qor_A          210 VRVVYDSVG  218 (327)
T ss_dssp             EEEEEECSC
T ss_pred             ceEEEECCc
Confidence            899999998

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.47  E-value=0.0012  Score=58.26  Aligned_cols=114  Identities=15%  Similarity=0.053  Sum_probs=71.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhh-hHhhh-CC--CCCCceEEEecCCCChHHHHHHhcCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKV-DLLKS-LP--GAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~-~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      +|||.|+|| |.+|..++..|+..|+ +|.+.++ +....... ..+.. ..  .....+... .|      + +.++++
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di-~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~al~~a   83 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDI-IEGVPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EYLQNS   83 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-STTHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEEC-CHHHHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HHHCCC
Confidence            469999997 9999999999999998 9999888 76543321 11111 00  011122221 22      2 467899


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |+||-+++.......+ ..+....|+.....+++.+.+...-..+|.+|-
T Consensus        84 D~VI~avg~p~k~g~t-r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN  132 (328)
T 2hjr_A           84 DVVIITAGVPRKPNMT-RSDLLTVNAKIVGSVAENVGKYCPNAFVICITN  132 (328)
T ss_dssp             SEEEECCSCCCCTTCC-SGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CEEEEcCCCCCCCCCc-hhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999999754422211 124567788888888888877652335555544

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.47  E-value=0.00023  Score=65.64  Aligned_cols=80  Identities=20%  Similarity=0.225  Sum_probs=51.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceEE-E-----ecCCCChHHHHHHhc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLIF-F-----EAEIYDPDTFENAIQ   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~-~-----~~Dl~~~~~~~~~~~   78 (341)
                      |||.|+| +|++|..++..|++.|++|++++| +...   .+.+...  +-..+++.- +     .+.+.-..++.++++
T Consensus         3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~-~~~~---v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~   77 (450)
T 3gg2_A            3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDT-DRNK---IEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVP   77 (450)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHH---HHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGG
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEEC-CHHH---HHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHh
Confidence            7999998 799999999999999999999998 6543   3333321  111111100 0     011111224566788


Q ss_pred             CCCEEEEeccCCc
Q 019415           79 GCDFVFHVATPLQ   91 (341)
Q Consensus        79 ~~d~Vi~~a~~~~   91 (341)
                      ++|+||-+.....
T Consensus        78 ~aDvViiaVptp~   90 (450)
T 3gg2_A           78 EADIIFIAVGTPA   90 (450)
T ss_dssp             GCSEEEECCCCCB
T ss_pred             cCCEEEEEcCCCc
Confidence            9999999886543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.46  E-value=0.001  Score=58.48  Aligned_cols=116  Identities=12%  Similarity=0.023  Sum_probs=71.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhh-hHhhhC-CCCCCceEEEe-cCCCChHHHHHHhcCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKV-DLLKSL-PGAETRLIFFE-AEIYDPDTFENAIQGCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~~-~Dl~~~~~~~~~~~~~d   81 (341)
                      +|||.|+|| |.+|..++..|+..|+ +|.++++ +....... ..+... ........+.. .|      + +.++++|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di-~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d------~-~al~~aD   74 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDI-VKNMPHGKALDTSHTNVMAYSNCKVSGSNT------Y-DDLAGAD   74 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-SSSHHHHHHHHHHTHHHHHTCCCCEEEECC------G-GGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHHhhhhhcCCCcEEEECCC------H-HHhCCCC
Confidence            479999997 9999999999999998 8888888 66442211 111110 00001111221 22      3 4678999


Q ss_pred             EEEEeccCCccccch----hHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           82 FVFHVATPLQHIDGY----LYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +||-+++........    ...+....|+.....+++.+.+...-..+|.+|-
T Consensus        75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  127 (322)
T 1t2d_A           75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN  127 (322)
T ss_dssp             EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999999754322111    0225567788888888888877752345555543

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.45  E-value=0.00036  Score=62.38  Aligned_cols=98  Identities=10%  Similarity=0.194  Sum_probs=60.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +||.|.||+|++|+.+++.|.+.+. ++..+.+ ..+...+....  .+.....+   ..|+.-.+  ++.++++|+||.
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~-~~~~g~~~~~~--~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~   88 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTA-DRKAGQSMESV--FPHLRAQK---LPTLVSVK--DADFSTVDAVFC   88 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBC-STTTTSCHHHH--CGGGTTSC---CCCCBCGG--GCCGGGCSEEEE
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeC-chhcCCCHHHh--CchhcCcc---cccceecc--hhHhcCCCEEEE
Confidence            6899999999999999999998864 8887766 43322222211  11111111   12332222  334568999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |.+...                 +...+..+ +.|  .++|-.|+..
T Consensus        89 atp~~~-----------------s~~~a~~~-~aG--~~VId~sa~~  115 (359)
T 1xyg_A           89 CLPHGT-----------------TQEIIKEL-PTA--LKIVDLSADF  115 (359)
T ss_dssp             CCCTTT-----------------HHHHHHTS-CTT--CEEEECSSTT
T ss_pred             cCCchh-----------------HHHHHHHH-hCC--CEEEECCccc
Confidence            976543                 23455566 667  4688888864

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.45  E-value=0.0003  Score=60.13  Aligned_cols=73  Identities=18%  Similarity=0.264  Sum_probs=45.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++||.|+||+|.+|+.+++.+.+. +.++.+. +| +.+.. .-.....+.+...       ++.-.+++++++.++|+|
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~-~~~~~-~G~d~gel~g~~~-------gv~v~~dl~~ll~~~DVV   77 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDR-TGSPQ-LGQDAGAFLGKQT-------GVALTDDIERVCAEADYL   77 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCC-TTCTT-TTSBTTTTTTCCC-------SCBCBCCHHHHHHHCSEE
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEe-cCccc-ccccHHHHhCCCC-------CceecCCHHHHhcCCCEE
Confidence            589999999999999999999886 5777774 55 43210 0011111111111       122223466667789999


Q ss_pred             EEec
Q 019415           84 FHVA   87 (341)
Q Consensus        84 i~~a   87 (341)
                      |++.
T Consensus        78 IDfT   81 (272)
T 4f3y_A           78 IDFT   81 (272)
T ss_dssp             EECS
T ss_pred             EEcC
Confidence            9996

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.45  E-value=0.0012  Score=57.92  Aligned_cols=107  Identities=23%  Similarity=0.140  Sum_probs=67.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|||.|+|+ |.+|..++..|+..|+  +|++++| +...... ...+...........+...  ++.    +.++++|
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~-~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD   77 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDI-AKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDAD   77 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeC-ChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCC
Confidence            4689999997 9999999999999998  9999988 6533220 1111111001112222222  122    2467899


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcC
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG  120 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~  120 (341)
                      +||-+++...... ....+....|+.....+++.+.+.+
T Consensus        78 ~Vii~v~~~~~~g-~~r~~~~~~n~~~~~~~~~~i~~~~  115 (319)
T 1lld_A           78 MVVITAGPRQKPG-QSRLELVGATVNILKAIMPNLVKVA  115 (319)
T ss_dssp             EEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEECCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999997544322 1233667788888888888887754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.41  E-value=8e-05  Score=57.43  Aligned_cols=71  Identities=14%  Similarity=0.199  Sum_probs=49.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++.+| +..+.   +.+....    +....     ..+++.+.++++|+||.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r-~~~~~---~~~a~~~----~~~~~-----~~~~~~~~~~~~Divi~   86 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGR-NIDHV---RAFAEKY----EYEYV-----LINDIDSLIKNNDVIIT   86 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEES-CHHHH---HHHHHHH----TCEEE-----ECSCHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC-CHHHH---HHHHHHh----CCceE-----eecCHHHHhcCCCEEEE
Confidence            579999995 99999999999999999999988 65432   2222110    12222     12335667789999999


Q ss_pred             eccCC
Q 019415           86 VATPL   90 (341)
Q Consensus        86 ~a~~~   90 (341)
                      +.+..
T Consensus        87 at~~~   91 (144)
T 3oj0_A           87 ATSSK   91 (144)
T ss_dssp             CSCCS
T ss_pred             eCCCC
Confidence            98755

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.40  E-value=0.00046  Score=61.38  Aligned_cols=97  Identities=19%  Similarity=0.091  Sum_probs=63.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~   79 (341)
                      .+++|||+||+|-+|..+++.+...|.+|++++| +..+.   +.+..+ +.  . ..  .|..+.+   .+.+...  +
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~-~~~~~---~~~~~~-ga--~-~~--~d~~~~~~~~~~~~~~~~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAG-SEDKL---RRAKAL-GA--D-ET--VNYTHPDWPKEVRRLTGGKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEES-SHHHH---HHHHHH-TC--S-EE--EETTSTTHHHHHHHHTTTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeC-CHHHH---HHHHhc-CC--C-EE--EcCCcccHHHHHHHHhCCCC
Confidence            4679999999999999999999999999999988 65433   333332 11  1 12  3555432   3334332  6


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      +|+||++++ ...                ....++.++..|   +++.+++.
T Consensus       236 ~d~vi~~~g-~~~----------------~~~~~~~l~~~G---~~v~~g~~  267 (343)
T 2eih_A          236 ADKVVDHTG-ALY----------------FEGVIKATANGG---RIAIAGAS  267 (343)
T ss_dssp             EEEEEESSC-SSS----------------HHHHHHHEEEEE---EEEESSCC
T ss_pred             ceEEEECCC-HHH----------------HHHHHHhhccCC---EEEEEecC
Confidence            899999998 211                223445555444   88887764

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.40  E-value=0.0025  Score=56.86  Aligned_cols=118  Identities=9%  Similarity=0.053  Sum_probs=74.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--e---EEEEecCCCCc-hhhh----hHhhhCC-CCCCceEEEecCCCChHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--I---VHTTLRPNLED-KSKV----DLLKSLP-GAETRLIFFEAEIYDPDTF   73 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~---V~~~~r~~~~~-~~~~----~~~~~~~-~~~~~~~~~~~Dl~~~~~~   73 (341)
                      +++||.|+||+|.||.+++-.|+..+.  +   |..... +... ..++    -.+.... .....+..  .+     ..
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~-d~~~~~~~~~G~amDL~h~~~p~~~~v~i--~~-----~~  102 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLL-GSERSFQALEGVAMELEDSLYPLLREVSI--GI-----DP  102 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEE-CCGGGHHHHHHHHHHHHTTTCTTEEEEEE--ES-----CH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEec-CccchhhhhHHHHHhHHhhhhhhcCCcEE--ec-----CC
Confidence            347999999999999999999998762  2   554333 2221 1111    1122111 11112222  11     23


Q ss_pred             HHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc-CCcCEEEEeccc
Q 019415           74 ENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS-GTVKRLIYTASV  131 (341)
Q Consensus        74 ~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~~I~~Ss~  131 (341)
                      .+.++++|+||-+||..... .....++++.|+.-.+.+.+++.+. +.-..+|.+|-.
T Consensus       103 y~~~~daDvVVitag~prkp-G~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP  160 (375)
T 7mdh_A          103 YEVFEDVDWALLIGAKPRGP-GMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP  160 (375)
T ss_dssp             HHHTTTCSEEEECCCCCCCT-TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             HHHhCCCCEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc
Confidence            66788999999999875433 2234588999999999999999875 323566666653

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.40  E-value=0.00032  Score=61.27  Aligned_cols=83  Identities=12%  Similarity=0.078  Sum_probs=55.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +++++||+|+ |-+|+.++..|.+.|. +|+++.| +.++..+.+.+.. +... .+......++.+.+.+.+.+.++|+
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nR-t~~~~~~a~~la~~~~~~-~~~~v~~~~~~~l~~~~~~l~~~Di  223 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNR-KDDFFEKAVAFAKRVNEN-TDCVVTVTDLADQHAFTEALASADI  223 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEEC-SSTHHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHHCSE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEEC-CCchHHHHHHHHHHhhhc-cCcceEEechHhhhhhHhhccCceE
Confidence            4679999996 8899999999999997 8999999 7443333433322 1100 1233334455554445667778999


Q ss_pred             EEEeccCC
Q 019415           83 VFHVATPL   90 (341)
Q Consensus        83 Vi~~a~~~   90 (341)
                      ||++-...
T Consensus       224 IINaTp~G  231 (312)
T 3t4e_A          224 LTNGTKVG  231 (312)
T ss_dssp             EEECSSTT
T ss_pred             EEECCcCC
Confidence            99997654

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.40  E-value=0.00015  Score=64.32  Aligned_cols=94  Identities=17%  Similarity=0.262  Sum_probs=56.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC---eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +|||+|.||+|++|+.+++.|.++++   ++..+...+... ....    +.    +......|+ +++    .++++|+
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g-~~~~----~~----g~~i~~~~~-~~~----~~~~~Dv   71 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG-QRMG----FA----ESSLRVGDV-DSF----DFSSVGL   71 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT-CEEE----ET----TEEEECEEG-GGC----CGGGCSE
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCC-Cccc----cC----CcceEEecC-CHH----HhcCCCE
Confidence            47899999999999999999997754   455554202111 0000    10    111111122 122    2468999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ||.+.+..                 .+..++..+.+.| + ++|.+|+..
T Consensus        72 V~~a~g~~-----------------~s~~~a~~~~~aG-~-kvId~Sa~~  102 (340)
T 2hjs_A           72 AFFAAAAE-----------------VSRAHAERARAAG-C-SVIDLSGAL  102 (340)
T ss_dssp             EEECSCHH-----------------HHHHHHHHHHHTT-C-EEEETTCTT
T ss_pred             EEEcCCcH-----------------HHHHHHHHHHHCC-C-EEEEeCCCC
Confidence            99986532                 1345667777778 4 578888865

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.38  E-value=0.0012  Score=58.11  Aligned_cols=113  Identities=21%  Similarity=0.141  Sum_probs=72.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhh-Hhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVD-LLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+|+ |.+|..++..|++.|+  +|++++| +........ .+.. .+ ......+..   ++.    +.++++|+
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~-~~~~~~~~~~~l~~~~~-~~~~~~i~~---~d~----~~~~~aDv   70 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDV-DKKRAEGDALDLIHGTP-FTRRANIYA---GDY----ADLKGSDV   70 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGG-GSCCCEEEE---CCG----GGGTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeC-ChHHHHHHHHHHHhhhh-hcCCcEEEe---CCH----HHhCCCCE
Confidence            68999997 9999999999999998  9999988 654322211 1111 11 111222222   232    24678999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ||-+++........ ..++...|+.....+++.+.+...-..+|.+|-
T Consensus        71 Viiav~~~~~~g~~-r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tN  117 (319)
T 1a5z_A           71 VIVAAGVPQKPGET-RLQLLGRNARVMKEIARNVSKYAPDSIVIVVTN  117 (319)
T ss_dssp             EEECCCCCCCSSCC-HHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEccCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            99999865533211 226677788888899888877652335555543

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.37  E-value=0.00034  Score=61.91  Aligned_cols=75  Identities=16%  Similarity=0.172  Sum_probs=52.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~   79 (341)
                      .+.+|||+||+|-||..+++.+...|++|++++| +..+   .+.+..+. .  .   ...|..+.+   .+.+...  +
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~-~~~~---~~~~~~~g-~--~---~~~d~~~~~~~~~i~~~~~~~~  214 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS-TEEK---AETARKLG-C--H---HTINYSTQDFAEVVREITGGKG  214 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEES-SHHH---HHHHHHHT-C--S---EEEETTTSCHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHcC-C--C---EEEECCCHHHHHHHHHHhCCCC
Confidence            4579999999999999999999999999999998 6533   33333321 1  1   123554433   3333332  5


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      +|+||+++|.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1wly_A          215 VDVVYDSIGK  224 (333)
T ss_dssp             EEEEEECSCT
T ss_pred             CeEEEECCcH
Confidence            8999999985

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.36  E-value=0.0004  Score=62.03  Aligned_cols=74  Identities=16%  Similarity=0.115  Sum_probs=51.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~   79 (341)
                      .+.+|||+||+|-||..+++.+...|.+|++++| +..+   .+.+..+. .  .   ...|..+.+   .+.+...  +
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~-~~~~---~~~~~~~g-a--~---~~~d~~~~~~~~~~~~~~~~~~  239 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAG-TEEG---QKIVLQNG-A--H---EVFNHREVNYIDKIKKYVGEKG  239 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SHHH---HHHHHHTT-C--S---EEEETTSTTHHHHHHHHHCTTC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeC-ChhH---HHHHHHcC-C--C---EEEeCCCchHHHHHHHHcCCCC
Confidence            4579999999999999999999999999999988 6543   33333331 1  1   123554443   3333333  6


Q ss_pred             CCEEEEecc
Q 019415           80 CDFVFHVAT   88 (341)
Q Consensus        80 ~d~Vi~~a~   88 (341)
                      +|+||++++
T Consensus       240 ~D~vi~~~G  248 (351)
T 1yb5_A          240 IDIIIEMLA  248 (351)
T ss_dssp             EEEEEESCH
T ss_pred             cEEEEECCC
Confidence            899999987

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.34  E-value=0.00043  Score=61.90  Aligned_cols=75  Identities=16%  Similarity=0.106  Sum_probs=51.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~   79 (341)
                      .+.+|||+||+|-||..+++.+...|.+|++++| +..+   .+.+..+. .  .   ...|..+.+   .+.+...  +
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~-~~~~---~~~~~~~g-~--~---~~~~~~~~~~~~~~~~~~~~~~  231 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG-SQKK---LQMAEKLG-A--A---AGFNYKKEDFSEATLKFTKGAG  231 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHHT-C--S---EEEETTTSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHcC-C--c---EEEecCChHHHHHHHHHhcCCC
Confidence            4578999999999999999999999999999998 6543   33333321 1  1   123444433   3333332  5


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      +|+||+++|.
T Consensus       232 ~d~vi~~~G~  241 (354)
T 2j8z_A          232 VNLILDCIGG  241 (354)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCc
Confidence            8999999984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.34  E-value=0.00079  Score=58.48  Aligned_cols=34  Identities=32%  Similarity=0.357  Sum_probs=29.9

Q ss_pred             CcE-EEEecC-c-----------------chHHHHHHHHHHHCCCeEEEEecC
Q 019415            6 NFK-VCVTGG-E-----------------GFVGSWLIKKLLDKGYIVHTTLRP   39 (341)
Q Consensus         6 ~~~-ilI~Ga-t-----------------G~iG~~l~~~L~~~g~~V~~~~r~   39 (341)
                      +++ ||||+| |                 |..|.++++.++++|++|+.+.||
T Consensus        36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~   88 (313)
T 1p9o_A           36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA   88 (313)
T ss_dssp             TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence            455 898765 7                 999999999999999999999983

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.33  E-value=0.0011  Score=58.38  Aligned_cols=101  Identities=15%  Similarity=0.201  Sum_probs=59.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCC---CchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNL---EDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~---~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |+||.|+||||++|..|++.|.+. .+++..+.+ +.   +...++... ..+.+. .++.+...  .+.+   ++++++
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s-~~~~~saGk~~~~~~p~~~~~-~~~~v~~~--~~~~---~~~~~~   76 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTV-SAQSNDAGKLISDLHPQLKGI-VELPLQPM--SDIS---EFSPGV   76 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEE-ETTCTTTTSBHHHHCGGGTTT-CCCBEEEE--SSGG---GTCTTC
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEe-cCchhhcCCchHHhCccccCc-cceeEecc--CCHH---HHhcCC
Confidence            579999999999999999999995 468777654 33   221222211 111110 12223222  0222   222689


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |+||.|.+...                 +..++..+.+.|  .++|=.|+..
T Consensus        77 Dvvf~a~p~~~-----------------s~~~~~~~~~~g--~~vIDlSa~f  109 (337)
T 3dr3_A           77 DVVFLATAHEV-----------------SHDLAPQFLEAG--CVVFDLSGAF  109 (337)
T ss_dssp             SEEEECSCHHH-----------------HHHHHHHHHHTT--CEEEECSSTT
T ss_pred             CEEEECCChHH-----------------HHHHHHHHHHCC--CEEEEcCCcc
Confidence            99998855321                 234555566777  5788888875

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.31  E-value=0.0015  Score=57.21  Aligned_cols=113  Identities=14%  Similarity=0.101  Sum_probs=70.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhh-Hhh-hCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVD-LLK-SLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+| +|.+|..++..|++.|  ++|++++| +........ .+. ........+.....|      + +.++++|+
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~d------~-~~~~~aDv   72 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDA-NEAKVKADQIDFQDAMANLEAHGNIVIND------W-AALADADV   72 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGGGSSSCCEEEESC------G-GGGTTCSE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcC-CHHHHHHHHHHHHhhhhhcCCCeEEEeCC------H-HHhCCCCE
Confidence            7899999 8999999999999999  89999988 654322221 111 110011123332222      2 35678999


Q ss_pred             EEEeccCCcc----ccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           83 VFHVATPLQH----IDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        83 Vi~~a~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      ||-+++....    ... ........|+.....+++.+.+...-..+|.+|
T Consensus        73 Viiav~~~~~~~~~~g~-~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           73 VISTLGNIKLQQDNPTG-DRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             EEECCSCGGGTC--------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEecCCcccCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            9999886442    111 122566778888888888887765223455443

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.31  E-value=0.0006  Score=56.34  Aligned_cols=67  Identities=21%  Similarity=0.203  Sum_probs=48.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+|+|+| +|.+|+.+++.|.+.|++|++.+| +...   .+.+..     .++...        ++.++++++|+||
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r-~~~~---~~~~~~-----~g~~~~--------~~~~~~~~~DvVi   88 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSR-NPKR---TARLFP-----SAAQVT--------FQEEAVSSPEVIF   88 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEES-SHHH---HHHHSB-----TTSEEE--------EHHHHTTSCSEEE
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHH-----cCCcee--------cHHHHHhCCCEEE
Confidence            357899999 899999999999999999999988 6532   222222     133321        3556778999999


Q ss_pred             EeccC
Q 019415           85 HVATP   89 (341)
Q Consensus        85 ~~a~~   89 (341)
                      .+...
T Consensus        89 ~av~~   93 (215)
T 2vns_A           89 VAVFR   93 (215)
T ss_dssp             ECSCG
T ss_pred             ECCCh
Confidence            88763

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.31  E-value=0.0022  Score=54.19  Aligned_cols=104  Identities=16%  Similarity=0.182  Sum_probs=65.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCch----------------hhh----hHhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDK----------------SKV----DLLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------------~~~----~~~~~~~~~~~~~~~~~   64 (341)
                      .++|+|+| .|-+|+++++.|+..|. +|+++++ +.-..                .+.    +.+..+.. .-.+..+.
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~-d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~~~  107 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF-DTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP-HIAITPVN  107 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC-CBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEEEC
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcC-CCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC-CcEEEEEe
Confidence            36899999 58899999999999995 8888887 65110                122    22222211 11355566


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      .+++ .+.+.+.++++|+||.+....                ..-..+.++|.+.+  ..+|+.+..
T Consensus       108 ~~~~-~~~~~~~~~~~DvVi~~~d~~----------------~~~~~l~~~~~~~~--~p~i~~~~~  155 (249)
T 1jw9_B          108 ALLD-DAELAALIAEHDLVLDCTDNV----------------AVRNQLNAGCFAAK--VPLVSGAAI  155 (249)
T ss_dssp             SCCC-HHHHHHHHHTSSEEEECCSSH----------------HHHHHHHHHHHHHT--CCEEEEEEE
T ss_pred             ccCC-HhHHHHHHhCCCEEEEeCCCH----------------HHHHHHHHHHHHcC--CCEEEeeec
Confidence            6665 456777888999999985321                11234566677777  446665544

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.30  E-value=0.0017  Score=57.95  Aligned_cols=94  Identities=21%  Similarity=0.332  Sum_probs=56.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC---eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++||.|+||||++|..|++.|.++++   ++..+.- ..+......    +.  ...+.+...|   ++    .++++|+
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as-~~saG~~~~----~~--~~~~~~~~~~---~~----~~~~~Dv   67 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS-ARSAGKSLK----FK--DQDITIEETT---ET----AFEGVDI   67 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEEC-TTTTTCEEE----ET--TEEEEEEECC---TT----TTTTCSE
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEc-cccCCCcce----ec--CCCceEeeCC---HH----HhcCCCE
Confidence            47999999999999999999999765   3444432 211111111    00  0122222222   11    2468999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ||.|.+...                 +...+..+.+.|  .++|=.|+..
T Consensus        68 vf~a~~~~~-----------------s~~~a~~~~~~G--~~vIDlSa~~   98 (366)
T 3pwk_A           68 ALFSAGSST-----------------SAKYAPYAVKAG--VVVVDNTSYF   98 (366)
T ss_dssp             EEECSCHHH-----------------HHHHHHHHHHTT--CEEEECSSTT
T ss_pred             EEECCChHh-----------------HHHHHHHHHHCC--CEEEEcCCcc
Confidence            999875321                 334555666777  4688888864

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.29  E-value=0.00092  Score=59.67  Aligned_cols=32  Identities=28%  Similarity=0.413  Sum_probs=28.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC-CeEEEEec
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLR   38 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r   38 (341)
                      +||.|.||+|++|+.+++.|.+.+ .+|+.+.|
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~   41 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAA   41 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence            699999999999999999998875 58888765

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.29  E-value=0.0012  Score=60.54  Aligned_cols=96  Identities=15%  Similarity=0.234  Sum_probs=64.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-C---eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecC--CCCh-HHHHHHhc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-Y---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAE--IYDP-DTFENAIQ   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D--l~~~-~~~~~~~~   78 (341)
                      ++||+|+| .|-||+.+++.|++.+ +   +|++.+. ........+..        ++.+...+  -.|. +.+.++++
T Consensus        13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~-~~~~~~~~~~~--------g~~~~~~~Vdadnv~~~l~aLl~   82 (480)
T 2ph5_A           13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAA-EGTKVDVAQQY--------GVSFKLQQITPQNYLEVIGSTLE   82 (480)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEES-SCCSCCHHHHH--------TCEEEECCCCTTTHHHHTGGGCC
T ss_pred             CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEecc-chhhhhHHhhc--------CCceeEEeccchhHHHHHHHHhc
Confidence            37899999 9999999999999974 4   6888766 54432111111        23444444  4554 34566787


Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +.|+|||++-...                 ...++++|.+.|    +-|++++.
T Consensus        83 ~~DvVIN~s~~~~-----------------~l~Im~acleaG----v~YlDTa~  115 (480)
T 2ph5_A           83 ENDFLIDVSIGIS-----------------SLALIILCNQKG----ALYINAAT  115 (480)
T ss_dssp             TTCEEEECCSSSC-----------------HHHHHHHHHHHT----CEEEESSC
T ss_pred             CCCEEEECCcccc-----------------CHHHHHHHHHcC----CCEEECCC
Confidence            7799999654332                 346899999998    45666654

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.29  E-value=0.0019  Score=56.74  Aligned_cols=116  Identities=14%  Similarity=0.021  Sum_probs=72.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhh-hHhhhC---CCCCCceEEEecCCCChHHHHHHhcC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKV-DLLKSL---PGAETRLIFFEAEIYDPDTFENAIQG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (341)
                      ++|||.|+|+ |.+|..++..|+..|+ +|+++++ +....... ..+...   ......+... .|      + +.+++
T Consensus         3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~-~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~a~~~   72 (317)
T 2ewd_A            3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDI-AEGIPQGKALDITHSMVMFGSTSKVIGT-DD------Y-ADISG   72 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SSSHHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GGGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeC-CchHHHHHHHHHHhhhhhcCCCcEEEEC-CC------H-HHhCC
Confidence            3489999997 9999999999999998 9999988 76543321 011110   0001122211 22      2 35779


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      +|+||-+++....... ..++....|......+++.+.+...-..+|.+|..
T Consensus        73 aDiVi~avg~p~~~g~-~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp  123 (317)
T 2ewd_A           73 SDVVIITASIPGRPKD-DRSELLFGNARILDSVAEGVKKYCPNAFVICITNP  123 (317)
T ss_dssp             CSEEEECCCCSSCCSS-CGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred             CCEEEEeCCCCCCCCC-cHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence            9999999986543321 12345566777777888887776523455555544

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.28  E-value=0.0002  Score=63.73  Aligned_cols=74  Identities=24%  Similarity=0.268  Sum_probs=50.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhh-hCCCCCCceEEEecCCCCh----HHHHHHh-c
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLK-SLPGAETRLIFFEAEIYDP----DTFENAI-Q   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~----~~~~~~~-~   78 (341)
                      .+++|||+||+|-||..+++.+...|.+|++++| +..   +.+.+. .+ +.  . .  ..|..+.    +.+.+.. .
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~-~~~---~~~~~~~~~-g~--~-~--~~d~~~~~~~~~~~~~~~~~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAG-SKE---KVDLLKTKF-GF--D-D--AFNYKEESDLTAALKRCFPN  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHH---HHHHHHHTS-CC--S-E--EEETTSCSCSHHHHHHHCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHH---HHHHHHHHc-CC--c-e--EEecCCHHHHHHHHHHHhCC
Confidence            4579999999999999999999999999999988 643   334343 22 11  1 1  2255443    2233322 2


Q ss_pred             CCCEEEEecc
Q 019415           79 GCDFVFHVAT   88 (341)
Q Consensus        79 ~~d~Vi~~a~   88 (341)
                      ++|+||++++
T Consensus       225 ~~d~vi~~~g  234 (345)
T 2j3h_A          225 GIDIYFENVG  234 (345)
T ss_dssp             CEEEEEESSC
T ss_pred             CCcEEEECCC
Confidence            5899999987

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.28  E-value=0.00032  Score=62.22  Aligned_cols=74  Identities=23%  Similarity=0.219  Sum_probs=50.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHH---HHHHh-cC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDT---FENAI-QG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~---~~~~~-~~   79 (341)
                      .+++|||+||+|-||..+++.+...|.+|++++| +..   +.+.+ +.+. .  . .  ..|..+.+.   +.+.. .+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~---~~~~~~~~~g-~--~-~--~~~~~~~~~~~~~~~~~~~~  218 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAG-GAE---KCRFLVEELG-F--D-G--AIDYKNEDLAAGLKRECPKG  218 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHH---HHHHHHHTTC-C--S-E--EEETTTSCHHHHHHHHCTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHH---HHHHHHHHcC-C--C-E--EEECCCHHHHHHHHHhcCCC
Confidence            4679999999999999999999999999999988 653   33444 3321 1  1 1  234444332   22222 25


Q ss_pred             CCEEEEecc
Q 019415           80 CDFVFHVAT   88 (341)
Q Consensus        80 ~d~Vi~~a~   88 (341)
                      +|+||++++
T Consensus       219 ~d~vi~~~g  227 (336)
T 4b7c_A          219 IDVFFDNVG  227 (336)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            899999987

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.27  E-value=0.0017  Score=54.52  Aligned_cols=32  Identities=22%  Similarity=0.426  Sum_probs=28.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC-CCeEEEEec
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLR   38 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r   38 (341)
                      |||.|+|++|.+|+.+++.+.+. +++|.+..+
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d   33 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELD   33 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEc
Confidence            58999999999999999999876 899887766

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.25  E-value=0.0007  Score=60.66  Aligned_cols=76  Identities=24%  Similarity=0.255  Sum_probs=54.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +++|+|+|+ |-+|+.+++.|...|.+|++++| +..+.........     ..+..+   ..+.+++.+.+.++|+||+
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr-~~~r~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~DvVI~  236 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDI-NVERLSYLETLFG-----SRVELL---YSNSAEIETAVAEADLLIG  236 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHG-----GGSEEE---ECCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-CHHHHHHHHHhhC-----ceeEee---eCCHHHHHHHHcCCCEEEE
Confidence            479999998 99999999999999999999999 7644333322211     012122   1245567778889999999


Q ss_pred             eccCCc
Q 019415           86 VATPLQ   91 (341)
Q Consensus        86 ~a~~~~   91 (341)
                      +++...
T Consensus       237 ~~~~~~  242 (361)
T 1pjc_A          237 AVLVPG  242 (361)
T ss_dssp             CCCCTT
T ss_pred             CCCcCC
Confidence            987643

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.25  E-value=0.00038  Score=62.26  Aligned_cols=72  Identities=24%  Similarity=0.174  Sum_probs=50.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChH---HHHHHhc-CC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPD---TFENAIQ-GC   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~---~~~~~~~-~~   80 (341)
                      ++|||+||+|-||..+++.+...|. +|++++| +..   +.+.+.. + +.  .   ...|..+.+   .+.+... ++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~-~~~---~~~~~~~~~-g~--~---~~~d~~~~~~~~~~~~~~~~~~  231 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICG-THE---KCILLTSEL-GF--D---AAINYKKDNVAEQLRESCPAGV  231 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEES-CHH---HHHHHHHTS-CC--S---EEEETTTSCHHHHHHHHCTTCE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeC-CHH---HHHHHHHHc-CC--c---eEEecCchHHHHHHHHhcCCCC
Confidence            7999999999999999999999999 9999988 643   3333333 2 11  1   123555433   2333222 58


Q ss_pred             CEEEEecc
Q 019415           81 DFVFHVAT   88 (341)
Q Consensus        81 d~Vi~~a~   88 (341)
                      |+||+++|
T Consensus       232 d~vi~~~G  239 (357)
T 2zb4_A          232 DVYFDNVG  239 (357)
T ss_dssp             EEEEESCC
T ss_pred             CEEEECCC
Confidence            99999988

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.22  E-value=0.00032  Score=62.24  Aligned_cols=70  Identities=11%  Similarity=0.025  Sum_probs=57.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi~   85 (341)
                      ++|+|+|+ |.+|+.+++.|.+.|+ |+++++ +++.   .+ +..     .++.++.+|.++++.+.++ ++++|.||-
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~-~~~~---~~-~~~-----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~  183 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAED-ENVR---KK-VLR-----SGANFVHGDPTRVSDLEKANVRGARAVIV  183 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESC-GGGH---HH-HHH-----TTCEEEESCTTSHHHHHHTCSTTEEEEEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeC-Chhh---hh-HHh-----CCcEEEEeCCCCHHHHHhcChhhccEEEE
Confidence            58999995 9999999999999999 999888 6543   33 333     3788999999999999988 788999987


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +.+
T Consensus       184 ~~~  186 (336)
T 1lnq_A          184 DLE  186 (336)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            643

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.21  E-value=0.00048  Score=60.94  Aligned_cols=94  Identities=15%  Similarity=0.159  Sum_probs=58.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC---CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG---YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++||.|.||+|++|+.+++.|.+++   .+|+.+.. ..+......    +.  ...+.+...|   ++    .++++|+
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s-~~~~G~~~~----~~--~~~i~~~~~~---~~----~~~~vDv   68 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLAS-ERSEGKTYR----FN--GKTVRVQNVE---EF----DWSQVHI   68 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC-TTTTTCEEE----ET--TEEEEEEEGG---GC----CGGGCSE
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEEC-CCCCCCcee----ec--CceeEEecCC---hH----HhcCCCE
Confidence            5899999999999999999999983   46676653 211101000    10  1123332222   22    2358999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ||-|.+...                 +...+..+.+.|  .++|-.|+..
T Consensus        69 Vf~a~g~~~-----------------s~~~a~~~~~~G--~~vId~s~~~   99 (336)
T 2r00_A           69 ALFSAGGEL-----------------SAKWAPIAAEAG--VVVIDNTSHF   99 (336)
T ss_dssp             EEECSCHHH-----------------HHHHHHHHHHTT--CEEEECSSTT
T ss_pred             EEECCCchH-----------------HHHHHHHHHHcC--CEEEEcCCcc
Confidence            998865321                 345566677778  4788888874

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.20  E-value=0.00033  Score=60.14  Aligned_cols=74  Identities=15%  Similarity=0.231  Sum_probs=49.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhh-hCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLK-SLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++++++|+|+ |-+|+.++..|++.|.+|++..| +.++   .+.+. .+... ..+  ...|+   +.+.+  .++|+|
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R-~~~~---~~~la~~~~~~-~~~--~~~~~---~~~~~--~~~Div  184 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNR-TVSR---AEELAKLFAHT-GSI--QALSM---DELEG--HEFDLI  184 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-SHHH---HHHHHHHTGGG-SSE--EECCS---GGGTT--CCCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEEC-CHHH---HHHHHHHhhcc-CCe--eEecH---HHhcc--CCCCEE
Confidence            4579999998 67999999999999999999989 6543   22222 11110 122  12333   22222  589999


Q ss_pred             EEeccCCc
Q 019415           84 FHVATPLQ   91 (341)
Q Consensus        84 i~~a~~~~   91 (341)
                      |++++...
T Consensus       185 Vn~t~~~~  192 (271)
T 1nyt_A          185 INATSSGI  192 (271)
T ss_dssp             EECCSCGG
T ss_pred             EECCCCCC
Confidence            99998654

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.18  E-value=0.00038  Score=60.25  Aligned_cols=66  Identities=20%  Similarity=0.224  Sum_probs=47.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|.|+|+||.+|+.+++.|.+.|++|++.+| +...   .+.+...     ++.     ..+   ..+.++++|+||-
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r-~~~~---~~~~~~~-----g~~-----~~~---~~~~~~~aDvVi~   73 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEI-APEG---RDRLQGM-----GIP-----LTD---GDGWIDEADVVVL   73 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECC-SHHH---HHHHHHT-----TCC-----CCC---SSGGGGTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC-CHHH---HHHHHhc-----CCC-----cCC---HHHHhcCCCEEEE
Confidence            479999998899999999999999999999888 6533   3333221     221     112   2345678999998


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        74 av~   76 (286)
T 3c24_A           74 ALP   76 (286)
T ss_dssp             CSC
T ss_pred             cCC
Confidence            854

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.17  E-value=0.00055  Score=61.15  Aligned_cols=75  Identities=19%  Similarity=0.171  Sum_probs=51.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHh-cCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAI-QGC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~-~~~   80 (341)
                      .+.+|||+||+|-||..+++.+...|.+|++++| +..+.   +.+..+. .  . ..  .|..+.+   .+.+.. .++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~---~~~~~lG-a--~-~~--~~~~~~~~~~~~~~~~~~g~  236 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG-STGKC---EACERLG-A--K-RG--INYRSEDFAAVIKAETGQGV  236 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SHHHH---HHHHHHT-C--S-EE--EETTTSCHHHHHHHHHSSCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHH---HHHHhcC-C--C-EE--EeCCchHHHHHHHHHhCCCc
Confidence            4579999999999999999999999999999998 66443   3333321 1  1 12  2333332   233322 268


Q ss_pred             CEEEEeccC
Q 019415           81 DFVFHVATP   89 (341)
Q Consensus        81 d~Vi~~a~~   89 (341)
                      |+||++++.
T Consensus       237 Dvvid~~g~  245 (353)
T 4dup_A          237 DIILDMIGA  245 (353)
T ss_dssp             EEEEESCCG
T ss_pred             eEEEECCCH
Confidence            999999884

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.14  E-value=0.00026  Score=62.04  Aligned_cols=35  Identities=26%  Similarity=0.227  Sum_probs=31.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      +|+|+|+| .|.+|..++..|.+.|++|++++| +..
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r-~~~   37 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQ-WPA   37 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEEC-CHH
Confidence            47999999 599999999999999999999988 654

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.14  E-value=0.0032  Score=54.74  Aligned_cols=113  Identities=16%  Similarity=0.110  Sum_probs=72.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      .++||.|+|| |.+|..++..|+..|.  +|..+++ +.........+....  .+.+... .|      + +.++++|+
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di-~~~~~g~a~dl~~~~--~~~i~~t-~d------~-~~l~~aD~   80 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDL-SEGTKGATMDLEIFN--LPNVEIS-KD------L-SASAHSKV   80 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECC-C-----CHHHHHHHT--CTTEEEE-SC------G-GGGTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcC-CcchHHHHHHHhhhc--CCCeEEe-CC------H-HHHCCCCE
Confidence            3579999995 9999999999999998  8999888 653211222222211  1244432 22      2 45789999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ||-.++...  ......+....|+.-.+.+++.+.+...-..+|.+|-.
T Consensus        81 Vi~aag~~~--pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP  127 (303)
T 2i6t_A           81 VIFTVNSLG--SSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQP  127 (303)
T ss_dssp             EEECCCC------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSS
T ss_pred             EEEcCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCCh
Confidence            999998742  22223467788888899999988886523455555543

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.14  E-value=0.00058  Score=62.86  Aligned_cols=80  Identities=20%  Similarity=0.269  Sum_probs=50.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceEE-E-----ecCCCChHHHHHHhc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLIF-F-----EAEIYDPDTFENAIQ   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~-~-----~~Dl~~~~~~~~~~~   78 (341)
                      |+|.|+| +|++|..++..|++.|++|++++| +...   .+.+...  +-..++..- +     .+.+.-..++.++++
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~-~~~~---~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~   75 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDV-SSTK---IDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL   75 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHHH---HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhc
Confidence            6899998 899999999999999999999988 6543   3333221  100011000 0     011111223455677


Q ss_pred             CCCEEEEeccCCc
Q 019415           79 GCDFVFHVATPLQ   91 (341)
Q Consensus        79 ~~d~Vi~~a~~~~   91 (341)
                      ++|+||-+.....
T Consensus        76 ~aDvviiaVptp~   88 (436)
T 1mv8_A           76 DSDVSFICVGTPS   88 (436)
T ss_dssp             TCSEEEECCCCCB
T ss_pred             cCCEEEEEcCCCc
Confidence            8999999986443

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.14  E-value=0.0027  Score=56.48  Aligned_cols=96  Identities=16%  Similarity=0.129  Sum_probs=61.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh---HHHHHHh--cCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP---DTFENAI--QGCD   81 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~--~~~d   81 (341)
                      .+|||+||+|-||...++.+...|.+|+++++ +..+......+..      . +.+  |..+.   +.+.+..  .++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~-~~~~~~~~~~~Ga------~-~~~--~~~~~~~~~~v~~~~~~~g~D  235 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVR-RDEQIALLKDIGA------A-HVL--NEKAPDFEATLREVMKAEQPR  235 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-CGGGHHHHHHHTC------S-EEE--ETTSTTHHHHHHHHHHHHCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcCC------C-EEE--ECCcHHHHHHHHHHhcCCCCc
Confidence            68999999999999999999999999999998 7655333332211      1 122  33332   2333333  2699


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +||++++...                 ....++.++..   .++|.+++..
T Consensus       236 ~vid~~g~~~-----------------~~~~~~~l~~~---G~iv~~G~~~  266 (349)
T 3pi7_A          236 IFLDAVTGPL-----------------ASAIFNAMPKR---ARWIIYGRLD  266 (349)
T ss_dssp             EEEESSCHHH-----------------HHHHHHHSCTT---CEEEECCCSC
T ss_pred             EEEECCCChh-----------------HHHHHhhhcCC---CEEEEEeccC
Confidence            9999987311                 12344555444   4888877643

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.14  E-value=0.00079  Score=59.36  Aligned_cols=75  Identities=16%  Similarity=0.082  Sum_probs=51.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh---HHHHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP---DTFENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~   79 (341)
                      .+.+|||+||+|-||...++.+...|.+|++++| +..+   .+.+..+- .  . +.  .|..+.   +.+.+...  +
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~---~~~~~~~G-a--~-~~--~~~~~~~~~~~~~~~~~~~g  209 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVS-SPEK---AAHAKALG-A--W-ET--IDYSHEDVAKRVLELTDGKK  209 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-SHHH---HHHHHHHT-C--S-EE--EETTTSCHHHHHHHHTTTCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHcC-C--C-EE--EeCCCccHHHHHHHHhCCCC
Confidence            4679999999999999999999999999999988 6544   33333321 1  1 12  233333   33444433  5


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      +|+||++++.
T Consensus       210 ~Dvvid~~g~  219 (325)
T 3jyn_A          210 CPVVYDGVGQ  219 (325)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCh
Confidence            8999999884

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.12  E-value=0.0013  Score=58.34  Aligned_cols=75  Identities=12%  Similarity=0.071  Sum_probs=52.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh---HHHHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP---DTFENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~   79 (341)
                      .+.+|||+||+|-||...++.+...|.+|++++| +..+......+..      . ..  .|..+.   +.+.+...  +
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~lga------~-~~--~~~~~~~~~~~~~~~~~~~g  213 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTR-NNKHTEELLRLGA------A-YV--IDTSTAPLYETVMELTNGIG  213 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEES-SSTTHHHHHHHTC------S-EE--EETTTSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhCCC------c-EE--EeCCcccHHHHHHHHhCCCC
Confidence            4679999999999999999999989999999999 7765444333211      1 12  234333   23333332  6


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      +|+||++++.
T Consensus       214 ~Dvvid~~g~  223 (340)
T 3gms_A          214 ADAAIDSIGG  223 (340)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            8999999873

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.12  E-value=0.0015  Score=58.05  Aligned_cols=76  Identities=20%  Similarity=0.166  Sum_probs=52.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHhc--CCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAIQ--GCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d   81 (341)
                      .+.+|||+||+|-||...++.+...|.+|+++++ +..+......+..       -.++..+ .+ .+.+.+...  ++|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~-~~~~~~~~~~~ga-------~~v~~~~-~~~~~~v~~~~~~~g~D  229 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVN-RTAATEFVKSVGA-------DIVLPLE-EGWAKAVREATGGAGVD  229 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHTC-------SEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHhcCC-------cEEecCc-hhHHHHHHHHhCCCCce
Confidence            4579999999999999999999999999999998 7655433333211       1233333 22 233444443  589


Q ss_pred             EEEEeccC
Q 019415           82 FVFHVATP   89 (341)
Q Consensus        82 ~Vi~~a~~   89 (341)
                      +||++++.
T Consensus       230 vvid~~g~  237 (342)
T 4eye_A          230 MVVDPIGG  237 (342)
T ss_dssp             EEEESCC-
T ss_pred             EEEECCch
Confidence            99999884

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.10  E-value=0.0011  Score=58.74  Aligned_cols=75  Identities=17%  Similarity=0.092  Sum_probs=51.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh---HHHHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP---DTFENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--~   79 (341)
                      .+.+|||+||+|-||...++.+...|.+|++++| +..+   .+.+..+.   .. ..  .|..+.   +.+.+...  +
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~-~~~~---~~~~~~~g---a~-~~--~~~~~~~~~~~~~~~~~~~g  217 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVAS-TDEK---LKIAKEYG---AE-YL--INASKEDILRQVLKFTNGKG  217 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-SHHH---HHHHHHTT---CS-EE--EETTTSCHHHHHHHHTTTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHcC---Cc-EE--EeCCCchHHHHHHHHhCCCC
Confidence            4679999999999999999999999999999988 6543   33344331   11 12  233333   33444432  5


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      +|+||++++.
T Consensus       218 ~D~vid~~g~  227 (334)
T 3qwb_A          218 VDASFDSVGK  227 (334)
T ss_dssp             EEEEEECCGG
T ss_pred             ceEEEECCCh
Confidence            8999999884

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.09  E-value=0.0011  Score=59.07  Aligned_cols=75  Identities=16%  Similarity=0.148  Sum_probs=51.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHh--c
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAI--Q   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~   78 (341)
                      .+.+|||+||+|-||..+++.+... |.+|++++| +..+   .+.+..+.   .. .+  .|..+.+   .+.++.  .
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~-~~~~---~~~~~~~g---~~-~~--~~~~~~~~~~~~~~~~~~~  239 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV-REEA---VEAAKRAG---AD-YV--INASMQDPLAEIRRITESK  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES-SHHH---HHHHHHHT---CS-EE--EETTTSCHHHHHHHHTTTS
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcC-CHHH---HHHHHHhC---CC-EE--ecCCCccHHHHHHHHhcCC
Confidence            4579999999999999999999999 999999988 6543   33333321   11 12  2444433   345554  3


Q ss_pred             CCCEEEEeccC
Q 019415           79 GCDFVFHVATP   89 (341)
Q Consensus        79 ~~d~Vi~~a~~   89 (341)
                      ++|+||++++.
T Consensus       240 ~~d~vi~~~g~  250 (347)
T 1jvb_A          240 GVDAVIDLNNS  250 (347)
T ss_dssp             CEEEEEESCCC
T ss_pred             CceEEEECCCC
Confidence            68999999884

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.07  E-value=0.0013  Score=57.26  Aligned_cols=75  Identities=13%  Similarity=0.127  Sum_probs=52.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      .+++|+|+|+ |-+|+.++..|++.|. +|++..| +.++   .+.+.. +.... .      +..+.+++.+.+.++|+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR-~~~k---a~~la~~~~~~~-~------~~~~~~~~~~~~~~aDi  207 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANR-TVEK---AERLVREGDERR-S------AYFSLAEAETRLAEYDI  207 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECS-SHHH---HHHHHHHSCSSS-C------CEECHHHHHHTGGGCSE
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeC-CHHH---HHHHHHHhhhcc-C------ceeeHHHHHhhhccCCE
Confidence            4689999996 7799999999999997 9999999 6533   333322 21100 0      11123467777889999


Q ss_pred             EEEeccCCc
Q 019415           83 VFHVATPLQ   91 (341)
Q Consensus        83 Vi~~a~~~~   91 (341)
                      ||++.+...
T Consensus       208 vIn~t~~~~  216 (297)
T 2egg_A          208 IINTTSVGM  216 (297)
T ss_dssp             EEECSCTTC
T ss_pred             EEECCCCCC
Confidence            999988654

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.07  E-value=0.0011  Score=57.67  Aligned_cols=34  Identities=26%  Similarity=0.442  Sum_probs=31.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      ++|.|+||.|.+|..++..|.+.|++|++++| +.
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~-~~   55 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDR-ED   55 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECT-TC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEEC-Cc
Confidence            58999999999999999999999999999988 54

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.06  E-value=0.00094  Score=58.20  Aligned_cols=74  Identities=20%  Similarity=0.131  Sum_probs=51.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+.+|||+||+|-+|..+++.+...|.+|++++| +..+..   .+..+     +... ..|..+.+++.+.+.++|+||
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~-~~~~~~---~~~~~-----ga~~-~~~~~~~~~~~~~~~~~d~vi  194 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS-RPEKLA---LPLAL-----GAEE-AATYAEVPERAKAWGGLDLVL  194 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-SGGGSH---HHHHT-----TCSE-EEEGGGHHHHHHHTTSEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHH---HHHhc-----CCCE-EEECCcchhHHHHhcCceEEE
Confidence            4579999999999999999999999999999998 665433   33332     1111 134443133444457899999


Q ss_pred             EeccC
Q 019415           85 HVATP   89 (341)
Q Consensus        85 ~~a~~   89 (341)
                      + ++.
T Consensus       195 d-~g~  198 (302)
T 1iz0_A          195 E-VRG  198 (302)
T ss_dssp             E-CSC
T ss_pred             E-CCH
Confidence            9 774

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.05  E-value=0.0013  Score=59.30  Aligned_cols=77  Identities=18%  Similarity=0.140  Sum_probs=54.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+|+ |-||..+++.|...|.+|++++| +..+   .+.+...-+  ..+.   .+..+.+++.+.+.++|+||
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~-~~~~---l~~~~~~~g--~~~~---~~~~~~~~l~~~l~~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDI-NIDK---LRQLDAEFC--GRIH---TRYSSAYELEGAVKRADLVI  236 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHHTT--TSSE---EEECCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-CHHH---HHHHHHhcC--CeeE---eccCCHHHHHHHHcCCCEEE
Confidence            4579999997 99999999999999999999988 6543   222222101  1111   22334567888888999999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      .+++...
T Consensus       237 ~~~~~p~  243 (377)
T 2vhw_A          237 GAVLVPG  243 (377)
T ss_dssp             ECCCCTT
T ss_pred             ECCCcCC
Confidence            9887543

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.05  E-value=0.0005  Score=61.41  Aligned_cols=79  Identities=14%  Similarity=0.106  Sum_probs=49.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|||.|+| +|.+|..++..|++.|++|++.+| +......+......+...+++.+ ...+.-..++.++++++|+||-
T Consensus        29 ~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r-~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDvVil  105 (356)
T 3k96_A           29 KHPIAILG-AGSWGTALALVLARKGQKVRLWSY-ESDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTDILI  105 (356)
T ss_dssp             CSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECS-CHHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCEEEE
T ss_pred             CCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeC-CHHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCEEEE
Confidence            57999999 699999999999999999999999 65432222221111111112211 1111111346667889999997


Q ss_pred             ec
Q 019415           86 VA   87 (341)
Q Consensus        86 ~a   87 (341)
                      +.
T Consensus       106 aV  107 (356)
T 3k96_A          106 VV  107 (356)
T ss_dssp             CC
T ss_pred             CC
Confidence            74

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.04  E-value=0.00097  Score=57.47  Aligned_cols=77  Identities=17%  Similarity=0.177  Sum_probs=52.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +++++||+|+ |-+|+.++..|.+.|. +|+++.| +.++...+ +.+....   ..+.+...++   +++.+.+.++|+
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R-~~~~a~~la~~~~~~~---~~~~i~~~~~---~~l~~~l~~~Di  197 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADL-DTSRAQALADVINNAV---GREAVVGVDA---RGIEDVIAAADG  197 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECS-SHHHHHHHHHHHHHHH---TSCCEEEECS---TTHHHHHHHSSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEEC-CHHHHHHHHHHHHhhc---CCceEEEcCH---HHHHHHHhcCCE
Confidence            4679999997 8899999999999997 7999999 76543322 1222110   1223333343   346667778999


Q ss_pred             EEEeccC
Q 019415           83 VFHVATP   89 (341)
Q Consensus        83 Vi~~a~~   89 (341)
                      ||++...
T Consensus       198 VInaTp~  204 (283)
T 3jyo_A          198 VVNATPM  204 (283)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9999764

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.97  E-value=0.0012  Score=57.06  Aligned_cols=65  Identities=25%  Similarity=0.292  Sum_probs=47.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |+|.|+| .|.+|..+++.|++.|++|++.+| +...   .+.+...     ++..       ..++.++++++|+||-+
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~---~~~~~~~-----g~~~-------~~~~~~~~~~aDvvi~~   64 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNR-SPEK---AEELAAL-----GAER-------AATPCEVVESCPVTFAM   64 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SGGG---GHHHHHT-----TCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcC-CHHH---HHHHHHC-----CCee-------cCCHHHHHhcCCEEEEE
Confidence            7899999 799999999999999999999998 7644   2333221     2221       12455667778999877


Q ss_pred             cc
Q 019415           87 AT   88 (341)
Q Consensus        87 a~   88 (341)
                      ..
T Consensus        65 vp   66 (287)
T 3pef_A           65 LA   66 (287)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.95  E-value=0.002  Score=57.48  Aligned_cols=76  Identities=18%  Similarity=0.115  Sum_probs=54.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCC------------------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI------------------   67 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl------------------   67 (341)
                      +.+|+|+|+ |-+|...++.|...|.+|++++| +..+...+..+        +.+++..|.                  
T Consensus       184 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~-~~~~l~~~~~l--------Ga~~~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          184 PASALVLGV-GVAGLQALATAKRLGAKTTGYDV-RPEVAEQVRSV--------GAQWLDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHHTCEEEEECS-SGGGHHHHHHT--------TCEECCCC-------------CHHHHH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHc--------CCeEEeccccccccccchhhhhHHHHh
Confidence            469999995 99999999999999999999999 76543333322        223332221                  


Q ss_pred             CChHHHHHHhcCCCEEEEeccCCc
Q 019415           68 YDPDTFENAIQGCDFVFHVATPLQ   91 (341)
Q Consensus        68 ~~~~~~~~~~~~~d~Vi~~a~~~~   91 (341)
                      .+.+.+.+.++++|+||.++....
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~iPg  277 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALVPG  277 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             hhHHHHHHHHhcCCEEEECCCCCC
Confidence            123567888899999999875443

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.95  E-value=0.0028  Score=57.92  Aligned_cols=69  Identities=14%  Similarity=0.115  Sum_probs=53.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+| .|.+|+.+++.+.+.|++|++++. +... . ...+        .-+++..|..|.+.+.++.+++|+|+
T Consensus        34 ~~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~-~~~~-p-~~~~--------ad~~~~~~~~d~~~l~~~a~~~D~V~  101 (419)
T 4e4t_A           34 PGAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDP-DPAS-P-AGAV--------ADRHLRAAYDDEAALAELAGLCEAVS  101 (419)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CTTC-H-HHHH--------SSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECC-CCcC-c-hhhh--------CCEEEECCcCCHHHHHHHHhcCCEEE
Confidence            457999999 689999999999999999999866 5432 1 1111        12356689999999999999999998


Q ss_pred             E
Q 019415           85 H   85 (341)
Q Consensus        85 ~   85 (341)
                      .
T Consensus       102 ~  102 (419)
T 4e4t_A          102 T  102 (419)
T ss_dssp             E
T ss_pred             E
Confidence            3

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.94  E-value=0.0026  Score=57.29  Aligned_cols=69  Identities=17%  Similarity=0.214  Sum_probs=53.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+| .|.+|+.+++.+.+.|++|++++. +... . ..   .     -.-+++..|..|.+.+.++.+.+|+|+
T Consensus        11 ~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~-~~~~-p-~~---~-----~ad~~~~~~~~d~~~l~~~~~~~dvi~   78 (377)
T 3orq_A           11 FGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDP-SEDC-P-CR---Y-----VAHEFIQAKYDDEKALNQLGQKCDVIT   78 (377)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CTTC-T-TG---G-----GSSEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEC-CCCC-h-hh---h-----hCCEEEECCCCCHHHHHHHHHhCCcce
Confidence            357899999 788999999999999999999877 5432 1 00   0     012467789999999999999999885


Q ss_pred             E
Q 019415           85 H   85 (341)
Q Consensus        85 ~   85 (341)
                      .
T Consensus        79 ~   79 (377)
T 3orq_A           79 Y   79 (377)
T ss_dssp             E
T ss_pred             e
Confidence            4

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.93  E-value=0.004  Score=56.08  Aligned_cols=76  Identities=24%  Similarity=0.199  Sum_probs=54.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecC----------------CCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAE----------------IYD   69 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------l~~   69 (341)
                      +.+|+|+|+ |-+|...++.|...|.+|++++| +..+......+        +..++..+                +++
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~-~~~~l~~~~~~--------G~~~~~~~~~~~~d~~~~~~ya~e~s~  259 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDV-RPAAKEQVASL--------GAKFIAVEDEEFKAAETAGGYAKEMSG  259 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-STTHHHHHHHT--------TCEECCCCC-----------------C
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHc--------CCceeecccccccccccccchhhhcch
Confidence            468999995 99999999999999999999988 77553333322        12222221                223


Q ss_pred             h------HHHHHHhcCCCEEEEeccCCc
Q 019415           70 P------DTFENAIQGCDFVFHVATPLQ   91 (341)
Q Consensus        70 ~------~~~~~~~~~~d~Vi~~a~~~~   91 (341)
                      +      +.+.++++++|+||.++....
T Consensus       260 ~~~~~~~~~l~e~l~~aDVVI~tvlipg  287 (405)
T 4dio_A          260 EYQVKQAALVAEHIAKQDIVITTALIPG  287 (405)
T ss_dssp             HHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred             hhhhhhHhHHHHHhcCCCEEEECCcCCC
Confidence            2      478888999999999986554

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.92  E-value=0.0016  Score=56.99  Aligned_cols=67  Identities=21%  Similarity=0.301  Sum_probs=48.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+|.|+| .|.+|..+++.|++.|++|++.+| +....   +.+...     ++..       ..++.++++++|+||
T Consensus        20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr-~~~~~---~~l~~~-----g~~~-------~~~~~~~~~~aDvvi   82 (310)
T 3doj_A           20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNR-TLSKC---DELVEH-----GASV-------CESPAEVIKKCKYTI   82 (310)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SGGGG---HHHHHT-----TCEE-------CSSHHHHHHHCSEEE
T ss_pred             cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeC-CHHHH---HHHHHC-----CCeE-------cCCHHHHHHhCCEEE
Confidence            468999998 899999999999999999999999 76442   333221     2221       123556667789998


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      -+..
T Consensus        83 ~~vp   86 (310)
T 3doj_A           83 AMLS   86 (310)
T ss_dssp             ECCS
T ss_pred             EEcC
Confidence            8753

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.91  E-value=0.0017  Score=58.22  Aligned_cols=98  Identities=21%  Similarity=0.180  Sum_probs=62.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh---HHHHHHh-cCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP---DTFENAI-QGC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~-~~~   80 (341)
                      .+.+|||+||+|-||..+++.+...|.+|++++| +..   +.+.+..+- .  . ..+  |..+.   +.+.+.. .++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~-~~~---~~~~~~~~G-a--~-~~~--~~~~~~~~~~~~~~~~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCS-SDE---KSAFLKSLG-C--D-RPI--NYKTEPVGTVLKQEYPEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEES-SHH---HHHHHHHTT-C--S-EEE--ETTTSCHHHHHHHHCTTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEEC-CHH---HHHHHHHcC-C--c-EEE--ecCChhHHHHHHHhcCCCC
Confidence            4579999999999999999999999999999988 643   334443331 1  1 122  33332   2222222 258


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |+||++++.   .              .....++.++..|   ++|.+++..
T Consensus       233 D~vid~~g~---~--------------~~~~~~~~l~~~G---~iv~~g~~~  264 (362)
T 2c0c_A          233 DVVYESVGG---A--------------MFDLAVDALATKG---RLIVIGFIS  264 (362)
T ss_dssp             EEEEECSCT---H--------------HHHHHHHHEEEEE---EEEECCCGG
T ss_pred             CEEEECCCH---H--------------HHHHHHHHHhcCC---EEEEEeCCC
Confidence            999999873   1              1224455555544   888888754

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=96.88  E-value=0.0016  Score=58.02  Aligned_cols=100  Identities=14%  Similarity=0.125  Sum_probs=57.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhh--C-CCCC---CceEEEecCCCChHHHHHHhc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKS--L-PGAE---TRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~--~-~~~~---~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      ++||.|+||||++|..|++.|.+.. .++..+.. +.+...++.....  + +...   .+..+...   +++    .+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S-~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~   78 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAG-KGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMD   78 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEE-STTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEEC-chhcCCChhHhcccccccccccccccceEEeC---CHH----Hhc
Confidence            4799999999999999999888765 46666544 2222122221100  0 0000   01222221   222    236


Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ++|+||.|.+...                 +..++..+.+.|  .++|=.|+..
T Consensus        79 ~vDvvf~a~p~~~-----------------s~~~a~~~~~~G--~~vIDlSa~~  113 (359)
T 4dpk_A           79 DVDIIFSPLPQGA-----------------AGPVEEQFAKEG--FPVISNSPDH  113 (359)
T ss_dssp             TCCEEEECCCTTT-----------------HHHHHHHHHHTT--CEEEECSSTT
T ss_pred             CCCEEEECCChHH-----------------HHHHHHHHHHCC--CEEEEcCCCc
Confidence            8999999866433                 223455556667  5788888875

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=96.88  E-value=0.0016  Score=58.02  Aligned_cols=100  Identities=14%  Similarity=0.125  Sum_probs=57.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhh--C-CCCC---CceEEEecCCCChHHHHHHhc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKS--L-PGAE---TRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~--~-~~~~---~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      ++||.|+||||++|..|++.|.+.. .++..+.. +.+...++.....  + +...   .+..+...   +++    .+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S-~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~~----~~~   78 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAG-KGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DPK----LMD   78 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEE-STTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CGG----GCT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEEC-chhcCCChhHhcccccccccccccccceEEeC---CHH----Hhc
Confidence            4799999999999999999888765 46666544 2222122221100  0 0000   01222221   222    236


Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ++|+||.|.+...                 +..++..+.+.|  .++|=.|+..
T Consensus        79 ~vDvvf~a~p~~~-----------------s~~~a~~~~~~G--~~vIDlSa~~  113 (359)
T 4dpl_A           79 DVDIIFSPLPQGA-----------------AGPVEEQFAKEG--FPVISNSPDH  113 (359)
T ss_dssp             TCCEEEECCCTTT-----------------HHHHHHHHHHTT--CEEEECSSTT
T ss_pred             CCCEEEECCChHH-----------------HHHHHHHHHHCC--CEEEEcCCCc
Confidence            8999999866433                 223455556667  5788888875

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.87  E-value=0.0023  Score=55.71  Aligned_cols=68  Identities=16%  Similarity=0.075  Sum_probs=45.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+|.|+| .|.+|..+++.|++.|++|++.+| +...   .+.+...     +......|+      .++++++|+||
T Consensus         6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~---~~~~~~~-----g~~~~~~~~------~e~~~~aDvvi   69 (303)
T 3g0o_A            6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADL-NPQA---CANLLAE-----GACGAAASA------REFAGVVDALV   69 (303)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHH---HHHHHHT-----TCSEEESSS------TTTTTTCSEEE
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEEC-CHHH---HHHHHHc-----CCccccCCH------HHHHhcCCEEE
Confidence            457999998 899999999999999999999988 6543   3333321     121112222      33456778887


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      -+..
T Consensus        70 ~~vp   73 (303)
T 3g0o_A           70 ILVV   73 (303)
T ss_dssp             ECCS
T ss_pred             EECC
Confidence            7754

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.86  E-value=0.0066  Score=51.27  Aligned_cols=105  Identities=18%  Similarity=0.235  Sum_probs=63.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhhh----HhhhCCCCCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKVD----LLKSLPGAETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~----~~~~~~~~~~~~~~~~   64 (341)
                      ..+|+|+|+ |-+|+++++.|+..|. +++++++ +.-.                ..+.+    .+..+.. .-.++.+.
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~-d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~~~  104 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADD-DDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNP-DIQLTALQ  104 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECC-CBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEEEC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeC-CCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCC-CCEEEEEe
Confidence            468999996 5599999999999995 6777755 4211                01221    1222110 11344444


Q ss_pred             cCCCChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           65 AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      .+++ .+.+.+.++++|+||.+...        .        ..-..+-++|.+.+  ..+|+.+..+
T Consensus       105 ~~~~-~~~~~~~~~~~DvVi~~~d~--------~--------~~r~~l~~~~~~~~--~p~i~~~~~g  153 (251)
T 1zud_1          105 QRLT-GEALKDAVARADVVLDCTDN--------M--------ATRQEINAACVALN--TPLITASAVG  153 (251)
T ss_dssp             SCCC-HHHHHHHHHHCSEEEECCSS--------H--------HHHHHHHHHHHHTT--CCEEEEEEEB
T ss_pred             ccCC-HHHHHHHHhcCCEEEECCCC--------H--------HHHHHHHHHHHHhC--CCEEEEeccc
Confidence            4443 45677888899999998431        1        11234556677766  4577766544

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=96.86  E-value=0.0029  Score=54.29  Aligned_cols=77  Identities=16%  Similarity=0.152  Sum_probs=45.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +++||.|.|++|.+|+.+++.+.+. +.++.+...++.+.. .-.....+.+..      ..++.-.+++++++.++|+|
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~-~G~d~gel~G~~------~~gv~v~~dl~~ll~~aDVv   92 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSF-VDKDASILIGSD------FLGVRITDDPESAFSNTEGI   92 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTT-TTSBGGGGTTCS------CCSCBCBSCHHHHTTSCSEE
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccc-cccchHHhhccC------cCCceeeCCHHHHhcCCCEE
Confidence            3479999999999999999998876 578776643033210 000011111100      11121223566777789999


Q ss_pred             EEecc
Q 019415           84 FHVAT   88 (341)
Q Consensus        84 i~~a~   88 (341)
                      |.+..
T Consensus        93 IDFT~   97 (288)
T 3ijp_A           93 LDFSQ   97 (288)
T ss_dssp             EECSC
T ss_pred             EEcCC
Confidence            98853

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.86  E-value=0.0014  Score=57.66  Aligned_cols=67  Identities=19%  Similarity=0.278  Sum_probs=49.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+|.|+| .|.+|..+++.|++.|++|++.+| +..   +.+.+...     ++..       ..++.++++++|+||
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~---~~~~l~~~-----g~~~-------~~~~~e~~~~aDvVi   92 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNR-TPA---RAASLAAL-----GATI-------HEQARAAARDADIVV   92 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECS-CHH---HHHHHHTT-----TCEE-------ESSHHHHHTTCSEEE
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcC-CHH---HHHHHHHC-----CCEe-------eCCHHHHHhcCCEEE
Confidence            357999998 799999999999999999999988 653   33333331     2222       234667788899999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      -+..
T Consensus        93 ~~vp   96 (320)
T 4dll_A           93 SMLE   96 (320)
T ss_dssp             ECCS
T ss_pred             EECC
Confidence            8754

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.86  E-value=0.0011  Score=57.32  Aligned_cols=66  Identities=18%  Similarity=0.204  Sum_probs=47.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ||+|.|+| .|.+|..+++.|++.|++|++.+| +......   +...     ++..       ..+..++++++|+||-
T Consensus         1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr-~~~~~~~---~~~~-----g~~~-------~~~~~~~~~~advvi~   63 (287)
T 3pdu_A            1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNR-NPAKCAP---LVAL-----GARQ-------ASSPAEVCAACDITIA   63 (287)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECS-SGGGGHH---HHHH-----TCEE-------CSCHHHHHHHCSEEEE
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcC-CHHHHHH---HHHC-----CCee-------cCCHHHHHHcCCEEEE
Confidence            36899998 899999999999999999999999 7654332   2221     2211       1235556677899988


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        64 ~v~   66 (287)
T 3pdu_A           64 MLA   66 (287)
T ss_dssp             CCS
T ss_pred             EcC
Confidence            854

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=96.84  E-value=0.007  Score=54.65  Aligned_cols=69  Identities=17%  Similarity=0.165  Sum_probs=52.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+| .|.+|+.+++.+.+.|++|++++. +...          +...-.-..+..+..|.+.+.++++.+|+|.
T Consensus        13 ~~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~-~~~~----------~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~   80 (389)
T 3q2o_A           13 PGKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDP-TKNS----------PCAQVADIEIVASYDDLKAIQHLAEISDVVT   80 (389)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-STTC----------TTTTTCSEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeC-CCCC----------chHHhCCceEecCcCCHHHHHHHHHhCCEee
Confidence            357999999 788999999999999999999876 5432          0111122356688999999999999999885


Q ss_pred             E
Q 019415           85 H   85 (341)
Q Consensus        85 ~   85 (341)
                      .
T Consensus        81 ~   81 (389)
T 3q2o_A           81 Y   81 (389)
T ss_dssp             E
T ss_pred             e
Confidence            4

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=96.84  E-value=0.0011  Score=51.83  Aligned_cols=72  Identities=17%  Similarity=0.219  Sum_probs=50.9

Q ss_pred             cchHHHHHHHHHHHCCCeEEEEecCCCCchhh----hhHhhhCCCCCCceEEEecCCCCh--HHHHHHhc------CCCE
Q 019415           15 EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK----VDLLKSLPGAETRLIFFEAEIYDP--DTFENAIQ------GCDF   82 (341)
Q Consensus        15 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~------~~d~   82 (341)
                      +|+++...++.|++.|.+|++..| +......    .+.+...   ......+++|++++  +.+.++++      +.|+
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r-~~~e~~~~~~~~~~~~~~---G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dV  100 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLM-PDSSKDAHPDEGKLVTQA---GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDV  100 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECS-CTTSTTSCTTHHHHHHHT---TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECC-CcccccccccHHHHHHHc---CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCE
Confidence            568999999999999999988777 5433211    1222221   23577788999998  77776653      2399


Q ss_pred             EEEeccCC
Q 019415           83 VFHVATPL   90 (341)
Q Consensus        83 Vi~~a~~~   90 (341)
                      +|||||..
T Consensus       101 LVnnAgg~  108 (157)
T 3gxh_A          101 LVHCLANY  108 (157)
T ss_dssp             EEECSBSH
T ss_pred             EEECCCCC
Confidence            99999863

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=96.83  E-value=0.0028  Score=56.34  Aligned_cols=99  Identities=20%  Similarity=0.175  Sum_probs=58.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCC--------CCceEEEecCCCChHHHHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGA--------ETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      ++||.|.||+|++|+.+++.|.+.. .+|..+...+.+....+...  .+..        ...+.+  .|+ +++.    
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~--~~~-d~~~----   74 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDA--VKWIEQGDIPEEVQDLPI--VST-NYED----   74 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHH--CCCCSSSSCCHHHHTCBE--ECS-SGGG----
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHh--cCcccccccccCCceeEE--eeC-CHHH----
Confidence            5899999999999999999998875 47777752011111111111  1110        011222  222 3333    


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ++++|+||.+.+..                 .+..++..+.+.|  .++|-.|+..
T Consensus        75 ~~~vDvVf~atp~~-----------------~s~~~a~~~~~aG--~~VId~s~~~  111 (350)
T 2ep5_A           75 HKDVDVVLSALPNE-----------------LAESIELELVKNG--KIVVSNASPF  111 (350)
T ss_dssp             GTTCSEEEECCCHH-----------------HHHHHHHHHHHTT--CEEEECSSTT
T ss_pred             hcCCCEEEECCChH-----------------HHHHHHHHHHHCC--CEEEECCccc
Confidence            35899999775421                 1345667777888  4588777764

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.81  E-value=0.0031  Score=57.62  Aligned_cols=119  Identities=19%  Similarity=0.092  Sum_probs=65.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceE------EEecCCCChHHHHHHh
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLI------FFEAEIYDPDTFENAI   77 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~------~~~~Dl~~~~~~~~~~   77 (341)
                      +.+|.|+| .|++|..++..|++.|++|++++. +.   .+.+.+..-  +-.++++.      .-.+.+.-..+..+++
T Consensus        21 m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Di-d~---~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai   95 (444)
T 3vtf_A           21 MASLSVLG-LGYVGVVHAVGFALLGHRVVGYDV-NP---SIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAV   95 (444)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECS-CH---HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEEC-CH---HHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHH
Confidence            46899998 999999999999999999999987 55   445555431  10111100      0001111012345566


Q ss_pred             cCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           78 QGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        78 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ..+|++|=|.+........+.-..   -...+..+.+.++..+.-.-+|+-||..
T Consensus        96 ~~ad~~~I~VpTP~~~d~~~Dl~~---v~~a~~~I~~~l~~~~~g~lVV~eSTVp  147 (444)
T 3vtf_A           96 AATDATFIAVGTPPAPDGSADLRY---VEAAARAVGRGIRAKGRWHLVVVKSTVP  147 (444)
T ss_dssp             HTSSEEEECCCCCBCTTSSBCCHH---HHHHHHHHHHHHHHHCSCCEEEECSCCC
T ss_pred             hcCCceEEEecCCCCCCCCCCcHH---HHHHHHHHHHHHhhcCCCeEEEEeCCCC
Confidence            788999888764433221111011   1223344445554432125677777753

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.81  E-value=0.0012  Score=54.70  Aligned_cols=67  Identities=13%  Similarity=0.051  Sum_probs=45.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEE-EecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHT-TLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      +|||.|+| +|.+|..+++.|.+.|++|++ .+| +.+...   .+....    ++....   .+    .+.++++|+||
T Consensus        23 mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r-~~~~~~---~l~~~~----g~~~~~---~~----~~~~~~aDvVi   86 (220)
T 4huj_A           23 MTTYAIIG-AGAIGSALAERFTAAQIPAIIANSR-GPASLS---SVTDRF----GASVKA---VE----LKDALQADVVI   86 (220)
T ss_dssp             SCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTT-CGGGGH---HHHHHH----TTTEEE---CC----HHHHTTSSEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECC-CHHHHH---HHHHHh----CCCccc---Ch----HHHHhcCCEEE
Confidence            57999999 999999999999999999998 777 654422   221110    111111   11    23467899999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      -+..
T Consensus        87 lavp   90 (220)
T 4huj_A           87 LAVP   90 (220)
T ss_dssp             EESC
T ss_pred             EeCC
Confidence            8863

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.79  E-value=0.0027  Score=57.95  Aligned_cols=78  Identities=17%  Similarity=0.186  Sum_probs=48.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceEE-E---ecCCCChHHHHHHhc
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLIF-F---EAEIYDPDTFENAIQ   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~-~---~~Dl~~~~~~~~~~~   78 (341)
                      ++|||.|+| +|++|..++..|++ |++|++++| +...   .+.+...  +-..+++.- +   .+.+.-..++.++++
T Consensus        35 ~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~-~~~~---v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~  108 (432)
T 3pid_A           35 EFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDI-VQAK---VDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYR  108 (432)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECS-CHHH---HHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEec-CHHH---hhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHh
Confidence            357999999 79999999999998 999999998 6543   3333221  000000000 0   011111123566788


Q ss_pred             CCCEEEEecc
Q 019415           79 GCDFVFHVAT   88 (341)
Q Consensus        79 ~~d~Vi~~a~   88 (341)
                      ++|+||-+..
T Consensus       109 ~aDvViiaVP  118 (432)
T 3pid_A          109 NADYVIIATP  118 (432)
T ss_dssp             TCSEEEECCC
T ss_pred             CCCEEEEeCC
Confidence            9999988754

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.79  E-value=0.0015  Score=54.80  Aligned_cols=32  Identities=16%  Similarity=0.197  Sum_probs=27.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEE-ec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT-LR   38 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r   38 (341)
                      ||||.|+|+ |.+|+.+++.+.+.++++.+. +|
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~   35 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIEN   35 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEec
Confidence            589999999 999999999999987777664 44

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.78  E-value=0.0046  Score=52.73  Aligned_cols=57  Identities=16%  Similarity=0.198  Sum_probs=47.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++++|+|+++.+|+.++..|+..|..|++..| +.                             .++.+.++.+|+||
T Consensus       159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~-~t-----------------------------~~L~~~~~~ADIVI  208 (285)
T 3p2o_A          159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHI-KT-----------------------------KDLSLYTRQADLII  208 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT-TC-----------------------------SCHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-Cc-----------------------------hhHHHHhhcCCEEE
Confidence            5789999999999999999999999999999866 21                             23667888999999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      ...+...
T Consensus       209 ~Avg~p~  215 (285)
T 3p2o_A          209 VAAGCVN  215 (285)
T ss_dssp             ECSSCTT
T ss_pred             ECCCCCC
Confidence            9988543

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.78  E-value=0.01  Score=51.07  Aligned_cols=104  Identities=20%  Similarity=0.245  Sum_probs=65.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCc---------------hhhh----hHhhhCCCCCCceEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLED---------------KSKV----DLLKSLPGAETRLIFFEA   65 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~---------------~~~~----~~~~~~~~~~~~~~~~~~   65 (341)
                      ..+|+|+| .|-+|+++++.|+..| -+++++++ +.-.               ..|.    +.+..+.. .-.++.+..
T Consensus        36 ~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~-D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP-~v~v~~~~~  112 (292)
T 3h8v_A           36 TFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDY-DKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINP-DVLFEVHNY  112 (292)
T ss_dssp             GCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC-CBC------------CCTTSBHHHHHHHHHHHHCT-TSEEEEECC
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECC-CccChhhcccccCChhhcCchHHHHHHHHHHhhCC-CcEEEEecc
Confidence            46899999 6889999999999999 47777766 4411               1122    22222211 125666777


Q ss_pred             CCCChHHHHHHh-----------cCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           66 EIYDPDTFENAI-----------QGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        66 Dl~~~~~~~~~~-----------~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ++++.+.+..++           +++|+||.+...                ...-..+-++|.+.+  +.+|+.+.
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn----------------~~~R~~in~~c~~~~--~Pli~~gv  170 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN----------------FEARMTINTACNELG--QTWMESGV  170 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS----------------HHHHHHHHHHHHHHT--CCEEEEEE
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc----------------hhhhhHHHHHHHHhC--CCEEEeee
Confidence            777666666654           589999987421                111234567788877  45666544

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.77  E-value=0.0015  Score=56.78  Aligned_cols=65  Identities=14%  Similarity=0.147  Sum_probs=47.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|.|+| .|.+|..+++.|++.|++|++.+| +......   +...     ++..       ..++.++++ +|+||-
T Consensus        15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr-~~~~~~~---~~~~-----g~~~-------~~~~~~~~~-aDvvi~   76 (296)
T 3qha_A           15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDI-RIEAMTP---LAEA-----GATL-------ADSVADVAA-ADLIHI   76 (296)
T ss_dssp             CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECS-STTTSHH---HHHT-----TCEE-------CSSHHHHTT-SSEEEE
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeC-CHHHHHH---HHHC-----CCEE-------cCCHHHHHh-CCEEEE
Confidence            36899998 899999999999999999999999 7654332   2221     2221       124566677 899988


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        77 ~vp   79 (296)
T 3qha_A           77 TVL   79 (296)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            754

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=96.76  E-value=0.0051  Score=55.34  Aligned_cols=69  Identities=17%  Similarity=0.234  Sum_probs=52.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      ++|||+|+ |.+|+.+++.|.+.|++|++++. +.... .    ...     .-.++..|..|.+.+.+++.++|.|+..
T Consensus         2 ~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~-~~~~~-~----~~~-----~~~~~~~~~~d~~~l~~~~~~~d~v~~~   69 (380)
T 3ax6_A            2 KKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDP-TPRSP-A----GQV-----ADEQIVAGFFDSERIEDLVKGSDVTTYD   69 (380)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-STTCT-T----GGG-----SSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CCCCc-h----hhh-----CceEEECCCCCHHHHHHHHhcCCEEEec
Confidence            68999995 89999999999999999998876 43320 0    011     1135677889999898888899998864


Q ss_pred             c
Q 019415           87 A   87 (341)
Q Consensus        87 a   87 (341)
                      .
T Consensus        70 ~   70 (380)
T 3ax6_A           70 L   70 (380)
T ss_dssp             C
T ss_pred             c
Confidence            3

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.75  E-value=0.0043  Score=57.00  Aligned_cols=82  Identities=16%  Similarity=0.139  Sum_probs=52.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEE------EecCCCChHHHHHHhcC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIF------FEAEIYDPDTFENAIQG   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~------~~~Dl~~~~~~~~~~~~   79 (341)
                      ..+|.|+| .|++|..++..|++.|++|++++| +......+..- ..+-..+++.-      ..+.+.-..++.+++++
T Consensus         8 ~~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~-~~~kv~~l~~g-~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~   84 (446)
T 4a7p_A            8 SVRIAMIG-TGYVGLVSGACFSDFGHEVVCVDK-DARKIELLHQN-VMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKD   84 (446)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CSTTHHHHTTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTT
T ss_pred             ceEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHhcC-CCCccCCCHHHHHHhhcccCCEEEECCHHHHHhc
Confidence            35899999 999999999999999999999999 77553333221 11111111110      00111111246667889


Q ss_pred             CCEEEEeccCC
Q 019415           80 CDFVFHVATPL   90 (341)
Q Consensus        80 ~d~Vi~~a~~~   90 (341)
                      +|+||-+.+..
T Consensus        85 aDvvii~Vptp   95 (446)
T 4a7p_A           85 ADAVFIAVGTP   95 (446)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEEEcCCC
Confidence            99999987644

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.74  E-value=0.0031  Score=56.54  Aligned_cols=75  Identities=12%  Similarity=0.015  Sum_probs=54.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhh-hCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLK-SLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .+.+|||+|+ |-||..+++.+...|.+|+++++ +..+   .+.+. .+     +.. ...|..+.+.+.++..++|+|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~-~~~~---~~~~~~~l-----Ga~-~v~~~~~~~~~~~~~~~~D~v  255 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVIST-SPSK---KEEALKNF-----GAD-SFLVSRDQEQMQAAAGTLDGI  255 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CGGG---HHHHHHTS-----CCS-EEEETTCHHHHHHTTTCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHhc-----CCc-eEEeccCHHHHHHhhCCCCEE
Confidence            4579999996 99999999999999999999988 6543   22222 22     111 123555666677666789999


Q ss_pred             EEeccCC
Q 019415           84 FHVATPL   90 (341)
Q Consensus        84 i~~a~~~   90 (341)
                      |++++..
T Consensus       256 id~~g~~  262 (366)
T 1yqd_A          256 IDTVSAV  262 (366)
T ss_dssp             EECCSSC
T ss_pred             EECCCcH
Confidence            9998753

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.74  E-value=0.003  Score=54.14  Aligned_cols=69  Identities=9%  Similarity=0.120  Sum_probs=49.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++++|+|+|+ |-+|+.++..|.+.|. +|+++.| +.++   .+.+..      .+...     ..+++.+.+.++|+|
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R-~~~~---a~~la~------~~~~~-----~~~~~~~~~~~aDiV  179 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANR-TMSR---FNNWSL------NINKI-----NLSHAESHLDEFDII  179 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECS-CGGG---GTTCCS------CCEEE-----CHHHHHHTGGGCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeC-CHHH---HHHHHH------hcccc-----cHhhHHHHhcCCCEE
Confidence            3578999995 8899999999999998 8999999 6543   111111      22221     245567778899999


Q ss_pred             EEeccC
Q 019415           84 FHVATP   89 (341)
Q Consensus        84 i~~a~~   89 (341)
                      |++...
T Consensus       180 InaTp~  185 (277)
T 3don_A          180 INTTPA  185 (277)
T ss_dssp             EECCC-
T ss_pred             EECccC
Confidence            999654

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.73  E-value=0.002  Score=56.44  Aligned_cols=70  Identities=17%  Similarity=0.158  Sum_probs=47.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++|+|.|+| .|.+|..+++.|++.|+ +|++.+| +. ...+.+.+...     ++..       ..+..++++++|+|
T Consensus        23 ~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr-~~-~~~~~~~~~~~-----g~~~-------~~~~~e~~~~aDvV   87 (312)
T 3qsg_A           23 NAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDA-AS-AESWRPRAEEL-----GVSC-------KASVAEVAGECDVI   87 (312)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECS-SC-HHHHHHHHHHT-----TCEE-------CSCHHHHHHHCSEE
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcC-CC-CHHHHHHHHHC-----CCEE-------eCCHHHHHhcCCEE
Confidence            457999999 79999999999999999 9999988 63 11233333331     2222       12345566788999


Q ss_pred             EEeccC
Q 019415           84 FHVATP   89 (341)
Q Consensus        84 i~~a~~   89 (341)
                      |-+...
T Consensus        88 i~~vp~   93 (312)
T 3qsg_A           88 FSLVTA   93 (312)
T ss_dssp             EECSCT
T ss_pred             EEecCc
Confidence            988654

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.72  E-value=0.0024  Score=59.40  Aligned_cols=80  Identities=23%  Similarity=0.203  Sum_probs=50.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceE-EE-----ecCCCChHHHHHHh
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLI-FF-----EAEIYDPDTFENAI   77 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~-~~-----~~Dl~~~~~~~~~~   77 (341)
                      .|||.|+| +|++|..++..|++.|++|++++| +..   +.+.+...  +-..+++. .+     .+.+.-..++.+++
T Consensus         8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~-~~~---~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~   82 (478)
T 2y0c_A            8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDV-DQA---KIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAV   82 (478)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHH---HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHH
T ss_pred             CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEEC-CHH---HHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHh
Confidence            58999998 999999999999999999999988 653   34444331  11111110 00     00011111244566


Q ss_pred             cCCCEEEEeccCC
Q 019415           78 QGCDFVFHVATPL   90 (341)
Q Consensus        78 ~~~d~Vi~~a~~~   90 (341)
                      +++|+||-+....
T Consensus        83 ~~aDvviiaVptp   95 (478)
T 2y0c_A           83 AHGDVQFIAVGTP   95 (478)
T ss_dssp             HHCSEEEECCCCC
T ss_pred             hcCCEEEEEeCCC
Confidence            7889999887653

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=96.70  E-value=0.007  Score=46.00  Aligned_cols=34  Identities=26%  Similarity=0.387  Sum_probs=29.3

Q ss_pred             CCcEEEEecCc---chHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGE---GFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      +.++|.|+|+|   |.+|..+++.|.+.||+|+.+.+
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp   49 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNP   49 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCC
Confidence            45789999987   99999999999999999777655

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.69  E-value=0.0051  Score=53.48  Aligned_cols=70  Identities=17%  Similarity=0.279  Sum_probs=51.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+| .|-+|+.+++.|...|.+|++.+| +..+   ...+...     ++..+.     ..++.++++++|+||
T Consensus       156 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~-~~~~---~~~~~~~-----g~~~~~-----~~~l~~~l~~aDvVi  220 (300)
T 2rir_A          156 HGSQVAVLG-LGRTGMTIARTFAALGANVKVGAR-SSAH---LARITEM-----GLVPFH-----TDELKEHVKDIDICI  220 (300)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-SHHH---HHHHHHT-----TCEEEE-----GGGHHHHSTTCSEEE
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHC-----CCeEEc-----hhhHHHHhhCCCEEE
Confidence            468999999 599999999999999999999988 6532   2222221     223221     245778889999999


Q ss_pred             EeccC
Q 019415           85 HVATP   89 (341)
Q Consensus        85 ~~a~~   89 (341)
                      .+...
T Consensus       221 ~~~p~  225 (300)
T 2rir_A          221 NTIPS  225 (300)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            99775

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.69  E-value=0.002  Score=56.26  Aligned_cols=67  Identities=21%  Similarity=0.229  Sum_probs=48.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|+|.|+| .|.+|..+++.|++.|++|++.+| +...   .+.+...     ++..       ..++.++++++|+||
T Consensus         8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr-~~~~---~~~~~~~-----g~~~-------~~~~~e~~~~aDvVi   70 (306)
T 3l6d_A            8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNR-SPGK---AAALVAA-----GAHL-------CESVKAALSASPATI   70 (306)
T ss_dssp             CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SHHH---HHHHHHH-----TCEE-------CSSHHHHHHHSSEEE
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHC-----CCee-------cCCHHHHHhcCCEEE
Confidence            357899998 899999999999999999999988 6543   3333221     2211       123556677889999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      -+..
T Consensus        71 ~~vp   74 (306)
T 3l6d_A           71 FVLL   74 (306)
T ss_dssp             ECCS
T ss_pred             EEeC
Confidence            8854

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.69  E-value=0.0026  Score=57.07  Aligned_cols=74  Identities=15%  Similarity=0.229  Sum_probs=49.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC--hHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD--PDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~d~V   83 (341)
                      +.+|||+|| |-||..+++.+...|.+|++++| +.....+.+.+..+     +...+  | .+  .+.+.+.-.++|+|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~-~~~~~~~~~~~~~~-----ga~~v--~-~~~~~~~~~~~~~~~d~v  250 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANR-REPTEVEQTVIEET-----KTNYY--N-SSNGYDKLKDSVGKFDVI  250 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEES-SCCCHHHHHHHHHH-----TCEEE--E-CTTCSHHHHHHHCCEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeC-CccchHHHHHHHHh-----CCcee--c-hHHHHHHHHHhCCCCCEE
Confidence            679999999 99999999999999999999998 65211222333332     22333  4 33  22333322579999


Q ss_pred             EEeccC
Q 019415           84 FHVATP   89 (341)
Q Consensus        84 i~~a~~   89 (341)
                      |++++.
T Consensus       251 id~~g~  256 (366)
T 2cdc_A          251 IDATGA  256 (366)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.65  E-value=0.0098  Score=51.85  Aligned_cols=113  Identities=15%  Similarity=0.131  Sum_probs=73.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhh-hhHhhhC-CCCCCceEEEe-cCCCChHHHHHHhcCCCEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSK-VDLLKSL-PGAETRLIFFE-AEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~-~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ||.|+|| |.+|..++..|+..|. +|..+++ +...... ...+... ........+.. .|      . +.++++|+|
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d------~-~a~~~aD~V   71 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIAR-TPGKPQGEALDLAHAAAELGVDIRISGSNS------Y-EDMRGSDIV   71 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECS-STTHHHHHHHHHHHHHHHHTCCCCEEEESC------G-GGGTTCSEE
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcC-ChhhHHHHHHHHHHhhhhcCCCeEEEECCC------H-HHhCCCCEE
Confidence            5899998 9999999999998887 6999888 6543221 1111110 00011222332 23      2 367899999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |-.++...... .........|+.-...+++.+.+...-.++|.+|-
T Consensus        72 i~~ag~~~k~G-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           72 LVTAGIGRKPG-MTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             EECCSCCCCSS-CCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EEeCCCCCCCC-CcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            99998755332 22346788899999999999888752346666654

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.63  E-value=0.0095  Score=53.26  Aligned_cols=96  Identities=16%  Similarity=0.122  Sum_probs=56.2

Q ss_pred             CCcEEEEecCcchHHHHHHH-HHHHCC---CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIK-KLLDKG---YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~-~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      .+++|.|+||||++|+.|++ .|.++.   .++..++- + +...+...   +.+  ...  ..-++.+++.    ++++
T Consensus         3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss-~-~aG~~~~~---~~~--~~~--~v~~~~~~~~----~~~v   69 (377)
T 3uw3_A            3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFST-S-NAGGKAPS---FAK--NET--TLKDATSIDD----LKKC   69 (377)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEES-S-CTTSBCCT---TCC--SCC--BCEETTCHHH----HHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEec-h-hcCCCHHH---cCC--Cce--EEEeCCChhH----hcCC
Confidence            45899999999999999999 777766   35555544 3 21111111   111  111  1123334333    4689


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCc-CEEEEeccc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTV-KRLIYTASV  131 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~I~~Ss~  131 (341)
                      |+||.|.+...                 +..++..+.+.| + +++|=.|+.
T Consensus        70 Dvvf~a~~~~~-----------------s~~~~~~~~~~G-~k~~VID~ss~  103 (377)
T 3uw3_A           70 DVIITCQGGDY-----------------TNDVFPKLRAAG-WNGYWIDAASS  103 (377)
T ss_dssp             SEEEECSCHHH-----------------HHHHHHHHHHTT-CCSEEEECSST
T ss_pred             CEEEECCChHH-----------------HHHHHHHHHHCC-CCEEEEeCCcc
Confidence            99999866322                 234555566677 5 367777765

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.63  E-value=0.0024  Score=55.50  Aligned_cols=66  Identities=23%  Similarity=0.298  Sum_probs=47.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      |+||-++| .|.+|..+++.|++.||+|++.+| +.+   +.+.+...     +...       .++..++.+++|+||-
T Consensus         3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr-~~~---~~~~l~~~-----Ga~~-------a~s~~e~~~~~dvv~~   65 (300)
T 3obb_A            3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDL-VQS---AVDGLVAA-----GASA-------ARSARDAVQGADVVIS   65 (300)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-SHH---HHHHHHHT-----TCEE-------CSSHHHHHTTCSEEEE
T ss_pred             cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcC-CHH---HHHHHHHc-----CCEE-------cCCHHHHHhcCCceee
Confidence            56899999 999999999999999999999998 653   34444332     1111       1235566677787777


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      |..
T Consensus        66 ~l~   68 (300)
T 3obb_A           66 MLP   68 (300)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            743

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.63  E-value=0.0037  Score=55.38  Aligned_cols=74  Identities=16%  Similarity=0.094  Sum_probs=50.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh---HHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP---DTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~d   81 (341)
                      .+.+|||+|| |-+|..+++.+...|.+|++++| +..+   .+.+..+     +... ..|..+.   +.+.+...++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~-~~~~---~~~~~~l-----Ga~~-~~d~~~~~~~~~~~~~~~~~d  232 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI-GDEK---LELAKEL-----GADL-VVNPLKEDAAKFMKEKVGGVH  232 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECS-CHHH---HHHHHHT-----TCSE-EECTTTSCHHHHHHHHHSSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHC-----CCCE-EecCCCccHHHHHHHHhCCCC
Confidence            4579999999 66999999999999999999988 6543   3333333     1111 2355443   23333335799


Q ss_pred             EEEEeccC
Q 019415           82 FVFHVATP   89 (341)
Q Consensus        82 ~Vi~~a~~   89 (341)
                      +||++++.
T Consensus       233 ~vid~~g~  240 (339)
T 1rjw_A          233 AAVVTAVS  240 (339)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999873

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.63  E-value=0.0081  Score=54.17  Aligned_cols=75  Identities=20%  Similarity=0.161  Sum_probs=51.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC----------------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY----------------   68 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (341)
                      .+++|+|+| .|-+|..+++.+...|.+|++++| +..+......+        +..++..|..                
T Consensus       171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~-~~~~~~~~~~~--------Ga~~~~i~~~~~~~~~~~~~~~~~~s  240 (384)
T 1l7d_A          171 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDV-RAATKEQVESL--------GGKFITVDDEAMKTAETAGGYAKEMG  240 (384)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CSTTHHHHHHT--------TCEECCC-------------------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHc--------CCeEEeecccccccccccccchhhcC
Confidence            357999999 599999999999999999999988 76543333222        1122211110                


Q ss_pred             ------ChHHHHHHhcCCCEEEEeccC
Q 019415           69 ------DPDTFENAIQGCDFVFHVATP   89 (341)
Q Consensus        69 ------~~~~~~~~~~~~d~Vi~~a~~   89 (341)
                            ..+.+.+.+.++|+||+++..
T Consensus       241 ~~~~~~~~~~l~~~~~~aDvVi~~~~~  267 (384)
T 1l7d_A          241 EEFRKKQAEAVLKELVKTDIAITTALI  267 (384)
T ss_dssp             ----CCHHHHHHHHHTTCSEEEECCCC
T ss_pred             HHHHhhhHHHHHHHhCCCCEEEECCcc
Confidence                  133477788899999998843

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.62  E-value=0.007  Score=51.58  Aligned_cols=57  Identities=18%  Similarity=0.159  Sum_probs=47.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++++|+|+++.+|+.++..|+..|.+|++..| +.                             .++.+.++.+|+||
T Consensus       160 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs-~t-----------------------------~~L~~~~~~ADIVI  209 (285)
T 3l07_A          160 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHR-FT-----------------------------TDLKSHTTKADILI  209 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT-TC-----------------------------SSHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC-Cc-----------------------------hhHHHhcccCCEEE
Confidence            5689999999999999999999999999998766 21                             13667888999999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      ...+...
T Consensus       210 ~Avg~p~  216 (285)
T 3l07_A          210 VAVGKPN  216 (285)
T ss_dssp             ECCCCTT
T ss_pred             ECCCCCC
Confidence            9987543

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.62  E-value=0.017  Score=51.57  Aligned_cols=95  Identities=16%  Similarity=0.097  Sum_probs=54.8

Q ss_pred             CcEEEEecCcchHHHHHHH-HHHHCCC---eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIK-KLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      |+||.|.||+|++|+.|++ .|.+.++   +++.+.. +... .....+   .    +......|..+++.    ++++|
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~-~s~G-~~v~~~---~----g~~i~~~~~~~~~~----~~~~D   67 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFST-SQLG-QAAPSF---G----GTTGTLQDAFDLEA----LKALD   67 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEES-SSTT-SBCCGG---G----TCCCBCEETTCHHH----HHTCS
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEe-CCCC-CCcccc---C----CCceEEEecCChHH----hcCCC
Confidence            3689999999999999999 4555543   4555544 3211 111101   0    11222233444444    35899


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcC-EEEEeccc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK-RLIYTASV  131 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~I~~Ss~  131 (341)
                      +||.|.+..                 .+...+..+.+.| ++ .+|=.||.
T Consensus        68 vVf~a~g~~-----------------~s~~~a~~~~~~G-~k~vVID~ss~  100 (367)
T 1t4b_A           68 IIVTCQGGD-----------------YTNEIYPKLRESG-WQGYWIDAASS  100 (367)
T ss_dssp             EEEECSCHH-----------------HHHHHHHHHHHTT-CCCEEEECSST
T ss_pred             EEEECCCch-----------------hHHHHHHHHHHCC-CCEEEEcCChh
Confidence            999997631                 1345666667777 54 45555554

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=96.61  E-value=0.0049  Score=54.89  Aligned_cols=76  Identities=17%  Similarity=0.084  Sum_probs=49.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEe------cCCC-ChHHHHHHhc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFE------AEIY-DPDTFENAIQ   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~Dl~-~~~~~~~~~~   78 (341)
                      +|||+|+| .|.+|..++..|.+.|++|++++| +...   .+.+....    ++.+..      ..+. ...++.++++
T Consensus         4 ~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r-~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (359)
T 1bg6_A            4 SKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDI-DAQR---IKEIQDRG----AIIAEGPGLAGTAHPDLLTSDIGLAVK   74 (359)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHH---HHHHHHHT----SEEEESSSCCEEECCSEEESCHHHHHT
T ss_pred             cCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeC-CHHH---HHHHHhcC----CeEEeccccccccccceecCCHHHHHh
Confidence            37999999 599999999999999999999988 6543   22222210    111100      1110 1223556677


Q ss_pred             CCCEEEEeccCC
Q 019415           79 GCDFVFHVATPL   90 (341)
Q Consensus        79 ~~d~Vi~~a~~~   90 (341)
                      ++|+||-+....
T Consensus        75 ~~D~vi~~v~~~   86 (359)
T 1bg6_A           75 DADVILIVVPAI   86 (359)
T ss_dssp             TCSEEEECSCGG
T ss_pred             cCCEEEEeCCch
Confidence            899999887643

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.60  E-value=0.0065  Score=52.60  Aligned_cols=70  Identities=17%  Similarity=0.209  Sum_probs=51.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+| .|-||+.+++.|...|.+|++.+| +..+   .+.+...     ++..+     +.+++.++++++|+|+
T Consensus       154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr-~~~~---~~~~~~~-----g~~~~-----~~~~l~~~l~~aDvVi  218 (293)
T 3d4o_A          154 HGANVAVLG-LGRVGMSVARKFAALGAKVKVGAR-ESDL---LARIAEM-----GMEPF-----HISKAAQELRDVDVCI  218 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-SHHH---HHHHHHT-----TSEEE-----EGGGHHHHTTTCSEEE
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEEC-CHHH---HHHHHHC-----CCeec-----ChhhHHHHhcCCCEEE
Confidence            468999999 799999999999999999999988 6532   2222221     23332     2345778889999999


Q ss_pred             EeccC
Q 019415           85 HVATP   89 (341)
Q Consensus        85 ~~a~~   89 (341)
                      .+...
T Consensus       219 ~~~p~  223 (293)
T 3d4o_A          219 NTIPA  223 (293)
T ss_dssp             ECCSS
T ss_pred             ECCCh
Confidence            98753

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.60  E-value=0.0057  Score=51.82  Aligned_cols=57  Identities=16%  Similarity=0.159  Sum_probs=47.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++++|+|+++.+|+.++..|++.|.+|+++.| +.                             .++.+.++.+|+||
T Consensus       149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~-~t-----------------------------~~L~~~~~~ADIVI  198 (276)
T 3ngx_A          149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHS-KT-----------------------------KDIGSMTRSSKIVV  198 (276)
T ss_dssp             CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT-TC-----------------------------SCHHHHHHHSSEEE
T ss_pred             CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeC-Cc-----------------------------ccHHHhhccCCEEE
Confidence            4689999999999999999999999999999866 21                             23667778889999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      ...+...
T Consensus       199 ~Avg~p~  205 (276)
T 3ngx_A          199 VAVGRPG  205 (276)
T ss_dssp             ECSSCTT
T ss_pred             ECCCCCc
Confidence            9987543

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.59  E-value=0.0039  Score=55.33  Aligned_cols=73  Identities=23%  Similarity=0.314  Sum_probs=49.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHhc--CCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAIQ--GCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d   81 (341)
                      .+.+|||+||+|-||...++.+...|.+|+++ + +..+   .+.++.+     +...+. +-.+ .+.+.+...  ++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~-~~~~---~~~~~~l-----Ga~~i~-~~~~~~~~~~~~~~~~g~D  218 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-A-RGSD---LEYVRDL-----GATPID-ASREPEDYAAEHTAGQGFD  218 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-E-CHHH---HHHHHHH-----TSEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-e-CHHH---HHHHHHc-----CCCEec-cCCCHHHHHHHHhcCCCce
Confidence            45799999999999999999999999999998 6 5433   3334333     222222 2222 233333333  689


Q ss_pred             EEEEecc
Q 019415           82 FVFHVAT   88 (341)
Q Consensus        82 ~Vi~~a~   88 (341)
                      +||++++
T Consensus       219 ~vid~~g  225 (343)
T 3gaz_A          219 LVYDTLG  225 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=96.59  E-value=0.016  Score=51.62  Aligned_cols=94  Identities=16%  Similarity=0.162  Sum_probs=54.3

Q ss_pred             cEEEEecCcchHHHHHHH-HHHHCCC---eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIK-KLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+||||++|+.|++ .|.++.+   ++..++- +... .+...   +.+  ....+  -+..+++    .++++|+
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss-~~aG-~~~~~---~~~--~~~~~--~~~~~~~----~~~~~Dv   67 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST-SQIG-VPAPN---FGK--DAGML--HDAFDIE----SLKQLDA   67 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES-SSTT-SBCCC---SSS--CCCBC--EETTCHH----HHTTCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEec-cccC-cCHHH---hCC--CceEE--EecCChh----HhccCCE
Confidence            689999999999999999 7777663   5555433 2221 11111   111  11111  2333333    2478999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCc-CEEEEeccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTV-KRLIYTASV  131 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~I~~Ss~  131 (341)
                      ||.|.+...                 +...+..+.+.| + +++|=.|+.
T Consensus        68 vf~a~~~~~-----------------s~~~~~~~~~~G-~k~~VID~ss~   99 (370)
T 3pzr_A           68 VITCQGGSY-----------------TEKVYPALRQAG-WKGYWIDAAST   99 (370)
T ss_dssp             EEECSCHHH-----------------HHHHHHHHHHTT-CCCEEEECSST
T ss_pred             EEECCChHH-----------------HHHHHHHHHHCC-CCEEEEeCCch
Confidence            999866322                 234555556667 5 367767764

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=96.59  E-value=0.0024  Score=56.36  Aligned_cols=91  Identities=16%  Similarity=0.174  Sum_probs=53.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEe----cCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTL----RPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~----r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|.||+|++|+.|++.|.++++++..+.    + +...    +.+. +.  ...+.+...|   ++.    + ++|+
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~-~~~g----~~l~-~~--g~~i~v~~~~---~~~----~-~~Dv   64 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASP-RSAG----VRLA-FR--GEEIPVEPLP---EGP----L-PVDL   64 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECG-GGSS----CEEE-ET--TEEEEEEECC---SSC----C-CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeecc-ccCC----CEEE-Ec--CceEEEEeCC---hhh----c-CCCE
Confidence            5799999999999999999998776543221    1 1110    0010 00  0123333333   222    3 8999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ||.|.+...                 +...+..+.+.|  .++|-.|+..
T Consensus        65 V~~a~g~~~-----------------s~~~a~~~~~~G--~~vId~s~~~   95 (331)
T 2yv3_A           65 VLASAGGGI-----------------SRAKALVWAEGG--ALVVDNSSAW   95 (331)
T ss_dssp             EEECSHHHH-----------------HHHHHHHHHHTT--CEEEECSSSS
T ss_pred             EEECCCccc-----------------hHHHHHHHHHCC--CEEEECCCcc
Confidence            999966322                 234455556667  4788888874

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.59  E-value=0.0021  Score=55.81  Aligned_cols=66  Identities=24%  Similarity=0.331  Sum_probs=46.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|.|+| .|.+|..++..|.+.|++|++.+| +...   .+.+...     ++..    .   .++.++++++|+||-
T Consensus         5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~-~~~~---~~~~~~~-----g~~~----~---~~~~~~~~~~D~vi~   67 (299)
T 1vpd_A            5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDR-NPEA---IADVIAA-----GAET----A---STAKAIAEQCDVIIT   67 (299)
T ss_dssp             -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHHH---HHHHHHT-----TCEE----C---SSHHHHHHHCSEEEE
T ss_pred             cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeC-CHHH---HHHHHHC-----CCee----c---CCHHHHHhCCCEEEE
Confidence            37999999 799999999999999999999888 6533   3333321     2221    1   124455667899998


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        68 ~v~   70 (299)
T 1vpd_A           68 MLP   70 (299)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            864

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.58  E-value=0.0014  Score=56.65  Aligned_cols=36  Identities=25%  Similarity=0.251  Sum_probs=32.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      .++|.|+| .|.+|+.++..|++.|++|++.+| +...
T Consensus         4 ~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~-~~~~   39 (283)
T 4e12_A            4 ITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDI-NTDA   39 (283)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeC-CHHH
Confidence            47899998 699999999999999999999988 7644

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.58  E-value=0.0058  Score=52.47  Aligned_cols=57  Identities=16%  Similarity=0.176  Sum_probs=47.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHH--HHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFE--NAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~--~~~~~~d~   82 (341)
                      .+++++|+|++|.+|+.++..|++.|.+|+++.| +..                             ++.  +.++.+|+
T Consensus       164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~-~T~-----------------------------~l~l~~~~~~ADI  213 (300)
T 4a26_A          164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHS-GTS-----------------------------TEDMIDYLRTADI  213 (300)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT-TSC-----------------------------HHHHHHHHHTCSE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeC-CCC-----------------------------CchhhhhhccCCE
Confidence            5789999999999999999999999999999866 221                             244  77889999


Q ss_pred             EEEeccCCc
Q 019415           83 VFHVATPLQ   91 (341)
Q Consensus        83 Vi~~a~~~~   91 (341)
                      ||...+...
T Consensus       214 VI~Avg~p~  222 (300)
T 4a26_A          214 VIAAMGQPG  222 (300)
T ss_dssp             EEECSCCTT
T ss_pred             EEECCCCCC
Confidence            999988643

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.58  E-value=0.0072  Score=51.48  Aligned_cols=57  Identities=23%  Similarity=0.251  Sum_probs=47.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++++|+|++|.+|+.++..|+..|..|+++.+ +.                             .++.+.++.+|+||
T Consensus       160 ~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs-~T-----------------------------~~L~~~~~~ADIVI  209 (286)
T 4a5o_A          160 YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHR-FT-----------------------------RDLADHVSRADLVV  209 (286)
T ss_dssp             TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECT-TC-----------------------------SCHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC-CC-----------------------------cCHHHHhccCCEEE
Confidence            5789999999999999999999999999999755 21                             13667788899999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      ...+...
T Consensus       210 ~Avg~p~  216 (286)
T 4a5o_A          210 VAAGKPG  216 (286)
T ss_dssp             ECCCCTT
T ss_pred             ECCCCCC
Confidence            9987543

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.58  E-value=0.0031  Score=53.12  Aligned_cols=36  Identities=31%  Similarity=0.388  Sum_probs=32.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      .+|+|.|+| .|.+|+.+++.|++.|++|++.+| +..
T Consensus        18 ~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r-~~~   53 (245)
T 3dtt_A           18 QGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTR-DPK   53 (245)
T ss_dssp             -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-Chh
Confidence            458999998 999999999999999999999999 654

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=96.56  E-value=0.01  Score=52.48  Aligned_cols=74  Identities=19%  Similarity=0.196  Sum_probs=47.9

Q ss_pred             CCCC-CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHhc
Q 019415            1 MDHK-SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAIQ   78 (341)
Q Consensus         1 M~~~-~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~   78 (341)
                      |+.+ ..++|.|+| .|.||..+++.|.+.|++|++.+| +...   .+.....     ++..    ..+. +.+..+.+
T Consensus         2 m~~~~~~~kIgIIG-~G~mG~slA~~L~~~G~~V~~~dr-~~~~---~~~a~~~-----G~~~----~~~~~e~~~~a~~   67 (341)
T 3ktd_A            2 MTTKDISRPVCILG-LGLIGGSLLRDLHAANHSVFGYNR-SRSG---AKSAVDE-----GFDV----SADLEATLQRAAA   67 (341)
T ss_dssp             ----CCSSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-CHHH---HHHHHHT-----TCCE----ESCHHHHHHHHHH
T ss_pred             CCccCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEEeC-CHHH---HHHHHHc-----CCee----eCCHHHHHHhccc
Confidence            5543 357899998 899999999999999999999988 6543   2223222     2211    1232 23444455


Q ss_pred             CCCEEEEecc
Q 019415           79 GCDFVFHVAT   88 (341)
Q Consensus        79 ~~d~Vi~~a~   88 (341)
                      ++|+||-+..
T Consensus        68 ~aDlVilavP   77 (341)
T 3ktd_A           68 EDALIVLAVP   77 (341)
T ss_dssp             TTCEEEECSC
T ss_pred             CCCEEEEeCC
Confidence            7899988865

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.54  E-value=0.0033  Score=53.32  Aligned_cols=67  Identities=19%  Similarity=0.191  Sum_probs=47.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|.|+| .|.+|+.+++.|.+.|++|.+.+| +...   .+.+....    ++..       ..++.++++++|+||-
T Consensus         3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~-~~~~---~~~~~~~~----g~~~-------~~~~~~~~~~~D~Vi~   66 (259)
T 2ahr_A            3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGS-SLER---SKEIAEQL----ALPY-------AMSHQDLIDQVDLVIL   66 (259)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECS-SHHH---HHHHHHHH----TCCB-------CSSHHHHHHTCSEEEE
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECC-CHHH---HHHHHHHc----CCEe-------eCCHHHHHhcCCEEEE
Confidence            57999999 899999999999999999999888 6533   22222110    1111       1224556678999998


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        67 ~v~   69 (259)
T 2ahr_A           67 GIK   69 (259)
T ss_dssp             CSC
T ss_pred             EeC
Confidence            865

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.54  E-value=0.0033  Score=56.12  Aligned_cols=70  Identities=14%  Similarity=0.185  Sum_probs=46.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|.|+| .|.+|..+++.|++.|++|++.+| +..   +.+.+...     ++.    -..+.+++.+..+.+|+||-
T Consensus        22 ~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr-~~~---~~~~l~~~-----g~~----~~~s~~e~~~~a~~~DvVi~   87 (358)
T 4e21_A           22 SMQIGMIG-LGRMGADMVRRLRKGGHECVVYDL-NVN---AVQALERE-----GIA----GARSIEEFCAKLVKPRVVWL   87 (358)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHH---HHHHHHTT-----TCB----CCSSHHHHHHHSCSSCEEEE
T ss_pred             CCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeC-CHH---HHHHHHHC-----CCE----EeCCHHHHHhcCCCCCEEEE
Confidence            47999999 899999999999999999999988 653   33333321     221    11233333333334499988


Q ss_pred             eccC
Q 019415           86 VATP   89 (341)
Q Consensus        86 ~a~~   89 (341)
                      +...
T Consensus        88 ~vp~   91 (358)
T 4e21_A           88 MVPA   91 (358)
T ss_dssp             CSCG
T ss_pred             eCCH
Confidence            8653

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.53  E-value=0.021  Score=52.62  Aligned_cols=77  Identities=16%  Similarity=-0.003  Sum_probs=54.8

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-CC
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-CD   81 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d   81 (341)
                      .++++|+|+|. |-.|..+++.|.++|++|++.++ +... ....+.++..     ++.+..+.-.+     +.+.+ +|
T Consensus         7 ~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~-~~~~~~~~~~~L~~~-----gi~~~~g~~~~-----~~~~~~~d   74 (451)
T 3lk7_A            7 FENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDG-KPFDENPTAQSLLEE-----GIKVVCGSHPL-----ELLDEDFC   74 (451)
T ss_dssp             TTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEES-SCGGGCHHHHHHHHT-----TCEEEESCCCG-----GGGGSCEE
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeC-CcccCChHHHHHHhC-----CCEEEECCChH-----HhhcCCCC
Confidence            35689999997 88999999999999999999988 6532 2333444442     67777665321     23455 89


Q ss_pred             EEEEeccCCcc
Q 019415           82 FVFHVATPLQH   92 (341)
Q Consensus        82 ~Vi~~a~~~~~   92 (341)
                      .||...|....
T Consensus        75 ~vv~spgi~~~   85 (451)
T 3lk7_A           75 YMIKNPGIPYN   85 (451)
T ss_dssp             EEEECTTSCTT
T ss_pred             EEEECCcCCCC
Confidence            99998887543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.53  E-value=0.0043  Score=50.86  Aligned_cols=33  Identities=15%  Similarity=0.144  Sum_probs=29.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ++|+|.|+| .|.+|+.++..|.+.|++|++.+|
T Consensus        18 ~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~   50 (209)
T 2raf_A           18 QGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGS   50 (209)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcC
Confidence            458999999 899999999999999999999888

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.51  E-value=0.0028  Score=54.31  Aligned_cols=75  Identities=15%  Similarity=0.143  Sum_probs=47.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|+|+|+ |-+|+.++..|++.|.+|++..| +.++...+..  .+... ..+..  .|+   +++.+  .++|+||
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R-~~~~a~~l~~--~~~~~-~~~~~--~~~---~~~~~--~~~DivI  185 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANR-TFSKTKELAE--RFQPY-GNIQA--VSM---DSIPL--QTYDLVI  185 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEES-SHHHHHHHHH--HHGGG-SCEEE--EEG---GGCCC--SCCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--Hcccc-CCeEE--eeH---HHhcc--CCCCEEE
Confidence            4679999997 77999999999999999999999 7543222211  11110 02222  222   11110  3789999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      ++++...
T Consensus       186 n~t~~~~  192 (272)
T 1p77_A          186 NATSAGL  192 (272)
T ss_dssp             ECCCC--
T ss_pred             ECCCCCC
Confidence            9988654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.50  E-value=0.0035  Score=55.74  Aligned_cols=97  Identities=16%  Similarity=0.121  Sum_probs=60.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHhc--
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAIQ--   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--   78 (341)
                      .+.+|||+|| |-+|..+++.+...|. +|++++| +..+   .+.+..+     +... ..|..+.+   .+.++..  
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~-~~~~---~~~~~~~-----Ga~~-~~~~~~~~~~~~v~~~~~g~  235 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEP-SDFR---RELAKKV-----GADY-VINPFEEDVVKEVMDITDGN  235 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECS-CHHH---HHHHHHH-----TCSE-EECTTTSCHHHHHHHHTTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECC-CHHH---HHHHHHh-----CCCE-EECCCCcCHHHHHHHHcCCC
Confidence            3568999999 9999999999999998 9999988 6533   3333332     1111 12443332   3333332  


Q ss_pred             CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           79 GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ++|+||++++...                .....++.++..   .+++.+++.
T Consensus       236 g~D~vid~~g~~~----------------~~~~~~~~l~~~---G~iv~~g~~  269 (348)
T 2d8a_A          236 GVDVFLEFSGAPK----------------ALEQGLQAVTPA---GRVSLLGLY  269 (348)
T ss_dssp             CEEEEEECSCCHH----------------HHHHHHHHEEEE---EEEEECCCC
T ss_pred             CCCEEEECCCCHH----------------HHHHHHHHHhcC---CEEEEEccC
Confidence            5899999987311                123344555444   478887764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.49  E-value=0.014  Score=53.99  Aligned_cols=99  Identities=22%  Similarity=0.356  Sum_probs=68.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi   84 (341)
                      .++|+|.| .|.+|.++++.|. .+++|.++.+ +..++..+.  +.+    ++..++.||-+|++.+.+. ++++|++|
T Consensus       235 ~~~v~I~G-gG~ig~~lA~~L~-~~~~v~iIE~-d~~r~~~la--~~l----~~~~Vi~GD~td~~~L~ee~i~~~D~~i  305 (461)
T 4g65_A          235 YRRIMIVG-GGNIGASLAKRLE-QTYSVKLIER-NLQRAEKLS--EEL----ENTIVFCGDAADQELLTEENIDQVDVFI  305 (461)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHT-TTSEEEEEES-CHHHHHHHH--HHC----TTSEEEESCTTCHHHHHHTTGGGCSEEE
T ss_pred             ccEEEEEc-chHHHHHHHHHhh-hcCceEEEec-CHHHHHHHH--HHC----CCceEEeccccchhhHhhcCchhhcEEE
Confidence            46899988 8999999999985 4699999877 654433222  223    3678999999999877765 67899998


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      -+-+.        .    +.|+..    .-.|++.| ++++|-.-.
T Consensus       306 a~T~~--------D----e~Ni~~----~llAk~~g-v~kvIa~vn  334 (461)
T 4g65_A          306 ALTNE--------D----ETNIMS----AMLAKRMG-AKKVMVLIQ  334 (461)
T ss_dssp             ECCSC--------H----HHHHHH----HHHHHHTT-CSEEEEECS
T ss_pred             EcccC--------c----HHHHHH----HHHHHHcC-Ccccccccc
Confidence            77331        1    223333    33467888 888775444

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.49  E-value=0.0019  Score=59.93  Aligned_cols=35  Identities=23%  Similarity=0.247  Sum_probs=31.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNLE   42 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~   42 (341)
                      +|+|.|+| .|++|..++..|++.  |++|++++| +..
T Consensus         5 ~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~-~~~   41 (467)
T 2q3e_A            5 IKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDV-NES   41 (467)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECS-CHH
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEEC-CHH
Confidence            47999998 899999999999999  899999988 654

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.48  E-value=0.0062  Score=54.63  Aligned_cols=74  Identities=19%  Similarity=0.192  Sum_probs=51.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+.+|||+|+ |-+|...++.+...|.+|+++++ +..+......+..      . ++  .|..+.+.++++..++|+||
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~-~~~~~~~a~~lGa------~-~v--i~~~~~~~~~~~~~g~Dvvi  262 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT-SEAKREAAKALGA------D-EV--VNSRNADEMAAHLKSFDFIL  262 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHTC------S-EE--EETTCHHHHHTTTTCEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHcCC------c-EE--eccccHHHHHHhhcCCCEEE
Confidence            4578999997 77999999998889999999988 6654333332211      1 12  34555554544446799999


Q ss_pred             EeccC
Q 019415           85 HVATP   89 (341)
Q Consensus        85 ~~a~~   89 (341)
                      ++++.
T Consensus       263 d~~g~  267 (369)
T 1uuf_A          263 NTVAA  267 (369)
T ss_dssp             ECCSS
T ss_pred             ECCCC
Confidence            99875

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=96.48  E-value=0.0038  Score=55.15  Aligned_cols=94  Identities=19%  Similarity=0.237  Sum_probs=55.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC---eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++||.|+||||++|..|++.|.++.+   ++..+.- ..+...++.    +.+  ..+.+...|  . +    .++++|+
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s-~~~aG~~~~----~~~--~~~~~~~~~--~-~----~~~~~Dv   66 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFAS-ARSQGRKLA----FRG--QEIEVEDAE--T-A----DPSGLDI   66 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEEC-TTTSSCEEE----ETT--EEEEEEETT--T-S----CCTTCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEEC-cccCCCcee----ecC--CceEEEeCC--H-H----HhccCCE
Confidence            47899999999999999999999743   4555543 222111111    100  122222222  1 1    2468999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ||.|.+...                 +...+..+.+.|  .++|=.|+..
T Consensus        67 vf~a~~~~~-----------------s~~~a~~~~~~G--~~vID~Sa~~   97 (344)
T 3tz6_A           67 ALFSAGSAM-----------------SKVQAPRFAAAG--VTVIDNSSAW   97 (344)
T ss_dssp             EEECSCHHH-----------------HHHHHHHHHHTT--CEEEECSSTT
T ss_pred             EEECCChHH-----------------HHHHHHHHHhCC--CEEEECCCcc
Confidence            999876322                 234555566777  4788888864

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.48  E-value=0.016  Score=51.85  Aligned_cols=100  Identities=21%  Similarity=0.184  Sum_probs=57.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEE--ecCCCCchhhhhHh-hhCCC--C---CCceEEEecCCCChHHHHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTT--LRPNLEDKSKVDLL-KSLPG--A---ETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~--~r~~~~~~~~~~~~-~~~~~--~---~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      ++||.|+||||++|..|++.|.+.. .++..+  ++ +... .++... ..+..  .   ..++.+...|..  +    .
T Consensus        19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~-~saG-k~~~~~~~~~~~~~~p~~~~~~~v~~~~~~--~----~   90 (381)
T 3hsk_A           19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASS-RSAG-KKYKDAASWKQTETLPETEQDIVVQECKPE--G----N   90 (381)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECT-TTTT-SBHHHHCCCCCSSCCCHHHHTCBCEESSSC--T----T
T ss_pred             ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccc-cccC-CCHHHhcccccccccccccccceEEeCchh--h----h
Confidence            4689999999999999999988876 366544  23 3322 222111 00000  0   012222222221  0    2


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      ++++|+||.|.+...                 +..++..+.+.|  .++|=.|+..
T Consensus        91 ~~~~Dvvf~alp~~~-----------------s~~~~~~~~~~G--~~VIDlSa~f  127 (381)
T 3hsk_A           91 FLECDVVFSGLDADV-----------------AGDIEKSFVEAG--LAVVSNAKNY  127 (381)
T ss_dssp             GGGCSEEEECCCHHH-----------------HHHHHHHHHHTT--CEEEECCSTT
T ss_pred             cccCCEEEECCChhH-----------------HHHHHHHHHhCC--CEEEEcCCcc
Confidence            468999999855321                 334555666777  5688888875

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2

Probab=96.46  E-value=0.0091  Score=54.86  Aligned_cols=120  Identities=14%  Similarity=-0.022  Sum_probs=73.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-----CCeEEEEecCCC--CchhhhhHhh-hC-CCCCCceEEEecCCCChHHHHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-----GYIVHTTLRPNL--EDKSKVDLLK-SL-PGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-----g~~V~~~~r~~~--~~~~~~~~~~-~~-~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      +|||.|+||.+..|..|+..|+.+     +.+|...++ +.  ........+. .. +.......+...     .++.++
T Consensus         7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di-~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t-----~D~~ea   80 (450)
T 1s6y_A            7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDI-PEGKEKLEIVGALAKRMVEKAGVPIEIHLT-----LDRRRA   80 (450)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECC-GGGHHHHHHHHHHHHHHHHHTTCCCEEEEE-----SCHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEc-CCChHHHHHHHHHHHHHHhhcCCCcEEEEe-----CCHHHH
Confidence            579999998777799999899884     578999988 66  4322211111 11 111112233321     235678


Q ss_pred             hcCCCEEEEeccCCccccchhHh-------------------HhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYK-------------------NVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~-------------------~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      ++++|+||..++.......+-.+                   ....-|+.....+++.+++...-..+|.+|-.
T Consensus        81 l~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNP  154 (450)
T 1s6y_A           81 LDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNP  154 (450)
T ss_dssp             HTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             hCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            88999999999875533211110                   12455677788888888888634566666543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.45  E-value=0.008  Score=52.34  Aligned_cols=82  Identities=20%  Similarity=0.072  Sum_probs=54.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceE-EEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLI-FFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .+++++|+|++..+|+.+++.|+..|.+|+++.| +....  ......+.   ...+ ......++++++.+.++++|+|
T Consensus       176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR-~~~~l--~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~~ADIV  249 (320)
T 1edz_A          176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDV-NNIQK--FTRGESLK---LNKHHVEDLGEYSEDLLKKCSLDSDVV  249 (320)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECS-SEEEE--EESCCCSS---CCCCEEEEEEECCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeC-chHHH--HhHHHHHh---hhcccccccccccHhHHHHHhccCCEE
Confidence            4689999998889999999999999999999888 53210  00000110   0111 1111113347789999999999


Q ss_pred             EEeccCCcc
Q 019415           84 FHVATPLQH   92 (341)
Q Consensus        84 i~~a~~~~~   92 (341)
                      |-+.+....
T Consensus       250 IsAtg~p~~  258 (320)
T 1edz_A          250 ITGVPSENY  258 (320)
T ss_dssp             EECCCCTTC
T ss_pred             EECCCCCcc
Confidence            999886543

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.45  E-value=0.017  Score=51.49  Aligned_cols=71  Identities=15%  Similarity=0.127  Sum_probs=50.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCC-CChHHHHHHhcCCCEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI-YDPDTFENAIQGCDFVF   84 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~d~Vi   84 (341)
                      ||+|+|+| +|..|..++..+.+.|++|++++. ++..          +...---+++..|. .+.+.+....+++|.|+
T Consensus         1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~-~~~~----------~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~   68 (363)
T 4ffl_A            1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDK-NPQA----------LIRNYADEFYCFDVIKEPEKLLELSKRVDAVL   68 (363)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CTTC----------TTTTTSSEEEECCTTTCHHHHHHHHTSSSEEE
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeC-CCCC----------hhHhhCCEEEECCCCcCHHHHHHHhcCCCEEE
Confidence            57999999 689999999999999999999977 6543          11111123455555 45667777778999987


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      -..+
T Consensus        69 ~~~~   72 (363)
T 4ffl_A           69 PVNE   72 (363)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            6543

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.43  E-value=0.0031  Score=55.27  Aligned_cols=68  Identities=21%  Similarity=0.178  Sum_probs=47.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCce-EEEecCCCChHHHHH-HhcCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRL-IFFEAEIYDPDTFEN-AIQGCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~~~~-~~~~~d   81 (341)
                      .|+|.|+| .|.+|..+++.|.+.|+  +|++.+| +...   .+.....     ++ .....|      +.+ +++++|
T Consensus        33 ~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr-~~~~---~~~a~~~-----G~~~~~~~~------~~~~~~~~aD   96 (314)
T 3ggo_A           33 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDI-NPES---ISKAVDL-----GIIDEGTTS------IAKVEDFSPD   96 (314)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECS-CHHH---HHHHHHT-----TSCSEEESC------TTGGGGGCCS
T ss_pred             CCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEEC-CHHH---HHHHHHC-----CCcchhcCC------HHHHhhccCC
Confidence            47999999 89999999999999999  9999988 6543   2322221     11 011112      234 567899


Q ss_pred             EEEEeccC
Q 019415           82 FVFHVATP   89 (341)
Q Consensus        82 ~Vi~~a~~   89 (341)
                      +||-+...
T Consensus        97 vVilavp~  104 (314)
T 3ggo_A           97 FVMLSSPV  104 (314)
T ss_dssp             EEEECSCG
T ss_pred             EEEEeCCH
Confidence            99988643

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.43  E-value=0.0094  Score=54.01  Aligned_cols=75  Identities=24%  Similarity=0.242  Sum_probs=51.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC-------------Ch--
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY-------------DP--   70 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------~~--   70 (341)
                      +.+|+|+| .|-+|..+++.|...|.+|++++| +......   +..+     +..++..|..             +.  
T Consensus       172 g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~v~D~-~~~~~~~---~~~l-----Ga~~~~~~~~~~~~~~~g~~~~~~~~~  241 (401)
T 1x13_A          172 PAKVMVIG-AGVAGLAAIGAANSLGAIVRAFDT-RPEVKEQ---VQSM-----GAEFLELDFKEEAGSGDGYAKVMSDAF  241 (401)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CGGGHHH---HHHT-----TCEECCC--------CCHHHHHHSHHH
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcC-CHHHHHH---HHHc-----CCEEEEecccccccccccchhhccHHH
Confidence            57899999 599999999999999999999988 7654333   2332     2233322221             11  


Q ss_pred             -----HHHHHHhcCCCEEEEeccCC
Q 019415           71 -----DTFENAIQGCDFVFHVATPL   90 (341)
Q Consensus        71 -----~~~~~~~~~~d~Vi~~a~~~   90 (341)
                           +.+.+.+.++|+||.++...
T Consensus       242 ~~~~~~~l~e~~~~aDvVI~~~~~p  266 (401)
T 1x13_A          242 IKAEMELFAAQAKEVDIIVTTALIP  266 (401)
T ss_dssp             HHHHHHHHHHHHHHCSEEEECCCCT
T ss_pred             HHHHHHHHHHHhCCCCEEEECCccC
Confidence                 14667777899999997543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.43  E-value=0.0066  Score=55.16  Aligned_cols=72  Identities=24%  Similarity=0.285  Sum_probs=50.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .+++|+|+|+ |-+|+.+++.|...|. +|++++| +..+..  +....+     +...  .+   .+++.+.+.++|+|
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r-~~~ra~--~la~~~-----g~~~--~~---~~~l~~~l~~aDvV  231 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR-TYERAV--ELARDL-----GGEA--VR---FDELVDHLARSDVV  231 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS-SHHHHH--HHHHHH-----TCEE--CC---GGGHHHHHHTCSEE
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeC-CHHHHH--HHHHHc-----CCce--ec---HHhHHHHhcCCCEE
Confidence            5689999996 9999999999999998 8999988 653311  111121     1222  12   23567777899999


Q ss_pred             EEeccCC
Q 019415           84 FHVATPL   90 (341)
Q Consensus        84 i~~a~~~   90 (341)
                      |.+.+..
T Consensus       232 i~at~~~  238 (404)
T 1gpj_A          232 VSATAAP  238 (404)
T ss_dssp             EECCSSS
T ss_pred             EEccCCC
Confidence            9997643

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.43  E-value=0.0021  Score=55.53  Aligned_cols=79  Identities=9%  Similarity=0.095  Sum_probs=49.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++++++|+|++ -+|++++..|++.| +|++..| +..+...+. .+.....  ... .+.+|+.+   +.+.+.++|+|
T Consensus       127 ~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r-~~~~~~~l~~~~~~~~~--~~~-~~~~d~~~---~~~~~~~~Dil  197 (287)
T 1nvt_A          127 KDKNIVIYGAG-GAARAVAFELAKDN-NIIIANR-TVEKAEALAKEIAEKLN--KKF-GEEVKFSG---LDVDLDGVDII  197 (287)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECS-SHHHHHHHHHHHHHHHT--CCH-HHHEEEEC---TTCCCTTCCEE
T ss_pred             CCCEEEEECch-HHHHHHHHHHHHCC-CEEEEEC-CHHHHHHHHHHHhhhcc--ccc-ceeEEEee---HHHhhCCCCEE
Confidence            45799999975 99999999999999 9999988 654322221 1111000  000 01122222   13345679999


Q ss_pred             EEeccCCcc
Q 019415           84 FHVATPLQH   92 (341)
Q Consensus        84 i~~a~~~~~   92 (341)
                      |++++....
T Consensus       198 Vn~ag~~~~  206 (287)
T 1nvt_A          198 INATPIGMY  206 (287)
T ss_dssp             EECSCTTCT
T ss_pred             EECCCCCCC
Confidence            999987543

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.42  E-value=0.0028  Score=55.07  Aligned_cols=66  Identities=17%  Similarity=0.167  Sum_probs=46.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +|+|.|+| .|.+|+.++..|.+.|++|++.+| +...   .+.+...     ++..    .   .++.++++++|+||-
T Consensus         4 ~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~-~~~~---~~~~~~~-----g~~~----~---~~~~~~~~~~D~vi~   66 (301)
T 3cky_A            4 SIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDL-MEAN---VAAVVAQ-----GAQA----C---ENNQKVAAASDIIFT   66 (301)
T ss_dssp             CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECS-SHHH---HHHHHTT-----TCEE----C---SSHHHHHHHCSEEEE
T ss_pred             CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeC-CHHH---HHHHHHC-----CCee----c---CCHHHHHhCCCEEEE
Confidence            48999999 799999999999999999999888 6432   3333221     2221    1   124455667899998


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        67 ~vp   69 (301)
T 3cky_A           67 SLP   69 (301)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            853

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.42  E-value=0.012  Score=51.46  Aligned_cols=67  Identities=12%  Similarity=0.220  Sum_probs=51.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+|+|.|+| .|.||+.+++.|...|.+|++.+| +....             .++....    ...++.++++++|+|+
T Consensus       138 ~g~tvGIiG-~G~IG~~vA~~l~~~G~~V~~~dr-~~~~~-------------~~~~~~~----~~~~l~ell~~aDiV~  198 (315)
T 3pp8_A          138 EEFSVGIMG-AGVLGAKVAESLQAWGFPLRCWSR-SRKSW-------------PGVESYV----GREELRAFLNQTRVLI  198 (315)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHHTTTCCEEEEES-SCCCC-------------TTCEEEE----SHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEcC-Cchhh-------------hhhhhhc----ccCCHHHHHhhCCEEE
Confidence            468999999 899999999999999999999988 65420             1222221    1367888999999998


Q ss_pred             EeccCC
Q 019415           85 HVATPL   90 (341)
Q Consensus        85 ~~a~~~   90 (341)
                      .+....
T Consensus       199 l~~Plt  204 (315)
T 3pp8_A          199 NLLPNT  204 (315)
T ss_dssp             ECCCCC
T ss_pred             EecCCc
Confidence            886543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.42  E-value=0.0042  Score=55.51  Aligned_cols=74  Identities=16%  Similarity=0.096  Sum_probs=50.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~V   83 (341)
                      .+.+|||+|| |-+|...++.+...|.+|+++++ +..+......+..      . ++  .|..+. +..+.+..++|+|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~-~~~~~~~~~~lGa------~-~v--~~~~~~~~~~~~~~~~~D~v  247 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISR-SSRKREDAMKMGA------D-HY--IATLEEGDWGEKYFDTFDLI  247 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES-SSTTHHHHHHHTC------S-EE--EEGGGTSCHHHHSCSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcC-CHHHHHHHHHcCC------C-EE--EcCcCchHHHHHhhcCCCEE
Confidence            4579999999 99999999988888999999998 7655443333211      1 12  233333 2233333579999


Q ss_pred             EEeccC
Q 019415           84 FHVATP   89 (341)
Q Consensus        84 i~~a~~   89 (341)
                      |.+++.
T Consensus       248 id~~g~  253 (360)
T 1piw_A          248 VVCASS  253 (360)
T ss_dssp             EECCSC
T ss_pred             EECCCC
Confidence            999885

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.41  E-value=0.007  Score=55.98  Aligned_cols=36  Identities=28%  Similarity=0.230  Sum_probs=33.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC-CC-eEEEEecCCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK-GY-IVHTTLRPNLE   42 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~   42 (341)
                      +.|||.|+| .|++|..++..|++. |+ +|++++| +..
T Consensus        17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~-~~~   54 (478)
T 3g79_A           17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQR-NSK   54 (478)
T ss_dssp             SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECC-CCT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEEC-Chh
Confidence            458999998 899999999999999 99 9999999 765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	341
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	3e-25
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	3e-22
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-22
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-20
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	5e-17
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-15
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-15
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-15
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	9e-15
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	5e-14
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-12
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-12
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	7e-12
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-11
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-11
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	8e-11
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	2e-10
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	2e-09
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	3e-09
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	4e-09
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	1e-08
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-08
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	2e-08
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	4e-08
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	8e-07
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	4e-06
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	4e-06
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	7e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	9e-06
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-05

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  101 bits (252), Expect = 3e-25
 Identities = 57/336 (16%), Positives = 107/336 (31%), Gaps = 20/336 (5%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            V VTG  GFV S ++++LL+ GY V  T R +    + +                  ++
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDM 71

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
                ++  I+G   V H            Y  VV   +G           + +VKR + 
Sbjct: 72  LKQGAYDEVIKGAAGVAH--IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVL 129

Query: 128 TASV---LCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLS 184
           T+S    L   P  E      K    E+       P +   + L VY  SK ++E     
Sbjct: 130 TSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWK 189

Query: 185 YGSS---GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK 241
           +         + A+      G    P + +  +    +                  ++  
Sbjct: 190 FMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPA------LALMPP 243

Query: 242 LPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVP 300
              V   D+   H+ C+  P +   R + T        + +  ++ YP      ++ D  
Sbjct: 244 QYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQG 303

Query: 301 KREIKWGGT----KLEEKGFEYNYDLKMILDDSIKC 332
           +   K+        L+  G      ++  + D +  
Sbjct: 304 QDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGS 339

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 3e-22
 Identities = 59/335 (17%), Positives = 109/335 (32%), Gaps = 46/335 (13%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           ++ +TGG GFVGS L  KL+  G+ V          K  V+                 E+
Sbjct: 3   RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG---------HENFEL 53

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNV--VEACVGAAKKIASFCVKSGTVKRL 125
            + D  E      D ++H+A+P      Y+Y  +  ++        +     + G   RL
Sbjct: 54  INHDVVEPLYIEVDQIYHLASPA-SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARL 110

Query: 126 IYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSY 185
           +  ++       +      +  S D   +  P  P  C       Y E K  +E    +Y
Sbjct: 111 LLASTSEVYGDPEV-----HPQSEDYWGHVNPIGPRAC-------YDEGKRVAETMCYAY 158

Query: 186 G-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL-- 242
               G+EV    +    G          VS    + Q    E +         + G    
Sbjct: 159 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNF--ILQALQGEPL--------TVYGSGSQ 208

Query: 243 --PLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVP 300
                ++ D+    +  M    +S      N    +    + L +N      + ++L   
Sbjct: 209 TRAFQYVSDLVNGLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA 267

Query: 301 KREIKW---GGTKLEEK-GFEYNYDLKMILDDSIK 331
           + + +       K +   G+E    L+  L+ +I 
Sbjct: 268 QDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIH 302

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 92.5 bits (229), Expect = 8e-22
 Identities = 44/355 (12%), Positives = 106/355 (29%), Gaps = 55/355 (15%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ +TGG GF+GS +++ ++         +   L     ++ L  +  +  R  F  A+I
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNID-KLTYAGNLESLSDISESN-RYNFEHADI 59

Query: 68  YDPDTFENAIQG--CDFVFHVATP------LQHIDGYLYKNVVEACV---GAAKKIASFC 116
            D        +    D V H+A        +     ++  N+V        A K  ++  
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119

Query: 117 VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKM 176
                  R  + ++      L          ++     T    P +        Y  SK 
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSP-------YSASKA 172

Query: 177 KSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDT 235
            S+  + ++  + GL  +        G    PY      +   +      + +       
Sbjct: 173 SSDHLVRAWRRTYGLPTIVTNCSNNYG----PYHFPEKLIPLVILNALEGKPL------- 221

Query: 236 EEILGKL----PLVHIDDVCEAHIFCMEKPSMSGRF-FCTNVFVSSAEIASCLQQNYPEF 290
             I GK       ++++D   A    + +      +    +    + ++   +       
Sbjct: 222 -PIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLL--- 277

Query: 291 HIKQEYLDVPKREIKWGG-------------TKLEEK-GFEYNYDLKMILDDSIK 331
                     + +I +                K+  + G++     +  +  +++
Sbjct: 278 DEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVE 332

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 88.0 bits (217), Expect = 2e-20
 Identities = 59/340 (17%), Positives = 103/340 (30%), Gaps = 48/340 (14%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRP----NLEDKSKVDLLKSLPGAETRLIFF 63
           ++ VTGG GF+GS  +++LL   Y            +L        L  +     RL F 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADP-RLRFV 60

Query: 64  EAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNV-VEACVGAAKKIASFCVKSGTV 122
             +I D       ++G D + H A            +V  E  V   + +    V +G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV- 119

Query: 123 KRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKEL 182
            R+++  S        + G      S  E+    P+ P          Y  SK  S+   
Sbjct: 120 GRVVH-VSTNQVYGSIDSG------SWTESSPLEPNSP----------YAASKAGSDLVA 162

Query: 183 LSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC-QLTNNEYVYQTLRDTEEILG 240
            +Y  + GL+V         G    PY   P  +I      L +   +         + G
Sbjct: 163 RAYHRTYGLDVRITRCCNNYG----PYQH-PEKLIPLFVTNLLDGGTL--------PLYG 209

Query: 241 KL----PLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEY 296
                   VH DD C      +        +        +    + +  +          
Sbjct: 210 DGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVR 269

Query: 297 LDVPKR----EIKWGGTKLEEK-GFEYNYDLKMILDDSIK 331
               ++         G K+E + G+         L  +++
Sbjct: 270 KVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVR 309

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 78.8 bits (193), Expect = 5e-17
 Identities = 48/332 (14%), Positives = 106/332 (31%), Gaps = 30/332 (9%)

Query: 6   NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEA 65
           N K+ +TG  GF+ S + ++L  +G+ V        + K    + + +   E    F   
Sbjct: 15  NLKISITGAGGFIASHIARRLKHEGHYVI-----ASDWKKNEHMTEDMFCDE----FHLV 65

Query: 66  EIYDPDTFENAIQGCDFVFHVATP--LQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK 123
           ++   +      +G D VF++A            +  ++      +  +      +G +K
Sbjct: 66  DLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IK 124

Query: 124 RLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL 183
           R  Y +S       K+  +        +     P             +   K+ +E+   
Sbjct: 125 RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDA----------FGLEKLATEELCK 174

Query: 184 SYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL 242
            Y    G+E        + G           +      +   +   ++   D  +     
Sbjct: 175 HYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQT---R 231

Query: 243 PLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKR 302
               ID+  E  +   +          ++  VS  E+A  +  ++ E  +   ++  P+ 
Sbjct: 232 SFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV-LSFEEKKLPIHHIPGPEG 290

Query: 303 EIKWGG--TKLEEK-GFEYNYDLKMILDDSIK 331
                     ++EK G+  N  LK  L  +  
Sbjct: 291 VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYF 322

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 74.5 bits (182), Expect = 2e-15
 Identities = 44/359 (12%), Positives = 97/359 (27%), Gaps = 51/359 (14%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPN--LEDKSKVDLLKSLPGAETRLIFFEA 65
              +TG  G  GS+L + LL+KGY VH   R       +    + +       +      
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 66  EIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKN---VVEACVGAAKKIASFCVKSGT- 121
           ++ D       ++                   +++     +       ++       G  
Sbjct: 63  DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122

Query: 122 -VKRLIYTASVLCASPLKEDGSAGYKDS----IDETCYTPPDHPLTCHNEYLRVYIESKM 176
              R    ++           S  Y         ET    P +P +        Y  +K+
Sbjct: 123 KKTRFYQAST-----------SELYGLVQEIPQKETT---PFYPRSP-------YAVAKL 161

Query: 177 KSEKELLSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDT 235
            +    ++Y  S G+      L           +     +   +  +         L + 
Sbjct: 162 YAYWITVNYRESYGMYACNGILFNHES-PRRGETFVTRKITRAIANIAQGLESCLYLGNM 220

Query: 236 EEILGKLPLVHIDDVCEAHIFCMEKPSM------SGRFFCTNVFVSSAEIASCLQQNY-- 287
           +         H  D  +     +++         +G  +    FV  A     ++  +  
Sbjct: 221 DS---LRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEG 277

Query: 288 -----PEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKSGYLPQ 341
                    +     D P  +       ++ + F       ++ D + K   K G+ P+
Sbjct: 278 TGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPT-KAHEKLGWKPE 335

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (179), Expect = 3e-15
 Identities = 48/342 (14%), Positives = 96/342 (28%), Gaps = 32/342 (9%)

Query: 11  VTGGEGFVGSWLIKKLLDKGYIVHTTLR-PNLEDKSKVDLLKSLPGA--ETRLIFFEAEI 67
           +TG  G  GS+L + LL+KGY VH  +R  +  +  +++ L   P A  E  +     ++
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNV---VEACVGAAKKIASFCVKSG--TV 122
            D       I             Q      +       +       ++       G    
Sbjct: 66  TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125

Query: 123 KRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKEL 182
            +    ++      ++E           ET    P +P +        Y  +K+ +   +
Sbjct: 126 VKFYQASTSELYGKVQEIP-------QKETT---PFYPRSP-------YGAAKLYAYWIV 168

Query: 183 LSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK 241
           +++  +  L  V   L         P              +               +  K
Sbjct: 169 VNFREAYNLFAVNGILFNHES----PRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK 224

Query: 242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPK 301
               H  D  EA    ++          T    S  E       +  +  + +   +   
Sbjct: 225 RDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEV 284

Query: 302 REIKWGGTKLEEKGFEYN--YDLKMILDDSIKCGRKSGYLPQ 341
              K  G        +Y    ++  +  D  K  +K  + P+
Sbjct: 285 GRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPR 326

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 73.1 bits (178), Expect = 4e-15
 Identities = 47/341 (13%), Positives = 107/341 (31%), Gaps = 43/341 (12%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            + VTGG GF+GS  +  + +    VH T+   L        L+++ G   R+     +I
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILG--DRVELVVGDI 61

Query: 68  YDPDTFENAIQGCDFVF------HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGT 121
            D +  +      D +       H    L     +++ N +                   
Sbjct: 62  ADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHV 121

Query: 122 VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKE 181
               +Y        PL+ED     +   ++       +P +        Y  +K  S+  
Sbjct: 122 STDEVY-----GDLPLREDLPGHGEGPGEKFTAETNYNPSSP-------YSSTKAASDLI 169

Query: 182 LLSYGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG 240
           + ++  S G++          G    PY      +   +  +              ++ G
Sbjct: 170 VKAWVRSFGVKATISNCSNNYG----PYQHIEKFIPRQITNILAGIKP--------KLYG 217

Query: 241 KL----PLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVFVSSAEIASCLQQNYPEFHIKQE 295
           +       +H +D        + K  M        +   ++ E+   + +   +     +
Sbjct: 218 EGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYD 277

Query: 296 YLDVPKREIKW---GGTKLEEK-GFEYNY-DLKMILDDSIK 331
           ++              +KL ++ G+   + D    L+++I+
Sbjct: 278 HVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQ 318

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 71.6 bits (174), Expect = 9e-15
 Identities = 48/335 (14%), Positives = 97/335 (28%), Gaps = 35/335 (10%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
              VTG  G  G++L K LL+KGY VH  +            L+ L G E  + + + ++
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVA--RRSSDTRWRLREL-GIEGDIQYEDGDM 58

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            D  + + A+             Q   G  +   V              V    V  L+ 
Sbjct: 59  ADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTT----------GVVDGLGVTHLLE 108

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG- 186
                         S      + +      + P    +     Y  +K+      ++Y  
Sbjct: 109 AIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRS----PYGVAKLYGHWITVNYRE 164

Query: 187 SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVH 246
           S GL   +  L             T   V   + ++   +     L + +          
Sbjct: 165 SFGLHASSGILFNHESPLRGIEFVTRK-VTDAVARIKLGKQQELRLGNVDAK---RDWGF 220

Query: 247 IDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIK-QEYLDVPKREIK 305
             D  EA    +++         T V  +   +    Q  +    +  +++L +     +
Sbjct: 221 AGDYVEAMWLMLQQDKADDYVVATGVTTT---VRDMCQIAFEHVGLDYRDFLKIDPAFFR 277

Query: 306 WGG--------TKLEEK-GFEYNYDLKMILDDSIK 331
                       K +   G++    L  ++   ++
Sbjct: 278 PAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVE 312

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 69.5 bits (169), Expect = 5e-14
 Identities = 42/346 (12%), Positives = 96/346 (27%), Gaps = 62/346 (17%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           +V + G  G VGS + ++L  +G +        L  + +++LL                 
Sbjct: 4   RVFIAGHRGMVGSAIRRQLEQRGDVELV-----LRTRDELNLL----------------- 41

Query: 68  YDPDTFENAIQG--CDFVFHVATPLQHIDGYLYKNV--VEACVGAAKKIASFCVKSGTVK 123
            D     +       D V+  A  +  I          +   +     I     ++  V 
Sbjct: 42  -DSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VN 99

Query: 124 RLIYTASVLCASPLKEDGSAGYKDSIDETC--YTPPDHPLTCHNEYLRVYIESKMKSEKE 181
           +L++  S      L +         + E+       +            Y  +K+   K 
Sbjct: 100 KLLFLGSSCIYPKLAKQP-------MAESELLQGTLEPTNEP-------YAIAKIAGIKL 145

Query: 182 LLSYG-SSGLEVVALALGVVAG-----DTNLPYSSTPVSVIGGLCQLTNNEYVY-----Q 230
             SY    G +  ++    + G       +  +    +              V       
Sbjct: 146 CESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT 205

Query: 231 TLRDTEEILG-----KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQ 285
            +R+   +          +    +V   +   M      G      +   +  IA  +  
Sbjct: 206 PMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGY 265

Query: 286 NYPEFHIKQEYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIK 331
                    +    P++ +    T+L + G+ +   L+  L  + +
Sbjct: 266 KGRVVFDASKPDGTPRKLLD--VTRLHQLGWYHEISLEAGLASTYQ 309

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 65.4 bits (158), Expect = 2e-12
 Identities = 54/346 (15%), Positives = 108/346 (31%), Gaps = 42/346 (12%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           +V VTGG G++GS    +LL  G+ V          +S + +++ L G      F E +I
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGG--KHPTFVEGDI 59

Query: 68  YDPDTFENAIQ--GCDFVFHVATPLQHIDGYLYKNV--VEACVGAAKKIASFCVKSGTVK 123
            +       +     D V H A  L+ +   + K +   +  V    ++ S    +  VK
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAG-LKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VK 117

Query: 124 RLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL 183
             I       +S     G       ++      P  P       +   +    K++    
Sbjct: 118 NFI------FSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP--- 168

Query: 184 SYGSSGLEVVALALGVVAG-----DTNLPYSSTPVSVIGGLCQLTNNE----YVYQTLRD 234
                   +  L      G     D        P +++  + Q+         ++     
Sbjct: 169 -----DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP 223

Query: 235 TEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSS--------AEIASCLQQN 286
           TE+  G    +H+ D+ + H+  MEK +        N+               +    + 
Sbjct: 224 TEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283

Query: 287 YPEFHIKQEYLDVPKREIKWGGTKLEEK-GFEYNYDLKMILDDSIK 331
                  +   D+P        +K + +  +     L  +  D+  
Sbjct: 284 VNYHFAPRREGDLPAYWADA--SKADRELNWRVTRTLDEMAQDTWH 327

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 64.7 bits (156), Expect = 3e-12
 Identities = 20/151 (13%), Positives = 44/151 (29%), Gaps = 7/151 (4%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
            + V G  G  G+ LI+     G+ V   +          + L+++P        F+  +
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHS--LKGLIAEELQAIPNVT----LFQGPL 58

Query: 68  YDP-DTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI 126
            +     +   +G    F   T     +  + K++ +A   A                  
Sbjct: 59  LNNVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG 118

Query: 127 YTASVLCASPLKEDGSAGYKDSIDETCYTPP 157
              +V   +P     +   +  +  T     
Sbjct: 119 PWPAVPMWAPKFTVENYVRQLGLPSTFVYAG 149

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 63.2 bits (152), Expect = 7e-12
 Identities = 47/336 (13%), Positives = 93/336 (27%), Gaps = 16/336 (4%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ +TGG GF+GS L    L +G  +      NL  K   D L  L        F   +I
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVF--DNLSRKGATDNLHWLSSLG-NFEFVHGDI 58

Query: 68  YDPDTFENAIQGC--DFVFHVATPLQHIDGYLY-KNVVEACVGAAKKIASFCVKSGTVKR 124
            + +     I     D  FH+A  +             E  VG    +     +  +   
Sbjct: 59  RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCN 118

Query: 125 LIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLS 184
           +IY+++      L++      +               T  + +           +  L  
Sbjct: 119 IIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDY 178

Query: 185 YGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPL 244
               GL  V      + G                   +     + +    +        +
Sbjct: 179 ARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238

Query: 245 VHIDDVCEAHIFCMEKPS-----MSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDV 299
           +H +D+   +   +   S                +S  E+   L ++Y    ++   L V
Sbjct: 239 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLL-EDYCNIDMRFTNLPV 297

Query: 300 PKREIKW---GGTKLEEK-GFEYNYDLKMILDDSIK 331
            + + +       K+     +      K  +     
Sbjct: 298 RESDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYD 333

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 61.6 bits (148), Expect = 2e-11
 Identities = 43/337 (12%), Positives = 97/337 (28%), Gaps = 30/337 (8%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE-DKSKVDLLKSLPGAET--RLIFFE 64
              +TG  G  GS+L + LL KGY VH  +R +   +  +++ +   P       +    
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 65  AEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKR 124
           A++ D  +    I             Q      ++   +         A   +++     
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEI-PDYTADVVATGALRLLEAVRSHT 121

Query: 125 LIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLS 184
           +    +V        +          ET    P HP + +         SK  +    ++
Sbjct: 122 IDSGRTVKYYQAGSSEMFGSTPPPQSETT---PFHPRSPYA-------ASKCAAHWYTVN 171

Query: 185 YG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP 243
           Y  + GL      L           +     +   L ++         L + +       
Sbjct: 172 YREAYGLFACNGILFNHES-PRRGENFVTRKITRALGRIKVGLQTKLFLGNLQA---SRD 227

Query: 244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKRE 303
                D  EA    +++         T    +                  ++Y+++ +R 
Sbjct: 228 WGFAGDYVEAMWLMLQQEKPDDYVVATEEGHT--VEEFLDVSFGYLGLNWKDYVEIDQRY 285

Query: 304 IKWGG--------TKLEEK-GFEYNYDLKMILDDSIK 331
            +           +K +E  G++     + ++   + 
Sbjct: 286 FRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVD 322

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (146), Expect = 4e-11
 Identities = 52/358 (14%), Positives = 113/358 (31%), Gaps = 44/358 (12%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVH------TTLRPNLEDKSKVDLLKSLPGAETRLI 61
           KV VTGG G++GS  + +LL+ GY+           R        +  ++ L G    + 
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR--SVE 61

Query: 62  FFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGT 121
           F E +I D    +   +   F+  +        G   +  ++               +  
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDY-------YRVNLTGTIQ 114

Query: 122 VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKE 181
           +  ++    V                ++       P             Y +SK   E+ 
Sbjct: 115 LLEIMKAHGVKNLVFS-------SSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167

Query: 182 LLSYGSS--GLEVVALALGVVAG-----DTNLPYSSTPVSVIGGLCQLTNNE----YVYQ 230
           +     +      V L      G              P +++  + Q+         V+ 
Sbjct: 168 IRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFG 227

Query: 231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV----FVSSAEIASCLQQN 286
              DTE+  G    +H+ D+ + HI  + K          N+      S  ++   +++ 
Sbjct: 228 NDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKA 287

Query: 287 YPEFHIKQEYLDVPKREIKWGG---TKLEEK-GFEYNYDLKMILDDSIKCGRK--SGY 338
                I  + +   + ++       +  +E+ G+     L  + +D  +  ++  SG+
Sbjct: 288 SG-KKIPYKVVARREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPSGF 344

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.1 bits (144), Expect = 8e-11
 Identities = 46/349 (13%), Positives = 102/349 (29%), Gaps = 42/349 (12%)

Query: 9   VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY 68
           V VTGG G++GS  + +L++ GY        +      V  L+ L      + F+E ++ 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLC 61

Query: 69  DPDTFENAIQ--GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI 126
           D    E   +    D V H A      +                 +    ++   V + +
Sbjct: 62  DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFV 121

Query: 127 YTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG 186
                  +S     G A    ++       P  P          Y  +K   E  L    
Sbjct: 122 ------FSSSATVYGDATRFPNMIPIPEECPLGPTNP-------YGHTKYAIENILNDLY 168

Query: 187 SS---GLEVVALALGVV-----AGDTNLPYSSTPVSVIGGLCQLTNNE----YVYQTLRD 234
           +S     +   L          +G         P +++  + Q+        Y++    D
Sbjct: 169 NSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD 228

Query: 235 TEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFC--------TNVFVSSAEIASCLQQN 286
           + +       +H+ D+ + HI  ++                  +    +  E+     + 
Sbjct: 229 SRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKA 288

Query: 287 YPEFHIKQEYLDVPKREIKW---GGTKLEEK-GFEYNYDLKMILDDSIK 331
                +  +       ++        + + +  ++    ++    D  K
Sbjct: 289 S-GIDLPYKVTGRRAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWK 336

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 59.2 bits (142), Expect = 2e-10
 Identities = 48/339 (14%), Positives = 97/339 (28%), Gaps = 37/339 (10%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAE--TRLIFFEA 65
              +TG  GF+GS L++ LL     V          +  +D ++SL   +  +   F + 
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

Query: 66  EIYDPDTFENAIQGCDFVFHVATPLQHIDGYLY-KNVVEACVGAAKKIASFCVKSGTVKR 124
           +I + D   NA  G D+V H A                   +     +      +     
Sbjct: 78  DIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSF 137

Query: 125 LIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLS 184
               +S                    E        PL+        Y  +K  +E     
Sbjct: 138 TYAASSSTYGDH--------PGLPKVEDT---IGKPLSP-------YAVTKYVNELYADV 179

Query: 185 YGSS-GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP 243
           +    G   + L    V G    P  +    +      +   + VY              
Sbjct: 180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGET----SRD 235

Query: 244 LVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSS-------AEIASCLQQNYPEFHIKQEY 296
             +I++  +A++        +                     +   L +N   +H +  Y
Sbjct: 236 FCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVY 295

Query: 297 LDVPKREIKW---GGTKLEEK-GFEYNYDLKMILDDSIK 331
            D  + +++      +K  +  G+   YD+   +  ++ 
Sbjct: 296 RDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMP 334

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.8 bits (130), Expect = 2e-09
 Identities = 27/265 (10%), Positives = 53/265 (20%), Gaps = 41/265 (15%)

Query: 5   SNFK-VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFF 63
           +N   V VTG  G  G  + KKL +         +  +      + +    G E  +   
Sbjct: 1   ANLPTVLVTGASGRTGQIVYKKLKEGSDKF--VAKGLVRSAQGKEKI----GGEADVFIG 54

Query: 64  EAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK 123
           +    D             +   A P         K      +    +        G   
Sbjct: 55  DITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKN 114

Query: 124 RLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELL 183
           ++           +      G             +  +        +             
Sbjct: 115 QIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPY------ 168

Query: 184 SYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP 243
                      +  G +              ++G   +L   +                 
Sbjct: 169 ---------TIIRAGGLLD----KEGGVRELLVGKDDELLQTDTKT-------------- 201

Query: 244 LVHIDDVCEAHIFCMEKPSMSGRFF 268
            V   DV E  I  +       + F
Sbjct: 202 -VPRADVAEVCIQALLFEEAKNKAF 225

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 55.2 bits (131), Expect = 3e-09
 Identities = 41/334 (12%), Positives = 96/334 (28%), Gaps = 61/334 (18%)

Query: 2   DHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR-PNLEDKSKVDLLKSLPGAETRL 60
           D KS  +V + GG G++G  ++   +  G+  +   R   + +  KV +L      +   
Sbjct: 1   DKKS--RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF--KQLGA 56

Query: 61  IFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSG 120
              EA + D     +A++  D V             L +  +               ++G
Sbjct: 57  KLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEA----------IKEAG 106

Query: 121 TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEK 180
            +KR +                     S         +H L   +       + +   E 
Sbjct: 107 NIKRFLP--------------------SEFGMDPDIMEHALQPGSITFIDKRKVRRAIEA 146

Query: 181 ELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILG 240
             + Y         ++  + AG      +     ++    ++                  
Sbjct: 147 ASIPY-------TYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNV---------- 189

Query: 241 KLPLVHIDDVCEAHIFCMEKPSMSGRFF---CTNVFVSSAEIASCLQQNYPEFHIKQEYL 297
           K   V  DDV    I  ++ P    +          +S  E+    ++   +     + +
Sbjct: 190 KGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ---NLDKI 246

Query: 298 DVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIK 331
            +  ++       +++K +E       +     +
Sbjct: 247 YISSQDFL---ADMKDKSYEEKIVRCHLYQIFFR 277

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.5 bits (127), Expect = 4e-09
 Identities = 17/127 (13%), Positives = 35/127 (27%), Gaps = 16/127 (12%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           K+ + G  G  G   + + +  GY V   +R         D  +              ++
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR---------DSSRLPSEGPRPAHVVVGDV 55

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
                 +  + G D V  +      +      +     + AA K          V +++ 
Sbjct: 56  LQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-------VDKVVA 108

Query: 128 TASVLCA 134
             S    
Sbjct: 109 CTSAFLL 115

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.8 bits (127), Expect = 1e-08
 Identities = 53/360 (14%), Positives = 100/360 (27%), Gaps = 36/360 (10%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVH---TTLRPNLEDKSKVDLLKSLPGAETRL---- 60
           +V V GG+G+ G      L  K Y V      +R   + +  ++ L  +     R+    
Sbjct: 3   RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 62

Query: 61  -------IFFEAEIYDPDTFENAIQ------GCDFVFHVATPLQHIDGYLYKNVVEACVG 107
                    +  +I D +    + +         F    + P   ID           V 
Sbjct: 63  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 122

Query: 108 AAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEY 167
               +     + G    L+   ++        D   GY             +P    + Y
Sbjct: 123 GTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFY 182

Query: 168 LRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY 227
               +           ++G    ++    +  V  D    +      +       T    
Sbjct: 183 HLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNR 242

Query: 228 VYQTLRDTEEIL------GKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVF---VSSAE 278
                     +            + I D  +     +  P+ +G F   N F    S  E
Sbjct: 243 FCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNE 302

Query: 279 IASCLQQNYPEFHIKQEYLDVPK-------REIKWGGTKLEEKGFEYNYDLKMILDDSIK 331
           +AS + +   +  +  + + VP               TKL E G E +Y    +LD  + 
Sbjct: 303 LASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLN 362

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 53.3 bits (126), Expect = 1e-08
 Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 46/308 (14%)

Query: 5   SNFKVCVTGGEGFVGSWLIKKLL-DKGYIV--------------HTTLRPNLEDKSKVDL 49
           S+ +V V GG G++GS  ++ LL D  + V              H   R N+  K +   
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD 60

Query: 50  LKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAA 109
               P A+        ++ + D           +  V      +                
Sbjct: 61  GPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNN 120

Query: 110 KKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLR 169
                  +++  + +         A+            + +         P +       
Sbjct: 121 VVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESP------ 174

Query: 170 VYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGL-----CQLT 223
            Y ESK+ +E+ +     + G++ + L      G                L      ++ 
Sbjct: 175 -YGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVM 233

Query: 224 NNEYVYQTLRDTEEILGKLPL------------------VHIDDVCEAHIFCMEKPSMSG 265
           ++    Q L   E+      +                  VH+ D+  AHI  ++     G
Sbjct: 234 SDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLG 293

Query: 266 RFFCTNVF 273
               +  F
Sbjct: 294 PNDKSKYF 301

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 52.5 bits (124), Expect = 2e-08
 Identities = 16/107 (14%), Positives = 33/107 (30%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           ++ + G  G++G  + K  LD G+     +R +    +            +        I
Sbjct: 5   RILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIAS 114
            D  +   A++  D V      LQ          ++      +   S
Sbjct: 65  DDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPS 111

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 51.8 bits (122), Expect = 4e-08
 Identities = 43/328 (13%), Positives = 84/328 (25%), Gaps = 11/328 (3%)

Query: 8   KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
           +V VTG  GF G WL   L   G  V           S  +  +   G +        +I
Sbjct: 10  RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQ----SEIGDI 65

Query: 68  YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY 127
            D +    +I+            Q +    Y   VE                  V  +  
Sbjct: 66  RDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKA 125

Query: 128 TASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGS 187
             ++          +  +     E        P +       +   S   S     +YG 
Sbjct: 126 VVNITSDKC---YDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQ 182

Query: 188 SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHI 247
            G  V  +  G V G  +         ++    Q               + + +    ++
Sbjct: 183 HGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYL 242

Query: 248 DDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKW- 306
               + +    E                   I   + + + E    Q   +    E  + 
Sbjct: 243 LLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYL 302

Query: 307 --GGTKLEEK-GFEYNYDLKMILDDSIK 331
               +K + + G+   ++L   L+  + 
Sbjct: 303 KLDCSKAKMQLGWHPRWNLNTTLEYIVG 330

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 48.0 bits (112), Expect = 8e-07
 Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 8/79 (10%)

Query: 8  KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI 67
          +V + G  GF+G+ L ++LL + +     L     D     L            F E +I
Sbjct: 2  RVLILGVNGFIGNHLTERLLREDHYEVYGLD-IGSDAISRFLNHP------HFHFVEGDI 54

Query: 68 YDPDTF-ENAIQGCDFVFH 85
               + E  ++ CD V  
Sbjct: 55 SIHSEWIEYHVKKCDVVLP 73

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 45.2 bits (105), Expect = 4e-06
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 8  KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE--DKSKVD 48
          K+ +TG  G +G  + K+L  K   V  T   +L+  +   V+
Sbjct: 3  KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVN 45

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 45.4 bits (105), Expect = 4e-06
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 9  VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL 53
          + VTGG GF+GS ++K L DKG      +  NL+D +K   L  L
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVVD-NLKDGTKFVNLVDL 45

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 44.9 bits (104), Expect = 7e-06
 Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 5/46 (10%)

Query: 8  KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRP-----NLEDKSKVD 48
           + + G  G VG  L + L   G ++   +       +  +   V 
Sbjct: 2  NILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVA 47

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.6 bits (101), Expect = 9e-06
 Identities = 6/31 (19%), Positives = 13/31 (41%)

Query: 8  KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR 38
          +V + G  G  G  L+ ++L +  +      
Sbjct: 4  RVLLAGATGLTGEHLLDRILSEPTLAKVIAP 34

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (98), Expect = 3e-05
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 5  SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTL 37
           N  V + G  G  G  L+K++L++G     TL
Sbjct: 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTL 45

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	341
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	100.0
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.96
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.94
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.94
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.92
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.86
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.86
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.86
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.86
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.86
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.86
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.85
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.85
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.85
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.84
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.84
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.84
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.84
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.84
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.84
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.84
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.84
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.84
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.84
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.84
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.83
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.83
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.83
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.83
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.83
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.82
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.82
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.82
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.82
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.82
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.81
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.81
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.8
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.8
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.79
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.79
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.79
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.79
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.79
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.78
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.78
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.78
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.77
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.77
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.77
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.76
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.75
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.75
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.74
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.74
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.73
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.73
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.68
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.68
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.68
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.68
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.67
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.66
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.62
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.62
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.59
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.58
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.54
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.49
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.41
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.33
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.22
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.56
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.53
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.48
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.43
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.42
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.38
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.37
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.24
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.18
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.18
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.13
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.08
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.07
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.06
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.05
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.02
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.95
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.93
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.93
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.91
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.91
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.9
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.9
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.89
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.84
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.78
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.75
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.73
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.7
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.7
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.69
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.69
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.67
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.67
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.62
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.62
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.59
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.56
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.53
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.51
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.51
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.51
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.48
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.47
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.45
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.43
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.42
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.41
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.34
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.31
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.3
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.28
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.25
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.22
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.19
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	97.11
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.11
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.08
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.03
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.02
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.0
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.0
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.98
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.96
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.89
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.87
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.84
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.72
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.68
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.66
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.63
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.55
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.53
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.48
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.47
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.46
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	96.39
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.37
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	96.37
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.37
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.32
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.3
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	96.26
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.26
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.25
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	96.25
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.17
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.16
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.15
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.11
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.09
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.06
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.05
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.03
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.98
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.98
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	95.94
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.94
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.91
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	95.9
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.9
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.86
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.83
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	95.82
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	95.8
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.72
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	95.71
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	95.66
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.57
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	95.57
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.55
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.52
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.52
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.49
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.47
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	95.42
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.34
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.29
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.25
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.22
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.21
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.19
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.16
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.15
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.15
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.12
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.07
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.06
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.04
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	95.03
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.94
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.92
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	94.88
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.82
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	94.79
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.76
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.63
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.63
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	94.61
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.59
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	94.41
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.4
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	94.37
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.29
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.25
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	94.23
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.18
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.09
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.05
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.0
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.99
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.86
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	93.82
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.79
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	93.73
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.55
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.36
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.3
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.29
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.27
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	93.27
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.23
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.11
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	92.97
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	92.68
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	92.63
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.6
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	92.59
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.54
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.54
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	92.37
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	92.26
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.24
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	92.2
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	92.16
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.02
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.97
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	91.83
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.82
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.38
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.78
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.77
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.7
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.6
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	90.34
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	90.33
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	90.28
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	90.26
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	90.02
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.0
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	89.61
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	89.6
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.36
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	89.2
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	88.93
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	88.82
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	88.73
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	88.35
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	88.04
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	88.03
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.98
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	87.96
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	87.84
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.79
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	87.68
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.65
d1x74a1	359	2-methylacyl-CoA racemase Mcr {Mycobacterium tuber	87.59
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	87.56
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.22
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	86.56
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	86.47
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	86.44
d2vjma1	427	Formyl-CoA transferase {Oxalobacter formigenes [Ta	85.6
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	83.87
d1k3ta1	190	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.13
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	82.74
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	82.74
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	82.72
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	82.3
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	82.23
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.18
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.95
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	81.12
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	80.98
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	80.92
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	80.92
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	80.75
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	80.61

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.8e-47  Score=345.86  Aligned_cols=311  Identities=13%  Similarity=0.095  Sum_probs=233.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      ||||||||+||||++|+++|++.|++|++..+ +.........+..+. ..++++++.+|++|+..+.++++  ++|+||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d-~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi   78 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNID-KLTYAGNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEE-CCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEe-CCCccccHHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence            78999999999999999999999998666555 443333334444432 23589999999999999999987  589999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcC--------CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCC
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSG--------TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYT  155 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~--------~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~  155 (341)
                      ||||...... ...+..++++|+.++.+++++|++.+        ++++|||+||..+++ ...      ..+..|....
T Consensus        79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg-~~~------~~~~~~~~~~  151 (361)
T d1kewa_          79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYG-DLP------HPDEVENSVT  151 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGC-CCC------CGGGSCTTSC
T ss_pred             ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeC-CCc------cCCccccccC
Confidence            9999866543 22334789999999999999998864        145999999999554 322      1122221111


Q ss_pred             CCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc--ccccc
Q 019415          156 PPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY--VYQTL  232 (341)
Q Consensus       156 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  232 (341)
                      .+-........|.+.||.+|.++|.+++.+. +++++++++||++||||+....    .+++.++..+..+.+  +++++
T Consensus       152 ~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~----~~i~~~i~~~~~g~~~~v~g~g  227 (361)
T d1kewa_         152 LPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE----KLIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT----SHHHHHHHHHHHTCCEEEETTS
T ss_pred             CCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC----cHHHHHHHHHHcCCCcEEeCCC
Confidence            0000000023467899999999999999998 6699999999999999976543    467777777666652  34555


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCC-------CCccccC---cCCCCc
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYP-------EFHIKQE---YLDVPK  301 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~-------~~~~~~~---~~~~~~  301 (341)
                      .+      .|+|+|++|+|+++..++++...+++||++++ .+++.|+++.+.+.++       .......   ..++..
T Consensus       228 ~~------~r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (361)
T d1kewa_         228 DQ------IRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHD  301 (361)
T ss_dssp             CC------EEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCC
T ss_pred             Ce------EEeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCC
Confidence            54      99999999999999999998777779999885 5999999999987651       1111111   123455


Q ss_pred             ceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          302 REIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       302 ~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ....+|++|+++ |||+|+++++++|+++++|+++.
T Consensus       302 ~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n  337 (361)
T d1kewa_         302 RRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             CBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             ceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            677899999987 99999999999999999999775

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7e-47  Score=341.56  Aligned_cols=302  Identities=14%  Similarity=0.053  Sum_probs=221.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc--hhhhhHhhhC-CCCCCceEEEecCCCChHHHHHHhcC--CC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED--KSKVDLLKSL-PGAETRLIFFEAEIYDPDTFENAIQG--CD   81 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d   81 (341)
                      |+|||||||||||++|+++|++.||+|++++| ..+.  ..+.+.+... ....++++++++|++|.+.+.+++++  +|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKR-RASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEEC-CCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            68999999999999999999999999999999 6542  1222222221 12346899999999999999999984  69


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPD  158 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~  158 (341)
                      +|||+|+...... ..+....+++|+.++.+|+++|++.+  +.++|||+||++ +||...      ..+++|+++.   
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~-vYG~~~------~~~~~E~~~~---  150 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE-LYGLVQ------EIPQKETTPF---  150 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GGTTCC------SSSBCTTSCC---
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchh-hhCCCC------CCCcCCCCCC---
Confidence            9999999876544 33445789999999999999999876  234799999998 565444      5689998733   


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccch
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDT  235 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  235 (341)
                             .|.++|+.||.++|++++.++ +++++++++||+++|||+.......+.+...+.....+..  ..++++.+ 
T Consensus       151 -------~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~-  222 (357)
T d1db3a_         151 -------YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDS-  222 (357)
T ss_dssp             -------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTC-
T ss_pred             -------CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCe-
Confidence                   346899999999999999998 5699999999999999975544111122333333333333  23344444 


Q ss_pred             hhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCcc------c--------------c
Q 019415          236 EEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHI------K--------------Q  294 (341)
Q Consensus       236 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~------~--------------~  294 (341)
                           .++|+|++|+|+++..++++. ..+.||++++ .+|+.|+++++.+.++....      .              .
T Consensus       223 -----~r~~~~v~D~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (357)
T d1db3a_         223 -----LRDWGHAKDYVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPG  296 (357)
T ss_dssp             -----EECCEEHHHHHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTT
T ss_pred             -----eecceeechHHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccc
Confidence                 899999999999999999864 4579999875 58999999999998741100      0              0


Q ss_pred             C-------------cCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHH
Q 019415          295 E-------------YLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCG  333 (341)
Q Consensus       295 ~-------------~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~  333 (341)
                      .             +.+.......+|++|+++ |||+|+++++++|++++++.
T Consensus       297 ~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~  349 (357)
T d1db3a_         297 VKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAND  349 (357)
T ss_dssp             CCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             cccCceeEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            0             001223345679999988 99999999999999997543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=2.3e-46  Score=333.70  Aligned_cols=299  Identities=19%  Similarity=0.187  Sum_probs=237.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeE------EEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIV------HTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |||||||||||||++|++.|+++|++|      +++++ .... .....+... .....+.++.+|+.+...+......+
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~-~~~~-~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~   77 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS-LTYA-GNRANLAPV-DADPRLRFVHGDIRDAGLLARELRGV   77 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC-CCTT-CCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeC-CCcc-ccHhHhhhh-hcCCCeEEEEeccccchhhhcccccc
Confidence            789999999999999999999999754      44433 2111 112222222 22458999999999999999999999


Q ss_pred             CEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDH  159 (341)
Q Consensus        81 d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~  159 (341)
                      |+|+|+|+...... .......+++|+.++.+++++|.+.+ +++|||+||++ +|+...      ..+++|+++.    
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~-~yg~~~------~~~~~E~~~~----  145 (322)
T d1r6da_          78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQ-VYGSID------SGSWTESSPL----  145 (322)
T ss_dssp             CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGG-GGCCCS------SSCBCTTSCC----
T ss_pred             ceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecce-eecCCC------CCCCCCCCCC----
Confidence            99999998866544 33345888999999999999999998 99999999998 554444      5678888733    


Q ss_pred             CCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchh
Q 019415          160 PLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTE  236 (341)
Q Consensus       160 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  236 (341)
                            .|.+.|+.+|.++|.+++.+. +++++++++||++||||++...    ..++.+++.+..+.  .+++++.+  
T Consensus       146 ------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~----~~i~~~i~~~~~~~~i~v~~~g~~--  213 (322)
T d1r6da_         146 ------EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE----KLIPLFVTNLLDGGTLPLYGDGAN--  213 (322)
T ss_dssp             ------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT----SHHHHHHHHHHTTCCEEEETTSCC--
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC----cHHHHHHHHHHcCCCcEEecCCCe--
Confidence                  346899999999999999998 6699999999999999976544    45777777666555  33455555  


Q ss_pred             hccCCCCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccC---cCCCCcceEeecchhhh
Q 019415          237 EILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQE---YLDVPKREIKWGGTKLE  312 (341)
Q Consensus       237 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~---~~~~~~~~~~~d~~k~~  312 (341)
                          .++|+|++|+|+++..++++...+++||++++ .+|+.|+++.+.+.++.......   ..+.......+|++|++
T Consensus       214 ----~r~~i~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  289 (322)
T d1r6da_         214 ----VREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIE  289 (322)
T ss_dssp             ----EEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHH
T ss_pred             ----EEccEEHHHHHHHHHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHH
Confidence                99999999999999999998777779999885 59999999999999853211111   12345556789999998


Q ss_pred             h-cCCcccccHHHHHHHHHHHHHHc
Q 019415          313 E-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       313 ~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      + |||+|+++++++|+++++|++++
T Consensus       290 ~~lg~~p~~~~eegI~~~i~w~~~n  314 (322)
T d1r6da_         290 RELGYRPQVSFADGLARTVRWYREN  314 (322)
T ss_dssp             HHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred             HHHCCCCCCCHHHHHHHHHHHHHHh
Confidence            7 99999999999999999999874

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-47  Score=338.57  Aligned_cols=298  Identities=17%  Similarity=0.150  Sum_probs=227.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +||||||||+||||++|+++|+++||+|++++| ....  ....+.... ....+.+...|+.+     .++.++|+|||
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~-~~~~--~~~~~~~~~-~~~~~d~~~~~~~~-----~~~~~~d~Vih   71 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDN-FFTG--RKRNVEHWI-GHENFELINHDVVE-----PLYIEVDQIYH   71 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSC--CGGGTGGGT-TCTTEEEEECCTTS-----CCCCCCSEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC-CCcC--CHHHHHHhc-CCCceEEEehHHHH-----HHHcCCCEEEE
Confidence            479999999999999999999999999999987 4432  111122211 12356666666644     35568999999


Q ss_pred             eccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccC
Q 019415           86 VATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCH  164 (341)
Q Consensus        86 ~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  164 (341)
                      +|+...... .......+++|+.++.+|+++|++.+ + +|||+||+++ |+...      ..+++|+.+...++     
T Consensus        72 lAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~v-y~~~~------~~~~~e~~~~~~~~-----  137 (312)
T d2b69a1          72 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEV-YGDPE------VHPQSEDYWGHVNP-----  137 (312)
T ss_dssp             CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGG-GBSCS------SSSBCTTCCCBCCS-----
T ss_pred             CcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChhe-ecCCC------CCCCCccccCCCCC-----
Confidence            999876533 33345889999999999999999988 4 8999999985 44333      45666665433322     


Q ss_pred             cchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhccCC
Q 019415          165 NEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEILGK  241 (341)
Q Consensus       165 ~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  241 (341)
                      ..|.+.|+.+|.++|.+++.++ ++|++++++||++||||+....  ...+++.++..+..+.  ..++++.+      .
T Consensus       138 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~--~~~~i~~~i~~~~~g~~i~i~~~g~~------~  209 (312)
T d2b69a1         138 IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN--DGRVVSNFILQALQGEPLTVYGSGSQ------T  209 (312)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTT--CCCHHHHHHHHHHHTCCEEEESSSCC------E
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCC--CccHHHHHHHHHHcCCCeEEeCCCCe------e
Confidence            2457999999999999999998 6699999999999999987665  4456777777665555  33455554      8


Q ss_pred             CCcccHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhhhh-cCC
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKLEE-KGF  316 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~-lg~  316 (341)
                      ++|+|++|++++++.+++. ...+.||++++ .+++.++++.+++.++. ..+..+   .++......+|++|+++ |||
T Consensus       210 r~~i~v~D~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw  287 (312)
T d2b69a1         210 RAFQYVSDLVNGLVALMNS-NVSSPVNLGNPEEHTILEFAQLIKNLVGS-GSEIQFLSEAQDDPQKRKPDIKKAKLMLGW  287 (312)
T ss_dssp             EECEEHHHHHHHHHHHHTS-SCCSCEEESCCCEEEHHHHHHHHHHHHTC-CCCEEEECCCTTCCCCCCBCCHHHHHHHCC
T ss_pred             EccEEHHHHHHHHHHHHhh-ccCCceEecCCcccchhhHHHHHHHHhCC-CCceEECCCCCCCCCeeeECHHHHHHHHCC
Confidence            9999999999999999875 45679999885 59999999999998842 222221   23455667889999987 999


Q ss_pred             cccccHHHHHHHHHHHHHHc
Q 019415          317 EYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       317 ~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +|.++++++|+++++|++++
T Consensus       288 ~p~~~l~~~I~~~i~w~~~~  307 (312)
T d2b69a1         288 EPVVPLEEGLNKAIHYFRKE  307 (312)
T ss_dssp             CCCSCHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999764

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-45  Score=330.25  Aligned_cols=309  Identities=17%  Similarity=0.140  Sum_probs=234.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      |||||||||||||++|++.|++.||+|++++| -... ...........  .+++.++++|++|.+.+.++++  ++|+|
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~-~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDN-LCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTV   77 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEEC-CCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhccCCCEE
Confidence            78999999999999999999999999999987 3322 12222222211  1479999999999999999998  79999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||+||...... .......+++|+.++.+++++|++.+ +++|||+||.++++ ...      ..+..|.+..       
T Consensus        78 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~-~~~------~~~~~e~~~~-------  142 (338)
T d1udca_          78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYG-DQP------KIPYVESFPT-------  142 (338)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC-SCC------SSSBCTTSCC-------
T ss_pred             EECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEc-ccc------cccccccccc-------
Confidence            99999765443 22345889999999999999999998 99999999998544 333      2334444321       


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-c-CCceEEEEecCceeCCCCCCC------CCCCchhhhhHhhHhcCc---ccccc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-S-SGLEVVALALGVVAGDTNLPY------SSTPVSVIGGLCQLTNNE---YVYQT  231 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~-~~~~~~vlRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~  231 (341)
                        ..|.+.|+.+|.++|.++..+. . .+++++++|++++||+.....      .....+++.+........   .++++
T Consensus       143 --~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~  220 (338)
T d1udca_         143 --GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGN  220 (338)
T ss_dssp             --CCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECS
T ss_pred             --CCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCC
Confidence              2357899999999999999776 3 489999999999999866532      112235666666554443   33455


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcC---CCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCc---CCCCcceE
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEK---PSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEY---LDVPKREI  304 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~  304 (341)
                      .....++.+.+||+|+.|++.++..++..   ....++||+++ ..+|+.|+++.+.+.++. +++..+   .+......
T Consensus       221 ~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~  299 (338)
T d1udca_         221 DYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAY  299 (338)
T ss_dssp             CSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBC
T ss_pred             CcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCC-CCceEECCCCCCCCCEe
Confidence            55566677799999999999888776543   22234899988 459999999999998842 233322   23345667


Q ss_pred             eecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          305 KWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       305 ~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .+|++|+++ |||+|+++++++|+++++|++++
T Consensus       300 ~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~  332 (338)
T d1udca_         300 WADASKADRELNWRVTRTLDEMAQDTWHWQSRH  332 (338)
T ss_dssp             CBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             eECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhc
Confidence            899999988 99999999999999999999988

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=2.6e-45  Score=329.43  Aligned_cols=306  Identities=16%  Similarity=0.110  Sum_probs=241.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC-chhhhhHhhhCCC--CCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE-DKSKVDLLKSLPG--AETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|+|||||||||||++|+++|++.||+|++++| ... .....+.......  ....++++.+|+.|...+......++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN-FATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC-CCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            4579999999999999999999999999999987 433 2222222222211  12479999999999999999999999


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHP  160 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~  160 (341)
                      +|+|+++...... ..+....+++|+.++.+++++|.+.+ +++|||+||.. +|+...      ..+++|+++.     
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~-vyg~~~------~~~~~E~~~~-----  160 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSS-TYGDHP------GLPKVEDTIG-----  160 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGG-GGTTCC------CSSBCTTCCC-----
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccce-eeCCCC------CCCccCCCCC-----
Confidence            9999998766543 33345889999999999999999998 99999999999 454444      5678888743     


Q ss_pred             CccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhh
Q 019415          161 LTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEE  237 (341)
Q Consensus       161 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  237 (341)
                           .|.+.|+.+|.++|++++.+. +.+++++++||++|||++..........+..++..+..+.  ..++++.+   
T Consensus       161 -----~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~---  232 (341)
T d1sb8a_         161 -----KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGET---  232 (341)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC---
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCE---
Confidence                 346899999999999999988 5689999999999999987766445556777777766555  34445555   


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcCCC-C-CceEEEec-cccCHHHHHHHHHHhCCCCccccC-------cCCCCcceEeec
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEKPS-M-SGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQE-------YLDVPKREIKWG  307 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~~~-~-~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~-------~~~~~~~~~~~d  307 (341)
                         .++|+||+|+|.++..++.... . .++||+++ ...|+.|+++.+.+.++...++..       ..++......+|
T Consensus       233 ---~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  309 (341)
T d1sb8a_         233 ---SRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLAD  309 (341)
T ss_dssp             ---EECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBC
T ss_pred             ---EEEEEEEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeC
Confidence               9999999999999999887643 2 34899988 459999999999988742222111       123445566789


Q ss_pred             chhhhh-cCCcccccHHHHHHHHHHHHHH
Q 019415          308 GTKLEE-KGFEYNYDLKMILDDSIKCGRK  335 (341)
Q Consensus       308 ~~k~~~-lg~~~~~~~~~~l~~~~~~~~~  335 (341)
                      ++|+++ |||+|+++++++|+++++||++
T Consensus       310 ~~k~~~~LGw~p~~sl~~gi~~ti~wy~~  338 (341)
T d1sb8a_         310 ISKAAKLLGYAPKYDVSAGVALAMPWYIM  338 (341)
T ss_dssp             CHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            999988 9999999999999999999987

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.1e-44  Score=328.00  Aligned_cols=304  Identities=15%  Similarity=0.109  Sum_probs=229.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++|||||||||||||++|+++|+++||+|++++| .... .       .........+..+|+++.+.+.++++++|+||
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~-~~~~-~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vi   84 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDW-KKNE-H-------MTEDMFCDEFHLVDLRVMENCLKVTEGVDHVF   84 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCS-S-------SCGGGTCSEEEECCTTSHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeC-CCcc-c-------hhhhcccCcEEEeechhHHHHHHHhhcCCeEe
Confidence            4699999999999999999999999999999987 4332 0       01111356789999999999999999999999


Q ss_pred             EeccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           85 HVATPLQHID--GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        85 ~~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      |+|+......  ..........|+.++.+++++|++.+ +++|||+||+. +|+...      ..+.+|.........  
T Consensus        85 h~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~-~~~~~~------~~~~~~~~~~~~e~~--  154 (363)
T d2c5aa1          85 NLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSAC-IYPEFK------QLETTNVSLKESDAW--  154 (363)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGG-GSCGGG------SSSSSSCEECGGGGS--
T ss_pred             ecccccccccccccccccccccccchhhHHHHhHHhhC-ccccccccccc-cccccc------cccccccccccccCC--
Confidence            9998776643  34456889999999999999999999 99999999998 444333      233333321111000  


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhH-hhHhcCc--cccccccchhhc
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGL-CQLTNNE--YVYQTLRDTEEI  238 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~  238 (341)
                       +..|.+.|+.+|.++|++++.+. ++|++++++||+++||+................ .......  ..++++.     
T Consensus       155 -~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~-----  228 (363)
T d2c5aa1         155 -PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL-----  228 (363)
T ss_dssp             -SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSC-----
T ss_pred             -cCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCC-----
Confidence             23457899999999999999998 669999999999999997765522233222222 2222222  3334444     


Q ss_pred             cCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCc--CCCCcceEeecchhhhh-c
Q 019415          239 LGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEY--LDVPKREIKWGGTKLEE-K  314 (341)
Q Consensus       239 ~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~-l  314 (341)
                       +.|+|+|++|++.+++.+++. ...+.||+++ ..+|+.|+++.+.+..+. ..++..  .+.......+|++|+++ |
T Consensus       229 -~~rd~i~v~D~~~~~~~~~~~-~~~~~~ni~~~~~~s~~~l~~~i~~~~g~-~~~i~~~~~~~~~~~~~~d~ska~~~L  305 (363)
T d2c5aa1         229 -QTRSFTFIDECVEGVLRLTKS-DFREPVNIGSDEMVSMNEMAEMVLSFEEK-KLPIHHIPGPEGVRGRNSDNNLIKEKL  305 (363)
T ss_dssp             -CEECCEEHHHHHHHHHHHHHS-SCCSCEEECCCCCEEHHHHHHHHHHTTTC-CCCEEEECCCCCCSBCEECCHHHHHHH
T ss_pred             -eEEEEeehhHHHHHHHHHHhC-CCCCeEEEecCCcccHHHHHHHHHHHhCC-CCceEeCCCCCCccccccCHHHHHHHh
Confidence             499999999999999999875 4567999987 569999999999998843 333332  23345566789999988 9


Q ss_pred             CCcccccHHHHHHHHHHHHHHc
Q 019415          315 GFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       315 g~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      ||+|.++++++|+++++|++++
T Consensus       306 Gw~p~~sleegi~~ti~w~~~~  327 (363)
T d2c5aa1         306 GWAPNMRLKEGLRITYFWIKEQ  327 (363)
T ss_dssp             SCCCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999653

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.2e-44  Score=323.94  Aligned_cols=307  Identities=13%  Similarity=0.109  Sum_probs=230.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC-CchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL-EDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +||||||||||||||++|+++|++.|++|.+++| +. +.......+...  ...+++++.+|++|.+.+..++.+++.|
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~-d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~~~v   77 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL-DKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKADAI   77 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEE-ECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEE-eCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhhhhh
Confidence            4799999999999999999999999998777665 32 111111222221  2358999999999999999999999999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCC-----CCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDG-----SAGYKDSIDETCYTPP  157 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~-----~~~~~~~~~E~~~~~~  157 (341)
                      +|+|+...... .......+++|+.++.++++++.+.+  .++|++||..+++......     .......++|.+    
T Consensus        78 ~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~----  151 (346)
T d1oc2a_          78 VHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET----  151 (346)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS----
T ss_pred             hhhhhcccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCC----
Confidence            99999876644 23345889999999999999999998  6899999998554211100     000011222322    


Q ss_pred             CCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccc
Q 019415          158 DHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRD  234 (341)
Q Consensus       158 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  234 (341)
                            ...|.+.|+.+|.++|.+++.++ +.+++++++||++||||+....    ..+..++..+..+.  ..++++.+
T Consensus       152 ------~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~----~~~~~~i~~~~~~~~~~i~~~g~~  221 (346)
T d1oc2a_         152 ------NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE----KFIPRQITNILAGIKPKLYGEGKN  221 (346)
T ss_dssp             ------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT----SHHHHHHHHHHHTCCCEEETTSCC
T ss_pred             ------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc----chhHHHHHHHHcCCceeEeCCCCc
Confidence                  23457899999999999999998 5699999999999999876543    34455554444443  34445554


Q ss_pred             hhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCcC---CCCcceEeecchh
Q 019415          235 TEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEYL---DVPKREIKWGGTK  310 (341)
Q Consensus       235 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~---~~~~~~~~~d~~k  310 (341)
                            .++|+|++|+|++++.++.++...+.||+++ +..++.++++.+.+.++.........   ++......+|++|
T Consensus       222 ------~r~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k  295 (346)
T d1oc2a_         222 ------VRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASK  295 (346)
T ss_dssp             ------EEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHH
T ss_pred             ------cccccchhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHH
Confidence                  9999999999999999999888888998877 56999999999999986443333221   3344566789999


Q ss_pred             hhh-cCCcccc-cHHHHHHHHHHHHHHc
Q 019415          311 LEE-KGFEYNY-DLKMILDDSIKCGRKS  336 (341)
Q Consensus       311 ~~~-lg~~~~~-~~~~~l~~~~~~~~~~  336 (341)
                      +++ |||+|++ +|+++|+++++|++++
T Consensus       296 ~~~~LGw~P~~t~l~e~i~~ti~w~~~n  323 (346)
T d1oc2a_         296 LRDELGWTPQFTDFSEGLEETIQWYTDN  323 (346)
T ss_dssp             HHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence            987 9999987 5999999999999875

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.8e-43  Score=314.69  Aligned_cols=302  Identities=14%  Similarity=0.036  Sum_probs=231.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      |+|||||||||||++|++.|+++||+|++++| ..+. .....+..+. .+++++++.+|++|.+.+.+.+.  .+++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r-~~~~-~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   77 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVA-RRSS-DTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQPQEVY   77 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CCSS-CCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEEC-CCCc-ccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccccccccc
Confidence            58999999999999999999999999999999 6554 2234444432 23589999999999999998886  478999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... ......+++.|+.++.+++++|++.+..++|++.||.. +|+...      ..+.+|+++.        
T Consensus        78 ~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~-~~~~~~------~~~~~E~~~~--------  142 (321)
T d1rpna_          78 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSE-MFGLIQ------AERQDENTPF--------  142 (321)
T ss_dssp             ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGG-GGCSCS------SSSBCTTSCC--------
T ss_pred             cccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchh-hcCccc------CCCCCCCCCc--------
Confidence            9988766554 34445889999999999999999998445677777766 666554      5567777633        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc--ccccccchhhccC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY--VYQTLRDTEEILG  240 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  240 (341)
                        .|.+.|+.+|.++|+++..+. +++++++++||+++|||........+.+...+.+...+...  .++++.+      
T Consensus       143 --~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~------  214 (321)
T d1rpna_         143 --YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDA------  214 (321)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTC------
T ss_pred             --cccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCe------
Confidence              346899999999999999998 66999999999999999755441111223334444444432  3455554      


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCc---ccc---CcCCCCcceEeecchhhhh
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFH---IKQ---EYLDVPKREIKWGGTKLEE  313 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~---~~~---~~~~~~~~~~~~d~~k~~~  313 (341)
                      .++|+|++|+|+++..+++++. .+.||+++ +..|+.++++.+.+..+...   ...   ...+........|++|+++
T Consensus       215 ~r~~i~v~D~~~~~~~~~~~~~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k  293 (321)
T d1rpna_         215 KRDWGFAGDYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQR  293 (321)
T ss_dssp             EEECEEHHHHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHH
T ss_pred             EEccEEeHHHHHHHHHHHhcCC-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHH
Confidence            8999999999999999998764 47899887 56999999999999884321   111   1123455667889999988


Q ss_pred             -cCCcccccHHHHHHHHHHHHHH
Q 019415          314 -KGFEYNYDLKMILDDSIKCGRK  335 (341)
Q Consensus       314 -lg~~~~~~~~~~l~~~~~~~~~  335 (341)
                       |||+|+++++++|+++++|+.+
T Consensus       294 ~lG~~P~~~l~e~i~~tv~~~l~  316 (321)
T d1rpna_         294 VLGWKPRTSLDELIRMMVEADLR  316 (321)
T ss_dssp             HHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             HHCCCcCCCHHHHHHHHHHHHHH
Confidence             9999999999999999999765

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-42  Score=311.72  Aligned_cols=309  Identities=16%  Similarity=0.119  Sum_probs=230.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-------hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-------KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (341)
                      +||||||||||||++|+++|++.||+|++++| ....       ......+....  ...++++.+|++|.+.+.+++.+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN-FHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC-SSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC-CCccccccccchHHHHHHHHhc--CCCcEEEEeeccccccccccccc
Confidence            68999999999999999999999999999864 2111       11222222211  24789999999999999998864


Q ss_pred             --CCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCC
Q 019415           80 --CDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTP  156 (341)
Q Consensus        80 --~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (341)
                        +++|+|+||...... ...+...++.|+.++.++++++++.+ +++|||+||+.+++....      .....+.+   
T Consensus        80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~------~~~~~~~~---  149 (346)
T d1ek6a_          80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQY------LPLDEAHP---  149 (346)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSS------SSBCTTSC---
T ss_pred             cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeecccc------cccccccc---
Confidence              668999999876544 22344789999999999999999999 999999999995553322      11111211   


Q ss_pred             CCCCCccCcchhhhHHHhHHHHHHHHHhhc--cCCceEEEEecCceeCCCCCCC------CCCCchhhhhHhhHhcCc--
Q 019415          157 PDHPLTCHNEYLRVYIESKMKSEKELLSYG--SSGLEVVALALGVVAGDTNLPY------SSTPVSVIGGLCQLTNNE--  226 (341)
Q Consensus       157 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~~~~~~vlRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~--  226 (341)
                             ...+.++|+.+|..+|+.+..+.  ..+++.+++||+.+||+.....      .....+++.+...+....  
T Consensus       150 -------~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (346)
T d1ek6a_         150 -------TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREA  222 (346)
T ss_dssp             -------CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSC
T ss_pred             -------ccccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCc
Confidence                   11346789999999999999987  3599999999999999865422      112234555555554433  


Q ss_pred             -cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--C-CCceEEEecc-ccCHHHHHHHHHHhCCCCccccCc---CC
Q 019415          227 -YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--S-MSGRFFCTNV-FVSSAEIASCLQQNYPEFHIKQEY---LD  298 (341)
Q Consensus       227 -~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~-~~g~~n~~~~-~~s~~e~~~~i~~~~~~~~~~~~~---~~  298 (341)
                       .+++......++.+.|||+|++|+|.++..++...  . ..++||++++ .+|+.|+++.+.+.++. +.+..+   .+
T Consensus       223 i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~-~~~~~~~~~~~  301 (346)
T d1ek6a_         223 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK-KIPYKVVARRE  301 (346)
T ss_dssp             EEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCT
T ss_pred             EEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCC-CCCeEECCCCC
Confidence             23344445566777999999999999998875442  2 2338999884 58999999999999853 233322   24


Q ss_pred             CCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          299 VPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       299 ~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +......+|++|+++ |||+|+++++|+|+++++|++++
T Consensus       302 ~e~~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n  340 (346)
T d1ek6a_         302 GDVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN  340 (346)
T ss_dssp             TCCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             CCCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhC
Confidence            456678899999988 99999999999999999999987

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-42  Score=311.45  Aligned_cols=305  Identities=18%  Similarity=0.209  Sum_probs=222.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHH-HhcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFEN-AIQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~~~d~Vi   84 (341)
                      |||||||||||||++|+++|+++| ++|+++++ ....   ...+..    .++++++++|+++.+.+.+ +++++|+||
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~-~~~~---~~~~~~----~~~~~~i~~Di~~~~~~~~~~~~~~d~Vi   72 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDI-GSDA---ISRFLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVL   72 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEES-CCGG---GGGGTT----CTTEEEEECCTTTCSHHHHHHHHHCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC-CCcc---hhhhcc----CCCeEEEECccCChHHHHHHHHhCCCccc
Confidence            789999999999999999999999 58999987 5432   111211    2589999999988755544 677899999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... .......+..|+.++.+++++|.+.+  .+++|.||..++++. .      .....|.........   
T Consensus        73 h~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~~~-~------~~~~~~~~~~~~~~~---  140 (342)
T d2blla1          73 PLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMC-S------DKYFDEDHSNLIVGP---  140 (342)
T ss_dssp             ECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTC-C------CSSBCTTTCCCBCCC---
T ss_pred             cccccccccccccCCcccccccccccccccccccccc--ccccccccccccccc-c------ccccccccccccccc---
Confidence            9999877654 33345789999999999999999988  567788888855533 2      233333322211111   


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCC----CCCchhhhhHhhHhcCc--cccccccchh
Q 019415          164 HNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYS----STPVSVIGGLCQLTNNE--YVYQTLRDTE  236 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~  236 (341)
                      ...|.+.|+.||.++|++++.+. +.|++++++|++.+||+......    ........++..+..+.  ..++++.+  
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~--  218 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ--  218 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCC--
T ss_pred             cCCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCe--
Confidence            23567899999999999999998 56999999999999998655431    11223455555554444  33455555  


Q ss_pred             hccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEec-cc-cCHHHHHHHHHHhCCCCccccCcC--------------
Q 019415          237 EILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTN-VF-VSSAEIASCLQQNYPEFHIKQEYL--------------  297 (341)
Q Consensus       237 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~-~~-~s~~e~~~~i~~~~~~~~~~~~~~--------------  297 (341)
                          .++|+|++|+|+++..+++++.  ..| +||+++ +. +|+.|+++.+.+.++.........              
T Consensus       219 ----~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (342)
T d2blla1         219 ----KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYY  294 (342)
T ss_dssp             ----EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------
T ss_pred             ----eeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceecccccc
Confidence                9999999999999999998743  334 999975 33 799999999998763221111100              


Q ss_pred             ---CCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHcC
Q 019415          298 ---DVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKSG  337 (341)
Q Consensus       298 ---~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~~  337 (341)
                         .......++|++|+++ |||+|+++++++|+++++|++++.
T Consensus       295 ~~~~~~~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~  338 (342)
T d2blla1         295 GKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTV  338 (342)
T ss_dssp             ------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred             ccccccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCc
Confidence               1123345679999988 999999999999999999998764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-42  Score=311.46  Aligned_cols=302  Identities=14%  Similarity=0.070  Sum_probs=222.9

Q ss_pred             cEE-EEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc--hhhhhHhhhCC--CCCCceEEEecCCCChHHHHHHhc--C
Q 019415            7 FKV-CVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED--KSKVDLLKSLP--GAETRLIFFEAEIYDPDTFENAIQ--G   79 (341)
Q Consensus         7 ~~i-lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~--~   79 (341)
                      ||| ||||||||||++|+++|+++||+|++++| ..+.  ...++.+....  ....+++++.+|++|++.+..++.  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVR-RSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEEC-CCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcc
Confidence            477 99999999999999999999999999999 6543  12223222211  123578999999999999999986  5


Q ss_pred             CCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTP  156 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~  156 (341)
                      +++|+|+|+...... ..+...++++|+.++.+++++|++.+  +.++|||+||++ +||...      ..+++|+++. 
T Consensus        80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~-vyg~~~------~~~~~E~~~~-  151 (347)
T d1t2aa_          80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE-LYGKVQ------EIPQKETTPF-  151 (347)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GTCSCS------SSSBCTTSCC-
T ss_pred             cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh-eecCCC------CCCCCCCCCC-
Confidence            789999999766543 33445778999999999999999986  235899999988 565444      5688888743 


Q ss_pred             CCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--ccccccc
Q 019415          157 PDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLR  233 (341)
Q Consensus       157 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  233 (341)
                               .|.++|+.||.++|++++.+. +++++++++||+++|||........+.+...+.....+..  ..++++.
T Consensus       152 ---------~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~  222 (347)
T d1t2aa_         152 ---------YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLD  222 (347)
T ss_dssp             ---------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTT
T ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCc
Confidence                     346899999999999999987 5699999999999999965543111122333334443333  3344444


Q ss_pred             chhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccC-----------------
Q 019415          234 DTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQE-----------------  295 (341)
Q Consensus       234 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~-----------------  295 (341)
                      +      .++|+|++|+|+++..++++.. .+.|+++. ...++.+....+....+.......                 
T Consensus       223 ~------~r~~i~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
T d1t2aa_         223 A------KRDWGHAKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHV  295 (347)
T ss_dssp             C------EECCEEHHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEE
T ss_pred             c------eeeeeEecHHHHHHHHHhhcCC-CccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCcee
Confidence            4      8999999999999999998754 35677766 568999999988877643211000                 


Q ss_pred             ------cCCCCcceEeecchhhhh-cCCcccccHHHHHHHHHHHH
Q 019415          296 ------YLDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCG  333 (341)
Q Consensus       296 ------~~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~  333 (341)
                            ..+.....+.+|++|+++ |||+|+++++++|+++++|.
T Consensus       296 ~~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~  340 (347)
T d1t2aa_         296 TVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHAD  340 (347)
T ss_dssp             EECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             eecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence                  012233455679999988 99999999999999998654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.2e-42  Score=310.87  Aligned_cols=311  Identities=14%  Similarity=0.113  Sum_probs=228.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      |.|||||||||||++|++.|+++|++|++++| -... ..........  ...+++++.+|++|.+.+++++.  ++|+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~-~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   78 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN-LSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEYKIDSV   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC-CCCcchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhccCCCEE
Confidence            46999999999999999999999999999876 3222 1112222221  12478999999999999999887  79999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCC-CCCCCCCCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKE-DGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~-~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      ||+||...... .........+|+.++.+++++|++.+ +++|||+||.++++.... ..    ..+++|+.+       
T Consensus        79 ihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~----~~~~~e~~~-------  146 (347)
T d1z45a2          79 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPN----MIPIPEECP-------  146 (347)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTT----CCSBCTTSC-------
T ss_pred             EEccccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCC----CCccccccC-------
Confidence            99999876443 33345788999999999999999998 999999999995553221 11    345666552       


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc---cCCceEEEEecCceeCCCCCCC------CCCCchhhhhHhhHhcCc---ccc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG---SSGLEVVALALGVVAGDTNLPY------SSTPVSVIGGLCQLTNNE---YVY  229 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~vlRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~---~~~  229 (341)
                         ..|.+.|+.+|.++|++++.+.   ..+++++++||+++||+.....      .....+++.+.....+..   ..+
T Consensus       147 ---~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~  223 (347)
T d1z45a2         147 ---LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIF  223 (347)
T ss_dssp             ---CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC
T ss_pred             ---CCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEe
Confidence               2346899999999999999885   3489999999999999754332      112234555555554333   345


Q ss_pred             ccccchhhccCCCCcccHHHHHHHHHHhhcCC------C-CCceEEEec-cccCHHHHHHHHHHhCCCCccccCcC---C
Q 019415          230 QTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP------S-MSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEYL---D  298 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~------~-~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~---~  298 (341)
                      +++.+..++...+|++++.|++.++..+++..      . ..++||+++ ..+|+.|+++.+.+.++. +++....   +
T Consensus       224 g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~  302 (347)
T d1z45a2         224 GDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-DLPYKVTGRRA  302 (347)
T ss_dssp             ------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC-CCCC-------
T ss_pred             CCCccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCC-CCceEeCCCCC
Confidence            66666667777899999999999998877531      1 234899987 469999999999998842 3333221   3


Q ss_pred             CCcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          299 VPKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       299 ~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +......+|++|+++ |||+|+++++++|+++++|++++
T Consensus       303 ~~~~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~n  341 (347)
T d1z45a2         303 GDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN  341 (347)
T ss_dssp             --CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred             CCCCEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence            345566789999988 99999999999999999999987

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=7.4e-42  Score=303.36  Aligned_cols=288  Identities=16%  Similarity=0.125  Sum_probs=217.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      +|||||||||||||++|+++|+++|+.|+++.+ ..                      ..|+.+.+.+.++++  ++|+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~-~~----------------------~~~~~~~~~~~~~~~~~~~d~v   58 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT-RD----------------------ELNLLDSRAVHDFFASERIDQV   58 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCC-TT----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecC-ch----------------------hccccCHHHHHHHHhhcCCCEE
Confidence            579999999999999999999999999987544 21                      258899999988886  58999


Q ss_pred             EEeccCCcccc--chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHID--GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        84 i~~a~~~~~~~--~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      +|+|+......  ..+..+.++.|+.++.+++++|.+.+ +++|||+||.++ |+...      ..+++|+.......  
T Consensus        59 ~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~v-yg~~~------~~~~~E~~~~~~~~--  128 (315)
T d1e6ua_          59 YLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCI-YPKLA------KQPMAESELLQGTL--  128 (315)
T ss_dssp             EECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGG-SCTTC------CSSBCGGGTTSSCC--
T ss_pred             EEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceE-cCCCC------CCCccCCccccCCC--
Confidence            99998766533  33345778899999999999999998 999999999995 44433      45677765333211  


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhH-----hhHhcCc--ccccccc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGL-----CQLTNNE--YVYQTLR  233 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~  233 (341)
                         ..+.++|+.+|.++|++++.+. +.|++++++||++||||++............+.     .......  ...+++ 
T Consensus       129 ---~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g-  204 (315)
T d1e6ua_         129 ---EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG-  204 (315)
T ss_dssp             ---CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS-
T ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCC-
Confidence               1345789999999999999998 669999999999999998765422222222221     2222222  223333 


Q ss_pred             chhhccCCCCcccHHHHHHHHHHhhcCCC---------CCceEEEec-cccCHHHHHHHHHHhCCCCccccC---cCCCC
Q 019415          234 DTEEILGKLPLVHIDDVCEAHIFCMEKPS---------MSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQE---YLDVP  300 (341)
Q Consensus       234 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---------~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~---~~~~~  300 (341)
                           ...++++|++|++.++..++.+..         ..+.+|++. ...++.++++.+.+..+.. ....   ..++.
T Consensus       205 -----~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~-~~i~~~~~~~~~  278 (315)
T d1e6ua_         205 -----TPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK-GRVVFDASKPDG  278 (315)
T ss_dssp             -----CCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCC-SEEEEETTSCCC
T ss_pred             -----ceEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCC-cceEECCCCCCC
Confidence                 338999999999999999886532         223788876 4589999999999987432 2221   12344


Q ss_pred             cceEeecchhhhhcCCcccccHHHHHHHHHHHHHHc
Q 019415          301 KREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       301 ~~~~~~d~~k~~~lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .....+|++|+++|||+|+++++++|+++++|++++
T Consensus       279 ~~~~~~d~sk~k~Lg~~p~~~l~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         279 TPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLEN  314 (315)
T ss_dssp             CSBCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred             CceeccCHHHHHHcCCCCCCCHHHHHHHHHHHHHHc
Confidence            455678999998899999999999999999999876

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.8e-42  Score=306.21  Aligned_cols=306  Identities=14%  Similarity=0.051  Sum_probs=225.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc--hhhhhHhhhCC--CCCCceEEEecCCCChHHHHHHhc--C
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED--KSKVDLLKSLP--GAETRLIFFEAEIYDPDTFENAIQ--G   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~--~   79 (341)
                      +|++||||||||||+||++.|+++||+|++++| ..+.  ..+...+...+  .....++++.+|+++.+.+.+.++  +
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~   79 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIR-RSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK   79 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-CCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEEC-CCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhc
Confidence            379999999999999999999999999999999 5432  12222222111  113468899999999999998885  6


Q ss_pred             CCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcC----CcCEEEEecccccccCCCCCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSG----TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCY  154 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~  154 (341)
                      +|+|||+|+...... .+.+...+..|+.++.++++++++..    ...++++.||+. +++..       ..+++|+++
T Consensus        80 ~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~-~~~~~-------~~~~~E~~~  151 (339)
T d1n7ha_          80 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGST-------PPPQSETTP  151 (339)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTTS-------CSSBCTTSC
T ss_pred             cchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccce-ecccC-------CCCCCCCCC
Confidence            899999999877654 33445889999999999999987643    134677777776 44322       356788774


Q ss_pred             CCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--ccccc
Q 019415          155 TPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQT  231 (341)
Q Consensus       155 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  231 (341)
                      .          .|.+.|+.+|..+|.++..+. .++++++++||++||||........+.+...+.....+..  ...++
T Consensus       152 ~----------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~  221 (339)
T d1n7ha_         152 F----------HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGN  221 (339)
T ss_dssp             C----------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESC
T ss_pred             C----------CCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCC
Confidence            3          347899999999999999998 5699999999999999975543111112222223333332  33344


Q ss_pred             ccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHHhCCCCc---cc---cCcCCCCcceEe
Q 019415          232 LRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTNVFVSSAEIASCLQQNYPEFH---IK---QEYLDVPKREIK  305 (341)
Q Consensus       232 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~~~s~~e~~~~i~~~~~~~~---~~---~~~~~~~~~~~~  305 (341)
                      +.+      .++|+|++|+|+++..++.++...+.++..+...++.++++.+.+.++...   +.   ....+.....+.
T Consensus       222 ~~~------~rd~~~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  295 (339)
T d1n7ha_         222 LQA------SRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQ  295 (339)
T ss_dssp             TTC------EEECEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCC
T ss_pred             CCc------cccceeeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeee
Confidence            444      999999999999999999987655555556677999999999999985321   11   112244556677


Q ss_pred             ecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          306 WGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       306 ~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      .|++|+++ |||+|+++++++|+++++|+.+.
T Consensus       296 ~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~~  327 (339)
T d1n7ha_         296 GDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL  327 (339)
T ss_dssp             BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred             ECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence            89999988 99999999999999999998653

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.1e-42  Score=315.08  Aligned_cols=313  Identities=18%  Similarity=0.152  Sum_probs=221.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc------------------hhhhhHhhhCCCCCCceEEEecCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED------------------KSKVDLLKSLPGAETRLIFFEAEI   67 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~Dl   67 (341)
                      +|||||||||||||++|+++|++.||+|++++-  ..+                  ..........  ..++++++.+|+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDn--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~Dl   76 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN--LVRRLFDHQLGLESLTPIASIHDRISRWKAL--TGKSIELYVGDI   76 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC--CHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH--HCCCCEEEESCT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEec--CCcccccccccccccccccchHHHHHHHHhh--cCCCcEEEEccC
Confidence            589999999999999999999999999999741  111                  0011111111  124789999999


Q ss_pred             CChHHHHHHhc--CCCEEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCC
Q 019415           68 YDPDTFENAIQ--GCDFVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        68 ~~~~~~~~~~~--~~d~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                      +|.+.+.++++  ++|+|||+||......    .......+.+|+.++.+++++|++.+..++|++.||.. +|+...  
T Consensus        77 ~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~-~~~~~~--  153 (393)
T d1i24a_          77 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG-EYGTPN--  153 (393)
T ss_dssp             TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGG-GGCCCS--
T ss_pred             CCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccc-cccccc--
Confidence            99999999997  5799999999765432    22234678999999999999999998344566666665 554322  


Q ss_pred             CCCCCCCCCCCCCC----CCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCC-------
Q 019415          142 SAGYKDSIDETCYT----PPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYS-------  209 (341)
Q Consensus       142 ~~~~~~~~~E~~~~----~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~-------  209 (341)
                           .+..|....    ......+.+..|.+.|+.+|..+|.++..+. +.+++++++||+++||++.....       
T Consensus       154 -----~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~  228 (393)
T d1i24a_         154 -----IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN  228 (393)
T ss_dssp             -----SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred             -----cccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccc
Confidence                 111111100    0000011123567899999999999999988 66999999999999999765321       


Q ss_pred             ------CCCchhhhhHhhHhcCc--cccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCceEE---EeccccCHHH
Q 019415          210 ------STPVSVIGGLCQLTNNE--YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFF---CTNVFVSSAE  278 (341)
Q Consensus       210 ------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n---~~~~~~s~~e  278 (341)
                            ....++..++.....+.  .+++++.+      .|||+|++|+++++..++++....|.|+   .+++.+|+.|
T Consensus       229 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~------~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~e  302 (393)
T d1i24a_         229 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQ------TRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNE  302 (393)
T ss_dssp             CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCC------EEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHH
T ss_pred             ccccccccccchhhhhHHhhcCCeeEEeeeccc------ccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHH
Confidence                  11223555555554444  33455555      8999999999999999999877777443   3445689999


Q ss_pred             HHHHHHHhCCCC--cccc-----CcCCCCcceEeecchhhhhcCCcccccHHHHHHHHHHHHHHc
Q 019415          279 IASCLQQNYPEF--HIKQ-----EYLDVPKREIKWGGTKLEEKGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       279 ~~~~i~~~~~~~--~~~~-----~~~~~~~~~~~~d~~k~~~lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +++++.+..+..  .++.     ...+.....+..|++|+++|||+|+++++++++++++|+++.
T Consensus       303 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~LGw~P~~~~~~~i~~~~~~~~~~  367 (393)
T d1i24a_         303 LASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQF  367 (393)
T ss_dssp             HHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhCCCcceeeccCCCCCCCccEecCCHHHHHHcCCccccCHHHHHHHHHHHHHHH
Confidence            999998865321  1111     112345556778999998899999999999999999998775

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=2.5e-41  Score=307.98  Aligned_cols=320  Identities=17%  Similarity=0.135  Sum_probs=230.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHH-CCCeEEEEecC--CC------Cchh-hhhHhhhC-----CCCCCceEEEecCCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLD-KGYIVHTTLRP--NL------EDKS-KVDLLKSL-----PGAETRLIFFEAEIYD   69 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~--~~------~~~~-~~~~~~~~-----~~~~~~~~~~~~Dl~~   69 (341)
                      +.||||||||+||||++|+++|++ .||+|+++++.  ..      .... ....+...     ......+.++.+|++|
T Consensus         1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (383)
T d1gy8a_           1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (383)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence            358999999999999999999986 68999998630  11      1111 11111111     1123468899999999


Q ss_pred             hHHHHHHhc---CCCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCC
Q 019415           70 PDTFENAIQ---GCDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        70 ~~~~~~~~~---~~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                      ++.+.++++   ++|+|||+|+...... .......++.|+.++.++++++++.+ +++++++||..+++..........
T Consensus        81 ~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~  159 (383)
T d1gy8a_          81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTN  159 (383)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----C
T ss_pred             HHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccccccccccccccccccccccc
Confidence            999999886   5799999999876654 33345788999999999999999998 999999999985543322110111


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCC-----CchhhhhH
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSST-----PVSVIGGL  219 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~-----~~~~~~~~  219 (341)
                      ..++.|++.          ..|.+.|+.+|..+|++++.+. .+|++++++||+++||+........     ...++.++
T Consensus       160 ~~~~~e~~~----------~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii  229 (383)
T d1gy8a_         160 AEPIDINAK----------KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIIL  229 (383)
T ss_dssp             CCCBCTTSC----------CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHH
T ss_pred             ccccccccC----------CCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHH
Confidence            223444442          3457999999999999999998 5699999999999999987654111     12233333


Q ss_pred             hhHhc-----------------Cc-cccccccchhhccCCCCcccHHHHHHHHHHhhcCC---------CCCceEEEec-
Q 019415          220 CQLTN-----------------NE-YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP---------SMSGRFFCTN-  271 (341)
Q Consensus       220 ~~~~~-----------------~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---------~~~g~~n~~~-  271 (341)
                      ..+..                 .. ..++.....++|.+.|+|+|++|+|+++..+++..         ...++||+++ 
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~  309 (383)
T d1gy8a_         230 GRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS  309 (383)
T ss_dssp             HHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS
T ss_pred             HHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCC
Confidence            32221                 11 23444445566777899999999999999988531         1123899987 


Q ss_pred             cccCHHHHHHHHHHhCCCCccccCc---CCCCcceEeecchhhhh-cCCcccccHHHHHHHH-HHHHHHc
Q 019415          272 VFVSSAEIASCLQQNYPEFHIKQEY---LDVPKREIKWGGTKLEE-KGFEYNYDLKMILDDS-IKCGRKS  336 (341)
Q Consensus       272 ~~~s~~e~~~~i~~~~~~~~~~~~~---~~~~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~-~~~~~~~  336 (341)
                      ..+|+.|+++.+.+..+. +++...   .++.......|++|+++ |||+|+++++|+|+++ ++|++++
T Consensus       310 ~~~s~~el~~~i~~~~~~-~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         310 RGYSVREVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             CCEEHHHHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             CceeHHHHHHHHHHHhCC-CCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            469999999999998753 222221   23456678889999988 9999999999999987 5898887

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=2.3e-41  Score=303.64  Aligned_cols=314  Identities=20%  Similarity=0.231  Sum_probs=232.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++||||||+||||++|+++|+++||+|++++| +.++..................++.+|+.|.+.+.+++.++|+|+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~   88 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR-SASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeC-CchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence            4689999999999999999999999999999999 876544444433333333455668899999999999999999999


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCC-CCCCCCCCCC------
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKD-SIDETCYTPP------  157 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~-~~~E~~~~~~------  157 (341)
                      |+|+.......  ...++..|+.++.+++++|.+.+.+++|||+||+.+++...+..    .. ..+|..+...      
T Consensus        89 ~~a~~~~~~~~--~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~----~~~~~~e~~~~~~~~~~~~  162 (342)
T d1y1pa1          89 HIASVVSFSNK--YDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNV----EGIYLDEKSWNLESIDKAK  162 (342)
T ss_dssp             ECCCCCSCCSC--HHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTC----CCCEECTTCCCHHHHHHHH
T ss_pred             hhccccccccc--ccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCC----CCccccccccccccccccc
Confidence            99998775432  44778899999999999999985599999999987655433322    22 2233322100      


Q ss_pred             CCCCccCcchhhhHHHhHHHHHHHHHhhc-cC--CceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-ccccccc
Q 019415          158 DHPLTCHNEYLRVYIESKMKSEKELLSYG-SS--GLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLR  233 (341)
Q Consensus       158 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~--~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  233 (341)
                      .........|.++|+.+|..+|++++.|. ++  +++++++||+.+|||...... ....+..++..+..+. .......
T Consensus       163 ~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~-~~~~~~~~~~~l~~g~~~~~~~~~  241 (342)
T d1y1pa1         163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPET-QSGSTSGWMMSLFNGEVSPALALM  241 (342)
T ss_dssp             HSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTT-CCCHHHHHHHHHHTTCCCHHHHTC
T ss_pred             cccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccc-cccchHHHHHHHHcCCcCcccCCc
Confidence            00011134567899999999999999887 32  688999999999999655431 1224555555555544 3333333


Q ss_pred             chhhccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccCcCCCCcceEeecc----
Q 019415          234 DTEEILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQEYLDVPKREIKWGG----  308 (341)
Q Consensus       234 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~----  308 (341)
                      +      .++|+|++|+|++++.+++++...|.||+++ +.+|+.|+++++++.+|...++............++.    
T Consensus       242 ~------~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~  315 (342)
T d1y1pa1         242 P------PQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSL  315 (342)
T ss_dssp             C------SEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHH
T ss_pred             c------ceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCccCcccccccchHHH
Confidence            3      7899999999999999999888888777665 6799999999999999887777665544333444444    


Q ss_pred             hhhhhcCCcccccHHHHHHHHHHH
Q 019415          309 TKLEEKGFEYNYDLKMILDDSIKC  332 (341)
Q Consensus       309 ~k~~~lg~~~~~~~~~~l~~~~~~  332 (341)
                      .+++.|||.+.++++++|+++++.
T Consensus       316 ~~~k~lg~~~~~~lee~i~d~I~s  339 (342)
T d1y1pa1         316 EILKSLGRPGWRSIEESIKDLVGS  339 (342)
T ss_dssp             HHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred             HHHHHcCCCCCcCHHHHHHHHHHh
Confidence            334559999988999999999863

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=4.8e-40  Score=294.07  Aligned_cols=310  Identities=17%  Similarity=0.095  Sum_probs=225.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC--CCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG--CDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~d~Vi~   85 (341)
                      ||||||||||||++|+++|+++||+|++++| - .+....+.+..+.. .++++++.+|+++.+.+.+++++  +|+|||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~-~-~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih   78 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDN-L-SRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   78 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-C-CSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEEC-C-CcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhcCCceEEe
Confidence            7999999999999999999999999999764 2 22233333332211 24899999999999999999975  699999


Q ss_pred             eccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCC------CCCC
Q 019415           86 VATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCY------TPPD  158 (341)
Q Consensus        86 ~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~------~~~~  158 (341)
                      +|+...... .......+++|+.|+.+|+++|.+.+ ++++|++||..++++....      .+..+.+.      .+..
T Consensus        79 ~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~------~~~~~~~~~~~~~~~~~~  151 (338)
T d1orra_          79 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQ------YKYNETETRYTCVDKPNG  151 (338)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTT------SCEEECSSCEEETTCTTC
T ss_pred             ecccccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccc------cccccccccccccccccC
Confidence            999877654 33345889999999999999999998 8888888887767755431      11111110      0000


Q ss_pred             CCCccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc-----Cc--cccc
Q 019415          159 HPLTCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN-----NE--YVYQ  230 (341)
Q Consensus       159 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~  230 (341)
                      ........+.+.|+.+|...|.++..+. .++....++|++.+|++...... ....+..++..+..     +.  ..++
T Consensus       152 ~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g  230 (338)
T d1orra_         152 YDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY-DQGWVGWFCQKAVEIKNGINKPFTISG  230 (338)
T ss_dssp             BCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT-TBCHHHHHHHHHHHHHTTCCCCEEEES
T ss_pred             cccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccc-cccccchhhHHHHHHHhccCCceEEeC
Confidence            0011123467999999999999999887 56999999999999987655431 22334445444322     11  2334


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCCC-CC-ceEEEec---cccCHHHHHHHHHHhCCCCccccC---cCCCCcc
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS-MS-GRFFCTN---VFVSSAEIASCLQQNYPEFHIKQE---YLDVPKR  302 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~-g~~n~~~---~~~s~~e~~~~i~~~~~~~~~~~~---~~~~~~~  302 (341)
                      ++.+      .++|+|++|+++++..++++.. .. .+||+..   ..+++.|+++.+.+..+. ..+..   ..+....
T Consensus       231 ~g~~------~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~  303 (338)
T d1orra_         231 NGKQ------VRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI-DMRFTNLPVRESDQR  303 (338)
T ss_dssp             SSCC------EEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC-CCCEEEECCCSSCCS
T ss_pred             CCce------eEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCC-CceeEeCCCCCCCcC
Confidence            4444      8999999999999999997643 33 4888843   248999999999998743 22222   2234556


Q ss_pred             eEeecchhhhh-cCCcccccHHHHHHHHHHHHHH
Q 019415          303 EIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRK  335 (341)
Q Consensus       303 ~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~  335 (341)
                      .+.+|++|+++ |||+|+++++++|+++++|++.
T Consensus       304 ~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         304 VFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             EECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             eeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence            67889999988 9999999999999999999986

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=1.6e-38  Score=286.38  Aligned_cols=302  Identities=17%  Similarity=0.100  Sum_probs=223.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      ++|||||||||||||++|++.|++.||+|++++| +............   ..+.++++.+|++|++.+.++++  .+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r-~~~~~~~~~~~~~---~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~   82 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSL-TAPTVPSLFETAR---VADGMQSEIGDIRDQNKLLESIREFQPEI   82 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCSSSSCHHHHTT---TTTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CCCccHHHHhhhh---cccCCeEEEeeccChHhhhhhhhhchhhh
Confidence            5799999999999999999999999999999999 6654332211111   22479999999999999999886  5799


Q ss_pred             EEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        83 Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      |+|+|+...... .+.....+.+|+.++.++++++++.+....+++.||.. ++.....     ..+.+|+++       
T Consensus        83 v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~-~~~~~~~-----~~~~~~~~~-------  149 (356)
T d1rkxa_          83 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDK-CYDNKEW-----IWGYRENEA-------  149 (356)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGG-GBCCCCS-----SSCBCTTSC-------
T ss_pred             hhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccc-ccccccc-----ccccccccc-------
Confidence            999999876544 34456889999999999999999987345555555554 4433321     345555542       


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc----------cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccc
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG----------SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQ  230 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~----------~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  230 (341)
                         ..|.++|+.+|..+|..+..+.          ..++.++++||+++|||++...   ..+++.+++.+.... ...+
T Consensus       150 ---~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~---~~~i~~~~~~~~~~~~~~~~  223 (356)
T d1rkxa_         150 ---MGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL---DRIVPDILRAFEQSQPVIIR  223 (356)
T ss_dssp             ---BCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS---SCHHHHHHHHHHTTCCEECS
T ss_pred             ---cCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh---hHHHHHHHHHHhCCCceEEe
Confidence               2347899999999998887654          2368999999999999976443   346677777776655 4444


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-----eEEE--ec-cccCHHHHHHHHHHhCCCC-ccc--cCcCCC
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-----RFFC--TN-VFVSSAEIASCLQQNYPEF-HIK--QEYLDV  299 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-----~~n~--~~-~~~s~~e~~~~i~~~~~~~-~~~--~~~~~~  299 (341)
                      .+.+      .++++|++|++.++..++.+....+     ..+.  +. ...++.++++.+.+.++.. .+.  ....+.
T Consensus       224 ~~~~------~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  297 (356)
T d1rkxa_         224 NPHA------IRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPH  297 (356)
T ss_dssp             CTTC------EECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------
T ss_pred             eccc------cccccccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCC
Confidence            4444      8999999999999999887643222     2333  23 3479999999999988422 111  112234


Q ss_pred             CcceEeecchhhhh-cCCcccccHHHHHHHHHHHHHH
Q 019415          300 PKREIKWGGTKLEE-KGFEYNYDLKMILDDSIKCGRK  335 (341)
Q Consensus       300 ~~~~~~~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~  335 (341)
                      ....+.+|++|+++ |||+|+++++++|+++++|++.
T Consensus       298 ~~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~  334 (356)
T d1rkxa_         298 EAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKN  334 (356)
T ss_dssp             CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred             CcCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence            55667899999988 9999999999999999999986

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=2.5e-36  Score=263.01  Aligned_cols=267  Identities=15%  Similarity=0.064  Sum_probs=210.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      |||||||||||||++|+++|.++||+|++++| +.                       +|+.|.+.++++++  ++|+||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r-~~-----------------------~D~~d~~~~~~~l~~~~~d~vi   57 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDV-QD-----------------------LDITNVLAVNKFFNEKKPNVVI   57 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECT-TT-----------------------CCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeec-hh-----------------------ccCCCHHHHHHHHHHcCCCEEE
Confidence            89999999999999999999999999999988 32                       48999999999987  689999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      |+|+...... ....+.....|+....++.+.+...+  ..+++.||..+ ++...      ..+..|.+..        
T Consensus        58 h~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v-~~~~~------~~~~~e~~~~--------  120 (281)
T d1vl0a_          58 NCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYV-FDGEA------KEPITEFDEV--------  120 (281)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGG-SCSCC------SSCBCTTSCC--------
T ss_pred             eeccccccccccccchhhccccccccccccccccccc--cccccccccee-eeccc------cccccccccc--------
Confidence            9999877654 34445778889999999999998876  78888888874 43333      4667777733        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                        .+...|+.+|..+|+.++.+   +.+++++||+++||++..       +...++..+..........++      .++
T Consensus       121 --~~~~~~~~~k~~~e~~~~~~---~~~~~i~R~~~vyG~~~~-------~~~~~~~~~~~~~~~~~~~~~------~~~  182 (281)
T d1vl0a_         121 --NPQSAYGKTKLEGENFVKAL---NPKYYIVRTAWLYGDGNN-------FVKTMINLGKTHDELKVVHDQ------VGT  182 (281)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHH---CSSEEEEEECSEESSSSC-------HHHHHHHHHHHCSEEEEESSC------EEC
T ss_pred             --cchhhhhhhhhHHHHHHHHh---CCCccccceeEEeCCCcc-------cccchhhhhccCCceeecCCc------eec
Confidence              34688999999999998865   479999999999999643       355666666555533333344      899


Q ss_pred             cccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCC----ccccCcCCC---CcceEeecchhhhh-c
Q 019415          244 LVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEF----HIKQEYLDV---PKREIKWGGTKLEE-K  314 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~----~~~~~~~~~---~~~~~~~d~~k~~~-l  314 (341)
                      ++|++|+++++..++++.. .|.||+++ +.+|+.|+++.+++.++..    +++....+.   .+.+..+|++|+++ |
T Consensus       183 ~i~v~D~~~~~~~~~~~~~-~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~  261 (281)
T d1vl0a_         183 PTSTVDLARVVLKVIDEKN-YGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTT  261 (281)
T ss_dssp             CEEHHHHHHHHHHHHHHTC-CEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTT
T ss_pred             cchhhhhhhhhhhhhhhcc-cCceeEeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHh
Confidence            9999999999999998654 57999877 5699999999999998422    122111111   12345689999988 9


Q ss_pred             CCcccccHHHHHHHHHHHHH
Q 019415          315 GFEYNYDLKMILDDSIKCGR  334 (341)
Q Consensus       315 g~~~~~~~~~~l~~~~~~~~  334 (341)
                      ||+|+ +|+++|++++++++
T Consensus       262 g~~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         262 GDITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             CCCCC-BHHHHHHHHHHHHT
T ss_pred             CCCCC-CHHHHHHHHHHHhc
Confidence            99999 99999999999986

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.1e-35  Score=256.97  Aligned_cols=287  Identities=20%  Similarity=0.160  Sum_probs=193.9

Q ss_pred             EEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHH-HH-----hcCCC
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFE-NA-----IQGCD   81 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~-----~~~~d   81 (341)
                      ||||||+||||++|+++|+++|+ +|+++++  ..+..+...+...         ...|..+.+.+. ..     +..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN--LKDGTKFVNLVDL---------NIADYMDKEDFLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEEC--CSSGGGGHHHHTS---------CCSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEEC--CCCcchhhccccc---------chhhhccchHHHHHHhhhhcccchh
Confidence            89999999999999999999995 7888754  3332333333321         111222222222 22     23689


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      +|+|+|+....... +.+.....|+.++.+++++++..+ ++ +|+.||..++++...       ....|++.       
T Consensus        71 ~i~~~aa~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-i~-~v~~ss~~~~~~~~~-------~~~~~~~~-------  133 (307)
T d1eq2a_          71 AIFHEGACSSTTEW-DGKYMMDNNYQYSKELLHYCLERE-IP-FLYASSAATYGGRTS-------DFIESREY-------  133 (307)
T ss_dssp             EEEECCSCCCTTCC-CHHHHHHHTHHHHHHHHHHHHHHT-CC-EEEEEEGGGGTTCCS-------CBCSSGGG-------
T ss_pred             hhhhhccccccccc-cccccccccccccccccccccccc-cc-ccccccccccccccc-------cccccccc-------
Confidence            99999986655433 345788999999999999999998 65 667777665554322       23333332       


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhc-cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cc--cccccchhh
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYG-SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YV--YQTLRDTEE  237 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~-~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~  237 (341)
                         ..+.+.|+.+|..+|..++.+. +.+++++++||+++|||..............+.+.+..+. ..  .+...    
T Consensus       134 ---~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----  206 (307)
T d1eq2a_         134 ---EKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN----  206 (307)
T ss_dssp             ---CCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC----------------
T ss_pred             ---cccccccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccc----
Confidence               2346899999999999999998 6799999999999999977654223344556666666554 22  23333    


Q ss_pred             ccCCCCcccHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHHhCCCCccccC-----cCCCCcceEeecchhh
Q 019415          238 ILGKLPLVHIDDVCEAHIFCMEKPSMSGRFFCTN-VFVSSAEIASCLQQNYPEFHIKQE-----YLDVPKREIKWGGTKL  311 (341)
Q Consensus       238 ~~~~~~~i~v~D~a~~~~~~~~~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~d~~k~  311 (341)
                        ..++|+|++|++.++..++.+. ..+.||+++ ...|+.|+++++.+..+...+...     ...........|++|+
T Consensus       207 --~~r~~~~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~d~~k~  283 (307)
T d1eq2a_         207 --FKRDFVYVGDVADVNLWFLENG-VSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNL  283 (307)
T ss_dssp             ---CBCEEEHHHHHHHHHHHHHHC-CCEEEEESCSCCBCHHHHHHHC---------------------CCCSCCBCCHHH
T ss_pred             --eeeeeeecccHHHHHHHHhhhc-cccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCCCCceeeecCHHHH
Confidence              3899999999999999999864 357899977 569999999999887653333221     1112333345699999


Q ss_pred             hh-cCCcccccHHHHHHHHHHHH
Q 019415          312 EE-KGFEYNYDLKMILDDSIKCG  333 (341)
Q Consensus       312 ~~-lg~~~~~~~~~~l~~~~~~~  333 (341)
                      ++ +||+|.++++++|+++++|+
T Consensus       284 ~~~~~~~p~~sl~egi~~~i~w~  306 (307)
T d1eq2a_         284 RAAGYDKPFKTVAEGVTEYMAWL  306 (307)
T ss_dssp             HHTTCCCCCCCHHHHHHHHHHHT
T ss_pred             HHHHCCCCCCCHHHHHHHHHHhC
Confidence            88 89999999999999999995

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=100.00  E-value=4.7e-34  Score=250.29  Aligned_cols=274  Identities=11%  Similarity=0.053  Sum_probs=201.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi   84 (341)
                      |||||||||||||++|++.|.+.|+.|.+ .+ +..                   .+.+|++|++.++++++  ++|+||
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~~-~~-~~~-------------------~~~~Dl~~~~~~~~~i~~~~~D~Vi   59 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIAL-DV-HSK-------------------EFCGDFSNPKGVAETVRKLRPDVIV   59 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEEE-CT-TCS-------------------SSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEE-EC-CCc-------------------cccCcCCCHHHHHHHHHHcCCCEEE
Confidence            78999999999999999999999875554 44 321                   14589999999999987  579999


Q ss_pred             EeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           85 HVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        85 ~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||||...... .......+..|+.++.++++++++.+  .+++++||+.++++ ..      ..+++|.+..        
T Consensus        60 h~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~-~~------~~~~~E~~~~--------  122 (298)
T d1n2sa_          60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPG-TG------DIPWQETDAT--------  122 (298)
T ss_dssp             ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCC-CT------TCCBCTTSCC--------
T ss_pred             EecccccccccccCccccccccccccccchhhhhccc--cccccccccccccC-CC------CCCCcccccc--------
Confidence            9999876543 44455789999999999999999987  67999999885553 33      5678887733        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                        .|.+.|+.+|..+|..++.+.   ....++|++..++.....      ....+.+.+...........+      .++
T Consensus       123 --~p~~~y~~~k~~~e~~~~~~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~  185 (298)
T d1n2sa_         123 --SPLNVYGKTKLAGEKALQDNC---PKHLIFRTSWVYAGKGNN------FAKTMLRLAKERQTLSVINDQ------YGA  185 (298)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHHC---SSEEEEEECSEECSSSCC------HHHHHHHHHHHCSEEEEECSC------EEC
T ss_pred             --CCCchHhhhhhhhhhhHHhhh---cccccccccceeeccCCc------cchhhhhhhcccceeecccce------eec
Confidence              347899999999999998765   345666666655543222      244455555555544333333      788


Q ss_pred             cccHHHHHHHHHHhhc----CCCCCceEEEec-cccCHHHHHHHHHHhCC----CCc------cccCcCCC---CcceEe
Q 019415          244 LVHIDDVCEAHIFCME----KPSMSGRFFCTN-VFVSSAEIASCLQQNYP----EFH------IKQEYLDV---PKREIK  305 (341)
Q Consensus       244 ~i~v~D~a~~~~~~~~----~~~~~g~~n~~~-~~~s~~e~~~~i~~~~~----~~~------~~~~~~~~---~~~~~~  305 (341)
                      ++|+.|+++++..++.    .....++||+++ +.++..|+++.+.+...    ...      ++....+.   .+.+..
T Consensus       186 ~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~  265 (298)
T d1n2sa_         186 PTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSR  265 (298)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCC
T ss_pred             ccccchHHHHHHHHHhhhhccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccc
Confidence            9999999999988764    344567999988 56999999998887541    111      11111110   123457


Q ss_pred             ecchhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 019415          306 WGGTKLEE-KGFEYNYDLKMILDDSIKCGRKS  336 (341)
Q Consensus       306 ~d~~k~~~-lg~~~~~~~~~~l~~~~~~~~~~  336 (341)
                      +|++|+++ |||+|+ +|+++|+++++++...
T Consensus       266 ld~~K~~~~~~~~~~-~~~~gl~~~i~~~~~~  296 (298)
T d1n2sa_         266 LNTEKFQRNFDLILP-QWELGVKRMLTEMFTT  296 (298)
T ss_dssp             BCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred             cCHHHHHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence            89999988 999999 9999999999998765

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-29  Score=213.28  Aligned_cols=208  Identities=17%  Similarity=0.083  Sum_probs=159.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +|+|||||||||||++|+++|+++|+  +|++++| +......        .....+....+|+.+.+++.++++++|+|
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R-~~~~~~~--------~~~~~i~~~~~D~~~~~~~~~~~~~~d~v   84 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGR-RKLTFDE--------EAYKNVNQEVVDFEKLDDYASAFQGHDVG   84 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEES-SCCCCCS--------GGGGGCEEEECCGGGGGGGGGGGSSCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEec-Chhhhcc--------cccceeeeeeecccccccccccccccccc
Confidence            47899999999999999999999994  8999999 7643111        11246788889999999999999999999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ||+++.....  .+...+.+.|+.++.+++++|.+.+ +++|||+||..+ ++                           
T Consensus        85 i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~-~~---------------------------  133 (232)
T d2bkaa1          85 FCCLGTTRGK--AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGA-DK---------------------------  133 (232)
T ss_dssp             EECCCCCHHH--HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTC-CT---------------------------
T ss_pred             cccccccccc--cchhhhhhhcccccceeeecccccC-ccccccCCcccc-cc---------------------------
Confidence            9999865432  2244778999999999999999999 999999999873 21                           


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCc-eEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGL-EVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKL  242 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (341)
                        .+.+.|+.+|..+|+.++.+   ++ +++|+||+.+||+.....     ....+........   .....      ..
T Consensus       134 --~~~~~Y~~~K~~~E~~l~~~---~~~~~~IlRP~~i~G~~~~~~-----~~~~~~~~~~~~~---~~~~~------~~  194 (232)
T d2bkaa1         134 --SSNFLYLQVKGEVEAKVEEL---KFDRYSVFRPGVLLCDRQESR-----PGEWLVRKFFGSL---PDSWA------SG  194 (232)
T ss_dssp             --TCSSHHHHHHHHHHHHHHTT---CCSEEEEEECCEEECTTGGGS-----HHHHHHHHHHCSC---CTTGG------GG
T ss_pred             --CccchhHHHHHHhhhccccc---cccceEEecCceeecCCCcCc-----HHHHHHHHHhhcc---CCccc------CC
Confidence              11367999999999999865   34 589999999999865543     2233333333221   11111      44


Q ss_pred             CcccHHHHHHHHHHhhcCCCCCceEEEecc
Q 019415          243 PLVHIDDVCEAHIFCMEKPSMSGRFFCTNV  272 (341)
Q Consensus       243 ~~i~v~D~a~~~~~~~~~~~~~g~~n~~~~  272 (341)
                      ..|+++|+|++++.++.++...+.+.+++.
T Consensus       195 ~~I~~~dvA~a~i~~~~~~~~~~~~i~~~~  224 (232)
T d2bkaa1         195 HSVPVVTVVRAMLNNVVRPRDKQMELLENK  224 (232)
T ss_dssp             TEEEHHHHHHHHHHHHTSCCCSSEEEEEHH
T ss_pred             CeEEHHHHHHHHHHHHhcCccCCeEEEcHH
Confidence            579999999999999988777777777653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-28  Score=202.09  Aligned_cols=199  Identities=16%  Similarity=0.193  Sum_probs=154.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ++||+||||||+||++++++|+++||+|++++| +.++.      ..  ....+++++.+|++|++++.++++++|+|||
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R-~~~~~------~~--~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~   73 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVR-DSSRL------PS--EGPRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CGGGS------CS--SSCCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEc-Chhhc------cc--ccccccccccccccchhhHHHHhcCCCEEEE
Confidence            568999999999999999999999999999999 76541      11  1235789999999999999999999999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCc
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHN  165 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  165 (341)
                      +++.....      .....+..++.++++++++.+ +++||++||..+++.....                        .
T Consensus        74 ~~g~~~~~------~~~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~------------------------~  122 (205)
T d1hdoa_          74 LLGTRNDL------SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKV------------------------P  122 (205)
T ss_dssp             CCCCTTCC------SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCS------------------------C
T ss_pred             EeccCCch------hhhhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCccc------------------------c
Confidence            99875433      223556789999999999999 9999999998854422110                        1


Q ss_pred             chhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcc
Q 019415          166 EYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLV  245 (341)
Q Consensus       166 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  245 (341)
                      .....|...|..+|+.++   +.+++++++||+.+++......                 ......+.      ....+|
T Consensus       123 ~~~~~~~~~~~~~e~~l~---~~~~~~tiirp~~~~~~~~~~~-----------------~~~~~~~~------~~~~~i  176 (205)
T d1hdoa_         123 PRLQAVTDDHIRMHKVLR---ESGLKYVAVMPPHIGDQPLTGA-----------------YTVTLDGR------GPSRVI  176 (205)
T ss_dssp             GGGHHHHHHHHHHHHHHH---HTCSEEEEECCSEEECCCCCSC-----------------CEEESSSC------SSCSEE
T ss_pred             ccccccchHHHHHHHHHH---hcCCceEEEecceecCCCCccc-----------------EEEeeCCC------CCCCcC
Confidence            234678999999999887   4579999999999987543322                 01111122      277899


Q ss_pred             cHHHHHHHHHHhhcCCCCCc-eEEEe
Q 019415          246 HIDDVCEAHIFCMEKPSMSG-RFFCT  270 (341)
Q Consensus       246 ~v~D~a~~~~~~~~~~~~~g-~~n~~  270 (341)
                      +++|+|++++.+++++...| .+.++
T Consensus       177 ~~~DvA~~~~~~l~~~~~~g~~~~~s  202 (205)
T d1hdoa_         177 SKHDLGHFMLRCLTTDEYDGHSTYPS  202 (205)
T ss_dssp             EHHHHHHHHHHTTSCSTTTTCEEEEE
T ss_pred             CHHHHHHHHHHHhCCCCCCCEEEecC
Confidence            99999999999999877555 55554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.96  E-value=3.5e-29  Score=220.32  Aligned_cols=232  Identities=14%  Similarity=0.130  Sum_probs=168.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh--hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS--KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +++||||||||||||++|+++|+++||+|++++| +.....  +...+..+.  ..+++++.+|+.|.+.+.+.+.++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R-~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~~~~~   78 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFR-PEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQVDV   78 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECC-SCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEC-CCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhccCcch
Confidence            4578999999999999999999999999999999 654321  222222221  24799999999999999999999999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ++++++....          ..|..++.+++++|.+.+ ..+++++||.++ ++...            ..         
T Consensus        79 ~~~~~~~~~~----------~~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~-~~~~~------------~~---------  125 (312)
T d1qyda_          79 VISALAGGVL----------SHHILEQLKLVEAIKEAG-NIKRFLPSEFGM-DPDIM------------EH---------  125 (312)
T ss_dssp             EEECCCCSSS----------STTTTTHHHHHHHHHHSC-CCSEEECSCCSS-CTTSC------------CC---------
T ss_pred             hhhhhhhccc----------ccchhhhhHHHHHHHHhc-CCcEEEEeeccc-cCCCc------------cc---------
Confidence            9999876443          335667888999999998 778888888653 21111            11         


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc--cccccccchhhccC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE--YVYQTLRDTEEILG  240 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  240 (341)
                       ...+...|..+|..+++...   ..+++++++||+.+||+.....      ...+........  ..++++.      +
T Consensus       126 -~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~r~~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~g~------~  189 (312)
T d1qyda_         126 -ALQPGSITFIDKRKVRRAIE---AASIPYTYVSSNMFAGYFAGSL------AQLDGHMMPPRDKVLIYGDGN------V  189 (312)
T ss_dssp             -CCSSTTHHHHHHHHHHHHHH---HTTCCBCEEECCEEHHHHTTTS------SCTTCCSSCCSSEECCBTTSC------S
T ss_pred             -ccchhhhhhHHHHHHHHhhc---ccccceEEeccceeecCCccch------hhHHHHhhhcccccccccccc------c
Confidence             11235678888888777665   4579999999999999765433      111111111122  3344444      4


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCCCc--eEEEecc-ccCHHHHHHHHHHhCC
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSMSG--RFFCTNV-FVSSAEIASCLQQNYP  288 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~~g--~~n~~~~-~~s~~e~~~~i~~~~~  288 (341)
                      .++|||++|+|++++.++.++...+  .|+++++ .+|++|+++.+++.++
T Consensus       190 ~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g  240 (312)
T d1qyda_         190 KGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSE  240 (312)
T ss_dssp             EEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred             ccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHC
Confidence            8999999999999999998876554  4566664 5899999999999864

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=1.7e-28  Score=214.89  Aligned_cols=228  Identities=17%  Similarity=0.227  Sum_probs=165.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh---HhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD---LLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|||||||||||||++|++.|++.||+|++++| +........   .+..+.  ..+++++.+|+.+...+.+.+++++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R-~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~   78 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVR-ESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKNVD   78 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECC-CCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEC-CCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhhhce
Confidence            4689999999999999999999999999999999 765533222   222211  2478899999999999999999999


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPL  161 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~  161 (341)
                      .|+|+++...              ..++.++++++...+ ++++++.||.....              ++..        
T Consensus        79 ~vi~~~~~~~--------------~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~--------------~~~~--------  121 (307)
T d1qyca_          79 VVISTVGSLQ--------------IESQVNIIKAIKEVG-TVKRFFPSEFGNDV--------------DNVH--------  121 (307)
T ss_dssp             EEEECCCGGG--------------SGGGHHHHHHHHHHC-CCSEEECSCCSSCT--------------TSCC--------
T ss_pred             eeeecccccc--------------cchhhHHHHHHHHhc-cccceeeecccccc--------------cccc--------
Confidence            9999987533              334567888888888 88899988865221              1111        


Q ss_pred             ccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc-cccccccchhhccC
Q 019415          162 TCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE-YVYQTLRDTEEILG  240 (341)
Q Consensus       162 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  240 (341)
                        ...+...+...+...+..+..   .+++++++||+++||+.....      ...+........ ..++.+.      +
T Consensus       122 --~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~------~~~~~~~~~~~~~~~~~~~~------~  184 (307)
T d1qyca_         122 --AVEPAKSVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSL------AQAGLTAPPRDKVVILGDGN------A  184 (307)
T ss_dssp             --CCTTHHHHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTT------TCTTCSSCCSSEEEEETTSC------C
T ss_pred             --ccccccccccccccccchhhc---cCCCceecccceecCCCccch------hhhhhhhhhcccceeeeccc------c
Confidence              012346677777777777664   468999999999999864432      111111222222 3333444      3


Q ss_pred             CCCcccHHHHHHHHHHhhcCCCCCc--eEEEec-cccCHHHHHHHHHHhCCC
Q 019415          241 KLPLVHIDDVCEAHIFCMEKPSMSG--RFFCTN-VFVSSAEIASCLQQNYPE  289 (341)
Q Consensus       241 ~~~~i~v~D~a~~~~~~~~~~~~~g--~~n~~~-~~~s~~e~~~~i~~~~~~  289 (341)
                      .++|+|++|+|+++..++.++...+  .||+++ +.+|+.|+++.+.+.++.
T Consensus       185 ~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         185 RVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  236 (307)
T ss_dssp             EEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             cccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCC
Confidence            9999999999999999998876544  566666 569999999999999853

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.94  E-value=7.9e-27  Score=197.88  Aligned_cols=227  Identities=17%  Similarity=0.114  Sum_probs=163.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCe--EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYI--VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      .+++|||||||||||+++++.|+++|++  |+.++| +.++   ...+      ..+++++.+|+++.+.+.++++++|+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R-~~~~---~~~~------~~~~~~~~~d~~~~~~~~~~~~~~d~   71 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR-SAQG---KEKI------GGEADVFIGDITDADSINPAFQGIDA   71 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEES-CHHH---HHHT------TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcC-CHHH---HHhc------cCCcEEEEeeecccccccccccccee
Confidence            3679999999999999999999999975  556677 5432   1211      24788999999999999999999999


Q ss_pred             EEEeccCCcccc--------------chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           83 VFHVATPLQHID--------------GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        83 Vi~~a~~~~~~~--------------~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      |||+|+......              .........+|+.++.++++.+.... .+.+.+.|+.....+..+         
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~---------  141 (252)
T d2q46a1          72 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHP---------  141 (252)
T ss_dssp             EEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCG---------
T ss_pred             eEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcc---------
Confidence            999998654211              12233567789999999999999988 899999988763322111         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYV  228 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (341)
                      .              .......|...+...+....   +.+++++++||+++||+.....   +.        +......
T Consensus       142 ~--------------~~~~~~~~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~---~~--------~~~~~~~  193 (252)
T d2q46a1         142 L--------------NKLGNGNILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKEGGVR---EL--------LVGKDDE  193 (252)
T ss_dssp             G--------------GGGGGCCHHHHHHHHHHHHH---HSSSCEEEEEECEEECSCTTSS---CE--------EEESTTG
T ss_pred             c--------------ccccccchhhhhhhhhhhhh---cccccceeecceEEECCCcchh---hh--------hhccCcc
Confidence            0              11223456666665554443   4589999999999999965432   00        1111111


Q ss_pred             cccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEeccc----cCHHHHHHHHHHhC
Q 019415          229 YQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVF----VSSAEIASCLQQNY  287 (341)
Q Consensus       229 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~----~s~~e~~~~i~~~~  287 (341)
                      .        ..+..++||++|+|++++.+++++...| +||+++++    .++.|+.+++.+..
T Consensus       194 ~--------~~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~  249 (252)
T d2q46a1         194 L--------LQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT  249 (252)
T ss_dssp             G--------GGSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred             c--------ccCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence            1        1126789999999999999999888776 89998632    57888888887665

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=3.8e-27  Score=196.13  Aligned_cols=196  Identities=13%  Similarity=0.066  Sum_probs=137.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh-cCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI-QGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~   82 (341)
                      +|||||||||||||++|+++|+++|+  +|++++| +...            .++.+   ..+..|..++...+ ..+|+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r-~~~~------------~~~~~---~~~~~d~~~~~~~~~~~~d~   65 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR-KALA------------EHPRL---DNPVGPLAELLPQLDGSIDT   65 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBS-SCCC------------CCTTE---ECCBSCHHHHGGGCCSCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeC-Cchh------------hcccc---cccccchhhhhhccccchhe
Confidence            58999999999999999999999997  6777777 4321            11233   33344444344343 45899


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLT  162 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~  162 (341)
                      ||||+|........ ...+.+.|+.++.+++++|++.+ +++|||+||.++ ++.                         
T Consensus        66 vi~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~-~~~-------------------------  117 (212)
T d2a35a1          66 AFCCLGTTIKEAGS-EEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGA-DAK-------------------------  117 (212)
T ss_dssp             EEECCCCCHHHHSS-HHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTC-CTT-------------------------
T ss_pred             eeeeeeeecccccc-ccccccchhhhhhhccccccccc-cccccccccccc-ccc-------------------------
Confidence            99999876543322 34789999999999999999998 999999999874 311                         


Q ss_pred             cCcchhhhHHHhHHHHHHHHHhhccCCc-eEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCC
Q 019415          163 CHNEYLRVYIESKMKSEKELLSYGSSGL-EVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGK  241 (341)
Q Consensus       163 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (341)
                          +.+.|+.+|..+|+.++..   ++ +++++||+.|||+.....     ....+    ..........        .
T Consensus       118 ----~~~~y~~~K~~~E~~l~~~---~~~~~~I~Rp~~v~G~~~~~~-----~~~~~----~~~~~~~~~~--------~  173 (212)
T d2a35a1         118 ----SSIFYNRVKGELEQALQEQ---GWPQLTIARPSLLFGPREEFR-----LAEIL----AAPIARILPG--------K  173 (212)
T ss_dssp             ----CSSHHHHHHHHHHHHHTTS---CCSEEEEEECCSEESTTSCEE-----GGGGT----TCCCC----C--------H
T ss_pred             ----cccchhHHHHHHhhhcccc---ccccceeeCCcceeCCccccc-----HHHHH----HHHHhhccCC--------C
Confidence                2367999999999988754   34 699999999999876543     11111    1111111111        4


Q ss_pred             CCcccHHHHHHHHHHhhcCCCCCceEEEe
Q 019415          242 LPLVHIDDVCEAHIFCMEKPSMSGRFFCT  270 (341)
Q Consensus       242 ~~~i~v~D~a~~~~~~~~~~~~~g~~n~~  270 (341)
                      +..||++|+|++++.+++++. .|.+++.
T Consensus       174 ~~~i~v~DvA~ai~~~~~~~~-~g~~~~~  201 (212)
T d2a35a1         174 YHGIEACDLARALWRLALEEG-KGVRFVE  201 (212)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCC-SEEEEEE
T ss_pred             CcEEEHHHHHHHHHHHHcCCC-CCCEEEE
Confidence            457999999999999998655 4554443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.92  E-value=3.2e-24  Score=191.83  Aligned_cols=229  Identities=15%  Similarity=0.178  Sum_probs=162.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~V   83 (341)
                      ++|+|||||||||||++|++.|+++||+|++++| +.++ .....+...    ++++++.+|++|+ +.+..++.++|++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R-~~~~-~~~~~~~~~----~~v~~~~gD~~d~~~~~~~a~~~~~~~   75 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH-SLKG-LIAEELQAI----PNVTLFQGPLLNNVPLMDTLFEGAHLA   75 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEES-CSCS-HHHHHHHTS----TTEEEEESCCTTCHHHHHHHHTTCSEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEEC-Ccch-hhhhhhccc----CCCEEEEeeCCCcHHHHHHHhcCCceE
Confidence            4589999999999999999999999999999999 8766 333333332    4899999999985 4577888899998


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTC  163 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  163 (341)
                      ++......           ..++..+.+++++|.+.+ ++++++.||.........                        
T Consensus        76 ~~~~~~~~-----------~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~~------------------------  119 (350)
T d1xgka_          76 FINTTSQA-----------GDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYGP------------------------  119 (350)
T ss_dssp             EECCCSTT-----------SCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTSS------------------------
T ss_pred             Eeeccccc-----------chhhhhhhHHHHHHHHhC-CCceEEEeeccccccCCc------------------------
Confidence            87754322           234667889999999999 888888988753321111                        


Q ss_pred             CcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCC
Q 019415          164 HNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLP  243 (341)
Q Consensus       164 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (341)
                        .+...|..+|...|..+..   .+++++++|++.+++......  .+.+..   .....+......   ..++...++
T Consensus       120 --~~~~~~~~~k~~~~~~~~~---~~~~~~~vr~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~---~~~~~~~~~  186 (350)
T d1xgka_         120 --WPAVPMWAPKFTVENYVRQ---LGLPSTFVYAGIYNNNFTSLP--YPLFQM---ELMPDGTFEWHA---PFDPDIPLP  186 (350)
T ss_dssp             --CCCCTTTHHHHHHHHHHHT---SSSCEEEEEECEEGGGCBSSS--CSSCBE---EECTTSCEEEEE---SSCTTSCEE
T ss_pred             --ccchhhhhhHHHHHHHHHh---hccCceeeeeceeeccccccc--cccccc---cccccccceeee---cccCCCcce
Confidence              1235677889888887774   468999999999988654433  111100   111111111111   111233778


Q ss_pred             cccH-HHHHHHHHHhhcCCC--CCc-eEEEeccccCHHHHHHHHHHhCC
Q 019415          244 LVHI-DDVCEAHIFCMEKPS--MSG-RFFCTNVFVSSAEIASCLQQNYP  288 (341)
Q Consensus       244 ~i~v-~D~a~~~~~~~~~~~--~~g-~~n~~~~~~s~~e~~~~i~~~~~  288 (341)
                      ++++ +|+++++..++....  ..| +|+++++.+|+.|+++++.+.++
T Consensus       187 ~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G  235 (350)
T d1xgka_         187 WLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALN  235 (350)
T ss_dssp             EECHHHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHT
T ss_pred             EEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHC
Confidence            8876 799999999986542  234 78898878999999999999874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.8e-20  Score=157.01  Aligned_cols=220  Identities=15%  Similarity=0.102  Sum_probs=158.5

Q ss_pred             CCCC-CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHK-SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~-~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |+.. ++|++|||||++-||+++++.|++.|++|++.+| +..+   ++.+...   .++++.+.+|++|++.++++++ 
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r-~~~~---l~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~   73 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSR-TQAD---LDSLVRE---CPGIEPVCVDLGDWEATERALGS   73 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHH---STTCEEEECCTTCHHHHHHHHTT
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHH---HHHHHHh---cCCCeEEEEeCCCHHHHHHHHHH
Confidence            6644 7899999999999999999999999999999999 6533   3333221   1368899999999999998886 


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+|+......     .+.++..+++|+.++..+.+++..    .+.-.++|++||.....+..         
T Consensus        74 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~---------  144 (244)
T d1pr9a_          74 VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT---------  144 (244)
T ss_dssp             CCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT---------
T ss_pred             hCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc---------
Confidence              5899999999766543     566789999999999888776543    22246999999987544322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.||...+.+.+.++ +   +|+++..+.||.|..+.....  ...  ....+.+.
T Consensus       145 -------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~~--~~~~~~~~  201 (244)
T d1pr9a_         145 -------------------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT--WSD--PHKAKTML  201 (244)
T ss_dssp             -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTT--SCS--HHHHHHHH
T ss_pred             -------------------chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhh--ccC--hHHHHHHH
Confidence                               24789999999999998887 3   489999999999966532221  000  11112221


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      +..+             ..-+...+|+|+++.+++...  ..+| ++.+.++
T Consensus       202 ~~~p-------------l~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         202 NRIP-------------LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             TTCT-------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcCC-------------CCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence            1110             233677999999999988643  3466 5555443

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=1.7e-20  Score=157.47  Aligned_cols=208  Identities=17%  Similarity=0.103  Sum_probs=149.9

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      +.++|++|||||++-||+++++.|++.|++|.+.+| +...             ...+..+++|++|+++++++++    
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHR-GSGA-------------PKGLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SSCC-------------CTTSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-Ccch-------------hcCceEEEEecCCHHHHHHHHHHHHH
Confidence            346799999999999999999999999999999999 6543             2467789999999988877765    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++..+.+++    ++.+ -.++|++||.....+...       
T Consensus        70 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~-------  141 (237)
T d1uzma1          70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGN-------  141 (237)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----C-------
T ss_pred             hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcc-------
Confidence               5899999999755432     5667899999999988776654    4444 569999999875543222       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                           ...|+.||...+.+.+.++ +   +|+++..+.||.+..+.....      ........
T Consensus       142 ---------------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~------~~~~~~~~  194 (237)
T d1uzma1         142 ---------------------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL------DERIQQGA  194 (237)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS------CHHHHHHH
T ss_pred             ---------------------cHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc------CHHHHHHH
Confidence                                 4789999999999888876 3   589999999999955421111      11111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....   +          ..-+...+|+|+++.+++...  ..+| ++.+.++
T Consensus       195 ~~~~---p----------l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         195 LQFI---P----------AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             GGGC---T----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhcC---C----------CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            1110   0          233677999999999988643  3466 5566443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.86  E-value=6.9e-20  Score=155.21  Aligned_cols=217  Identities=15%  Similarity=0.075  Sum_probs=157.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      .+|.+|||||++-||+++++.|++.|++|++.+| +.+......  ..+......+.++++|++|++++.++++      
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r-~~~~l~~~~--~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISR-TQKSCDSVV--DEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEES-SHHHHHHHH--HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHH--HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999 765433222  1222334578999999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+|+......     .+.++..+++|+.++..+.+++    ++.+ -.++|++||.....+...         
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~---------  155 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVG---------  155 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTT---------
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCC---------
Confidence             6899999999765433     5677899999999998888765    3344 579999999886553322         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.||...+.+.+.++ +   +|+++..+.||.+-.+.....      .+...+.+..
T Consensus       156 -------------------~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~------~~~~~~~~~~  210 (251)
T d2c07a1         156 -------------------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI------SEQIKKNIIS  210 (251)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C------CHHHHHHHHT
T ss_pred             -------------------CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc------CHHHHHHHHh
Confidence                               4789999999999999887 3   489999999999976643322      2333333322


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..+             ..-+...+|+|+++.+++...  ...| ++.+.+|
T Consensus       211 ~~p-------------l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         211 NIP-------------AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             TCT-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCC-------------CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            211             223667999999999988643  2466 5555443

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=2.1e-20  Score=157.50  Aligned_cols=218  Identities=17%  Similarity=0.151  Sum_probs=157.3

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |+ .++|++|||||++-||+++++.|++.|++|++.+| +.+.   ++.+ ...    .+++++.+|++|++.++++++ 
T Consensus         1 md-l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~---l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~   71 (242)
T d1cyda_           1 LN-FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTR-TNSD---LVSLAKEC----PGIEPVCVDLGDWDATEKALGG   71 (242)
T ss_dssp             CC-CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHHS----TTCEEEECCTTCHHHHHHHHTT
T ss_pred             CC-CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHhc----CCCeEEEEeCCCHHHHHHHHHH
Confidence            66 46899999999999999999999999999999999 6533   2222 222    368899999999999999887 


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++..+.+++..    .+.-.++|++||.....+..         
T Consensus        72 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------  142 (242)
T d1cyda_          72 IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP---------  142 (242)
T ss_dssp             CCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT---------
T ss_pred             cCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC---------
Confidence              5899999999765432     566788999999999999886543    22246899999987544322         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.+|...+.+.+.++ +   +|+++..+.||.+-.+......  .  .+.....+.
T Consensus       143 -------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~--~--~~~~~~~~~  199 (242)
T d1cyda_         143 -------------------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS--A--DPEFARKLK  199 (242)
T ss_dssp             -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT--C--CHHHHHHHH
T ss_pred             -------------------ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc--C--CHHHHHHHH
Confidence                               25789999999999999887 3   4899999999998654211110  0  011111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...+             ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       200 ~~~p-------------l~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         200 ERHP-------------LRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             HHST-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             hcCC-------------CCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence            1100             334677999999999988642  2456 6666554

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=2.2e-20  Score=157.29  Aligned_cols=209  Identities=12%  Similarity=0.093  Sum_probs=154.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||++-||+++++.|++.|++|++.+| +.+.   .+.+..  .......++++|++|+++++++++      
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r-~~~~---~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI-LDEE---GKAMAA--ELADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHH--HTGGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHH--HhhCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999 6543   222222  112478899999999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.+++.+++|+.++..+.+++    .+.+ -.++|++||.....+..          
T Consensus        79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~----------  147 (244)
T d1nffa_          79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTV----------  147 (244)
T ss_dssp             SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------
T ss_pred             CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccccc----------
Confidence             5899999999765432     5667899999999999888765    3333 46899999987644322          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....              .+
T Consensus       148 ------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~--------------~~  195 (244)
T d1nffa_         148 ------------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV--------------PE  195 (244)
T ss_dssp             ------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS--------------CT
T ss_pred             ------------------cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh--------------hH
Confidence                              25789999999999998887 3   489999999999865532211              00


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .....+          ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       196 ~~~~~p----------l~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG  236 (244)
T d1nffa_         196 DIFQTA----------LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  236 (244)
T ss_dssp             TCSCCS----------SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhcc----------ccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCC
Confidence            000000          233678999999999998542  3466 6666554

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.5e-20  Score=158.50  Aligned_cols=214  Identities=15%  Similarity=0.120  Sum_probs=156.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||++-||+++++.|++.|++|++.+| +.+.   ++.+...  ......++.+|++++++++++++      
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r-~~~~---l~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTAT-SENG---AQAISDY--LGANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-SHHH---HHHHHHH--HGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC-CHHH---HHHHHHH--hCCCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            5789999999999999999999999999999999 7543   2222221  12367889999999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+|+......     .+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+...         
T Consensus        77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~---------  146 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGG---------  146 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT---------
T ss_pred             CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCCC---------
Confidence             5899999998765543     56678999999999999988773    333 479999999876554322         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.||...+.+.+.++    .+|+++..+.||.+-.+.....      .......+..
T Consensus       147 -------------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~------~~~~~~~~~~  201 (243)
T d1q7ba_         147 -------------------QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL------SDDQRAGILA  201 (243)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS------CHHHHHHHHT
T ss_pred             -------------------CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh------hhhHHHHHHh
Confidence                               4789999999999998887    3599999999999854422111      1111122211


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..+             ..-+...+|+|+++.+++...  ..+| ++.+.++
T Consensus       202 ~~p-------------l~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG  239 (243)
T d1q7ba_         202 QVP-------------AGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG  239 (243)
T ss_dssp             TCT-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCC-------------CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            110             233677999999999998643  2466 5666554

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=1.4e-19  Score=152.80  Aligned_cols=218  Identities=17%  Similarity=0.121  Sum_probs=153.2

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|.+.+| +.+..+..   +..     +.+++++|++|+++++++++     
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~-~~~~~~~~---~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDL-RPEGKEVA---EAI-----GGAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-STTHHHHH---HHH-----TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHH---HHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999999 76543322   222     45678999999988777765     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .++++..+++|+.++..+.+++..    .+ -.++|++||.....+..         
T Consensus        74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~~---------  143 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQ---------  143 (248)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCT---------
T ss_pred             cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-ccccccccccccccccc---------
Confidence              6899999999765433     566788999999999998887743    33 46999999988655332         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.+|...+.+.+.++ +   +|+++..+.||.+-.+..........-.....+.+.
T Consensus       144 -------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~  204 (248)
T d2d1ya1         144 -------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE  204 (248)
T ss_dssp             -------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHH
T ss_pred             -------------------ccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHH
Confidence                               25789999999999988876 3   599999999999854311000000000000111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      +.       ..      ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       205 ~~-------~p------l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  243 (248)
T d2d1ya1         205 DL-------HA------LRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  243 (248)
T ss_dssp             TT-------ST------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hc-------CC------CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcC
Confidence            11       00      334667999999999998643  2466 5666554

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.85  E-value=2e-19  Score=151.94  Aligned_cols=217  Identities=18%  Similarity=0.160  Sum_probs=151.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|.+|||||++-||+++++.|++.|++|.+.+| +... .....++..   ..++.++.+|++|+++++++++      
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~-~~~~-~~~~~~~~~---g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADL-VPAP-EAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SCCH-HHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CchH-HHHHHHHHc---CCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999 7643 222223332   3578999999999988887754      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                       ++|++||+||......     .+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+...         
T Consensus        79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~---------  148 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEA---------  148 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSS---------
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCcc---------
Confidence             6899999999765432     56778999999999999888763    344 479999999875443222         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                         ...|+.||...+.+.+.++    .+|+++..+.||.+-.+.....     ...........
T Consensus       149 -------------------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~-----~~~~~~~~~~~  204 (247)
T d2ew8a1         149 -------------------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS-----ALSAMFDVLPN  204 (247)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------------------C
T ss_pred             -------------------cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc-----ccchhHHHHHH
Confidence                               4789999999999888887    3489999999999966533221     01111111111


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..   .+         ..-+...+|+|+++++++...  -.+| ++.+.++
T Consensus       205 ~~---~~---------l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         205 ML---QA---------IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             TT---SS---------SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             Hh---cc---------CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            00   00         223556899999999998643  2466 5666554

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.85  E-value=3.8e-19  Score=149.65  Aligned_cols=215  Identities=14%  Similarity=0.018  Sum_probs=153.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |. .++|++|||||++-||+++++.|++.|++|++.+| +..+   ++.....    -+.+++.+|++|+++++++++  
T Consensus         1 M~-L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r-~~~~---l~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~   71 (242)
T d1ulsa_           1 MR-LKDKAVLITGAAHGIGRATLELFAKEGARLVACDI-EEGP---LREAAEA----VGAHPVVMDVADPASVERGFAEA   71 (242)
T ss_dssp             CT-TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHT----TTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CC-CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHH----cCCeEEEEecCCHHHHHHHHHHH
Confidence            55 35789999999999999999999999999999999 6533   3333221    157789999999988887764  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                           ++|++||+||......     .+.++..+++|+.++..+.+++...   ..-..++++||.. ..+..       
T Consensus        72 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-~~~~~-------  143 (242)
T d1ulsa_          72 LAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNL-------  143 (242)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCT-------
T ss_pred             HHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-ccCCC-------
Confidence                 5899999999765432     5667899999999999998876443   1145677777754 33221       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....      .......
T Consensus       144 ---------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~------~~~~~~~  196 (242)
T d1ulsa_         144 ---------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV------PEKVREK  196 (242)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS------CHHHHHH
T ss_pred             ---------------------CCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC------CHHHHHH
Confidence                                 24789999999999988886 3   489999999999976543322      2223222


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .....+             ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       197 ~~~~~p-------------l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  237 (242)
T d1ulsa_         197 AIAATP-------------LGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (242)
T ss_dssp             HHHTCT-------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhcCC-------------CCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCC
Confidence            222211             233667899999999998642  3467 5555443

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=8.9e-20  Score=154.83  Aligned_cols=218  Identities=13%  Similarity=0.073  Sum_probs=157.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|++|||||++-||+++++.|++.|++|.+.+| +.+..... +.+..   ...++.++++|++++++++++++     
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~~~~~~~~l~~---~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDI-NADAANHVVDEIQQ---LGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEES-CHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHH---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999 76543322 22222   23578999999999988777664     


Q ss_pred             --CCCEEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                        ++|++||+||......    .+.++..+++|+.++..+.+++..    .+ -.++|++||.....+..          
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~----------  154 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNI----------  154 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCT----------
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhcccc----------
Confidence              6899999999765432    566789999999999988776533    33 46899999987544322          


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhc
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTN  224 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~  224 (341)
                                        ....|+.+|...+.+.+.++ +   +|+++..+.||.|-.+.....     +.+.....+.+
T Consensus       155 ------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~-----~~~e~~~~~~~  211 (255)
T d1fmca_         155 ------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-----ITPEIEQKMLQ  211 (255)
T ss_dssp             ------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-----CCHHHHHHHHH
T ss_pred             ------------------ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc-----CCHHHHHHHHh
Confidence                              25789999999999998887 3   589999999999965432111     11222222222


Q ss_pred             CccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          225 NEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      ..+             ..-+...+|+|+++.+++...  -..| ++.+.+|.
T Consensus       212 ~~p-------------l~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         212 HTP-------------IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             TCS-------------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cCC-------------CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            111             223567899999999998643  3466 66776664

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.84  E-value=2.3e-19  Score=151.91  Aligned_cols=215  Identities=12%  Similarity=0.001  Sum_probs=154.3

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .++|++|||||++-||+++++.|+++|++|++.+| +.+.   .+.+..  .....+.++++|++++++++++++     
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~---~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADV-LDEE---GAATAR--ELGDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHH--TTGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHH--HhCCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999 6533   222222  223578999999999988887764     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+|+......     .+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+...        
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~~--------  147 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLAL--------  147 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT--------
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccccc--------
Confidence              6899999999765433     56678899999999999988763    334 579999999876553222        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                          ...|+.||...+.+.+.++ +   +|+++..+.||.+..+.          ..   ....
T Consensus       148 --------------------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~----------~~---~~~~  194 (254)
T d1hdca_         148 --------------------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM----------TA---ETGI  194 (254)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH----------HH---HHTC
T ss_pred             --------------------hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc----------ch---hcCH
Confidence                                5789999999999998887 3   48999999999985431          11   1110


Q ss_pred             cCc-cccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNE-YVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~-~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ... ........      .|--...+|+|.++.+++...  ...| ++.+.++
T Consensus       195 ~~~~~~~~~~pl------~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG  241 (254)
T d1hdca_         195 RQGEGNYPNTPM------GRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             CCSTTSCTTSTT------SSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCCCC------CCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCC
Confidence            111 11111000      222235799999999998643  2466 6667654

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.84  E-value=4.6e-20  Score=157.06  Aligned_cols=219  Identities=14%  Similarity=0.101  Sum_probs=154.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|++|||||++-||+++++.|++.|++|.+.+| +.++ .. ..+.+..   ...++.++++|++++++++++++    
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r-~~~~~~~~~~~~~~~---~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYR-SKEDEANSVLEEIKK---VGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCHHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999 6542 11 1222222   23478899999999988887765    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++..+.+++    .+.+.-..+|++||.....+..        
T Consensus        82 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~--------  153 (261)
T d1geea_          82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWP--------  153 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT--------
T ss_pred             HhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCc--------
Confidence               6899999999765433     5667899999999998887765    3334234588999987544322        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.+|...+.+.+.++    .+|+++..+.||.|..+.....    ...+.....+
T Consensus       154 --------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~----~~~~~~~~~~  209 (261)
T d1geea_         154 --------------------LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK----FADPEQRADV  209 (261)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH----HHSHHHHHHH
T ss_pred             --------------------cccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhh----cCCHHHHHHH
Confidence                                14789999999999988887    3489999999999965421110    0001111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....+             ..-+...+|+|+++.+++...  ..+| ++.+.++
T Consensus       210 ~~~~p-------------l~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  249 (261)
T d1geea_         210 ESMIP-------------MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             HTTCT-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhcCC-------------CCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            11100             233667899999999998643  2466 6666554

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.84  E-value=6.9e-19  Score=150.63  Aligned_cols=223  Identities=18%  Similarity=0.164  Sum_probs=156.7

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|++.+| +....++..  ..+ .....+.++.+|++++++++++++     
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~--~~l-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADI-ADDHGQKVC--NNI-GSPDVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHH-CCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHh-cCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999 764422221  122 123468899999999988887765     


Q ss_pred             --CCCEEEEeccCCccc-----c--chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHI-----D--GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~-----~--~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                        ++|++||+||.....     .  .+.++..+++|+.++..+.+++..    .+ -.++|++||.....+...      
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~------  152 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEG------  152 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTT------
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccccc------
Confidence              589999999965432     1  456788999999999988877643    33 469999999875443211      


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....  ...-.......
T Consensus       153 ---------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~  209 (268)
T d2bgka1         153 ---------------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV--FGVDSSRVEEL  209 (268)
T ss_dssp             ---------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS--SSCCHHHHHHH
T ss_pred             ---------------------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhh--hcCCHHHHHHH
Confidence                                 13579999999999998886 3   589999999999977644332  11111111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .......            ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       210 ~~~~~~~------------~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG  251 (268)
T d2bgka1         210 AHQAANL------------KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGG  251 (268)
T ss_dssp             HHHTCSS------------CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhcccc------------CCCCcCHHHHHHHHHHHhChhhCCccCceEEECcC
Confidence            1111110            223667999999999998643  3467 6666554

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.84  E-value=2.3e-19  Score=152.53  Aligned_cols=222  Identities=15%  Similarity=0.094  Sum_probs=153.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||++-||+++++.|++.|++|++.+| +.........  .+......++++.+|++++++++++++      
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r-~~~~l~~~~~--~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSR-NEKELDECLE--IWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--HHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999 7644332221  122233578889999999987776653      


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ..|++||+|+......     .+.++..+++|+.++..+.+++.    +.+ ..++|++||..+..+..         
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~~---------  151 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALP---------  151 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCT---------
T ss_pred             CCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccccccc---------
Confidence              3799999999766532     56678999999999988887654    333 57999999988644321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.+|...+.+.+.++ +   +|+++..|.||.+..+..................+.
T Consensus       152 -------------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  212 (258)
T d1ae1a_         152 -------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI  212 (258)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH
T ss_pred             -------------------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHH
Confidence                               15789999999999998887 3   489999999999977643222000000111222111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcC--CCCCc-eEEEec
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK--PSMSG-RFFCTN  271 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~g-~~n~~~  271 (341)
                      ...   +          ..-+...+|+|.++..++..  ....| .+.+.+
T Consensus       213 ~~~---p----------lgR~~~pediA~~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         213 VKT---P----------MGRAGKPQEVSALIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             HHS---T----------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hcC---C----------CCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence            110   0          23378899999999999953  33567 455543

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.84  E-value=1.1e-19  Score=154.92  Aligned_cols=224  Identities=13%  Similarity=0.080  Sum_probs=152.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|++|||||++-||+++++.|++.|++|++.+| +... .+.. ..+...  ...++.++++|++|+++++++++    
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r-~~~~~~~~~~~~~~~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGF-GDAAEIEKVRAGLAAQ--HGVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECC-SCHHHHHHHHHHHHHH--HTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999998 6432 1111 112121  12478899999999988887765    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+||......     .+.++..+++|+.++..+.+++    ++.+ -.++|++||.....+...       
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~-------  151 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASAN-------  151 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT-------
T ss_pred             HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccCC-------
Confidence               5899999999765432     5667899999999998887765    4444 469999999886553222       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                           ...|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....      ........
T Consensus       152 ---------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~------~~~~~~~~  204 (260)
T d1x1ta1         152 ---------------------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ------ISALAEKN  204 (260)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------
T ss_pred             ---------------------cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhh------hhhhhhhc
Confidence                                 4789999999999998887 3   589999999999866532221      11000000


Q ss_pred             -hcC----ccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 -TNN----EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 -~~~----~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                       ...    ...+...-.      ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       205 ~~~~~~~~~~~~~~~~P------l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         205 GVDQETAARELLSEKQP------SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             ----------CHHHHCT------TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCChHHHHHHHHHhcCC------CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence             000    000000000      334678999999999988642  3466 5555444

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.84  E-value=3.2e-19  Score=151.54  Aligned_cols=229  Identities=15%  Similarity=0.099  Sum_probs=156.9

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |. .++|++|||||++-||+++++.|++.|++|.+.+| +.+.   ++.+..  ....++.++.+|++++++++++++  
T Consensus         1 M~-L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~---l~~~~~--~~~~~~~~~~~Dvt~~~~v~~~~~~~   73 (256)
T d1k2wa_           1 MR-LDGKTALITGSARGIGRAFAEAYVREGARVAIADI-NLEA---ARATAA--EIGPAACAIALDVTDQASIDRCVAEL   73 (256)
T ss_dssp             CT-TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEES-CHHH---HHHHHH--HHCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CC-CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHH--HhCCceEEEEeeCCCHHHHHHHHHHH
Confidence            55 46799999999999999999999999999999999 7543   222222  113478899999999988887765  


Q ss_pred             -----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 -----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                           ++|++||+||......     .+.++..+++|+.++..+.+++..    .+.-.++|++||.....+..      
T Consensus        74 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~------  147 (256)
T d1k2wa_          74 LDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA------  147 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------
T ss_pred             HHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc------
Confidence                 5899999999765433     566789999999999998876432    22246899999987544322      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....      ......
T Consensus       148 ----------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~------~~~~~~  199 (256)
T d1k2wa_         148 ----------------------LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGV------DAKFAD  199 (256)
T ss_dssp             ----------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHH------HHHHHH
T ss_pred             ----------------------cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhh------hhhhhh
Confidence                                  24789999999999998887 3   489999999998866531110      111111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ..........  ..........-+...+|+|.++.+++...  ...| ++.+.+|
T Consensus       200 ~~~~~~~~~~--~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         200 YENLPRGEKK--RQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             HHTCCTTHHH--HHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             hccCChHHHH--HHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence            0000000000  00000000334677999999999988542  3456 6677665

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.5e-20  Score=155.79  Aligned_cols=225  Identities=15%  Similarity=0.105  Sum_probs=151.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|.+|||||++-||+++++.|++.|++|.+.+| +.+................++.++.+|++++++++++++      
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW-NLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            4689999999999999999999999999999999 765433222211111112478899999999988887765      


Q ss_pred             -CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc----C--CcCEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS----G--TVKRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                       ++|++||+|+.....   ++++.+++|+.++..+..++...    +  .-.++|++||.....+...            
T Consensus        81 G~iDilVnnAg~~~~~---~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~------------  145 (254)
T d2gdza1          81 GRLDILVNNAGVNNEK---NWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ------------  145 (254)
T ss_dssp             SCCCEEEECCCCCCSS---SHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT------------
T ss_pred             CCcCeecccccccccc---cchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC------------
Confidence             589999999987654   36788999998888776666432    1  1246999999876553322            


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHh------hccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLS------YGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                      ...|+.||...+.+.+.      ++.+|+++..+.||.|-.+.....  ..   ..-.......
T Consensus       146 ----------------~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~--~~---~~~~~~~~~~  204 (254)
T d2gdza1         146 ----------------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESI--EK---EENMGQYIEY  204 (254)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGG--GC---HHHHGGGGGG
T ss_pred             ----------------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhc--cc---cccccccHHH
Confidence                            47899999999888764      234689999999999854311100  00   0000000000


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      ...+...-.      ..-+...+|+|+++++++.....+| ++.+.++
T Consensus       205 ~~~~~~~~p------~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG  246 (254)
T d2gdza1         205 KDHIKDMIK------YYGILDPPLIANGLITLIEDDALNGAIMKITTS  246 (254)
T ss_dssp             HHHHHHHHH------HHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETT
T ss_pred             HHHHHhcCC------CCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCC
Confidence            000000000      1225668999999999998766677 6677664

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.84  E-value=5.6e-20  Score=156.35  Aligned_cols=226  Identities=13%  Similarity=0.035  Sum_probs=155.7

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|.+.+| +.+.................+.++++|++|+++++++++     
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDV-SSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999 765433222111111223478899999999988887764     


Q ss_pred             --CCCEEEEeccCCcc-c-----cchhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH-I-----DGYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~-~-----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        ++|++||+||.... .     ..+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+...       
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~-------  152 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGN-------  152 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSS-------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCCCC-------
Confidence              58999999996432 1     156678999999999999988763    333 579999999876553322       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCC--CCCCchhhhhHh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPY--SSTPVSVIGGLC  220 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~--~~~~~~~~~~~~  220 (341)
                                           ...|+.+|...+.+.+.++    .+|+++..+.||.+..+.....  ...+........
T Consensus       153 ---------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~  211 (258)
T d1iy8a_         153 ---------------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAE  211 (258)
T ss_dssp             ---------------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHH
T ss_pred             ---------------------chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHH
Confidence                                 5889999999999888886    3489999999999955421000  000000011111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      .+....       .      ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       212 ~~~~~~-------p------l~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG  253 (258)
T d1iy8a_         212 EFIQVN-------P------SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  253 (258)
T ss_dssp             HHHTTC-------T------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHhcC-------C------CCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcc
Confidence            111110       0      233677999999999998642  3466 5666554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.5e-19  Score=153.62  Aligned_cols=214  Identities=17%  Similarity=0.197  Sum_probs=149.6

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      |+..++|.+|||||++-||.++++.|+++|++|++.+| +..+.... +.+.. ......+.++++|++++++++++++ 
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r-~~~~l~~~~~~l~~-~~~~~~~~~~~~Dls~~~~v~~~v~~   82 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCAR-TVGNIEELAAECKS-AGYPGTLIPYRCDLSNEEDILSMFSA   82 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH-TTCSSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHh-cCCCceEEEEEccCCCHHHHHHHHHH
Confidence            67677899999999999999999999999999999999 76443322 22222 1223478899999999988877765 


Q ss_pred             ------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcC-CcCEEEEecccccccCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSG-TVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                            ++|++||+|+......     .+.++..+++|+.+...+.+++.    +.+ .-.++|++||.+.....+.   
T Consensus        83 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~---  159 (257)
T d1xg5a_          83 IRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL---  159 (257)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC---
T ss_pred             HHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC---
Confidence                  6899999999765432     56678999999999988877653    332 1369999999874332111   


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc------cCCceEEEEecCceeCCCCCCCCCCCchhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG------SSGLEVVALALGVVAGDTNLPYSSTPVSVI  216 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~------~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~  216 (341)
                                             .....|+.+|...+.+.+.++      .+++++..+-||.+-.+.....  ......
T Consensus       160 -----------------------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~--~~~~~~  214 (257)
T d1xg5a_         160 -----------------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKL--HDKDPE  214 (257)
T ss_dssp             -----------------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHH--TTTCHH
T ss_pred             -----------------------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhc--ChhhHH
Confidence                                   224679999999999987765      2489999999988743311100  000011


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                      .....       .+          ...++..+|+|+++..++..+
T Consensus       215 ~~~~~-------~~----------~~r~~~pedvA~~v~fL~s~~  242 (257)
T d1xg5a_         215 KAAAT-------YE----------QMKCLKPEDVAEAVIYVLSTP  242 (257)
T ss_dssp             HHHHH-------HC-------------CBCHHHHHHHHHHHHHSC
T ss_pred             HHHhc-------CC----------CCCCcCHHHHHHHHHHHhCCh
Confidence            11000       00          344778999999999998754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.1e-19  Score=151.87  Aligned_cols=221  Identities=13%  Similarity=0.109  Sum_probs=153.5

Q ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            3 HKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         3 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ..++|++|||||++-||+++++.|++.|++|++.+| +.+.   ++.+...   .++..++.+|++|+++++++++    
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~---~~~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~~~~   75 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDK-DESG---GRALEQE---LPGAVFILCDVTQEDDVKTLVSETIR   75 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHHh---cCCCeEEEccCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999 6533   3333221   1368899999999988887765    


Q ss_pred             ---CCCEEEEeccCCccc----c--chhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI----D--GYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~----~--~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                         ++|++||+||.....    .  .+.++..+++|+.++..+.+++...-  +-.++|++||.....+...        
T Consensus        76 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~--------  147 (250)
T d1ydea1          76 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ--------  147 (250)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT--------
T ss_pred             hcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccC--------
Confidence               589999999964321    1  45578999999999999888764330  1269999999876553322        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-CCCCchhhhhHhhH
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-SSTPVSVIGGLCQL  222 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-~~~~~~~~~~~~~~  222 (341)
                                          ...|+.+|...+.+.+.++ +   +|+++..+.||.|-.+..... ...+.....+....
T Consensus       148 --------------------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  207 (250)
T d1ydea1         148 --------------------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGM  207 (250)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHH
T ss_pred             --------------------cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHH
Confidence                                5789999999999988887 3   489999999999854311000 00000011111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC-CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP-SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~g-~~n~~~~  272 (341)
                      ...        .      ..-+...+|+|+++.+++... -..| ++.+.++
T Consensus       208 ~~~--------p------l~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG  245 (250)
T d1ydea1         208 LAQ--------P------LGRMGQPAEVGAAAVFLASEANFCTGIELLVTGG  245 (250)
T ss_dssp             HTS--------T------TSSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             hcC--------C------CCCCCCHHHHHHHHHHHhCccCCCcCCeEEECCC
Confidence            110        0      334677999999999988532 2456 5556543

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.83  E-value=3.1e-19  Score=151.10  Aligned_cols=219  Identities=14%  Similarity=0.096  Sum_probs=153.4

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|.+.+| +.+.......  .+ .....+.++.+|++|+++++++++     
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~~~~~~~--~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGR-HSDVGEKAAK--SV-GTPDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HH-CCTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--Hh-CCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999 7644322221  11 223579999999999988777765     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+|+......     .+.++..+++|+.++..+.+++..    .+.-.++|++||.....+..         
T Consensus        80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~---------  150 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP---------  150 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT---------
T ss_pred             hCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCC---------
Confidence              5899999999765432     566778999999999999887643    33113889999987544321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc------cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG------SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~------~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                         ....|+.+|...+.+.+.++      ++|+++..+.||.+..+.....   +  .......
T Consensus       151 -------------------~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~---~--~~~~~~~  206 (251)
T d1zk4a1         151 -------------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL---P--GAEEAMS  206 (251)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS---T--THHHHHT
T ss_pred             -------------------CchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhc---C--CHHHHHH
Confidence                               14789999999988877654      3489999999999965421111   0  0000000


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                         .....+          ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       207 ---~~~~~p----------l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         207 ---QRTKTP----------MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             ---STTTCT----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---HHhCCC----------CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence               000000          223677999999999988643  2466 5566444

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.83  E-value=2.8e-19  Score=151.65  Aligned_cols=221  Identities=14%  Similarity=0.101  Sum_probs=156.1

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC-ChHHHHHHhc-
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY-DPDTFENAIQ-   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~-   78 (341)
                      |+ .++|+||||||++-||.+++++|++.|++|+++.| +.++......+.... ...++.++.+|++ +.++++++++ 
T Consensus         1 m~-l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~   77 (254)
T d1sbya1           1 MD-LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILD-RVENPTALAELKAIN-PKVNITFHTYDVTVPVAESKKLLKK   77 (254)
T ss_dssp             CC-CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEE-SSCCHHHHHHHHHHC-TTSEEEEEECCTTSCHHHHHHHHHH
T ss_pred             CC-CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEEC-CcccHHHHHHHHhhC-CCCCEEEEEeecCCCHHHHHHHHHH
Confidence            55 46899999999999999999999999999999989 766645444443322 2347999999997 5445555443 


Q ss_pred             ------CCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc------CCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS------GTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                            ++|++||+||....   +.++.++++|+.++.++..++...      +...++|++||..+..+...       
T Consensus        78 ~~~~~g~iDilvnnAG~~~~---~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~-------  147 (254)
T d1sbya1          78 IFDQLKTVDILINGAGILDD---HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ-------  147 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCT---TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT-------
T ss_pred             HHHHcCCCCEEEeCCCCCCH---HHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC-------
Confidence                  68999999997654   447899999999999988876442      12357999999886553322       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                           ...|+.||.....+.+.++ +   .|+++..+.||.|..+-.............+....
T Consensus       148 ---------------------~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~  206 (254)
T d1sbya1         148 ---------------------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL  206 (254)
T ss_dssp             ---------------------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH
T ss_pred             ---------------------CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc
Confidence                                 5789999999999998887 3   38999999999997652111100000000111100


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEeccc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNVF  273 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~~  273 (341)
                                 .      .+.....+++|++++.+++... .| ++.+.++.
T Consensus       207 -----------~------~~~~~~~e~va~~~~~~~~~~~-tG~vi~vdgG~  240 (254)
T d1sbya1         207 -----------L------SHPTQTSEQCGQNFVKAIEANK-NGAIWKLDLGT  240 (254)
T ss_dssp             -----------T------TSCCEEHHHHHHHHHHHHHHCC-TTCEEEEETTE
T ss_pred             -----------c------cCCCCCHHHHHHHHHHhhhCCC-CCCEEEECCCE
Confidence                       0      3445578999999998887554 56 67776653

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.83  E-value=2.6e-19  Score=152.29  Aligned_cols=221  Identities=14%  Similarity=0.110  Sum_probs=154.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||++-||+++++.|++.|++|++.+| +.......  ...+......+.++.+|++++++++++++      
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~--~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSR-NQKELNDC--LTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHH--HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHH--HHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999 76543222  12222234578899999999987776653      


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        +.|++||+||......     .+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+..         
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~---------  153 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVP---------  153 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCT---------
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccccc---------
Confidence              3799999999765433     56678999999999998887763    333 57999999987544321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCc-hhhhhHhhH
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPV-SVIGGLCQL  222 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~-~~~~~~~~~  222 (341)
                                         ....|+.+|...+.+.+.++ +   +|+++..+.||.|-.+.....  ... ........+
T Consensus       154 -------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~~  212 (259)
T d2ae2a_         154 -------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMT--IQDPEQKENLNKL  212 (259)
T ss_dssp             -------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHH--TTSHHHHHHHHHH
T ss_pred             -------------------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhh--hhchhhHHHHHHH
Confidence                               24789999999999998887 4   489999999999855421110  000 011111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....+             ..-+...+|+|+++.+++...  -.+| ++.+.++
T Consensus       213 ~~~~p-------------l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         213 IDRCA-------------LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             HHTST-------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhcCC-------------CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            11110             223667999999999988643  2466 5566544

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=1.6e-19  Score=152.94  Aligned_cols=220  Identities=16%  Similarity=0.108  Sum_probs=153.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|++|||||++-||+++++.|+++|++|.+.+| +.+..... +.+..  .....+.++.+|++++++++++++     
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~~l~~--~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASR-NLEEASEAAQKLTE--KYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHH--HhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999 76543222 12222  112478899999999988877764     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++..+++|+.++..+.+++..    .+ -.++|++||........         
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~---------  150 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTM---------  150 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCS---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccC---------
Confidence              5899999999755432     566789999999999998887643    33 46999999865322111         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                        .....|+.+|...+.+.+.++    .+|+++..+.||.+-.+.....  ..  -+.....+.
T Consensus       151 ------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~--~~--~~~~~~~~~  208 (251)
T d1vl8a_         151 ------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV--FS--DPEKLDYML  208 (251)
T ss_dssp             ------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH--HT--CHHHHHHHH
T ss_pred             ------------------ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhc--cC--CHHHHHHHH
Confidence                              114789999999999998887    3589999999999965532211  00  011111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...+             ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       209 ~~~p-------------l~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG  247 (251)
T d1vl8a_         209 KRIP-------------LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  247 (251)
T ss_dssp             HTCT-------------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcCC-------------CCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcC
Confidence            1110             223567899999999988642  3466 5556443

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.83  E-value=5.4e-19  Score=150.36  Aligned_cols=221  Identities=17%  Similarity=0.121  Sum_probs=155.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      +|.+|||||++-||+++++.|++.|++|++.+| +.+..... +.+.   .....+.++++|++++++++++++      
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~l~~~~~~l~---~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCAR-GEEGLRTTLKELR---EAGVEADGRTCDVRSVPEIEALVAAVVERY   77 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHH---hcCCcEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999 76443322 2222   223578999999999988887765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc------CCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS------GTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                       ++|++||+||......     .+.+++.+++|+.++..+.+++...      + -.++|++||.....+...       
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~~-------  149 (257)
T d2rhca1          78 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVH-------  149 (257)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCTT-------
T ss_pred             CCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Cccccccccccccccccc-------
Confidence             5899999999765432     5667899999999999999987542      3 468999999875543322       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCC-----CCCCchhhh
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPY-----SSTPVSVIG  217 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~-----~~~~~~~~~  217 (341)
                                           ...|+.+|...+.+.+.++ +   +|+++..+.||.|-.+.....     .......+.
T Consensus       150 ---------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e  208 (257)
T d2rhca1         150 ---------------------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEE  208 (257)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHH
T ss_pred             ---------------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHH
Confidence                                 4789999999999998887 4   489999999999854311000     000000111


Q ss_pred             hHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC--CCCCc-eEEEecc
Q 019415          218 GLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK--PSMSG-RFFCTNV  272 (341)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~g-~~n~~~~  272 (341)
                      ....+....+             ..-+...+|+|+++.+++..  ....| ++.+.++
T Consensus       209 ~~~~~~~~~P-------------lgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         209 AFDRITARVP-------------IGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             HHHHHHTTST-------------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhcCC-------------CCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            1111111100             22367799999999999854  23466 5666544

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.82  E-value=7.3e-19  Score=149.31  Aligned_cols=225  Identities=17%  Similarity=0.098  Sum_probs=152.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------C
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------G   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~   79 (341)
                      |.+|||||++-||+++++.|++.|++|.+.+| +.+.......  .+.....++.++++|++++++++++++       +
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~--~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADY-NDATAKAVAS--EINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--HHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            45699999999999999999999999999999 7654332221  111223578899999999988887764       5


Q ss_pred             CCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           80 CDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      +|++||+||......     .+.++..+++|+.++..+.+++.    +.+.-.++|++||.....+..            
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~------------  146 (255)
T d1gega_          79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP------------  146 (255)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT------------
T ss_pred             ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCc------------
Confidence            899999999755432     56678999999999999987753    333246799999987544322            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                      ....|+.+|...+.+.+.++    .+|+++..+.||.+-.+....      +............
T Consensus       147 ----------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~------~~~~~~~~~~~~~  204 (255)
T d1gega_         147 ----------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE------IDRQVSEAAGKPL  204 (255)
T ss_dssp             ----------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH------HHHHHHHHHTCCT
T ss_pred             ----------------ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhh------hhhhhHhhhcccc
Confidence                            25789999999999988887    348999999999985431100      0111100000000


Q ss_pred             -ccccc-ccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          227 -YVYQT-LRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       227 -~~~~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                       ..... ...+    ...-+...+|+|+++.+++...  ...| ++.+.+|
T Consensus       205 ~~~~~~~~~~~----pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG  251 (255)
T d1gega_         205 GYGTAEFAKRI----TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  251 (255)
T ss_dssp             THHHHHHHTTC----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             hhHHHHHHhcC----CCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCC
Confidence             00000 0000    0233677999999999988642  2466 5566554

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.82  E-value=1.6e-18  Score=147.58  Aligned_cols=168  Identities=17%  Similarity=0.130  Sum_probs=132.2

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|.+.+| +.+.......  .+.....++..+.+|++++++++++++     
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~--~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDM-NREALEKAEA--SVREKGVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHH--HHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHH--HHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999 7644332222  222334578999999999988877765     


Q ss_pred             --CCCEEEEeccCCcc-cc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQH-ID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~-~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                        ++|++||+||.... ..     .+.++..+++|+.++..+.+++..    .+ -.++|++||.....+...       
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~-------  151 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPN-------  151 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTT-------
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCCcc-------
Confidence              58999999996532 11     566788999999999998887643    33 579999999876554322       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                           ...|+.+|...+.+.+.++ +   +|+++..+.||.|-.+
T Consensus       152 ---------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~  191 (260)
T d1zema1         152 ---------------------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  191 (260)
T ss_dssp             ---------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             ---------------------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence                                 4789999999999998887 3   4899999999999654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.82  E-value=4.6e-19  Score=149.16  Aligned_cols=214  Identities=16%  Similarity=0.092  Sum_probs=153.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||++-||+++++.|+++|++|++.+| +..+   ++.+..  ....++.++++|++++++++++++      
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r-~~~~---~~~~~~--~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDR-EERL---LAEAVA--ALEAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHH--TCCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHH--HcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999 6533   333322  234578999999999988877765      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcCCc-CEEEEecccccccCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSGTV-KRLIYTASVLCASPLKEDGSAGYKDSIDE  151 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E  151 (341)
                       ++|++||+|+......     .+.++..+++|+.++..+.+++...-.. ..++++||.+ ..+               
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a-~~~---------------  141 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA-GLG---------------  141 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT-TCC---------------
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc-ccc---------------
Confidence             5899999998655432     5667899999999999999887665423 3445444443 221               


Q ss_pred             CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCcc
Q 019415          152 TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEY  227 (341)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  227 (341)
                                   ......|+.+|...|.+.+.++ +   +|+++..+.||.+-.+.....      .........+..+
T Consensus       142 -------------~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~------~~~~~~~~~~~~p  202 (241)
T d2a4ka1         142 -------------AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL------PPWAWEQEVGASP  202 (241)
T ss_dssp             -------------HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS------CHHHHHHHHHTST
T ss_pred             -------------ccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh------hHhHHHHHHhCCC
Confidence                         1235789999999999999987 3   489999999999955432211      2222232222211


Q ss_pred             ccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          228 VYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       228 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                                   ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       203 -------------~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG  237 (241)
T d2a4ka1         203 -------------LGRAGRPEEVAQAALFLLSEESAYITGQALYVDGG  237 (241)
T ss_dssp             -------------TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -------------CCCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCC
Confidence                         233667999999999999643  3567 4555443

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.82  E-value=4.5e-19  Score=149.44  Aligned_cols=214  Identities=15%  Similarity=0.089  Sum_probs=151.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc-------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (341)
                      +.||||||++-||+++++.|++.|++|.+.++.+....+.. +.++.   ...++.++++|++|+++++++++       
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA---YGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---HTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH---cCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            47999999999999999999999999988655033222222 22222   23478899999999988877765       


Q ss_pred             CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 ~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                      ++|++||+|+......     .+.+++.+++|+.++..+.+++.    +.+ -.++|++||.....+...          
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~----------  147 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIG----------  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTT----------
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCC----------
Confidence            5899999999766432     56678999999999999877763    334 579999999886654322          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcC
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNN  225 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~  225 (341)
                                        ...|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....      .......+...
T Consensus       148 ------------------~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~------~~~~~~~~~~~  203 (244)
T d1edoa_         148 ------------------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL------GEDMEKKILGT  203 (244)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT------CHHHHHHHHTS
T ss_pred             ------------------CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh------hHHHHHHHHhc
Confidence                              4789999999999999887 3   599999999999854421111      12222222211


Q ss_pred             ccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC---CCc-eEEEec
Q 019415          226 EYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS---MSG-RFFCTN  271 (341)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~g-~~n~~~  271 (341)
                      .+             ..-+...+|+|+++.+++..+.   ..| ++.+.+
T Consensus       204 ~p-------------l~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdG  240 (244)
T d1edoa_         204 IP-------------LGRTGQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             CT-------------TCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             CC-------------CCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCC
Confidence            11             2236678999999998853222   456 455543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.82  E-value=4.6e-19  Score=150.70  Aligned_cols=218  Identities=13%  Similarity=0.086  Sum_probs=140.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||++-||.++++.|++.|++|++.+| +........  ..+......+.++.+|++++++++++++      
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r-~~~~l~~~~--~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCAR-NEYELNECL--SKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHH--HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHH--HHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999999 764432221  1112223479999999999987766653      


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ..|++||+||......     .+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+..         
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~---------  153 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSAS---------  153 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------------
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccccc---------
Confidence              4899999999765432     56678999999999998888763    334 57999999987544321         


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                         ....|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....     ......+.+.
T Consensus       154 -------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~-----~~~~~~~~~~  209 (259)
T d1xq1a_         154 -------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV-----YDDEFKKVVI  209 (259)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------
T ss_pred             -------------------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh-----chHHHHHHHH
Confidence                               14689999999999988887 3   489999999999966533221     0111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcC--CCCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK--PSMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~g-~~n~~~~  272 (341)
                      ...+             ..-+...+|+|.++.+++..  ...+| ++.+.++
T Consensus       210 ~~~p-------------l~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG  248 (259)
T d1xq1a_         210 SRKP-------------LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG  248 (259)
T ss_dssp             ---------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             hCCC-------------CCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCC
Confidence            1100             22256689999999998853  23456 4455433

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.81  E-value=7.4e-19  Score=148.87  Aligned_cols=221  Identities=16%  Similarity=0.087  Sum_probs=152.7

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|++.+| +...   .+.+..  .......++++|++++++++++++     
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~-~~~~---~~~~~~--~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI-NEAA---GQQLAA--ELGERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECS-CHHH---HHHHHH--HHCTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHH--HhCCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999 6543   222222  112468889999999987777765     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc--CCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS--GTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                        ++|++||+||......     .+.++..+++|+.++..+.+++...  .+-.++|++||.....+..           
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~-----------  146 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIE-----------  146 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCT-----------
T ss_pred             hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCcc-----------
Confidence              5899999999765432     5667899999999999887776442  1136899999987644322           


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                       ....|+.+|...+.+.+.++ +     +++++..+.||.+..+.....  .+.   ...+...
T Consensus       147 -----------------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~--~~~---~~~~~~~  204 (253)
T d1hxha_         147 -----------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS--LPK---GVSKEMV  204 (253)
T ss_dssp             -----------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH--SCT---TCCHHHH
T ss_pred             -----------------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhh--Ccc---hhhHHHH
Confidence                             25789999999998888776 3     359999999999865421100  000   0000011


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ........         .-.+...+|+|+++.+++...  ...| ++.+.++
T Consensus       205 ~~~~~~~~---------~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         205 LHDPKLNR---------AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             BCBTTTBT---------TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HhCccccc---------cCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            11100000         223667899999999998643  2466 5666554

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=3e-18  Score=148.37  Aligned_cols=222  Identities=16%  Similarity=0.127  Sum_probs=154.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhh-CC-CCCCceEEEecCCCChHHHHHHhc---
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKS-LP-GAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~-~~-~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ++|++|||||++-||+++++.|++.|++|++.+| +.++.... +.+.. .+ .....+..+.+|++|+++++++++   
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r-~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASR-KLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            6789999999999999999999999999999999 76543322 22322 11 224578999999999988887765   


Q ss_pred             ----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc----CCcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS----GTVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                          ++|++||+|+......     .+.++..+++|+.++..+.+++...    + -.++|++||.. ..+..       
T Consensus        90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~-~~~~~-------  160 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGFP-------  160 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCCT-------
T ss_pred             HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccccc-ccccc-------
Confidence                5899999998655432     5667899999999999988876433    3 35788777654 22111       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.+|...+.+.+.++ +   +|+++..|.||.|..+.....  .......+...
T Consensus       161 ---------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~  217 (297)
T d1yxma1         161 ---------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVEN--YGSWGQSFFEG  217 (297)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTT--SGGGGGGGGTT
T ss_pred             ---------------------ccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhh--ccccCHHHHHH
Confidence                                 14789999999999998887 4   489999999999976532221  11111111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....   .+          ..-+...+|+|.++.+++...  -.+| ++.+.++
T Consensus       218 ~~~~---~p----------lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG  258 (297)
T d1yxma1         218 SFQK---IP----------AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  258 (297)
T ss_dssp             GGGG---ST----------TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhc---CC----------CCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcC
Confidence            1111   00          233667899999999999643  3466 5666544

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.80  E-value=2.4e-18  Score=144.54  Aligned_cols=196  Identities=11%  Similarity=0.087  Sum_probs=145.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCe-------EEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYI-------VHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-   78 (341)
                      ..||||||++-||+++++.|+++|++       |...+| +..........  +......+.++.+|++|+++++++++ 
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r-~~~~l~~~~~~--~~~~g~~~~~~~~Dvt~~~~v~~~~~~   78 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR-TAADLEKISLE--CRAEGALTDTITADISDMADVRRLTTH   78 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES-CHHHHHHHHHH--HHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeC-CHHHHHHHHHH--HHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            34899999999999999999999987       888888 66443322221  22233578899999999988877765 


Q ss_pred             ------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDGSA  143 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~~~  143 (341)
                            ++|++||+|+......     .+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+...    
T Consensus        79 ~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~----  153 (240)
T d2bd0a1          79 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRH----  153 (240)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTT----
T ss_pred             HHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCCC----
Confidence                  5899999999765433     56678999999999999877764    334 479999999876543322    


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhH
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGL  219 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~  219 (341)
                                              ...|+.||...+.+.+.++    .+|+++..+.||.+-.+.....   +       
T Consensus       154 ------------------------~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~---~-------  199 (240)
T d2bd0a1         154 ------------------------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV---D-------  199 (240)
T ss_dssp             ------------------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC---C-------
T ss_pred             ------------------------ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc---C-------
Confidence                                    4789999999988888876    3589999999999965532211   0       


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS  262 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  262 (341)
                          ...              ...+...+|+|+++.+++..+.
T Consensus       200 ----~~~--------------~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         200 ----DEM--------------QALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             ----STT--------------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             ----Hhh--------------HhcCCCHHHHHHHHHHHHcCCc
Confidence                000              1124557999999999987654

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.80  E-value=3.1e-18  Score=146.91  Aligned_cols=229  Identities=12%  Similarity=0.049  Sum_probs=153.9

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|.+.+| +.+..... +.+.........+.++.+|+++++.++++++    
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGR-NEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999 76543322 2223321223478999999999988877765    


Q ss_pred             ---CCCEEEEeccCCcccc-------chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-------GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-------~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                         ++|++||+||......       .+.++..+++|+.++..+.+++..    .+ -.+++++||.+...+..      
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~~------  153 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHS------  153 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCT------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccccCC------
Confidence               5899999998643221       345788999999999988877643    33 46778777765333221      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.+|...+.+.+.++    .+|+++..+.||.|-.+.................
T Consensus       154 ----------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~  211 (274)
T d1xhla_         154 ----------------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYS  211 (274)
T ss_dssp             ----------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHH
T ss_pred             ----------------------CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHH
Confidence                                  14689999999999998876    3599999999999965421111000000111111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC--C-CCCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK--P-SMSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~-~~~g-~~n~~~~  272 (341)
                      .+.......+          ..-+...+|+|+++.+++..  . -..| ++.+.++
T Consensus       212 ~~~~~~~~iP----------lgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG  257 (274)
T d1xhla_         212 FIGSRKECIP----------VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG  257 (274)
T ss_dssp             HHHHCTTTCT----------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHHHcCCC----------CCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence            1111111111          22366799999999998852  2 3567 6666554

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.79  E-value=1.5e-18  Score=147.93  Aligned_cols=207  Identities=19%  Similarity=0.173  Sum_probs=151.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ...||||||+|-||.++++.|+++|+ .|++++| +..+.+..+.+ ..+......+.++.+|++|++++.++++     
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R-~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSR-SGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEES-SGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC-CccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            46899999999999999999999998 4777888 75443333222 2222223579999999999999988876     


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDET  152 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~  152 (341)
                       +.|.|||+++......     .+.++..+++|+.++.++.+++...+ ..++|++||.....+...             
T Consensus        88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~~-------------  153 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPG-------------  153 (259)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTT-------------
T ss_pred             ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCcc-------------
Confidence             3789999999766543     44456789999999999999888877 789999999987765433             


Q ss_pred             CCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhccCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccc
Q 019415          153 CYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYGSSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTL  232 (341)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (341)
                                     ...|+.+|...+.+.+.+...|++++.|.||.+.+++....        .....+...       
T Consensus       154 ---------------~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~--------~~~~~~~~~-------  203 (259)
T d2fr1a1         154 ---------------LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--------PVADRFRRH-------  203 (259)
T ss_dssp             ---------------CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC--------------------CTTT-------
T ss_pred             ---------------cHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccc--------hHHHHHHhc-------
Confidence                           46799999999998888776699999999998876542211        011111110       


Q ss_pred             cchhhccCCCCcccHHHHHHHHHHhhcCCCCCc
Q 019415          233 RDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG  265 (341)
Q Consensus       233 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g  265 (341)
                              ....+..+++++++..++.......
T Consensus       204 --------G~~~~~~~~~~~~l~~~l~~~~~~~  228 (259)
T d2fr1a1         204 --------GVIEMPPETACRALQNALDRAEVCP  228 (259)
T ss_dssp             --------TEECBCHHHHHHHHHHHHHTTCSSC
T ss_pred             --------CCCCCCHHHHHHHHHHHHhCCCceE
Confidence                    2235678999999999998765444

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.4e-17  Score=140.24  Aligned_cols=221  Identities=12%  Similarity=0.062  Sum_probs=156.3

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |+..++|++|||||++-||+++++.|+++|++|++.+| +..   +++.+...    .+++....|+.+.+.++...+  
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r-~~~---~l~~~~~~----~~~~~~~~d~~~~~~~~~~~~~~   72 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI-NES---KLQELEKY----PGIQTRVLDVTKKKQIDQFANEV   72 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-CHH---HHGGGGGS----TTEEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC-CHH---HHHHHHhc----cCCceeeeecccccccccccccc
Confidence            78778999999999999999999999999999999999 653   33333332    368889999988776665554  


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccc-cCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCA-SPLKEDGSAGYKD  147 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~-~~~~~~~~~~~~~  147 (341)
                       +.|++||+||......     .+.++..+++|+.++..+.+++..    .+ -.++|++||.... .+.          
T Consensus        73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~~----------  141 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV----------  141 (245)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC----------
T ss_pred             ccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCCc----------
Confidence             6899999999776643     556789999999999999887643    33 4699999986532 111          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                        .....|+.+|...+.+++.++ +   +|+++..+.||.+-.+..............+.+.+.
T Consensus       142 ------------------~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  203 (245)
T d2ag5a1         142 ------------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFL  203 (245)
T ss_dssp             ------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHH
T ss_pred             ------------------cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHH
Confidence                              125789999999999999887 3   489999999999966521110000000111111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEec
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTN  271 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~  271 (341)
                      ...+             ..-+...+|+++++.+++...  ...| ++.+.+
T Consensus       204 ~~~p-------------l~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDG  241 (245)
T d2ag5a1         204 KRQK-------------TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDG  241 (245)
T ss_dssp             HTCT-------------TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred             hcCC-------------CCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence            1100             334778999999999999643  3467 455544

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.79  E-value=2.9e-18  Score=146.35  Aligned_cols=227  Identities=12%  Similarity=0.081  Sum_probs=148.3

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++|.+|||||++-||+++++.|++.|++|.+.+| +....... +.+........++.++++|++++++++++++    
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGR-HAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999 76543322 2223322223469999999999988887765    


Q ss_pred             ---CCCEEEEeccCCccc---------cchhHhHhhhhhhhHHHHHHHHHHhcC--CcCEEEEeccccc-ccCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI---------DGYLYKNVVEACVGAAKKIASFCVKSG--TVKRLIYTASVLC-ASPLKEDGSA  143 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~~I~~Ss~~~-~~~~~~~~~~  143 (341)
                         ++|++||+||.....         ..+.++..+++|+.++..+.+++...-  +-..+|+++|... ..+..     
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~-----  156 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATP-----  156 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCT-----
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCC-----
Confidence               589999999964321         135577899999999988887764421  1246666666542 22211     


Q ss_pred             CCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhh---
Q 019415          144 GYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVI---  216 (341)
Q Consensus       144 ~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~---  216 (341)
                                             ....|+.+|...+.+.+.++ +   +|+++..+.||.|-.+.............   
T Consensus       157 -----------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~  213 (264)
T d1spxa_         157 -----------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFY  213 (264)
T ss_dssp             -----------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------H
T ss_pred             -----------------------CchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHH
Confidence                                   14679999999999988887 3   48999999999996553221100000000   


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC---CCCc-eEEEecc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP---SMSG-RFFCTNV  272 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~g-~~n~~~~  272 (341)
                      .....+.+.   .+          ..-+...+|+|+++.+++..+   -..| ++.+.++
T Consensus       214 ~~~~~~~~~---~P----------l~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG  260 (264)
T d1spxa_         214 STMATMKEC---VP----------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG  260 (264)
T ss_dssp             HHHHHHHHH---CT----------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHHHHhc---CC----------CCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence            011111100   00          233667899999999988532   2567 5566443

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.6e-18  Score=145.70  Aligned_cols=197  Identities=12%  Similarity=0.045  Sum_probs=146.8

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      -+++.+|||||++-||++++++|+++|++|++.+| +.++.......  +.....+++++.+|++|++.++++++     
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r-~~~~l~~~~~~--~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDI-NKHGLEETAAK--CKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHH--HHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHH--HHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999 76543333221  12234579999999999988887765     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ++|++||+||......     .+.++.++++|+.++.++.+++    .+.+ -.++|++||..+..+.          
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~----------  150 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV----------  150 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH----------
T ss_pred             cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCC----------
Confidence              5899999999766543     4556789999999999887765    3444 5799999998854432          


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c------CCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S------SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~------~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                        .....|+.||.+.+.+.+.++ +      .|+++..+.||.|--+.....            
T Consensus       151 ------------------~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~------------  200 (244)
T d1yb1a_         151 ------------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP------------  200 (244)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT------------
T ss_pred             ------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc------------
Confidence                              235789999999998888876 3      379999999998844321110            


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP  261 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  261 (341)
                           ..   +         ...++..+|+|+.+...+...
T Consensus       201 -----~~---~---------~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         201 -----ST---S---------LGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             -----HH---H---------HCCCCCHHHHHHHHHHHHHTT
T ss_pred             -----Cc---c---------ccCCCCHHHHHHHHHHHHhcC
Confidence                 00   0         123456899999998877653

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.79  E-value=7.9e-18  Score=144.20  Aligned_cols=229  Identities=13%  Similarity=0.076  Sum_probs=151.4

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|++.+| +..+..... .+.........+.++++|++++++++++++    
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r-~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGR-SSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999 765433322 222221223468999999999988877765    


Q ss_pred             ---CCCEEEEeccCCcccc---------chhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEeccc-ccccCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID---------GYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASV-LCASPLKEDGS  142 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~---------~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~-~~~~~~~~~~~  142 (341)
                         ++|++||+||......         .+.++..+++|+.++..+.+++...   + -..+|+++|. +...+..    
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~~~~----  156 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQP----  156 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSSCCC----
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccchhccccCCC----
Confidence               5899999999765321         2246788999999999888876442   1 2456666554 3222221    


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                              ....|+.+|...+.+.+.++ +   +|+++..+.||.|-.+...............
T Consensus       157 ------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~  212 (272)
T d1xkqa_         157 ------------------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKF  212 (272)
T ss_dssp             ------------------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHH
T ss_pred             ------------------------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHH
Confidence                                    14789999999999988887 3   5899999999998654211110000001111


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC--C-CCCc-eEEEecc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK--P-SMSG-RFFCTNV  272 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~-~~~g-~~n~~~~  272 (341)
                      ...........+          ..-+...+|+|+++.+++..  + -.+| ++.+.++
T Consensus       213 ~~~~~~~~~~~P----------lgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG  260 (272)
T d1xkqa_         213 YNFMASHKECIP----------IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  260 (272)
T ss_dssp             HHHHHHCTTTCT----------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHHHHhcCCC----------CCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcC
Confidence            111111111111          22366799999999998853  2 2567 5566544

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.78  E-value=1.2e-17  Score=141.98  Aligned_cols=219  Identities=14%  Similarity=0.119  Sum_probs=149.5

Q ss_pred             CCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|++|||||+|  -||+++++.|++.|++|.+..| +.......+.....   .....++++|++++++++++++    
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~-~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQ-AERLRPEAEKLAEA---LGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHHHH---TTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC-cHHHHHHHHHhhhc---cCcccccccccCCHHHHHHHHHHHHH
Confidence            578999999998  6999999999999999998888 65433333332221   2357789999999988887764    


Q ss_pred             ---CCCEEEEeccCCccc-------c--chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHI-------D--GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~-------~--~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         ++|++||+|+.....       .  ..+++..+++|+.++..+.+++...- +-.++|++||.....+..       
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~-------  155 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVP-------  155 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCT-------
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCC-------
Confidence               589999999864321       1  34456789999999999988875431 125899999987544322       


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                           ....|+.+|...+.+.+.++ +   +|+++..+.||.+..+.....   + ........
T Consensus       156 ---------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~---~-~~~~~~~~  210 (256)
T d1ulua_         156 ---------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI---P-GFTKMYDR  210 (256)
T ss_dssp             ---------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------CHHHHHH
T ss_pred             ---------------------CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccch---h-hhHHHHHH
Confidence                                 25789999999999998887 3   489999999999876643332   0 01222222


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      +....+             ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       211 ~~~~~p-------------l~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  251 (256)
T d1ulua_         211 VAQTAP-------------LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG  251 (256)
T ss_dssp             HHHHST-------------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHhcCC-------------CCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcC
Confidence            211110             223667899999999998643  2466 5555443

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.78  E-value=2e-17  Score=138.41  Aligned_cols=209  Identities=16%  Similarity=0.116  Sum_probs=148.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~d~V   83 (341)
                      ++|++|||||++-||+++++.|++.|++|.+.+| +.+      .++..     +.+++.+|+++. +.+.+.+.++|++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r-~~~------~l~~~-----~~~~~~~Dv~~~~~~~~~~~g~iD~l   70 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR-NEE------LLKRS-----GHRYVVCDLRKDLDLLFEKVKEVDIL   70 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEES-CHH------HHHHT-----CSEEEECCTTTCHHHHHHHSCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHH------HHHhc-----CCcEEEcchHHHHHHHHHHhCCCcEE
Confidence            5689999999999999999999999999999999 642      22221     456788999873 5566666789999


Q ss_pred             EEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCCCC
Q 019415           84 FHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCY  154 (341)
Q Consensus        84 i~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~  154 (341)
                      ||+||......     .+.++..+++|+.++..+.+++    ++.+ -.++|++||.....+..                
T Consensus        71 VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~----------------  133 (234)
T d1o5ia_          71 VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIE----------------  133 (234)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT----------------
T ss_pred             EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-ccccccccccccccccc----------------
Confidence            99999655432     5556788999999988887776    3344 46899999987444221                


Q ss_pred             CCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccc
Q 019415          155 TPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQ  230 (341)
Q Consensus       155 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (341)
                                  ....|+.+|...+.+.+.++    .+|+++..+.||.+-.+.....     ........+....+   
T Consensus       134 ------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~-----~~~~~~~~~~~~~p---  193 (234)
T d1o5ia_         134 ------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKEL-----LSEEKKKQVESQIP---  193 (234)
T ss_dssp             ------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH-----SCHHHHHHHHTTST---
T ss_pred             ------------ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhh-----cCHHHHHHHHhcCC---
Confidence                        25789999999998888876    3489999999999865432111     01111111211110   


Q ss_pred             cccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          231 TLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       231 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                                ..-+...+|+|.++.+++...  -..| ++.+.++
T Consensus       194 ----------l~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  228 (234)
T d1o5ia_         194 ----------MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG  228 (234)
T ss_dssp             ----------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----------CCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcc
Confidence                      334677999999999988642  2456 5566544

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.78  E-value=1.1e-17  Score=142.24  Aligned_cols=226  Identities=18%  Similarity=0.094  Sum_probs=152.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .+|++|||||++-||.++++.|++.|++|++..| +...  ..+.. ..+.....+++++++|++|+++++++++     
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~-~~~~--~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYG-SSSK--AAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcC-CChH--HHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999998766 4332  22221 1112233478999999999988877765     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                        ++|++||+||......     .+.++..+++|+.+...+++++...- +-.++++++|........            
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~------------  149 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI------------  149 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC------------
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCC------------
Confidence              5899999999765432     56678999999999999988876542 124666666654322111            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCC-------CCCCCCCchhhhhH
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTN-------LPYSSTPVSVIGGL  219 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~-------~~~~~~~~~~~~~~  219 (341)
                                     .....|+.+|...+.+.+.++ +   .|+++..|.||.+-.+..       ............+.
T Consensus       150 ---------------~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  214 (259)
T d1ja9a_         150 ---------------PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKID  214 (259)
T ss_dssp             ---------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHH
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHH
Confidence                           114689999999999888887 3   489999999999854310       00000001112222


Q ss_pred             hhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 019415          220 CQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNVF  273 (341)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~~  273 (341)
                      ..+....+             ..-+...+|+++++.+++....  .+| ++.+.+|.
T Consensus       215 ~~~~~~~p-------------l~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         215 EGLANMNP-------------LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHTST-------------TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHhCCC-------------CCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            22222211             3346779999999999997543  456 56665553

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.77  E-value=7.5e-18  Score=143.45  Aligned_cols=226  Identities=16%  Similarity=0.118  Sum_probs=153.9

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++|++|||||++-||+++++.|++.|++|++.+| +..+.... +.+..  ....++.++++|++++++++++++    
T Consensus         7 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~~~~~~~~~~~--~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYR-SAADAVEVTEKVGK--EFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEES-SCTTHHHHHHHHHH--HHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHHH--HhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999 77653322 22222  112478899999999998887765    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHh----cCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVK----SGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+|+......     .+.+++.+++|+.++..+.+++..    .+.-..++..||.........       
T Consensus        84 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~-------  156 (260)
T d1h5qa_          84 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-------  156 (260)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-------
T ss_pred             HhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc-------
Confidence               5899999998755432     556788999999999888776533    232456666666553221110       


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                       ...             .......|+.+|...+.+.+.++    .+|+++..+.||.+-.+.....      .+......
T Consensus       157 -~~~-------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~------~~~~~~~~  216 (260)
T d1h5qa_         157 -SLN-------------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM------DKKIRDHQ  216 (260)
T ss_dssp             -ETT-------------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS------CHHHHHHH
T ss_pred             -ccc-------------cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc------CHHHHHHH
Confidence             000             00124789999999999988876    3589999999999965432221      22222222


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....+             ..-+...+|+|+++.+++...  -..| ++.+.++
T Consensus       217 ~~~~p-------------l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         217 ASNIP-------------LNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  256 (260)
T ss_dssp             HHTCT-------------TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HhcCC-------------CCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence            22111             223667899999999988543  2466 5666554

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.77  E-value=7.6e-18  Score=144.55  Aligned_cols=222  Identities=15%  Similarity=0.120  Sum_probs=150.7

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      |. .++|++|||||++-||+++++.|++.|++|.+.+| +.+.   ++.+..  .....+..+.+|++++++++++++  
T Consensus         1 M~-L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r-~~~~---l~~~~~--~~~~~~~~~~~Dv~~~~~~~~~~~~~   73 (276)
T d1bdba_           1 MK-LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDK-SAER---LAELET--DHGDNVLGIVGDVRSLEDQKQAASRC   73 (276)
T ss_dssp             CT-TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHH--HHGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CC-CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CHHH---HHHHHH--HcCCCeeEEecccccHHHHHHHHHHH
Confidence            55 35799999999999999999999999999999999 7543   222222  112478999999999988777754  


Q ss_pred             -----CCCEEEEeccCCcccc----------chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCC
Q 019415           79 -----GCDFVFHVATPLQHID----------GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKE  139 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~----------~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~  139 (341)
                           ++|++||+||......          .+.++..+++|+.++..+.+++.    +.+  .++|++||.....+...
T Consensus        74 ~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~~~~  151 (276)
T d1bdba_          74 VARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYPNGG  151 (276)
T ss_dssp             HHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSTTSS
T ss_pred             HHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccCCCC
Confidence                 6899999999654321          12367889999999998877763    333  68999998765443221


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c--CCceEEEEecCceeCCCCCCCC--CCCc-
Q 019415          140 DGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S--SGLEVVALALGVVAGDTNLPYS--STPV-  213 (341)
Q Consensus       140 ~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~--~~~~~~vlRp~~v~G~~~~~~~--~~~~-  213 (341)
                                                  ...|+.+|...+.+.+.++ +  .++++..+.||.|-.+......  .... 
T Consensus       152 ----------------------------~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~  203 (276)
T d1bdba_         152 ----------------------------GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKA  203 (276)
T ss_dssp             ----------------------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC-----
T ss_pred             ----------------------------CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhc
Confidence                                        4689999999999998887 4  2699999999998655322110  0000 


Q ss_pred             -hhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC---CCCCc-eEEEecc
Q 019415          214 -SVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK---PSMSG-RFFCTNV  272 (341)
Q Consensus       214 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~g-~~n~~~~  272 (341)
                       ....+...+....+             ..-+...+|+|.++.+++..   ....| ++++.++
T Consensus       204 ~~~~~~~~~~~~~~P-------------lgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG  254 (276)
T d1bdba_         204 ISTVPLADMLKSVLP-------------IGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGG  254 (276)
T ss_dssp             ----CHHHHHTTTCT-------------TSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred             cCcHHHHHHHHhcCC-------------CCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence             00111111111100             22255689999999887742   23567 5666443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.77  E-value=8e-17  Score=137.98  Aligned_cols=228  Identities=14%  Similarity=0.020  Sum_probs=151.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh-hhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL-KSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      ++|++|||||++-||+++++.|++.|++|++.+| +...  ..+.+ ..+......+.++.+|+++++++.+.++     
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~-~~~~--~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYA-NSTE--SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEES-SCHH--HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC-CchH--HHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999888 6432  12211 1122223579999999999988877765     


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                        ++|++||+++......     .+.++..+++|+.++..+.+++...- +-.+.++++|.....+..            
T Consensus        94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~------------  161 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV------------  161 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC------------
T ss_pred             hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccc------------
Confidence              5899999999765543     55667889999999999998886542 135777887764322111            


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCc
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNE  226 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  226 (341)
                                     .....|+.+|...+.+.+.++ +   +|+++..|.||.+-.+.          ...+........
T Consensus       162 ---------------~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~----------~~~~~~~~~~~~  216 (272)
T d1g0oa_         162 ---------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM----------YHAVCREYIPNG  216 (272)
T ss_dssp             ---------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH----------HHHHGGGGSTTC
T ss_pred             ---------------cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChH----------HHHHHHhhhhcc
Confidence                           124779999999999998877 3   59999999999995431          111111000000


Q ss_pred             ccccccc----chhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          227 YVYQTLR----DTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       227 ~~~~~~~----~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .......    ..-......-+...+|+|.++.+++....  .+| ++.+.+|
T Consensus       217 ~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG  269 (272)
T d1g0oa_         217 ENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  269 (272)
T ss_dssp             TTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCC
Confidence            0000000    00000002337789999999999996433  466 5555544

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.3e-18  Score=145.69  Aligned_cols=168  Identities=19%  Similarity=0.134  Sum_probs=128.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEE---ecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTT---LRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~---~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      +|.||||||++-||+++++.|++.|.+|+.+   .| +......+. ....+......+.++.+|++|++++.++++   
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLR-DLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEES-CGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecC-ChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence            3668899999999999999999999875544   45 443333332 223333445689999999999999988875   


Q ss_pred             --CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCC
Q 019415           79 --GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKD  147 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~  147 (341)
                        ..|++||+|+......     .+.++..+++|+.++.++.+++    ++.+ -.++|++||..+..+...        
T Consensus        81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~--------  151 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPF--------  151 (285)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTT--------
T ss_pred             ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCC--------
Confidence              4899999998766543     5667889999999998887775    4445 579999999876554322        


Q ss_pred             CCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCC
Q 019415          148 SIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGD  203 (341)
Q Consensus       148 ~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~  203 (341)
                                          ...|+.||...+.+.+.++ +   +|+++..+.||.|--+
T Consensus       152 --------------------~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~  191 (285)
T d1jtva_         152 --------------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA  191 (285)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred             --------------------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCCh
Confidence                                4789999999999888887 3   4999999999999654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.75  E-value=6.8e-17  Score=140.12  Aligned_cols=222  Identities=11%  Similarity=0.078  Sum_probs=149.0

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh-hhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK-VDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      .++|++|||||+|-||+++++.|++.|++|++.+| +..+... .+.+...  ....+.++.+|++++++++++++    
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r-~~~~l~~~~~~l~~~--~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASR-KMDVLKATAEQISSQ--TGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHHHH--HSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEEC-CHHHHHHHHHHHHHh--cCCceEEEEecccChHHHHHHhhhhhh
Confidence            46789999999999999999999999999999999 7644222 2222221  12478899999999988876654    


Q ss_pred             ---CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYK  146 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~  146 (341)
                         ++|++||+|+......     ...+...+.+|..+...+...+    ........++.+||.....+..        
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~--------  171 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG--------  171 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT--------
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhccc--------
Confidence               6899999999765543     3445577788877777665443    2222245677777765443221        


Q ss_pred             CCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          147 DSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       147 ~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                          ....|+.+|...+.+.+.++ +   +|+++..|.||.|-.+.....  ... ........
T Consensus       172 --------------------~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~-~~~~~~~~  228 (294)
T d1w6ua_         172 --------------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR--LDP-TGTFEKEM  228 (294)
T ss_dssp             --------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--------CCT-TSHHHHHH
T ss_pred             --------------------ccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhc--cCC-cHHHHHHH
Confidence                                14679999999999999887 3   489999999999976643322  100 11111222


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ....+             ..-+...+|+|+++.+++...  ...| ++.+.+|
T Consensus       229 ~~~~p-------------l~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG  268 (294)
T d1w6ua_         229 IGRIP-------------CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGG  268 (294)
T ss_dssp             HTTCT-------------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhcCC-------------CCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            11110             233667899999999999643  2567 6666555

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=4.9e-17  Score=138.35  Aligned_cols=169  Identities=14%  Similarity=0.121  Sum_probs=129.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHH---CCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhc--
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLD---KGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQ--   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--   78 (341)
                      ++|.++||||++-||.++++.|++   .|++|++++| +.+...... .+... ....++.++++|++++++++++++  
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r-~~~~l~~~~~~l~~~-~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSAR-SESMLRQLKEELGAQ-QPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEES-CHHHHHHHHHHHHHH-CTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEEC-CHHHHHHHHHHHHhh-cCCceEEEEEccCCCHHHHHHHHHHH
Confidence            567899999999999999999986   6999999999 765433322 22221 122478999999999988887753  


Q ss_pred             ---------CCCEEEEeccCCccc------c--chhHhHhhhhhhhHHHHHHHHHHhcC-----CcCEEEEecccccccC
Q 019415           79 ---------GCDFVFHVATPLQHI------D--GYLYKNVVEACVGAAKKIASFCVKSG-----TVKRLIYTASVLCASP  136 (341)
Q Consensus        79 ---------~~d~Vi~~a~~~~~~------~--~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~~I~~Ss~~~~~~  136 (341)
                               ..|++||+||.....      .  .+.++..+++|+.++..+.+++...-     .-.++|++||.....+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence                     357999999864321      1  34567899999999999999886552     1248999999876543


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc--cCCceEEEEecCceeCC
Q 019415          137 LKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG--SSGLEVVALALGVVAGD  203 (341)
Q Consensus       137 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~~~~~~~vlRp~~v~G~  203 (341)
                      ...                            ...|+.||...+.+.+.++  ..|+++..+.||.|..+
T Consensus       163 ~~~----------------------------~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~  203 (259)
T d1oaaa_         163 YKG----------------------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND  203 (259)
T ss_dssp             CTT----------------------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred             Ccc----------------------------chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence            222                            5789999999999999998  45999999999999654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4e-16  Score=131.82  Aligned_cols=210  Identities=15%  Similarity=0.089  Sum_probs=145.5

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      -++|.+|||||++-||.+++++|++.|++|++++| +.+......  +.+   .........|+.+.+..+....     
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r-~~~~~~~~~--~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDL-PNSGGEAQA--KKL---GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-TTSSHHHHH--HHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC-ChHHHHHHH--HHh---CCCcccccccccccccccccccccccc
Confidence            46899999999999999999999999999999999 765433221  121   2367888999998766554443     


Q ss_pred             --CCCEEEEeccCCcccc-----------chhHhHhhhhhhhHHHHHHHHHHhcC---------CcCEEEEecccccccC
Q 019415           79 --GCDFVFHVATPLQHID-----------GYLYKNVVEACVGAAKKIASFCVKSG---------TVKRLIYTASVLCASP  136 (341)
Q Consensus        79 --~~d~Vi~~a~~~~~~~-----------~~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~~I~~Ss~~~~~~  136 (341)
                        ..|.+++.++......           .+.++..+++|+.++.++.+++...-         .-.++|++||.....+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~  156 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  156 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC
Confidence              5788888876433211           34567889999999999998875430         1248999999986554


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCC
Q 019415          137 LKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTP  212 (341)
Q Consensus       137 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~  212 (341)
                      ...                            ...|+.+|...+.+.+.++ +   +|+++..+.||.+..+.....    
T Consensus       157 ~~~----------------------------~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~----  204 (248)
T d2o23a1         157 QVG----------------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL----  204 (248)
T ss_dssp             CTT----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC---------
T ss_pred             CCC----------------------------chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC----
Confidence            322                            5789999999999999987 3   489999999999865532221    


Q ss_pred             chhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc
Q 019415          213 VSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG  265 (341)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g  265 (341)
                        .......+....+.            ..-+...+|+|+++.++++.+-.+|
T Consensus       205 --~~~~~~~~~~~~pl------------~~R~g~peevA~~v~fL~s~~~itG  243 (248)
T d2o23a1         205 --PEKVCNFLASQVPF------------PSRLGDPAEYAHLVQAIIENPFLNG  243 (248)
T ss_dssp             -------CHHHHTCSS------------SCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             --CHHHHHHHHhcCCC------------CCCCcCHHHHHHHHHHHHhCCCCCc
Confidence              11122222111110            1225678999999999987554555

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.74  E-value=2.2e-17  Score=139.74  Aligned_cols=212  Identities=14%  Similarity=0.125  Sum_probs=146.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-------CC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-------GC   80 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   80 (341)
                      ++|||||++-||..+++.|++.|++|.+.+| +......++....        .+..+|++++++++++++       ++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r-~~~~~~~~~~~~~--------~~~~~dv~~~~~~~~~~~~~~~~~G~i   72 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDE-SFKQKDELEAFAE--------TYPQLKPMSEQEPAELIEAVTSAYGQV   72 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCG-GGGSHHHHHHHHH--------HCTTSEECCCCSHHHHHHHHHHHHSCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHhhhC--------cEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999998 7665444433322        234577777665555543       68


Q ss_pred             CEEEEeccCCcc-cc-----chhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCCC
Q 019415           81 DFVFHVATPLQH-ID-----GYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSID  150 (341)
Q Consensus        81 d~Vi~~a~~~~~-~~-----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~  150 (341)
                      |++||+|+.... ..     .++++..+++|+.++..+.+++    ++.+ -.++|++||.....+...           
T Consensus        73 DiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~-----------  140 (252)
T d1zmta1          73 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKE-----------  140 (252)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTT-----------
T ss_pred             CEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccccccc-----------
Confidence            999999986432 21     4567788999999998887775    3444 479999999875443221           


Q ss_pred             CCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCch----hhhhHhhH
Q 019415          151 ETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVS----VIGGLCQL  222 (341)
Q Consensus       151 E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~----~~~~~~~~  222 (341)
                                       ...|+.+|...+.+.+.++    .+|+++..+.||.+-.+.....  .+..    .+.....+
T Consensus       141 -----------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~e~~~~~  201 (252)
T d1zmta1         141 -----------------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYF--YPTEPWKTNPEHVAHV  201 (252)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSS--CBHHHHTTCHHHHHHH
T ss_pred             -----------------ccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhh--hhcccccCCHHHHHHH
Confidence                             4789999999999988887    3489999999999977643332  1100    01111111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .+..+             ..-+...+|+|+++.+++....  ..| ++.+.++
T Consensus       202 ~~~~p-------------l~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG  241 (252)
T d1zmta1         202 KKVTA-------------LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  241 (252)
T ss_dssp             HHHSS-------------SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             HhcCC-------------CCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            11100             2236679999999999996543  456 5566544

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.73  E-value=1.2e-16  Score=135.11  Aligned_cols=168  Identities=20%  Similarity=0.224  Sum_probs=126.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHH---CCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLD---KGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ||+||||||++-||.+++++|++   .|++|++.+| +.++...+..+...   ..++.++.+|++|+++++++++    
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~i~~   77 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCR-NREQAKELEDLAKN---HSNIHILEIDLRNFDAYDKLVADIEG   77 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEES-CTTSCHHHHHHHHH---CTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHHHHhc---CCcEEEEEEEeccHHHHHHHHhhhHH
Confidence            57899999999999999999974   6899999999 88765554443332   2489999999999987776543    


Q ss_pred             -----CCCEEEEeccCCcccc------chhHhHhhhhhhhHHHHHHHHHHhc---------------CCcCEEEEecccc
Q 019415           79 -----GCDFVFHVATPLQHID------GYLYKNVVEACVGAAKKIASFCVKS---------------GTVKRLIYTASVL  132 (341)
Q Consensus        79 -----~~d~Vi~~a~~~~~~~------~~~~~~~~~~nv~~~~~l~~~~~~~---------------~~~~~~I~~Ss~~  132 (341)
                           ++|++||+||......      .+.++..+++|+.++..+.+++...               + -.++|++||..
T Consensus        78 ~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~-~g~ii~i~S~~  156 (248)
T d1snya_          78 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVG-RAAIINMSSIL  156 (248)
T ss_dssp             HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTT-TCEEEEECCGG
T ss_pred             HhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccc-ccccccccccc
Confidence                 4899999999754321      3446788999999999888775321               2 36899999975


Q ss_pred             cccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCC
Q 019415          133 CASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGD  203 (341)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~  203 (341)
                      .......                         ......|+.||.....+.+.++    +.|+++..+.||.|--+
T Consensus       157 g~~~~~~-------------------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         157 GSIQGNT-------------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             GCSTTCC-------------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             cccCCCC-------------------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            3321111                         0124689999999998888876    34899999999998544

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=1.8e-17  Score=143.62  Aligned_cols=165  Identities=16%  Similarity=0.025  Sum_probs=123.7

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc------hhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED------KSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      .++|++|||||++-||+++++.|+++|++|++.+| +...      ....+.+...  .........+|+.+.+..++++
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDL-GGDFKGVGKGSSAADKVVEE--IRRRGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-CBCTTSCBCCSHHHHHHHHH--HHHTTCEEEEECCCGGGHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC-CchhhhhhhhHHHHHHHHHH--HhhcccccccccchHHHHHHHH
Confidence            35789999999999999999999999999999887 6432      1122221110  0113345667888876655554


Q ss_pred             c-------CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHH----hcCCcCEEEEecccccccCCCCCC
Q 019415           78 Q-------GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCV----KSGTVKRLIYTASVLCASPLKEDG  141 (341)
Q Consensus        78 ~-------~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~~I~~Ss~~~~~~~~~~~  141 (341)
                      +       ++|++||+||......     .+.++..+++|+.++..+.+++.    +.+ -.++|++||..+..+...  
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~~--  158 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFG--  158 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT--
T ss_pred             HHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCCC--
Confidence            3       6999999999766543     55678999999999999888753    344 479999999987664332  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCce
Q 019415          142 SAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVV  200 (341)
Q Consensus       142 ~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v  200 (341)
                                                ...|+.||...+.+.+.++ +   +|+++..+.||.+
T Consensus       159 --------------------------~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~  195 (302)
T d1gz6a_         159 --------------------------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  195 (302)
T ss_dssp             --------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             --------------------------cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence                                      4789999999999988887 3   4899999999876

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=2.2e-15  Score=128.00  Aligned_cols=219  Identities=14%  Similarity=0.072  Sum_probs=149.2

Q ss_pred             CCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|+||||||+|  -||+++++.|++.|++|++.+| +.......+.+...   .....+...|+.+..+....+.    
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQ-NDKLKGRVEEFAAQ---LGSDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES-STTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeC-CHHHHHHHHHHHhh---cCCcceeecccchHHHHHHHHHHhhh
Confidence            578999999998  6999999999999999999999 76544443333322   2356788889998876666653    


Q ss_pred             ---CCCEEEEeccCCcccc----------chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID----------GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAG  144 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~----------~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~  144 (341)
                         ..|++||+|+......          .+.+......|+.+...+.+++...- +-..+|++||.....+.+      
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~------  153 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIP------  153 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT------
T ss_pred             cccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCC------
Confidence               4799999998754322          22234567778888888888776542 135688888876544321      


Q ss_pred             CCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHh
Q 019415          145 YKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLC  220 (341)
Q Consensus       145 ~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~  220 (341)
                                            ....|+.+|...+.+.+.++    .+|+++..++||.|..+.....   .. ......
T Consensus       154 ----------------------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~---~~-~~~~~~  207 (258)
T d1qsga_         154 ----------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI---KD-FRKMLA  207 (258)
T ss_dssp             ----------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS---TT-HHHHHH
T ss_pred             ----------------------CcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc---ch-hhhHHH
Confidence                                  14679999999999998887    3589999999999976643322   00 111111


Q ss_pred             hHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          221 QLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...+..   +          ..-+...+|+|+++.+++...  ...| ++.+.++
T Consensus       208 ~~~~~~---p----------l~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG  249 (258)
T d1qsga_         208 HCEAVT---P----------IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  249 (258)
T ss_dssp             HHHHHS---T----------TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHhCC---C----------CCCCcCHHHHHHHHHHHhCchhcCccCceEEECcC
Confidence            111110   0          223677999999999999643  3567 4555444

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=1.8e-15  Score=126.55  Aligned_cols=197  Identities=11%  Similarity=0.008  Sum_probs=137.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHH-------Hh
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFEN-------AI   77 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-------~~   77 (341)
                      ++|+||||||+|-||+++++.|+++|++|.+++| +...            ..........|..+.+....       .+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDV-VENE------------EASASVIVKMTDSFTEQADQVTAEVGKLL   67 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-SCCT------------TSSEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeC-Cccc------------cccccceeecccCcHHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999888 5532            11233445555555433322       22


Q ss_pred             c--CCCEEEEeccCCccc---c---chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCC
Q 019415           78 Q--GCDFVFHVATPLQHI---D---GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDS  148 (341)
Q Consensus        78 ~--~~d~Vi~~a~~~~~~---~---~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~  148 (341)
                      .  ++|++||+||.....   .   .+.++..+++|+.++.++.+++...- .-.++|++||..+..+...         
T Consensus        68 ~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~---------  138 (236)
T d1dhra_          68 GDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG---------  138 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT---------
T ss_pred             CCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC---------
Confidence            2  479999999853321   1   34467789999999999988876531 1368999999875443222         


Q ss_pred             CCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhH
Q 019415          149 IDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQL  222 (341)
Q Consensus       149 ~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~  222 (341)
                                         ...|+.||...+.+.+.++ +     .|+++..+.||.+..+.              .+..
T Consensus       139 -------------------~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~--------------~~~~  185 (236)
T d1dhra_         139 -------------------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM--------------NRKS  185 (236)
T ss_dssp             -------------------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH--------------HHHH
T ss_pred             -------------------CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc--------------chhh
Confidence                               4789999999999999987 4     37999999999995541              1111


Q ss_pred             hcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEE
Q 019415          223 TNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFC  269 (341)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~  269 (341)
                      ....      +       .-.++..+++++.+..++....  ..| .+.+
T Consensus       186 ~~~~------~-------~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         186 MPEA------D-------FSSWTPLEFLVETFHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             STTS------C-------GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             Cccc------h-------hhcCCCHHHHHHHHHHHhCCCccCCCCCeEEE
Confidence            1110      0       2236778999999999886533  345 4443

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.68  E-value=1.2e-15  Score=127.73  Aligned_cols=196  Identities=16%  Similarity=0.082  Sum_probs=134.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHH-------HHh-
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFE-------NAI-   77 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-------~~~-   77 (341)
                      ..|||||||+|-||++++++|++.|++|++++| +...            .........+|..+.+...       ..+ 
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDL-SAND------------QADSNILVDGNKNWTEQEQSILEQTASSLQ   68 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEES-SCCT------------TSSEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEC-Cchh------------cccccceeccccCchhHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999 6542            1123445566766543322       222 


Q ss_pred             -cCCCEEEEeccCCcccc------chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           78 -QGCDFVFHVATPLQHID------GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        78 -~~~d~Vi~~a~~~~~~~------~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       .++|++||+||......      .+.++..+++|+.++..+.+++...- .-.++|++||.....+...          
T Consensus        69 ~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~----------  138 (235)
T d1ooea_          69 GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS----------  138 (235)
T ss_dssp             TCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT----------
T ss_pred             CCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc----------
Confidence             24899999999643321      34466789999999988888876541 1258999999876554322          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCceeCCCCCCCCCCCchhhhhHhhHh
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQLT  223 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~  223 (341)
                                        ...|+.||...+.+.+.++ +     .++++..+.|+.+-.+              +.+...
T Consensus       139 ------------------~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~--------------~~~~~~  186 (235)
T d1ooea_         139 ------------------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP--------------MNRKWM  186 (235)
T ss_dssp             ------------------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH--------------HHHHHS
T ss_pred             ------------------ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc--------------chhhhC
Confidence                              5789999999999999986 4     2678888999988332              111111


Q ss_pred             cCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC---CCCc-eEEE
Q 019415          224 NNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP---SMSG-RFFC  269 (341)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~g-~~n~  269 (341)
                      ...      +       ...++..+|+++.++..+..+   ...| .+.+
T Consensus       187 ~~~------~-------~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         187 PNA------D-------HSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             TTC------C-------GGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             cCC------c-------cccCCCHHHHHHHHHHHhcCccccCCCceEEEE
Confidence            110      0       234677899999987655432   2456 4455

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.68  E-value=1.9e-15  Score=127.71  Aligned_cols=168  Identities=16%  Similarity=0.156  Sum_probs=121.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      |+||||||++-||.+++++|+++|+  .|++..| +.++   .+.+...  ...+++++.+|++++++++++++      
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R-~~~~---~~~l~~~--~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR-DVEK---ATELKSI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEES-SGGG---CHHHHTC--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeC-CHHH---HHHHHHh--hCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            6999999999999999999999995  6888888 7644   3333332  23579999999999987776653      


Q ss_pred             ---CCCEEEEeccCCccc----c--chhHhHhhhhhhhHHHHHHHHHHh----cC----------CcCEEEEeccccccc
Q 019415           79 ---GCDFVFHVATPLQHI----D--GYLYKNVVEACVGAAKKIASFCVK----SG----------TVKRLIYTASVLCAS  135 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~----~--~~~~~~~~~~nv~~~~~l~~~~~~----~~----------~~~~~I~~Ss~~~~~  135 (341)
                         ++|++||+||.....    .  .+.+++.+++|+.++..+.+++..    .+          ...+++.+|+.....
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~  157 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence               389999999975431    1  445678999999999998877632    11          124778888765333


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCcee
Q 019415          136 PLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVA  201 (341)
Q Consensus       136 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~  201 (341)
                      ....          ....           ..+...|+.||.....+.+.++ +   .|+++..+.||.|-
T Consensus       158 ~~~~----------~~~~-----------~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~  206 (250)
T d1yo6a1         158 TDNT----------SGSA-----------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ  206 (250)
T ss_dssp             TTCC----------STTS-----------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred             cCCc----------cccc-----------chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCC
Confidence            2211          1110           1234679999999999988887 3   48999999999884

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.67  E-value=2.7e-15  Score=126.01  Aligned_cols=205  Identities=18%  Similarity=0.118  Sum_probs=141.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------CC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------GC   80 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------~~   80 (341)
                      |++|||||++-||+++++.|++.|++|++.+| +.+.              .+....++|+.+......+..      ..
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~-~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   66 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDL-RREG--------------EDLIYVEGDVTREEDVRRAVARAQEEAPL   66 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES-SCCS--------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-Cccc--------------ccceEeeccccchhhhHHHHHhhhccccc
Confidence            68999999999999999999999999999999 6543              356788999998766555543      34


Q ss_pred             CEEEEeccCCcc---------ccchhHhHhhhhhhhHHHHHHHHHHhc---------CCcCEEEEecccccccCCCCCCC
Q 019415           81 DFVFHVATPLQH---------IDGYLYKNVVEACVGAAKKIASFCVKS---------GTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        81 d~Vi~~a~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                      +.+++.++....         ...+.++..++.|+.+...+...+...         +.-.++|++||.....+...   
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~---  143 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG---  143 (241)
T ss_dssp             EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT---
T ss_pred             cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCC---
Confidence            455555443221         113455678899999988887766432         11358999999876554322   


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                                               ...|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....      ....
T Consensus       144 -------------------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~------~~~~  192 (241)
T d1uaya_         144 -------------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL------PEKA  192 (241)
T ss_dssp             -------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS------CHHH
T ss_pred             -------------------------chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh------hhhH
Confidence                                     5789999999999998887 3   589999999999965432221      1111


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPSMSG-RFFCTNV  272 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~g-~~n~~~~  272 (341)
                      ........+.            ..-+...+|+|+++.+++..+..+| ++.+.++
T Consensus       193 ~~~~~~~~~~------------~~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG  235 (241)
T d1uaya_         193 KASLAAQVPF------------PPRLGRPEEYAALVLHILENPMLNGEVVRLDGA  235 (241)
T ss_dssp             HHHHHTTCCS------------SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHhcCCC------------CCCCcCHHHHHHHHHHHHhCCCCCCCEEEECCc
Confidence            1122111111            1225568999999999988655677 5566444

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.5e-15  Score=128.25  Aligned_cols=166  Identities=16%  Similarity=0.101  Sum_probs=124.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc------
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ------   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   78 (341)
                      ++|++|||||++-||.++++.|++.|++|++++| +.++.+....... ......+.++.+|..+.+.....+.      
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r-~~~~l~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTAR-SKETLQKVVSHCL-ELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHH-HHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHHHh-hhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999999 7655333322111 1123478889999998766555433      


Q ss_pred             -CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhc---CCcCEEEEecccccccCCCCCCCCCCCCCC
Q 019415           79 -GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKS---GTVKRLIYTASVLCASPLKEDGSAGYKDSI  149 (341)
Q Consensus        79 -~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~  149 (341)
                       ..|+++++|+......     .+.++..+++|+.++..+.+++...   + -.++|++||.....+...          
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~----------  159 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPM----------  159 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTT----------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCC----------
Confidence             6899999998755432     4455688999999998887776321   2 268999999876553322          


Q ss_pred             CCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-----CCceEEEEecCcee
Q 019415          150 DETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-----SGLEVVALALGVVA  201 (341)
Q Consensus       150 ~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-----~~~~~~vlRp~~v~  201 (341)
                                        ...|+.||...+.+.+.++ +     .++++..+.||.|-
T Consensus       160 ------------------~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~  199 (269)
T d1xu9a_         160 ------------------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID  199 (269)
T ss_dssp             ------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred             ------------------chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCC
Confidence                              5799999999999888886 4     26889999999883

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.62  E-value=3.8e-14  Score=121.27  Aligned_cols=219  Identities=13%  Similarity=0.063  Sum_probs=138.8

Q ss_pred             CCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|++|||||+|  -||.++++.|++.|++|++.+| +....+..+.+...   .....+...|++++++..++++    
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r-~~~~~~~~~~l~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYL-NESLEKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEES-STTTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeC-CHHHHHHHHHHHhh---CCceeEeeecccchhhHHHHHHHHHH
Confidence            578999999987  6999999999999999999999 75543444444332   2366789999999887776663    


Q ss_pred             ---CCCEEEEeccCCcccc------chhHhHh---hhhhhhHHHHHHHHHHhcCCcCE-EEEecccccccCCCCCCCCCC
Q 019415           79 ---GCDFVFHVATPLQHID------GYLYKNV---VEACVGAAKKIASFCVKSGTVKR-LIYTASVLCASPLKEDGSAGY  145 (341)
Q Consensus        79 ---~~d~Vi~~a~~~~~~~------~~~~~~~---~~~nv~~~~~l~~~~~~~~~~~~-~I~~Ss~~~~~~~~~~~~~~~  145 (341)
                         .+|++||+++......      .......   ...+......+.....+..+... ++..|+.+...+.        
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~--------  151 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM--------  151 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC--------
T ss_pred             HcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc--------
Confidence               6899999999654422      1111122   22223334444444433322334 4444444422211        


Q ss_pred             CCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCCCCCCchhhhhHhh
Q 019415          146 KDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPYSSTPVSVIGGLCQ  221 (341)
Q Consensus       146 ~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~  221 (341)
                                          .....|+.+|...+.+.+.++    ..|+++..+.||.+..+.....  ..  .......
T Consensus       152 --------------------~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~--~~--~~~~~~~  207 (274)
T d2pd4a1         152 --------------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI--AD--FRMILKW  207 (274)
T ss_dssp             --------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS--TT--HHHHHHH
T ss_pred             --------------------ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccccc--Cc--hHHHHHH
Confidence                                124689999999999988876    3589999999999876643322  00  1111111


Q ss_pred             HhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          222 LTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .....    +         ..-+...+|+|.++.+++....  .+| ++.+.++
T Consensus       208 ~~~~~----p---------~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG  248 (274)
T d2pd4a1         208 NEINA----P---------LRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  248 (274)
T ss_dssp             HHHHS----T---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Hhhhh----h---------ccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCC
Confidence            11110    0         3446779999999999987532  466 5666554

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.4e-15  Score=130.33  Aligned_cols=189  Identities=16%  Similarity=0.109  Sum_probs=126.0

Q ss_pred             CCcEE-EEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhh-hHhhhCCCCCCceEEEecCCCChHHHHHHhc---
Q 019415            5 SNFKV-CVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKV-DLLKSLPGAETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         5 ~~~~i-lI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      ++|+| |||||++-||.++++.|+++ |+.|++..| +.++.... +.+..   ....++++++|+++.++++++++   
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r-~~~~~~~~~~~l~~---~~~~~~~~~~Dvs~~~sv~~~~~~~~   76 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTAR-DVTRGQAAVQQLQA---EGLSPRFHQLDIDDLQSIRALRDFLR   76 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEES-SHHHHHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEEC-CHHHHHHHHHHHHh---cCCcEEEEEEecCCHHHHHHHHHHHH
Confidence            35676 89999999999999999986 899999999 77553322 22332   23478999999999988776654   


Q ss_pred             ----CCCEEEEeccCCcccc-----chhHhHhhhhhhhHHHHHHHHHHhcC-CcCEEEEecccccccCCCCCCCCC----
Q 019415           79 ----GCDFVFHVATPLQHID-----GYLYKNVVEACVGAAKKIASFCVKSG-TVKRLIYTASVLCASPLKEDGSAG----  144 (341)
Q Consensus        79 ----~~d~Vi~~a~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~~I~~Ss~~~~~~~~~~~~~~----  144 (341)
                          ++|++||+||......     .+.++..+++|+.++..+.+++...- .-.++|++||.....+........    
T Consensus        77 ~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~  156 (275)
T d1wmaa1          77 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKF  156 (275)
T ss_dssp             HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             HhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhh
Confidence                6899999999765433     33456789999999999999886531 125899999976543211100000    


Q ss_pred             CCCCCCC---------------CCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c-------CCceEEEEecCcee
Q 019415          145 YKDSIDE---------------TCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S-------SGLEVVALALGVVA  201 (341)
Q Consensus       145 ~~~~~~E---------------~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~-------~~~~~~vlRp~~v~  201 (341)
                      ......+               ......      ...+...|+.||.....+.+.++ +       .++++..+.||.|-
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~  230 (275)
T d1wmaa1         157 RSETITEEELVGLMNKFVEDTKKGVHQK------EGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR  230 (275)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTT------TTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred             cccccchhhhccccccchhccccccccc------CCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence            0000000               000000      11234679999998877665443 1       38999999999985


Q ss_pred             CC
Q 019415          202 GD  203 (341)
Q Consensus       202 G~  203 (341)
                      -+
T Consensus       231 T~  232 (275)
T d1wmaa1         231 TD  232 (275)
T ss_dssp             ST
T ss_pred             CC
Confidence            43

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.59  E-value=5.6e-14  Score=119.77  Aligned_cols=228  Identities=8%  Similarity=-0.047  Sum_probs=140.3

Q ss_pred             CCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc----
Q 019415            5 SNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ----   78 (341)
Q Consensus         5 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----   78 (341)
                      ++|++|||||+|  -||.++++.|++.|++|++..| +..+  ..+.+...  .......+++|+.++++...+++    
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~-~~~~--~~~~~~~~--~~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF-DRLR--LIQRITDR--LPAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEEC-SCHH--HHHHHHTT--SSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeC-ChHH--HHHHHHHH--cCCceeeEeeecccccccccccchhhh
Confidence            568999999765  4999999999999999999988 6532  22333332  23467789999999865555533    


Q ss_pred             ------CCCEEEEeccCCcccc----------chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccCCCCCCC
Q 019415           79 ------GCDFVFHVATPLQHID----------GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASPLKEDGS  142 (341)
Q Consensus        79 ------~~d~Vi~~a~~~~~~~----------~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~~~~~~~  142 (341)
                            ..|+++|+|+......          ...+...+..|+.........+....+....|+++|.....+.     
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~-----  154 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM-----  154 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC-----
T ss_pred             ccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccC-----
Confidence                  3699999999643211          2233455666777777777766655423345555554422211     


Q ss_pred             CCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCCCC--CCCCchhh
Q 019415          143 AGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNLPY--SSTPVSVI  216 (341)
Q Consensus       143 ~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~~~--~~~~~~~~  216 (341)
                                             .....|+.+|...+.+.+.++    .+|+++..|.||.+-.+.....  ........
T Consensus       155 -----------------------p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~  211 (268)
T d2h7ma1         155 -----------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAG  211 (268)
T ss_dssp             -----------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHH
T ss_pred             -----------------------cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhc
Confidence                                   124789999999999999887    3489999999998865421000  00000000


Q ss_pred             hhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEeccc
Q 019415          217 GGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNVF  273 (341)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~~  273 (341)
                      .......... .... ..      .+.+...+|+|+++.+++...  ..+| ++.+.+|-
T Consensus       212 ~~~~~~~~~~-~~~~-pl------~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~  263 (268)
T d2h7ma1         212 AQIQLLEEGW-DQRA-PI------GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  263 (268)
T ss_dssp             HHHHHHHHHH-HHHC-TT------CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             cchHHHHHHH-HhcC-CC------CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCc
Confidence            0001111000 0000 00      345777999999999998642  2466 56666554

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.58  E-value=9.6e-14  Score=119.31  Aligned_cols=217  Identities=14%  Similarity=0.048  Sum_probs=136.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc-hhhh-hHhhhCCC---------------CCCceEEEecCCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED-KSKV-DLLKSLPG---------------AETRLIFFEAEIYD   69 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-~~~~~~~~---------------~~~~~~~~~~Dl~~   69 (341)
                      ..+|||||++-||+++++.|++.|++|++.+| +... .... +.+.....               .........+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYH-RSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeC-CCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            46899999999999999999999999998877 5432 1111 11111100               11233445566888


Q ss_pred             hHHHHHHhc-------CCCEEEEeccCCcccc-----ch--------------hHhHhhhhhhhHHHHHHHHHHhc----
Q 019415           70 PDTFENAIQ-------GCDFVFHVATPLQHID-----GY--------------LYKNVVEACVGAAKKIASFCVKS----  119 (341)
Q Consensus        70 ~~~~~~~~~-------~~d~Vi~~a~~~~~~~-----~~--------------~~~~~~~~nv~~~~~l~~~~~~~----  119 (341)
                      .+.++++++       ++|++||+||......     .+              ....++.+|+.+...+.+++.+.    
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            877777653       6899999999765432     11              11236788999988888775432    


Q ss_pred             -----CCcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCc
Q 019415          120 -----GTVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGL  190 (341)
Q Consensus       120 -----~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~  190 (341)
                           +...++|+++|.....+..                            ....|+.+|...+.+.+.++    .+|+
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~----------------------------~~~~Y~asKaal~~lt~~lA~el~~~gI  213 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLL----------------------------GYTIYTMAKGALEGLTRSAALELAPLQI  213 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCT----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             HHHhcCCCCcccccccccccCCcc----------------------------ceeeeccccccchhhhHHHHHHhCCccc
Confidence                 1134678887776433211                            24789999999999999887    3499


Q ss_pred             eEEEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eE
Q 019415          191 EVVALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RF  267 (341)
Q Consensus       191 ~~~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~  267 (341)
                      ++..+.||.+-....        .............+.            ..-+...+|+|+++.+++...  -..| ++
T Consensus       214 rvN~I~PG~t~~~~~--------~~~~~~~~~~~~~pl------------~~R~~~peeiA~~v~fL~S~~s~~itG~~i  273 (284)
T d1e7wa_         214 RVNGVGPGLSVLVDD--------MPPAVWEGHRSKVPL------------YQRDSSAAEVSDVVIFLCSSKAKYITGTCV  273 (284)
T ss_dssp             EEEEEEESSBCCGGG--------SCHHHHHHHHTTCTT------------TTSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             ccccccccccccccc--------CCHHHHHHHHhcCCC------------CCCCCCHHHHHHHHHHHhCchhcCccCCeE
Confidence            999999996422111        122233333222111            123567999999999998643  2467 55


Q ss_pred             EEecc
Q 019415          268 FCTNV  272 (341)
Q Consensus       268 n~~~~  272 (341)
                      .+.+|
T Consensus       274 ~VDGG  278 (284)
T d1e7wa_         274 KVDGG  278 (284)
T ss_dssp             EESTT
T ss_pred             EECcC
Confidence            56544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.54  E-value=7.1e-13  Score=112.59  Aligned_cols=214  Identities=14%  Similarity=0.159  Sum_probs=134.0

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh--hhhHhhhCCCCCCceEEEecCCCCh----HHHHHH-----
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS--KVDLLKSLPGAETRLIFFEAEIYDP----DTFENA-----   76 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~-----   76 (341)
                      ..|||||++-||+++++.|++.|++|++.+| +.++..  ..+.+...  ......+.+.|..+.    +.+.++     
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYR-HSEGAAQRLVAELNAA--RAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   79 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEES-SCHHHHHHHHHHHHHH--STTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-CchHHHHHHHHHHHhh--cCCceEEEecccccchhHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999 754321  11222221  123666676666542    333332     


Q ss_pred             --hcCCCEEEEeccCCcccc----------------chhHhHhhhhhhhHHHHHHHHHHhcC--------CcCEEEEecc
Q 019415           77 --IQGCDFVFHVATPLQHID----------------GYLYKNVVEACVGAAKKIASFCVKSG--------TVKRLIYTAS  130 (341)
Q Consensus        77 --~~~~d~Vi~~a~~~~~~~----------------~~~~~~~~~~nv~~~~~l~~~~~~~~--------~~~~~I~~Ss  130 (341)
                        +.++|++||+||......                .......+..|+.+............        ....++.+|+
T Consensus        80 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (266)
T d1mxha_          80 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD  159 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred             HHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhh
Confidence              336999999999755321                11123455566666665555544432        1235566666


Q ss_pred             cccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc----cCCceEEEEecCceeCCCCC
Q 019415          131 VLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG----SSGLEVVALALGVVAGDTNL  206 (341)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~----~~~~~~~vlRp~~v~G~~~~  206 (341)
                      .....+.                            .....|+.||...+.+.+.++    .+|+++..+.||.+.-+...
T Consensus       160 ~~~~~~~----------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~  211 (266)
T d1mxha_         160 AMTDLPL----------------------------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM  211 (266)
T ss_dssp             GGGGSCC----------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS
T ss_pred             ccccccC----------------------------cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC
Confidence            5532211                            125889999999999988886    35899999999998644221


Q ss_pred             CCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 019415          207 PYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKPS--MSG-RFFCTNV  272 (341)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~g-~~n~~~~  272 (341)
                      .        ......+...-+.            .+-+...+|+|.++.+++....  ..| ++.+.+|
T Consensus       212 ~--------~~~~~~~~~~~pl------------~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG  260 (266)
T d1mxha_         212 P--------QETQEEYRRKVPL------------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  260 (266)
T ss_dssp             C--------HHHHHHHHTTCTT------------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C--------HHHHHHHHhcCCC------------CCCCCCHHHHHHHHHHHhCchhCCccCCeEEECcc
Confidence            1        1222222222111            2335679999999999997532  467 5666544

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.49  E-value=2.7e-12  Score=110.83  Aligned_cols=223  Identities=12%  Similarity=0.041  Sum_probs=135.9

Q ss_pred             CCcEEEEecCcc--hHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--------CC-CCCc-eEEEecC--CC--
Q 019415            5 SNFKVCVTGGEG--FVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--------PG-AETR-LIFFEAE--IY--   68 (341)
Q Consensus         5 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~-~~~~-~~~~~~D--l~--   68 (341)
                      ++|++|||||+|  -||.++++.|++.|.+|++..| +.............        .. .... -.....|  +.  
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTW-VPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEE-HHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeC-chhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcccc
Confidence            578999999987  7999999999999999999888 53221111111110        00 0001 1122222  21  


Q ss_pred             -------------------Ch----HHHHHHhcCCCEEEEeccCCcc-----c--cchhHhHhhhhhhhHHHHHHHHHHh
Q 019415           69 -------------------DP----DTFENAIQGCDFVFHVATPLQH-----I--DGYLYKNVVEACVGAAKKIASFCVK  118 (341)
Q Consensus        69 -------------------~~----~~~~~~~~~~d~Vi~~a~~~~~-----~--~~~~~~~~~~~nv~~~~~l~~~~~~  118 (341)
                                         +.    +.+.+.+.++|++||+||....     .  ..+.++..+++|+.+...+..++..
T Consensus        86 ~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~  165 (297)
T d1d7oa_          86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP  165 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             ccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHH
Confidence                               11    1222334579999999986431     1  1455678999999999999998876


Q ss_pred             cCC-cCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-----cCCceE
Q 019415          119 SGT-VKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-----SSGLEV  192 (341)
Q Consensus       119 ~~~-~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~~~~~  192 (341)
                      ... -.+.+.+++........                           .....|..+|...+.+.+.++     ++|+++
T Consensus       166 ~~~~~g~~~~~~~~~~~~~~~---------------------------~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrv  218 (297)
T d1d7oa_         166 IMNPGGASISLTYIASERIIP---------------------------GYGGGMSSAKAALESDTRVLAFEAGRKQNIRV  218 (297)
T ss_dssp             GEEEEEEEEEEECGGGTSCCT---------------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred             HhhcCCcceeeeehhhccccc---------------------------ccccceecccccccccccccchhccccceEEe
Confidence            531 12455555554222111                           113679999988887776654     348999


Q ss_pred             EEEecCceeCCCCCCCCCCCchhhhhHhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcC--CCCCc-eEEE
Q 019415          193 VALALGVVAGDTNLPYSSTPVSVIGGLCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEK--PSMSG-RFFC  269 (341)
Q Consensus       193 ~vlRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~g-~~n~  269 (341)
                      ..+.||.+..+.....    ...+.+.+...+..+             ..-+...+|+|.++.+++..  ...+| ++.+
T Consensus       219 N~I~PG~i~T~~~~~~----~~~~~~~~~~~~~~P-------------lgR~~~peevA~~v~fL~S~~a~~itGq~i~v  281 (297)
T d1d7oa_         219 NTISAGPLGSRAAKAI----GFIDTMIEYSYNNAP-------------IQKTLTADEVGNAAAFLVSPLASAITGATIYV  281 (297)
T ss_dssp             EEEEECCCBCCCSSCC----SHHHHHHHHHHHHSS-------------SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred             cccccccccchhhhhc----cCCHHHHHHHHhCCC-------------CCCCCCHHHHHHHHHHHhCchhcCCcCceEEE
Confidence            9999999977654332    112233332222111             22366799999999999864  23567 5566


Q ss_pred             ecc
Q 019415          270 TNV  272 (341)
Q Consensus       270 ~~~  272 (341)
                      .++
T Consensus       282 DGG  284 (297)
T d1d7oa_         282 DNG  284 (297)
T ss_dssp             STT
T ss_pred             CcC
Confidence            544

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.41  E-value=1.7e-11  Score=103.38  Aligned_cols=217  Identities=13%  Similarity=0.010  Sum_probs=125.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh--------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI--------   77 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~--------   77 (341)
                      ||.||||||++-||+++++.|++.|++|++++| +...                   ...|+.+.+......        
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~-~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~   60 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDI-RDAE-------------------VIADLSTAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SSSS-------------------EECCTTSHHHHHHHHHHHHTTCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEEC-ChHH-------------------HHHHhcCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999998 6432                   245676654433332        


Q ss_pred             cCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHH----HhcCCcCEEEEecccccccCCCCCCCCCCCCCCCCC-
Q 019415           78 QGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFC----VKSGTVKRLIYTASVLCASPLKEDGSAGYKDSIDET-  152 (341)
Q Consensus        78 ~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~-  152 (341)
                      ...|+++++|+......  .+......|..+...+.+..    .+.. ......+++..........      .+.... 
T Consensus        61 ~~id~lv~~Ag~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~  131 (257)
T d1fjha_          61 KGMDGLVLCAGLGPQTK--VLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDK------NPLALAL  131 (257)
T ss_dssp             TCCSEEEECCCCCTTCS--SHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGG------CTTHHHH
T ss_pred             CCCcEEEEcCCCCCcHH--HHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhh------hhhhhhc
Confidence            24899999998655432  24466677777776665543    3333 4566666655422211110      000000 


Q ss_pred             CC----------CCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c---CCceEEEEecCceeCCCCCCCCCCCchhhhh
Q 019415          153 CY----------TPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S---SGLEVVALALGVVAGDTNLPYSSTPVSVIGG  218 (341)
Q Consensus       153 ~~----------~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~vlRp~~v~G~~~~~~~~~~~~~~~~  218 (341)
                      ..          ....     .......|+.+|...+.+.+.++ +   +|+++..+.||.+-.+.....  ..  -...
T Consensus       132 ~~g~~~~i~s~~~~~~-----~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~--~~~~  202 (257)
T d1fjha_         132 EAGEEAKARAIVEHAG-----EQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG--LQ--DPRY  202 (257)
T ss_dssp             HHTCHHHHHHHHHTCC-----TTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------
T ss_pred             cCCcEEEEeeehhccC-----CCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhh--cC--CHHH
Confidence            00          0000     01224579999999999999987 3   489999999999966532221  00  0011


Q ss_pred             HhhHhcCccccccccchhhccCCCCcccHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 019415          219 LCQLTNNEYVYQTLRDTEEILGKLPLVHIDDVCEAHIFCMEKP--SMSG-RFFCTNV  272 (341)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~g-~~n~~~~  272 (341)
                      ...+.+...   +         ..-+...+|+|.++.+++...  ..+| ++.+.+|
T Consensus       203 ~~~~~~~~~---P---------lgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         203 GESIAKFVP---P---------MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             ------CCC---S---------TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhcCC---C---------CCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            111111100   0         223567899999999998643  3567 5556444

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.33  E-value=2.9e-11  Score=105.66  Aligned_cols=168  Identities=10%  Similarity=0.034  Sum_probs=112.2

Q ss_pred             CcEEEEec--CcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC----------CCCCCceEEEec--------
Q 019415            6 NFKVCVTG--GEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL----------PGAETRLIFFEA--------   65 (341)
Q Consensus         6 ~~~ilI~G--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~~~--------   65 (341)
                      .+.+||||  ++.-||.++++.|++.|.+|.+..| +.............          ............        
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIW-PPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeC-chhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            46899999  5568999999999999999999877 54332222111110          000111222333        


Q ss_pred             ------------CCCChHHHHH-------HhcCCCEEEEeccCCccc-------cchhHhHhhhhhhhHHHHHHHHHHhc
Q 019415           66 ------------EIYDPDTFEN-------AIQGCDFVFHVATPLQHI-------DGYLYKNVVEACVGAAKKIASFCVKS  119 (341)
Q Consensus        66 ------------Dl~~~~~~~~-------~~~~~d~Vi~~a~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~~~  119 (341)
                                  |+.+.+.+++       .+.++|++||+||.....       ..+.++..+++|+.++..+++++...
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                        4444433333       344799999999864321       14567789999999999998888665


Q ss_pred             C-CcCEEEEecccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccCcchhhhHHHhHHHHHHHHHhhc-c----CCceEE
Q 019415          120 G-TVKRLIYTASVLCASPLKEDGSAGYKDSIDETCYTPPDHPLTCHNEYLRVYIESKMKSEKELLSYG-S----SGLEVV  193 (341)
Q Consensus       120 ~-~~~~~I~~Ss~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-~----~~~~~~  193 (341)
                      - .-.++|.+||.+...+.+                           .+...|+.+|...+.+.+.++ +    +|+++.
T Consensus       161 m~~~GsIv~iss~~~~~~~p---------------------------~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVN  213 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVP---------------------------GYGGGMSSAKAALESDTRVLAYHLGRNYNIRIN  213 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCT---------------------------TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred             cccccccccceeehhccccc---------------------------ccchhhhhhhccccccchhhHHHHhcccCcEEE
Confidence            1 135899998876433211                           123579999999999998876 3    489999


Q ss_pred             EEecCcee
Q 019415          194 ALALGVVA  201 (341)
Q Consensus       194 vlRp~~v~  201 (341)
                      .|.||.|-
T Consensus       214 aI~PG~i~  221 (329)
T d1uh5a_         214 TISAGPLK  221 (329)
T ss_dssp             EEEECCCC
T ss_pred             EEecCccc
Confidence            99999874

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.22  E-value=6.1e-12  Score=101.18  Aligned_cols=102  Identities=21%  Similarity=0.178  Sum_probs=75.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhh-HhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVD-LLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++|+||||||+|.||+.+++.|++.|++|+++.| +.++..... .+..    ...+.+..+|+.+.+.+++.+.++|+|
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r-~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~iDil   96 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGR-KLDKAQAAADSVNK----RFKVNVTAAETADDASRAEAVKGAHFV   96 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEES-SHHHHHHHHHHHHH----HHTCCCEEEECCSHHHHHHHTTTCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhccc-chHHHHHHHHHHHh----ccchhhhhhhcccHHHHHHHhcCcCee
Confidence            6799999999999999999999999999999999 765433222 2221    125567889999999999999999999


Q ss_pred             EEeccCCcccc-chhHhHhhhhhhhHHHH
Q 019415           84 FHVATPLQHID-GYLYKNVVEACVGAAKK  111 (341)
Q Consensus        84 i~~a~~~~~~~-~~~~~~~~~~nv~~~~~  111 (341)
                      ||+|+...... .+.++..++.|+.+..+
T Consensus        97 in~Ag~g~~~~~~e~~~~~~~~nv~~~~~  125 (191)
T d1luaa1          97 FTAGAIGLELLPQAAWQNESSIEIVADYN  125 (191)
T ss_dssp             EECCCTTCCCBCHHHHHTCTTCCEEEECC
T ss_pred             eecCccccccCCHHHHHhhhcceeehhHh
Confidence            99998643322 33333444555444433

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.56  E-value=3e-07  Score=69.16  Aligned_cols=113  Identities=15%  Similarity=0.180  Sum_probs=76.9

Q ss_pred             EEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      ||.|+||+|.+|++++..|..+|  -++..++. +... .....+...... .....+    ....+..+.++++|+||-
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi-~~~~-~~a~Dl~~~~~~-~~~~~~----~~~~~~~~~~~~aDivVi   74 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDI-AHTP-GVAADLSHIETR-ATVKGY----LGPEQLPDCLKGCDVVVI   74 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEES-SSHH-HHHHHHTTSSSS-CEEEEE----ESGGGHHHHHTTCSEEEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEec-cccc-hhhHHHhhhhhh-cCCCeE----EcCCChHHHhCCCCEEEE
Confidence            79999999999999999999887  46777777 5432 222222111111 111111    134567778899999999


Q ss_pred             eccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           86 VATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        86 ~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      +||...... ....++++.|+...+.+++.+.+++ .+-+|.+-
T Consensus        75 tag~~~~~g-~sR~~ll~~N~~i~~~i~~~i~~~~-p~~iiivv  116 (144)
T d1mlda1          75 PAGVPRKPG-MTRDDLFNTNATIVATLTAACAQHC-PDAMICII  116 (144)
T ss_dssp             CCSCCCCTT-CCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred             CCCcCCCCC-CCcchHHHHHHHHHHHHHHHHHhcC-CCeEEEEe
Confidence            999754432 2345889999999999999999997 44444443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.53  E-value=1.8e-07  Score=69.61  Aligned_cols=71  Identities=21%  Similarity=0.229  Sum_probs=58.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi~   85 (341)
                      |+|+|+|+ |.+|+++++.|.+.|++|+++.+ +++   +.+.+...    -+..++.+|.++++.+.++ ++++|.++-
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~-d~~---~~~~~~~~----~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~   71 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDI-DKD---ICKKASAE----IDALVINGDCTKIKTLEDAGIEDADMYIA   71 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHH---HHHHHHHH----CSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecC-Chh---hhhhhhhh----hhhhhccCcccchhhhhhcChhhhhhhcc
Confidence            79999996 99999999999999999999988 654   33434321    1567899999999999988 578898887


Q ss_pred             e
Q 019415           86 V   86 (341)
Q Consensus        86 ~   86 (341)
                      +
T Consensus        72 ~   72 (132)
T d1lssa_          72 V   72 (132)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.48  E-value=1.2e-06  Score=66.18  Aligned_cols=120  Identities=17%  Similarity=0.189  Sum_probs=80.4

Q ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchh-hhhHhhh-CCCCCCceEEEecCCCChHHHHHH
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKS-KVDLLKS-LPGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      |....++||.|+|| |++|++++..|+..|.  ++..+++ +..... ....+.. ..-....+.+...|.       +.
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di-~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~   71 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDA-NESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DD   71 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GG
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEee-ccccccchhccHhhCccccCCCeEEEECCH-------HH
Confidence            67777789999996 9999999999999874  7888877 543311 1111211 111122444444443       34


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ++++|+||.+|+...... ....+.+..|....+.+++.+.+.+.-..+|.+|-
T Consensus        72 l~daDvvvitag~~~~~~-~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          72 CRDADLVVICAGANQKPG-ETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             TTTCSEEEECCSCCCCTT-TCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             hccceeEEEecccccccC-cchhHHHHHHHHHHHHHHHHHHhhCCCceEEEecC
Confidence            668999999999765443 22347788999999999999988873345555443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.43  E-value=2.1e-06  Score=64.44  Aligned_cols=114  Identities=15%  Similarity=0.076  Sum_probs=75.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhh----Hhhh-CCCCCCceEEEecCCCChHHHHHHhcC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVD----LLKS-LPGAETRLIFFEAEIYDPDTFENAIQG   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~----~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (341)
                      |||.|+||+|.+|+.++..|+.+|  .++..+++ +... .+.+    .+.. ........+....--.+.    +.+++
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~-~~~~-~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~   74 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGR-EHSI-NKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDE   74 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC-GGGH-HHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccc-hhhh-HhhhcccccchhcccccccCCccccCCcchH----HHhcc
Confidence            789999999999999999999988  58888887 5422 1111    1221 112222333322111122    36678


Q ss_pred             CCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEe
Q 019415           80 CDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT  128 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~  128 (341)
                      +|+||-+||....... ...+.++.|..-.+.+++...+.+ .+.+|.+
T Consensus        75 aDvVVitAG~~~~~g~-sR~dl~~~Na~iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          75 SDVVIITSGVPRKEGM-SRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             CSEEEECCSCCCCTTC-CHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred             ceEEEEecccccCCCC-ChhhhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence            9999999997554332 345889999999999999998887 4544433

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.42  E-value=8.1e-07  Score=66.91  Aligned_cols=113  Identities=17%  Similarity=0.126  Sum_probs=71.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++|||.|+|+ |++|+.++..|+..|  .+|.++++ +..... ....+..............+|.   +    .++++|
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~-~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~ad   74 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDV-VKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKDAD   74 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeec-ccchhHHHHHHHhccccccCCceEeeccH---H----Hhcccc
Confidence            3589999995 999999999999987  68999988 653311 1111111111112344455553   2    357899


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEe
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYT  128 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~  128 (341)
                      +||.+|+...... ....+.+..|+.....+++.+.+.+ .+-++.+
T Consensus        75 ivvitag~~~~~g-~~r~~l~~~N~~i~~~~~~~i~~~~-p~aiviv  119 (146)
T d1ez4a1          75 LVVITAGAPQKPG-ESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLV  119 (146)
T ss_dssp             EEEECCCC-----------CHHHHHHHHHHHHHHHHHTT-CCSEEEE
T ss_pred             EEEEecccccCCC-CCHHHHHHHHHHHHHHHHHHHhhcC-CCcEEEE
Confidence            9999998765443 2244788899999999999999987 4444433

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.38  E-value=4e-06  Score=62.84  Aligned_cols=117  Identities=18%  Similarity=0.137  Sum_probs=75.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHH-C--CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLD-K--GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      |||.|+|++|.+|++++..|.. .  +.++..++. ..........+.... .......+. .   ..++ +.+++.|+|
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~-~~~~~g~a~Dl~h~~-~~~~~~~~~-~---~~~~-~~~~~aDvv   73 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI-APVTPGVAVDLSHIP-TAVKIKGFS-G---EDAT-PALEGADVV   73 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECS-STTHHHHHHHHHTSC-SSCEEEEEC-S---SCCH-HHHTTCSEE
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecc-cccchhHHHHHHCCc-cccCCcEEE-c---CCCc-cccCCCCEE
Confidence            7999999999999999988754 3  378888876 432211222222221 111222221 1   1222 367799999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASV  131 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~  131 (341)
                      |-+||...... ....++++.|....+.+.+.+.+.+.-..+|.+|..
T Consensus        74 vitaG~~~k~g-~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNP  120 (145)
T d2cmda1          74 LISAGVRRKPG-MDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP  120 (145)
T ss_dssp             EECCSCCCCTT-CCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSS
T ss_pred             EECCCccCCCC-cchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCC
Confidence            99999765443 234588999999999999999998733455655543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.37  E-value=6.6e-07  Score=70.01  Aligned_cols=75  Identities=21%  Similarity=0.274  Sum_probs=57.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      .|+|||+|| |++|+++++.|.+.||+|+++.| +..+   .+.+...   .........+..+.......+...|.++.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr-~~~~---a~~l~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACR-TLES---AKKLSAG---VQHSTPISLDVNDDAALDAEVAKHDLVIS   73 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEES-CHHH---HHHHHTT---CTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEEC-ChHH---HHHHHhc---ccccccccccccchhhhHhhhhccceeEe
Confidence            479999986 99999999999999999999999 6643   3333331   13455566677777888888888898887


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        74 ~~~   76 (182)
T d1e5qa1          74 LIP   76 (182)
T ss_dssp             CSC
T ss_pred             ecc
Confidence            643

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.24  E-value=7e-06  Score=61.17  Aligned_cols=113  Identities=13%  Similarity=-0.022  Sum_probs=75.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCc-hhhh--hHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLED-KSKV--DLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ||.|+||+|.+|+.++..|+.++.  ++..++. +... ..+.  ..+..........+...+|.   +    .++++|+
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di-~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~----~~~~aDi   73 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI-PDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---E----DTAGSDV   73 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC-GGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---G----GGTTCSE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEec-CCcccccceeecchhhcccccCCceEeeCCH---H----HhhhcCE
Confidence            799999999999999999999983  6777765 3221 1111  11211011223445555543   2    3468999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      ||-+||...... ....+.++.|..-.+.+++...+.+.-..+|.+|
T Consensus        74 VvitaG~~~~~g-~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          74 VVITAGIPRQPG-QTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEecccccccC-CchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            999999755433 3355889999999999999999987333444443

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.18  E-value=1.5e-05  Score=59.44  Aligned_cols=113  Identities=13%  Similarity=0.095  Sum_probs=71.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCch-hhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDK-SKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      +||.|+|+ |.+|+.++..|+..+  .++..+++ +.... .....+..............+|   .    +.++++|+|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~-~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~----~~~~~adiv   72 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDV-FKEKAIGEAMDINHGLPFMGQMSLYAGD---Y----SDVKDCDVI   72 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECC-C---CCHHHHHHTTSCCCTTCEEEC--C---G----GGGTTCSEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEec-cCCccceeeeeeccCcccCCCeeEeeCc---H----HHhCCCceE
Confidence            58999996 999999999999987  48999887 65431 1222222211222334433332   2    346789999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      |-+|+...... ....+.+..|+.-...+++.+.+.+.-..+|.+|
T Consensus        73 vitag~~~~~~-~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          73 VVTAGANRKPG-ETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             EECCCC-------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EEecccccCcC-cchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            99999765433 3345788999999999999999987233455443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.18  E-value=2.5e-06  Score=64.92  Aligned_cols=120  Identities=15%  Similarity=0.132  Sum_probs=74.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC----e-E-EEEecCCCCchhhhhHhhh-C-CCCCCceEEEecCCCChHHHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY----I-V-HTTLRPNLEDKSKVDLLKS-L-PGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~----~-V-~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      ++|||.|+||+|++|++++..|+..+.    + + +-+.. ......+.+.+.. + .........+...    ....+.
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~   77 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE-IPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVA   77 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC-CGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhc-cccchhhHcCchhhhhccccccccccccC----Cchhhh
Confidence            568999999999999999999988642    1 1 11222 2222233322211 0 0111223333322    234578


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCc-CEEEEecc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTV-KRLIYTAS  130 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~I~~Ss  130 (341)
                      ++++|+||-+||....... ...+.+..|+.-.+.+.+.+.+.... ..++.+|.
T Consensus        78 ~~~advViitaG~~~~pg~-~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          78 FKDADYALLVGAAPRKAGM-ERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             TTTCSEEEECCCCCCCTTC-CHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             cccccEEEeecCcCCCCCC-cHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence            8899999999998665432 34588899999999999999986412 34555553

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.13  E-value=3.7e-06  Score=62.37  Aligned_cols=72  Identities=21%  Similarity=0.176  Sum_probs=56.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi~   85 (341)
                      |+++|+| .|.+|+++++.|.+.|++|+++.. ++   +..+.+..     .+...+.+|.++++.+.++ ++++|.||-
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g~~vvvid~-d~---~~~~~~~~-----~~~~~~~gd~~~~~~l~~a~i~~a~~vi~   70 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMGHEVLAVDI-NE---EKVNAYAS-----YATHAVIANATEENELLSLGIRNFEYVIV   70 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCCEEEES-CH---HHHHHTTT-----TCSEEEECCTTCTTHHHHHTGGGCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCeEEEecC-cH---HHHHHHHH-----hCCcceeeecccchhhhccCCccccEEEE
Confidence            4688998 599999999999999999999988 65   33333332     2556788999999999887 678998776


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        71 ~~~   73 (134)
T d2hmva1          71 AIG   73 (134)
T ss_dssp             CCC
T ss_pred             EcC
Confidence            643

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.08  E-value=2e-05  Score=58.81  Aligned_cols=114  Identities=15%  Similarity=0.047  Sum_probs=74.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhh-HhhhC-CCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVD-LLKSL-PGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+|| |.+|++++..|+..|  .++..+++ +........ .+... .......++...+  +.    +.++++|+
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di-~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~~dadv   72 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDV-VEGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADTANSDI   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEecc-ccccchhhhhhhhcccchhcccceEEecC--CH----HHhcCCeE
Confidence            78999996 999999999999987  58998888 665422111 11111 0011233333221  22    24678999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      ||-+||....... ...+..+.|..-.+.+++.+.+.+.-..++.+|
T Consensus        73 vvitag~~~~~g~-~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          73 VIITAGLPRKPGM-TREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EEECCSCCCCTTC-CHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEEecCCCCCC-chHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            9999997554332 244788899999999999998887334444443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.07  E-value=1.8e-05  Score=58.88  Aligned_cols=112  Identities=21%  Similarity=0.139  Sum_probs=74.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchhhhhHhh--hCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKSKVDLLK--SLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+|+ |.+|+.++..|+.++  .++..+++ +... .+.+.+.  .............+|.       +.++++|+
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di-~~~~-~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adi   70 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDV-DKKR-AEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDV   70 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECS-SHHH-HHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEec-cccc-ccchhccccccccccccccccCCcH-------HHhcCCCE
Confidence            78999996 999999999998887  58888877 5433 1111111  1111122344444332       24678999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      ||-+|+....... ...+.+..|..-.+.+++...+.+.-..+|.+|
T Consensus        71 vvitag~~~~~g~-~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          71 VIVAAGVPQKPGE-TRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             EEECCCCCCCSSC-CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEecccccCCCc-chhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            9999997665432 234778889999999999999987334444433

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.06  E-value=3.4e-05  Score=57.44  Aligned_cols=114  Identities=22%  Similarity=0.144  Sum_probs=74.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchh-hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKS-KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .||.|+|+ |.+|++++..|+.+|  .++..+++ +..... ....+...........+...+  +.    +.++++|+|
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~-~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvV   73 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDI-AKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMV   73 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-SHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEe-ccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEE
Confidence            58999996 999999999999998  47888877 553311 111122211122233333322  21    246689999


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      |-+||...... ....+.++.|..-.+.++..+.+.+.-..+|.+|
T Consensus        74 VitaG~~~~~g-~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          74 VITAGPRQKPG-QSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             EECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EEecccccCCC-CchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            99999866543 2244788999999999999999987334445444

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.05  E-value=4.1e-05  Score=57.87  Aligned_cols=118  Identities=14%  Similarity=0.020  Sum_probs=74.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhh-hHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKV-DLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      +++||.|+|+ |.+|+.++..|+..+ .++.+++. +....... ..+.. ............     ....++.++++|
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~-~~~~~~g~a~Dl~~~~~~~~~~~~~~~-----~~~~~~~~~~ad   78 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDV-VKGMPEGKALDLSHVTSVVDTNVSVRA-----EYSYEAALTGAD   78 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SSSHHHHHHHHHHHHHHHTTCCCCEEE-----ECSHHHHHTTCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEe-ccccchhHHHHHhhhccccCCeeEEec-----cCchhhhhcCCC
Confidence            4589999997 999999999888887 48888777 65431111 11111 000001111111     123456788999


Q ss_pred             EEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           82 FVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        82 ~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      +||-+|+......    .....+.+..|......+++.+.+.+.-..||.+|
T Consensus        79 iVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          79 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             eEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9999998754322    12345788899999999999999988333444444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.02  E-value=5e-05  Score=58.60  Aligned_cols=114  Identities=7%  Similarity=0.003  Sum_probs=72.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-----C--eEEEEecCCCCchhhhhHh----hhCCCCCCceE-EEecCCCChHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-----Y--IVHTTLRPNLEDKSKVDLL----KSLPGAETRLI-FFEAEIYDPDTF   73 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~-~~~~Dl~~~~~~   73 (341)
                      ..||.|+||+|.||++++..|++..     .  .++.++. .. ....++.+    .....  .... ++.+     .+.
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di-~~-~~~~l~g~~mdl~d~a~--~~~~~~~~~-----~~~   94 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGS-ER-SFQALEGVAMELEDSLY--PLLREVSIG-----IDP   94 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC-GG-GHHHHHHHHHHHHTTTC--TTEEEEEEE-----SCH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecC-cc-ccchhcchhhhhccccc--ccccCcccc-----ccc
Confidence            3589999999999999999998752     1  3444443 22 11222222    11111  1222 2221     235


Q ss_pred             HHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCc-CEEEEec
Q 019415           74 ENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTV-KRLIYTA  129 (341)
Q Consensus        74 ~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~~I~~S  129 (341)
                      .+.++++|+||-+||...... ....+.++.|..-.+.+.+++.+..+. .+++.+|
T Consensus        95 ~~~~~~aDvVvi~ag~~rkpg-~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          95 YEVFEDVDWALLIGAKPRGPG-MERAALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             HHHTTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             hhhccCCceEEEeeccCCCCC-CcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            678889999999999865443 334588999999999999999997422 3455554

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=4.9e-05  Score=56.72  Aligned_cols=95  Identities=17%  Similarity=0.122  Sum_probs=55.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC----CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG----YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      |+||.|+||||++|+.+++.|++..    .+++.+.+ +............      .  ....++.+.+    .++++|
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~s-s~s~g~~~~~~~~------~--~~~~~~~~~~----~~~~~D   67 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFST-SQLGQAAPSFGGT------T--GTLQDAFDLE----ALKALD   67 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEES-SSTTSBCCGGGTC------C--CBCEETTCHH----HHHTCS
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeec-cccccccccccCC------c--eeeecccchh----hhhcCc
Confidence            4689999999999999999888763    35666665 4332111111100      1  1122233332    356899


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcC-EEEEeccc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK-RLIYTASV  131 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~I~~Ss~  131 (341)
                      ++|.+++..                 ....+...+.+.| .+ .+|=.||+
T Consensus        68 ivF~a~~~~-----------------~s~~~~~~~~~~g-~~~~VID~Ss~  100 (146)
T d1t4ba1          68 IIVTCQGGD-----------------YTNEIYPKLRESG-WQGYWIDAASS  100 (146)
T ss_dssp             EEEECSCHH-----------------HHHHHHHHHHHTT-CCCEEEECSST
T ss_pred             EEEEecCch-----------------HHHHhhHHHHhcC-CCeecccCCcc
Confidence            999987421                 1345666677777 43 35555554

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.93  E-value=1.2e-05  Score=60.17  Aligned_cols=33  Identities=27%  Similarity=0.430  Sum_probs=27.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC---eEEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLR   38 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r   38 (341)
                      +|+|.|+||||++|+.|++.|.+++|   ++..+..
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s   37 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLAS   37 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEee
Confidence            58999999999999999999987653   6666544

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.93  E-value=4.4e-05  Score=57.07  Aligned_cols=114  Identities=14%  Similarity=0.093  Sum_probs=71.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchh--hhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKS--KVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +||.|+| .|.+|+.++..|+.+|  .++..+++ +.....  ..+.................|.       +.++++|+
T Consensus         2 kKI~IIG-aG~VG~~~a~~l~~~~~~~elvL~Di-~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~-------~~l~~adi   72 (146)
T d1hyha1           2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDA-NEAKVKADQIDFQDAMANLEAHGNIVINDW-------AALADADV   72 (146)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECS-SHHHHHHHHHHHHHHGGGSSSCCEEEESCG-------GGGTTCSE
T ss_pred             CeEEEEC-cCHHHHHHHHHHHhcCCCceEEEEec-ccchhhhHHHhhhccccccCCccceeccCH-------HHhccccE
Confidence            6899999 5999999999999987  47888777 554311  1111111111222333444442       24578999


Q ss_pred             EEEeccCCcccc---chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           83 VFHVATPLQHID---GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        83 Vi~~a~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      ||-+||......   .....+.+..|......+++.+.+.+.-..+|.+|
T Consensus        73 VVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          73 VISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            999999654322   11233567889999999999999887233444433

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.91  E-value=9.2e-05  Score=56.03  Aligned_cols=115  Identities=20%  Similarity=0.065  Sum_probs=75.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchh-hhhHhhhCCC-CCCceEEEecCCCChHHHHHHhcCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKS-KVDLLKSLPG-AETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      .+||.|+|+ |.+|+.++..|+.+|.  ++..+++ +..... ....+..... .........+|.       +.++++|
T Consensus        20 ~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~-~~~~a~g~alDl~h~~~~~~~~~~~~~~d~-------~~~~~ad   90 (160)
T d1i0za1          20 NNKITVVGV-GQVGMACAISILGKSLADELALVDV-LEDKLKGEMMDLQHGSLFLQTPKIVADKDY-------SVTANSK   90 (160)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS-CHHHHHHHHHHHHHTGGGCCCSEEEECSSG-------GGGTTCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEe-ccchhHHHHHHHhccccccCCCeEEeccch-------hhccccc
Confidence            469999995 9999999999999984  7888877 543311 1111221111 112222233332       2466899


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +||..||...... ....+.++.|+...+.++....+.+.-..+|.+|-
T Consensus        91 iVVitAg~~~~~g-~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          91 IVVVTAGVRQQEG-ESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             EEEECCSCCCCTT-CCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             EEEEecCCccccC-cchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            9999999765543 23447888999999999999999873334555554

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.91  E-value=6.7e-05  Score=55.77  Aligned_cols=114  Identities=15%  Similarity=0.095  Sum_probs=73.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCCCchh-hhhHhh-hCCCCCCceEEEe-cCCCChHHHHHHhcCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNLEDKS-KVDLLK-SLPGAETRLIFFE-AEIYDPDTFENAIQGCD   81 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~~~~~-~Dl~~~~~~~~~~~~~d   81 (341)
                      |||.|+|+ |.+|++++..|+.+|  .++.++++ +.+... ....+. ..+.......+.. .|.       +.++++|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di-~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~-------~~~~~ad   71 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDI-AEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-------SLLKGSE   71 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECS-SHHHHHHHHHHHHHHHHTTTCCCEEEEESCG-------GGGTTCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEec-ccchhhHHHHHHhhhccccCCCCccccCCCH-------HHhcccc
Confidence            79999996 999999999999887  47888877 553311 111111 1111111223332 232       2667899


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +||-.|+....... ...+.+..|..-...+.+.+.+.+.-..+|.+|-
T Consensus        72 iVvitag~~~~~g~-~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          72 IIVVTAGLARKPGM-TRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             EEEECCCCCCCSSC-CHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEEEeccccCCCCC-chHHHHHHhhHHHHHHHHHHHhhCCCcEEEEecC
Confidence            99999986554432 2447888899999999999999873334444443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.90  E-value=3.9e-06  Score=66.44  Aligned_cols=36  Identities=28%  Similarity=0.374  Sum_probs=33.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      |||.|+||+|.+|++|++.|++.||+|++.+| ++++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R-~~e~   36 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSR-REEK   36 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEES-SHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEEC-CHHH
Confidence            78999999999999999999999999999999 7654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.90  E-value=2.2e-05  Score=61.28  Aligned_cols=80  Identities=15%  Similarity=0.015  Sum_probs=51.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |||.|+| .|.+|..++..|.++||+|++++| +.................+.............++.+.++++|+||-+
T Consensus         2 k~iaIiG-aG~~G~~~A~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~   79 (184)
T d1bg6a2           2 KTYAVLG-LGNGGHAFAAYLALKGQSVLAWDI-DAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV   79 (184)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred             CEEEEEC-ccHHHHHHHHHHHHCCCEEEEEEC-CHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence            7999999 599999999999999999999999 76443333222111100111222222221223467888899999987


Q ss_pred             cc
Q 019415           87 AT   88 (341)
Q Consensus        87 a~   88 (341)
                      ..
T Consensus        80 v~   81 (184)
T d1bg6a2          80 VP   81 (184)
T ss_dssp             SC
T ss_pred             Ec
Confidence            53

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.89  E-value=0.00011  Score=55.38  Aligned_cols=116  Identities=18%  Similarity=0.032  Sum_probs=71.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-----C--eEEEEecCCCCchhhhhHhhh---CCCCCCceEEEecCCCChHHHH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-----Y--IVHTTLRPNLEDKSKVDLLKS---LPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      .+|||.|+||+|.+|++++..|+..+     .  ++..++. + ....+.+.+..   .... .....+..    .....
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~-~-~~~~~~~~l~~~~~~~~~-~~~~~~~~----~~~~~   74 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDI-T-PMMGVLDGVLMELQDCAL-PLLKDVIA----TDKEE   74 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECC-G-GGHHHHHHHHHHHHHTCC-TTEEEEEE----ESCHH
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecC-c-cchhhhhhhhhhhccccc-cccccccc----Ccccc
Confidence            46899999999999999999998753     1  2333333 2 22233333321   0111 12221111    12245


Q ss_pred             HHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhc-CCcC-EEEEec
Q 019415           75 NAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKS-GTVK-RLIYTA  129 (341)
Q Consensus        75 ~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~-~~I~~S  129 (341)
                      +.++++|+||-+||....... ...+.+..|..-.+.+.+...+. + -. .+|.+|
T Consensus        75 ~~~~~~dvVVitag~~~~~g~-sr~dll~~N~~i~k~~~~~i~k~a~-~~~~iivvs  129 (154)
T d5mdha1          75 IAFKDLDVAILVGSMPRRDGM-ERKDLLKANVKIFKCQGAALDKYAK-KSVKVIVVG  129 (154)
T ss_dssp             HHTTTCSEEEECCSCCCCTTC-CTTTTHHHHHHHHHHHHHHHHHHSC-TTCEEEECS
T ss_pred             cccCCceEEEEecccCCCCCC-chhHHHHHhHHHHHHHHHHHHhhCC-CceEEEEec
Confidence            678899999999997665432 23477899999999999998775 4 33 344444

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=5.9e-05  Score=57.11  Aligned_cols=116  Identities=18%  Similarity=0.111  Sum_probs=74.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCCchh-hhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLEDKS-KVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      +..||.|+|+ |.+|+.++..|+..|.  ++..+++ +..... ....+.. .............|.       +.++++
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~-~~~~a~g~alDl~~~~~~~~~~~~~~~~d~-------~~~~~a   88 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDA-DTDKLRGEALDLQHGSLFLSTPKIVFGKDY-------NVSANS   88 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECS-CHHHHHHHHHHHHHTTTTCSCCEEEEESSG-------GGGTTE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeC-CchhhhccHHHHhCcchhcCCCeEEeccch-------hhhccc
Confidence            3468999995 9999999999999974  7888877 543311 1112222 111122222333332       245688


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |+||-+|+...... ....+.++.|+...+.++....+.+.-..+|.+|-
T Consensus        89 divvitag~~~~~~-~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          89 KLVIITAGARMVSG-QTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             EEEEECCSCCCCTT-TCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             cEEEEecccccCCC-CCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence            99999998765543 22347788899999999998888873344555444

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.78  E-value=6.9e-05  Score=60.24  Aligned_cols=108  Identities=8%  Similarity=0.004  Sum_probs=68.8

Q ss_pred             CCCCCCcEEEEecC----------------cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEe
Q 019415            1 MDHKSNFKVCVTGG----------------EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFE   64 (341)
Q Consensus         1 M~~~~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (341)
                      |+-.++|+||||+|                ||..|.+|++.+..+|++|+++.- ....           ..+.++..+.
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g-~~~~-----------~~p~~~~~~~   68 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG-PVSL-----------PTPPFVKRVD   68 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC-SCCC-----------CCCTTEEEEE
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhc-cccc-----------Ccccccccce
Confidence            34456899999876                699999999999999999999876 3221           1223566665


Q ss_pred             cCCCC--hHHHHHHhcCCCEEEEeccCCccccc--h--------hHhHhhhhhhhHHHHHHHHHHhcC
Q 019415           65 AEIYD--PDTFENAIQGCDFVFHVATPLQHIDG--Y--------LYKNVVEACVGAAKKIASFCVKSG  120 (341)
Q Consensus        65 ~Dl~~--~~~~~~~~~~~d~Vi~~a~~~~~~~~--~--------~~~~~~~~nv~~~~~l~~~~~~~~  120 (341)
                      ..-.+  .+.+.+.+.++|++|++|+.......  .        .....+...+.-+..++....+..
T Consensus        69 ~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf~~~~~~~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~k  136 (223)
T d1u7za_          69 VMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALK  136 (223)
T ss_dssp             CCSHHHHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCS
T ss_pred             ehhhHHHHHHHHhhhccceeEeeeechhhhhhhhhhhhhcccccccccccceeeecCHHHHHHHHhhc
Confidence            43221  13444555689999999998665320  0        000112344555667777776554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.75  E-value=7.2e-05  Score=56.37  Aligned_cols=38  Identities=24%  Similarity=0.336  Sum_probs=34.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      .++||.|+||.|.+|+.+++.|.+.||+|++.+| +...
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~-~~~~   45 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDR-EDWA   45 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECT-TCGG
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccc-cccc
Confidence            3579999999999999999999999999999998 6543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=2.9e-05  Score=59.45  Aligned_cols=35  Identities=29%  Similarity=0.378  Sum_probs=32.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      |||+|+|+ |.+|+.++..|++.|++|+++.| +...
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r-~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLR-VPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-SCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEc-CHHH
Confidence            89999996 99999999999999999999999 7654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.70  E-value=1.4e-05  Score=61.44  Aligned_cols=34  Identities=26%  Similarity=0.394  Sum_probs=31.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      |||.|+| .|.+|+.+++.|.+.||+|++++| +.+
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~-~~~   34 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSR-QQS   34 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CHH
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEEC-Cch
Confidence            7899998 699999999999999999999988 653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.70  E-value=5.1e-05  Score=60.23  Aligned_cols=80  Identities=21%  Similarity=0.264  Sum_probs=51.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--CCCCCceE------EEecCCCChHHHHHHhc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--PGAETRLI------FFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~------~~~~Dl~~~~~~~~~~~   78 (341)
                      |||.|+| .|++|..++..|++.|++|++++. +.   .+.+.+...  +-.++...      .....+.-..++.++++
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~-n~---~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~   75 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDV-SS---TKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVL   75 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CH---HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHH
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeC-CH---HHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHh
Confidence            7899997 999999999999999999999877 54   344444331  10000000      00000111134566777


Q ss_pred             CCCEEEEeccCCc
Q 019415           79 GCDFVFHVATPLQ   91 (341)
Q Consensus        79 ~~d~Vi~~a~~~~   91 (341)
                      ++|+++-|.+...
T Consensus        76 ~~d~i~i~VpTP~   88 (202)
T d1mv8a2          76 DSDVSFICVGTPS   88 (202)
T ss_dssp             TCSEEEECCCCCB
T ss_pred             hCCEEEEecCccc
Confidence            8999999987643

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=0.0001  Score=52.10  Aligned_cols=67  Identities=15%  Similarity=0.190  Sum_probs=53.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~V   83 (341)
                      ..||.|+| +|++|+-++....+.|++|++++. +...          |...-.-+++.+|+.|.+.+.++..  ++|+|
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~-~~~~----------PA~~va~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDR-YADA----------PAMHVAHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEES-STTC----------GGGGGSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcC-CCCC----------chhhcCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            46899999 899999999999999999999987 6543          1111134678899999999988874  57988


Q ss_pred             E
Q 019415           84 F   84 (341)
Q Consensus        84 i   84 (341)
                      .
T Consensus        79 T   79 (111)
T d1kjqa2          79 V   79 (111)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=5.7e-05  Score=58.87  Aligned_cols=83  Identities=13%  Similarity=0.075  Sum_probs=62.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      ++++|||+|+ |-.|++++..|.+.|. +++++.| +.+...+...+.. +.. .-.......|+.+.+.+...+..+|+
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR-~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNR-RDEFFDKALAFAQRVNE-NTDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEEC-SSTTHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeecc-chHHHHHHHHHHHHHHh-hcCcceEeeecccccchhhhhcccce
Confidence            4689999995 7889999999999985 7889999 8776555444322 110 11344667888898889999999999


Q ss_pred             EEEeccCC
Q 019415           83 VFHVATPL   90 (341)
Q Consensus        83 Vi~~a~~~   90 (341)
                      |||+....
T Consensus        94 iIN~Tp~G  101 (182)
T d1vi2a1          94 LTNGTKVG  101 (182)
T ss_dssp             EEECSSTT
T ss_pred             eccccCCc
Confidence            99997653

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.67  E-value=8.9e-05  Score=55.20  Aligned_cols=95  Identities=19%  Similarity=0.196  Sum_probs=54.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC----CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG----YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      |||.|+||||++|+.|++.|++..    .++..++. +......       +....... ...+..+    ...++++|+
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss-~~~~gk~-------~~~~~~~~-~~~~~~~----~~~~~~~Dv   67 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST-SQIGVPA-------PNFGKDAG-MLHDAFD----IESLKQLDA   67 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES-SCCSSBC-------CCSSSCCC-BCEETTC----HHHHTTCSE
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecc-ccccccc-------cccCCcce-eeecccc----hhhhccccE
Confidence            789999999999999999888753    35554444 3222111       11111111 1111222    234578999


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcC-EEEEecccc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVK-RLIYTASVL  132 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~~I~~Ss~~  132 (341)
                      ||.+.....                 +..+...+.+.+ .+ .+|=.|++.
T Consensus        68 vF~alp~~~-----------------s~~~~~~l~~~g-~~~~VIDlSsdf  100 (147)
T d1mb4a1          68 VITCQGGSY-----------------TEKVYPALRQAG-WKGYWIDAASTL  100 (147)
T ss_dssp             EEECSCHHH-----------------HHHHHHHHHHTT-CCSEEEESSSTT
T ss_pred             EEEecCchH-----------------HHHHhHHHHHcC-CceEEEeCCccc
Confidence            998864211                 345666677777 43 577777754

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.67  E-value=0.00014  Score=54.08  Aligned_cols=111  Identities=12%  Similarity=-0.003  Sum_probs=66.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhh-hhHhhhCCC-CCCceEEE-ecCCCChHHHHHHhcCCCE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSK-VDLLKSLPG-AETRLIFF-EAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~-~~~~~~~~~-~~~~~~~~-~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +||.|+|+ |.+|+.++..|+..+ .++..++. +...... ...+..... ......+. ..|.   +    .++++|+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~-~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~---~----~~~~adv   72 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDI-VEGVPQGKALDLYEASPIEGFDVRVTGTNNY---A----DTANSDV   72 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS-SSSHHHHHHHHHHTTHHHHTCCCCEEEESCG---G----GGTTCSE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEee-ccccchhHHHHhhccccccCCCCEEEecCcH---H----HhcCCCE
Confidence            68999995 999999999998887 48888877 6543221 111111000 01122222 2222   2    3568899


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEE
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY  127 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~  127 (341)
                      ||-+||....... ...+.++.|......+++...+.+.-..++.
T Consensus        73 vvitag~~~~~~~-~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          73 IVVTSGAPRKPGM-SREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             EEECCSCC----------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             EEEeeeccCCcCc-chhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence            9999997654332 2347788999999999999999872334444

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.62  E-value=1.4e-05  Score=62.79  Aligned_cols=79  Identities=22%  Similarity=0.118  Sum_probs=51.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      |+||.|+| +|..|.+++..|.+.|++|++..| +.+....+..-..-+...+++.+ .-++.-..+++++++++|+||-
T Consensus         7 m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r-~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iii   83 (189)
T d1n1ea2           7 LNKAVVFG-SGAFGTALAMVLSKKCREVCVWHM-NEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILF   83 (189)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECS-CHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEE
T ss_pred             eceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEe-cHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEE
Confidence            45799999 899999999999999999999999 76443333222211111122221 1122223457888999999988


Q ss_pred             ec
Q 019415           86 VA   87 (341)
Q Consensus        86 ~a   87 (341)
                      +.
T Consensus        84 av   85 (189)
T d1n1ea2          84 VI   85 (189)
T ss_dssp             CS
T ss_pred             cC
Confidence            74

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.62  E-value=0.00015  Score=56.22  Aligned_cols=79  Identities=19%  Similarity=0.273  Sum_probs=52.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCC-CCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPG-AETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      |||.|+| +|..|.+++..|.+.|++|++..| ..+. ...+.+..... ..-.......++.-..++.++++++|+||.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r-~~~~-~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~   77 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGT-EFDT-EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLL   77 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHCCEEEEECC-GGGH-HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEe-cccH-HHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhc
Confidence            7999999 799999999999999999999988 5433 33333322100 000111112223335678899999999988


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      +..
T Consensus        78 avp   80 (180)
T d1txga2          78 GVS   80 (180)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.59  E-value=0.00029  Score=52.62  Aligned_cols=114  Identities=11%  Similarity=0.026  Sum_probs=72.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhh-hHhh---hCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKV-DLLK---SLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      ++||.|+|+ |.+|++++..|...+ .++.++++ +....... ..+.   ....  ....+...+  +.    +.++++
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di-~~~~~~g~a~Dl~~~~~~~~--~~~~v~~~~--~~----~~~~~a   72 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDI-VKNMPHGKALDTSHTNVMAY--SNCKVSGSN--TY----DDLAGA   72 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECS-SSSHHHHHHHHHHTHHHHHT--CCCCEEEEC--CG----GGGTTC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEec-cCCcceeeecchhhhccccC--CCcEEEecc--cc----cccCCC
Confidence            368999995 999999998888776 47888877 66442211 1111   1111  122233222  22    345689


Q ss_pred             CEEEEeccCCcccc----chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEec
Q 019415           81 DFVFHVATPLQHID----GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTA  129 (341)
Q Consensus        81 d~Vi~~a~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~S  129 (341)
                      |+||-+|+......    .......+..|....+.+++.+.+...-..++.+|
T Consensus        73 dvvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          73 DVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             SEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99999999655432    12244778999999999999999987333444443

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.56  E-value=9.8e-05  Score=56.02  Aligned_cols=73  Identities=22%  Similarity=0.188  Sum_probs=52.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++++|||+|+ |-+|+.+++.|.+.|. +|++..| +..+   .+.+....    +.+.     .+.+++.+.+.++|+|
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nR-t~~k---a~~l~~~~----~~~~-----~~~~~~~~~l~~~Div   88 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANR-TYER---AVELARDL----GGEA-----VRFDELVDHLARSDVV   88 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECS-SHHH---HHHHHHHH----TCEE-----CCGGGHHHHHHTCSEE
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcC-cHHH---HHHHHHhh----hccc-----ccchhHHHHhccCCEE
Confidence            5689999996 9999999999999996 6998888 5433   33332210    1222     2345688888999999


Q ss_pred             EEeccCCc
Q 019415           84 FHVATPLQ   91 (341)
Q Consensus        84 i~~a~~~~   91 (341)
                      |.+.+...
T Consensus        89 i~atss~~   96 (159)
T d1gpja2          89 VSATAAPH   96 (159)
T ss_dssp             EECCSSSS
T ss_pred             EEecCCCC
Confidence            99977544

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.53  E-value=0.00015  Score=56.37  Aligned_cols=77  Identities=21%  Similarity=0.141  Sum_probs=52.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      ++.+|||+||+|-+|...++.....|.+|++++| +.   ++.+.+....   ....+..-|-...+.+.+...  ++|+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~-~~---~~~~~~~~~G---a~~vi~~~~~~~~~~~~~~~~~~Gvd~  101 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAG-SD---EKIAYLKQIG---FDAAFNYKTVNSLEEALKKASPDGYDC  101 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEES-SH---HHHHHHHHTT---CSEEEETTSCSCHHHHHHHHCTTCEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCC-CH---HHHHHHHhhh---hhhhcccccccHHHHHHHHhhcCCCce
Confidence            4679999999999999999999999999999998 54   3444444431   122222222222333333333  5999


Q ss_pred             EEEecc
Q 019415           83 VFHVAT   88 (341)
Q Consensus        83 Vi~~a~   88 (341)
                      ||++.|
T Consensus       102 v~D~vG  107 (182)
T d1v3va2         102 YFDNVG  107 (182)
T ss_dssp             EEESSC
T ss_pred             eEEecC
Confidence            999976

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=0.00033  Score=52.63  Aligned_cols=74  Identities=16%  Similarity=0.204  Sum_probs=57.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCch-hhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK-SKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVF   84 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi   84 (341)
                      .+|+|+| .|-+|..+++.|.+.|++|+++.. ++... ........     .++.++.||.++++.++++ +++++.||
T Consensus         4 nHiII~G-~g~~g~~l~~~L~~~~~~v~vId~-d~~~~~~~~~~~~~-----~~~~vi~Gd~~d~~~L~~a~i~~a~~vi   76 (153)
T d1id1a_           4 DHFIVCG-HSILAINTILQLNQRGQNVTVISN-LPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRAIL   76 (153)
T ss_dssp             SCEEEEC-CSHHHHHHHHHHHHTTCCEEEEEC-CCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEec-cchhHHHHHHHhhc-----CCcEEEEccCcchHHHHHhccccCCEEE
Confidence            4799999 589999999999999999999887 65431 12222221     3789999999999988766 46789998


Q ss_pred             Eec
Q 019415           85 HVA   87 (341)
Q Consensus        85 ~~a   87 (341)
                      -+.
T Consensus        77 ~~~   79 (153)
T d1id1a_          77 ALS   79 (153)
T ss_dssp             ECS
T ss_pred             Ecc
Confidence            774

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.51  E-value=7.5e-05  Score=48.88  Aligned_cols=41  Identities=27%  Similarity=0.266  Sum_probs=35.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhh
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSK   46 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~   46 (341)
                      ++++|||+||+|-+|...++.+...|.+|+++++ +.++.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~-s~~k~~~   71 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSG-RESTHEY   71 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CGGGHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEEC-CHHHHHH
Confidence            4578999999999999999999999999999998 7655333

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.51  E-value=0.00014  Score=56.02  Aligned_cols=74  Identities=22%  Similarity=0.148  Sum_probs=50.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+.+|||+||+|-+|...++.+...|.+|+++++ +.++   .+.++.+     +...+ .|..+.........++|+||
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~-~~~~---~~~~~~l-----Ga~~~-i~~~~~~~~~~~~~g~D~v~   96 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS-RPEK---LALPLAL-----GAEEA-ATYAEVPERAKAWGGLDLVL   96 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-SGGG---SHHHHHT-----TCSEE-EEGGGHHHHHHHTTSEEEEE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccc-cccc---ccccccc-----cccee-eehhhhhhhhhccccccccc
Confidence            4679999999999999999999999999999988 6543   3344333     11111 23333322233345799999


Q ss_pred             Eecc
Q 019415           85 HVAT   88 (341)
Q Consensus        85 ~~a~   88 (341)
                      ++.|
T Consensus        97 d~~G  100 (171)
T d1iz0a2          97 EVRG  100 (171)
T ss_dssp             ECSC
T ss_pred             cccc
Confidence            9876

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.48  E-value=0.00011  Score=57.08  Aligned_cols=31  Identities=13%  Similarity=0.309  Sum_probs=26.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTT   36 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~   36 (341)
                      |+||.|+||||++|..|++.|.++. .++..+
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l   32 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITAL   32 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEee
Confidence            5899999999999999999999984 566544

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.47  E-value=0.00034  Score=52.54  Aligned_cols=65  Identities=23%  Similarity=0.262  Sum_probs=45.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |||.|+| .|.+|+.+++.|+++|++|++..| +.+..........      ++  .       ++..++++++|+||-+
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~------~~--~-------~~~~e~~~~~diIi~~   63 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLE-GRSPSTIERARTV------GV--T-------ETSEEDVYSCPVVISA   63 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCEEEECCT-TCCHHHHHHHHHH------TC--E-------ECCHHHHHTSSEEEEC
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcC-chhHHHHHhhhcc------cc--c-------ccHHHHHhhcCeEEEE
Confidence            7899998 899999999999999999999877 5544222221111      11  1       1234567789999988


Q ss_pred             cc
Q 019415           87 AT   88 (341)
Q Consensus        87 a~   88 (341)
                      ..
T Consensus        64 v~   65 (152)
T d1i36a2          64 VT   65 (152)
T ss_dssp             SC
T ss_pred             ec
Confidence            54

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.45  E-value=0.00017  Score=55.46  Aligned_cols=33  Identities=15%  Similarity=0.252  Sum_probs=27.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLR   38 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r   38 (341)
                      |+||.|+||||++|..|++.|.+.. .++..+..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s   34 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSS   34 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeec
Confidence            5799999999999999999999875 46665544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=0.00014  Score=55.99  Aligned_cols=74  Identities=14%  Similarity=0.082  Sum_probs=51.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHH---Hhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFEN---AIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~---~~~--~   79 (341)
                      ++.+|||+||+|-+|...++.+...|.+|+++++ +.   ++.+.+.++.    --++  .|..+++..++   ...  +
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~-~~---~~~~~~~~~G----a~~v--i~~~~~~~~~~i~~~t~~~g   97 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAG-TE---EGQKIVLQNG----AHEV--FNHREVNYIDKIKKYVGEKG   97 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEES-SH---HHHHHHHHTT----CSEE--EETTSTTHHHHHHHHHCTTC
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccc-cc---cccccccccC----cccc--cccccccHHHHhhhhhccCC
Confidence            4679999999999999999999999999999988 54   3344444432    1122  35555443333   332  4


Q ss_pred             CCEEEEecc
Q 019415           80 CDFVFHVAT   88 (341)
Q Consensus        80 ~d~Vi~~a~   88 (341)
                      .|+||.+.+
T Consensus        98 ~d~v~d~~g  106 (174)
T d1yb5a2          98 IDIIIEMLA  106 (174)
T ss_dssp             EEEEEESCH
T ss_pred             ceEEeeccc
Confidence            899999865

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.42  E-value=0.00036  Score=50.60  Aligned_cols=30  Identities=23%  Similarity=0.264  Sum_probs=27.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTT   36 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~   36 (341)
                      |||.|.|++|.+|+.+.+.+.+.|+++.+.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~   30 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK   30 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence            789999999999999999999999987764

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.0011  Score=45.11  Aligned_cols=73  Identities=14%  Similarity=0.185  Sum_probs=50.4

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      .+++||+|+|. |-.|.++++.|.++|++|++.++ +.... ..+.+   .   ....++.+.. +.    ..+.+.|.|
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~-~~~~~-~~~~~---~---~~~~~~~~~~-~~----~~~~~~d~v   68 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDT-RMTPP-GLDKL---P---EAVERHTGSL-ND----EWLMAADLI   68 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEES-SSSCT-TGGGS---C---TTSCEEESBC-CH----HHHHHCSEE
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeC-CcCch-hHHHH---h---hccceeeccc-ch----hhhccCCEE
Confidence            46789999995 88999999999999999999988 65431 11111   1   2444555543 22    234577999


Q ss_pred             EEeccCC
Q 019415           84 FHVATPL   90 (341)
Q Consensus        84 i~~a~~~   90 (341)
                      |-.-|..
T Consensus        69 i~SPGi~   75 (93)
T d2jfga1          69 VASPGIA   75 (93)
T ss_dssp             EECTTSC
T ss_pred             EECCCCC
Confidence            9987764

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.34  E-value=9.3e-05  Score=56.36  Aligned_cols=65  Identities=25%  Similarity=0.338  Sum_probs=47.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |||.|+| .|.+|+.+++.|++.||+|++.+| +..   +.+.+...     +...       ..+..++++++|+||-|
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~-~~~---~~~~~~~~-----~~~~-------~~~~~e~~~~~d~ii~~   63 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDR-NPE---AIADVIAA-----GAET-------ASTAKAIAEQCDVIITM   63 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-CHH---HHHHHHHT-----TCEE-------CSSHHHHHHHCSEEEEC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeC-Ccc---hhHHHHHh-----hhhh-------cccHHHHHhCCCeEEEE
Confidence            7899998 899999999999999999999988 653   33444332     1211       12345667788999888


Q ss_pred             cc
Q 019415           87 AT   88 (341)
Q Consensus        87 a~   88 (341)
                      ..
T Consensus        64 v~   65 (161)
T d1vpda2          64 LP   65 (161)
T ss_dssp             CS
T ss_pred             cC
Confidence            53

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.31  E-value=0.00015  Score=55.20  Aligned_cols=66  Identities=23%  Similarity=0.305  Sum_probs=47.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      |+||.++| .|.+|+.+++.|++.||+|.+.+| +...   .+.+....     .       .......+.+..+|+|+-
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~-~~~~---~~~~~~~~-----~-------~~~~~~~e~~~~~diii~   63 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDL-VQSA---VDGLVAAG-----A-------SAARSARDAVQGADVVIS   63 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECS-SHHH---HHHHHHTT-----C-------EECSSHHHHHTSCSEEEE
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEEC-chhh---hhhhhhhh-----c-------cccchhhhhccccCeeee
Confidence            46899998 999999999999999999999988 6533   33333321     0       011235567778898888


Q ss_pred             ecc
Q 019415           86 VAT   88 (341)
Q Consensus        86 ~a~   88 (341)
                      |..
T Consensus        64 ~v~   66 (162)
T d3cuma2          64 MLP   66 (162)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            754

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.30  E-value=0.00018  Score=55.86  Aligned_cols=33  Identities=15%  Similarity=0.476  Sum_probs=27.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEe
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTL   37 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~   37 (341)
                      +++||.|+||||++|+.|++.|.+.. .++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            46799999999999999999999985 4665553

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.28  E-value=0.0003  Score=53.30  Aligned_cols=96  Identities=20%  Similarity=0.318  Sum_probs=55.7

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHC-CCeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCC
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCD   81 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   81 (341)
                      ++.+||.|.|++|.+|+.+++.+.+. +.++.+. .| .... ..-..+..+.+..+.-..+.      .++...++.+|
T Consensus         2 ~s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~-~~~~-~~g~d~~~~~~~~~~~~~~~------~~~~~~~~~~D   73 (162)
T d1diha1           2 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER-EGSS-LLGSDAGELAGAGKTGVTVQ------SSLDAVKDDFD   73 (162)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC-TTCT-TCSCCTTCSSSSSCCSCCEE------SCSTTTTTSCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec-ccch-hccchhhhhhccccCCceee------ccHHHHhcccc
Confidence            35689999999999999999999887 5676554 44 2221 11111111111100001112      22344667899


Q ss_pred             EEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEE
Q 019415           82 FVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLI  126 (341)
Q Consensus        82 ~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I  126 (341)
                      +||.+.-+                 .++...++.|.+.+  ..+|
T Consensus        74 ViIDFs~p-----------------~~~~~~~~~a~~~~--~~~V   99 (162)
T d1diha1          74 VFIDFTRP-----------------EGTLNHLAFCRQHG--KGMV   99 (162)
T ss_dssp             EEEECSCH-----------------HHHHHHHHHHHHTT--CEEE
T ss_pred             eEEEeccH-----------------HHHHHHHHHHHhcc--ceeE
Confidence            99998332                 12456778888888  4444

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.25  E-value=0.0002  Score=53.88  Aligned_cols=65  Identities=20%  Similarity=0.198  Sum_probs=46.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |||.++| +|.+|+++++.|++.|++|++..| +.++   .+.+....    ++.+       ..+..++++++|+||-+
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r-~~~~---~~~l~~~~----g~~~-------~~~~~~~~~~~dvIila   64 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGS-SLER---SKEIAEQL----ALPY-------AMSHQDLIDQVDLVILG   64 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECS-SHHH---HHHHHHHH----TCCB-------CSSHHHHHHTCSEEEEC
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcC-hHHh---HHhhcccc----ceee-------echhhhhhhccceeeee
Confidence            7899998 999999999999999999999888 6533   33332211    1111       12356667789999877


Q ss_pred             c
Q 019415           87 A   87 (341)
Q Consensus        87 a   87 (341)
                      .
T Consensus        65 v   65 (152)
T d2ahra2          65 I   65 (152)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.00023  Score=55.07  Aligned_cols=75  Identities=9%  Similarity=0.017  Sum_probs=51.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHhc--C
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAIQ--G   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~--~   79 (341)
                      .+.+|||+||+|-+|..+++.+...|.+|+++++ +..+   .+.++.+-    --++  .|..+++   .+.++-.  +
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~-s~~k---~~~~~~lG----a~~v--i~~~~~d~~~~v~~~t~g~g   97 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVG-TAQK---AQSALKAG----AWQV--INYREEDLVERLKEITGGKK   97 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEES-SHHH---HHHHHHHT----CSEE--EETTTSCHHHHHHHHTTTCC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeeccc-chHH---HHHHHhcC----CeEE--EECCCCCHHHHHHHHhCCCC
Confidence            3579999999999999999999999999999988 6544   34444431    1122  3555543   3333322  4


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      +|+|+.+++.
T Consensus        98 ~d~v~d~~g~  107 (179)
T d1qora2          98 VRVVYDSVGR  107 (179)
T ss_dssp             EEEEEECSCG
T ss_pred             eEEEEeCccH
Confidence            7999999763

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.19  E-value=0.0011  Score=50.91  Aligned_cols=75  Identities=16%  Similarity=0.194  Sum_probs=47.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      |||.|+| .|.+|..+++.|++.||+|++.+| +.++...+..............  .  ..+.+.+...+..++.++-+
T Consensus         2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr-~~~~~~~l~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~   75 (178)
T d1pgja2           2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNR-TYSKSEEFMKANASAPFAGNLK--A--FETMEAFAASLKKPRKALIL   75 (178)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SHHHHHHHHHHTTTSTTGGGEE--E--CSCHHHHHHHBCSSCEEEEC
T ss_pred             CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEEC-CHHHHHHHHHcCCccccccchh--h--hhhhhHHHHhcccceEEEEe
Confidence            7899999 999999999999999999999988 6644332222211111111111  1  22445566666666666655


Q ss_pred             c
Q 019415           87 A   87 (341)
Q Consensus        87 a   87 (341)
                      .
T Consensus        76 ~   76 (178)
T d1pgja2          76 V   76 (178)
T ss_dssp             C
T ss_pred             e
Confidence            4

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.11  E-value=0.0038  Score=41.72  Aligned_cols=74  Identities=16%  Similarity=0.138  Sum_probs=51.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      .|||.++|-.|-==+.|++.|.++|++|++.++ ...  +..+.|+..     ++.+..+.  +++.    +++.|.||.
T Consensus         1 ~~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~-~~~--~~t~~L~~~-----Gi~i~~gh--~~~~----i~~~d~vV~   66 (89)
T d1j6ua1           1 HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNI-EET--ERTAYLRKL-----GIPIFVPH--SADN----WYDPDLVIK   66 (89)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECS-SCC--HHHHHHHHT-----TCCEESSC--CTTS----CCCCSEEEE
T ss_pred             CcEEEEEeECHHHHHHHHHHHHhCCCeEEEEeC-CCC--hhHHHHHHC-----CCeEEeee--cccc----cCCCCEEEE
Confidence            378999886665556799999999999999988 643  444456653     56565542  2222    357899999


Q ss_pred             eccCCccc
Q 019415           86 VATPLQHI   93 (341)
Q Consensus        86 ~a~~~~~~   93 (341)
                      ..|+...+
T Consensus        67 SsAI~~~n   74 (89)
T d1j6ua1          67 TPAVRDDN   74 (89)
T ss_dssp             CTTCCTTC
T ss_pred             ecCcCCCC
Confidence            98876543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.11  E-value=0.00041  Score=53.71  Aligned_cols=74  Identities=19%  Similarity=0.157  Sum_probs=51.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHh--cC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAI--QG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~--~~   79 (341)
                      ++.+|||+||+|-+|...++.+...|.+|+++++ +.   ++.+.++..- .  . ++  .|..+++   .+.+..  ++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~-~~---~~~~~l~~~G-a--~-~v--i~~~~~~~~~~v~~~t~~~g   94 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAG-SD---AKREMLSRLG-V--E-YV--GDSRSVDFADEILELTDGYG   94 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEES-SH---HHHHHHHTTC-C--S-EE--EETTCSTHHHHHHHHTTTCC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeec-cc---cccccccccc-c--c-cc--ccCCccCHHHHHHHHhCCCC
Confidence            4579999999999999999999889999999988 54   3445555431 1  1 22  2344433   333333  25


Q ss_pred             CCEEEEecc
Q 019415           80 CDFVFHVAT   88 (341)
Q Consensus        80 ~d~Vi~~a~   88 (341)
                      +|+||.+.+
T Consensus        95 ~d~v~d~~g  103 (183)
T d1pqwa_          95 VDVVLNSLA  103 (183)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEeccc
Confidence            899999987

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.08  E-value=0.0027  Score=44.71  Aligned_cols=94  Identities=11%  Similarity=0.152  Sum_probs=62.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|||+| +|.+|..-++.|++.|.+|++++. ....  ....+..    ...+.++..++.+.     .+.+.+.|+
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~-~~~~--~~~~~~~----~~~i~~~~~~~~~~-----dl~~~~lv~   77 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAGARLTVNAL-TFIP--QFTVWAN----EGMLTLVEGPFDET-----LLDSCWLAI   77 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEES-SCCH--HHHHHHT----TTSCEEEESSCCGG-----GGTTCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEec-cCCh--HHHHHHh----cCCceeeccCCCHH-----HhCCCcEEe
Confidence            568999999 899999999999999999999877 5543  2222222    13677777666542     245778887


Q ss_pred             EeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           85 HVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        85 ~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      -+.+...                -...+.+.|++.+   .+|++..
T Consensus        78 ~at~d~~----------------~n~~i~~~a~~~~---ilVNv~D  104 (113)
T d1pjqa1          78 AATDDDT----------------VNQRVSDAAESRR---IFCNVVD  104 (113)
T ss_dssp             ECCSCHH----------------HHHHHHHHHHHTT---CEEEETT
T ss_pred             ecCCCHH----------------HHHHHHHHHHHcC---CEEEeCC
Confidence            6632211                1235677788776   4566544

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.03  E-value=0.0014  Score=49.84  Aligned_cols=76  Identities=14%  Similarity=0.117  Sum_probs=49.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecC--CCChHHHHHHh-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAE--IYDPDTFENAI-----   77 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D--l~~~~~~~~~~-----   77 (341)
                      .+.+|+|+| +|-||...++.+...|.+|+++++ +..+   .+..+.+-   .+. .+..|  -.+...+.+.+     
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~-~~~r---~~~a~~~g---a~~-~~~~~~~~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTAR-SPRR---LEVAKNCG---ADV-TLVVDPAKEEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHTT---CSE-EEECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccch-HHHH---HHHHHHcC---CcE-EEeccccccccchhhhhhhcccc
Confidence            456899997 789999999999999999999988 6644   44444331   122 22222  23333343333     


Q ss_pred             cCCCEEEEeccC
Q 019415           78 QGCDFVFHVATP   89 (341)
Q Consensus        78 ~~~d~Vi~~a~~   89 (341)
                      .++|+||.+++.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence            258999999874

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.02  E-value=0.0005  Score=51.69  Aligned_cols=25  Identities=36%  Similarity=0.583  Sum_probs=22.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY   31 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~   31 (341)
                      -||.|+||||++|..|++.|.++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCC
Confidence            3799999999999999999988854

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.00  E-value=0.00088  Score=51.04  Aligned_cols=77  Identities=17%  Similarity=0.118  Sum_probs=51.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+.+|+|+|+ |-+|...++.+...|.+|+++++ +..+.+....+..      + +++.. ..+.+..+...++.|+|+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~-~~~k~~~a~~lGa------~-~~i~~-~~~~~~~~~~~~~~d~vi   96 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISR-SSRKREDAMKMGA------D-HYIAT-LEEGDWGEKYFDTFDLIV   96 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEES-SSTTHHHHHHHTC------S-EEEEG-GGTSCHHHHSCSCEEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhcccccccccc-chhHHHHhhccCC------c-EEeec-cchHHHHHhhhcccceEE
Confidence            4679999996 99999999888888999999999 7765443333321      1 22221 112333445556789999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      .+.+...
T Consensus        97 ~~~~~~~  103 (168)
T d1piwa2          97 VCASSLT  103 (168)
T ss_dssp             ECCSCST
T ss_pred             EEecCCc
Confidence            9977544

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.00  E-value=0.00051  Score=52.82  Aligned_cols=74  Identities=20%  Similarity=0.209  Sum_probs=48.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHh--cCCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAI--QGCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~--~~~d~   82 (341)
                      +.+|||.||+|-+|...++.+...|.+|+++++ +..+......+..      + +.+  |..+. +......  +++|+
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~-s~~k~~~~~~lGa------~-~vi--~~~~~~~~~~~~~~~~gvD~  101 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTG-KAAEHDYLRVLGA------K-EVL--AREDVMAERIRPLDKQRWAA  101 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CTTCHHHHHHTTC------S-EEE--ECC---------CCSCCEEE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecC-chHHHHHHHhccc------c-eee--ecchhHHHHHHHhhccCcCE
Confidence            457999999999999999999999999999999 7765444443322      1 122  22221 1122222  26899


Q ss_pred             EEEeccC
Q 019415           83 VFHVATP   89 (341)
Q Consensus        83 Vi~~a~~   89 (341)
                      ||++.+-
T Consensus       102 vid~vgg  108 (176)
T d1xa0a2         102 AVDPVGG  108 (176)
T ss_dssp             EEECSTT
T ss_pred             EEEcCCc
Confidence            9999773

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.98  E-value=0.0041  Score=47.51  Aligned_cols=73  Identities=15%  Similarity=0.239  Sum_probs=51.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFHV   86 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~~   86 (341)
                      .+|.|+| .|.+|..+++.|++.||+|++.+| +.++   .+.+..........  .  -....+++...+..+|.++-+
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr-~~~~---~~~l~~~~~~~~~~--~--~a~~~~~~~~~~~~~~~ii~~   73 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNR-TVSK---VDDFLANEAKGTKV--L--GAHSLEEMVSKLKKPRRIILL   73 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-STHH---HHHHHHTTTTTSSC--E--ECSSHHHHHHHBCSSCEEEEC
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcC-CHHH---HHHHHHhccccccc--c--chhhhhhhhhhhcccceEEEe
Confidence            5799999 899999999999999999999999 7644   33333321110011  1  133567788888899999887


Q ss_pred             cc
Q 019415           87 AT   88 (341)
Q Consensus        87 a~   88 (341)
                      ..
T Consensus        74 ~~   75 (176)
T d2pgda2          74 VK   75 (176)
T ss_dssp             SC
T ss_pred             cC
Confidence            53

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.0011  Score=50.43  Aligned_cols=74  Identities=19%  Similarity=0.183  Sum_probs=52.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+.+|||.|+ |-||...++.+...|.+|+++++ +..+......+..      + +  ..|..+.+......++.|++|
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~-~~~~~~~a~~lGa------d-~--~i~~~~~~~~~~~~~~~D~vi   98 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTT-SEAKREAAKALGA------D-E--VVNSRNADEMAAHLKSFDFIL   98 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-SGGGHHHHHHHTC------S-E--EEETTCHHHHHTTTTCEEEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhcc-chhHHHHHhccCC------c-E--EEECchhhHHHHhcCCCceee
Confidence            4679999986 88999999999889999998888 6654333332221      1 1  235666666666667899999


Q ss_pred             EeccC
Q 019415           85 HVATP   89 (341)
Q Consensus        85 ~~a~~   89 (341)
                      .+.+.
T Consensus        99 d~~g~  103 (168)
T d1uufa2          99 NTVAA  103 (168)
T ss_dssp             ECCSS
T ss_pred             eeeec
Confidence            99874

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.89  E-value=0.012  Score=39.88  Aligned_cols=74  Identities=15%  Similarity=0.106  Sum_probs=51.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ..++|.++|-.|--=+.|++.|.++|++|++.++ ...  ...+.+...     ++.+..++-  ++    .+.+.|.||
T Consensus         7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~-~~~--~~~~~L~~~-----Gi~v~~g~~--~~----~i~~~d~vV   72 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDI-ADG--VVTQRLAQA-----GAKIYIGHA--EE----HIEGASVVV   72 (96)
T ss_dssp             TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEES-CCS--HHHHHHHHT-----TCEEEESCC--GG----GGTTCSEEE
T ss_pred             hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeC-CCC--hhhhHHHHC-----CCeEEECCc--cc----cCCCCCEEE
Confidence            4578999885554447789999999999999988 643  334444442     666666553  22    235789999


Q ss_pred             EeccCCcc
Q 019415           85 HVATPLQH   92 (341)
Q Consensus        85 ~~a~~~~~   92 (341)
                      ...|....
T Consensus        73 ~S~AI~~~   80 (96)
T d1p3da1          73 VSSAIKDD   80 (96)
T ss_dssp             ECTTSCTT
T ss_pred             ECCCcCCC
Confidence            99887544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.87  E-value=0.00048  Score=52.70  Aligned_cols=35  Identities=29%  Similarity=0.353  Sum_probs=29.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNLE   42 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~   42 (341)
                      |++|+|+| .|.+|..+++.|.+.|+  +|++++| +..
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~-~~~   37 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDI-NPE   37 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECS-CHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEEC-ChH
Confidence            35799998 79999999999999986  6888877 653

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.84  E-value=0.00024  Score=54.26  Aligned_cols=43  Identities=33%  Similarity=0.342  Sum_probs=35.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHh
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLL   50 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~   50 (341)
                      ..|||+||+|-+|...++.....|.+|+++++ +.++...+..+
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~~~~l   67 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTG-NREAADYLKQL   67 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEES-SSSTHHHHHHH
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEec-CHHHHHHHHhh
Confidence            46999999999999999888888999999999 77654444444

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.72  E-value=0.0022  Score=49.36  Aligned_cols=76  Identities=13%  Similarity=0.163  Sum_probs=48.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHH----HHHhc-
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTF----ENAIQ-   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~----~~~~~-   78 (341)
                      .+.+|||+|+ |-||...++.+...|. +|+++++ +..+   .+..+.+-    --+++...-.+..+.    .+... 
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~-~~~~---~~~a~~lG----a~~vi~~~~~~~~~~~~~i~~~~~~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAG-SPNR---LKLAEEIG----ADLTLNRRETSVEERRKAIMDITHG   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEES-CHHH---HHHHHHTT----CSEEEETTTSCHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccc-cccc---cccccccc----ceEEEeccccchHHHHHHHHHhhCC
Confidence            4579999996 8899999999999996 7999888 6644   34444431    112332222232222    22222 


Q ss_pred             -CCCEEEEeccC
Q 019415           79 -GCDFVFHVATP   89 (341)
Q Consensus        79 -~~d~Vi~~a~~   89 (341)
                       ++|+||.+++.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence             48999999865

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.68  E-value=0.0027  Score=48.80  Aligned_cols=63  Identities=21%  Similarity=0.146  Sum_probs=48.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+| .|-||+.+++.|..-|.+|++.+| ....                     .+..-.++++++++.+|+|+
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~-~~~~---------------------~~~~~~~~l~ell~~sDiv~   97 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSR-TPKE---------------------GPWRFTNSLEEALREARAAV   97 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECS-SCCC---------------------SSSCCBSCSHHHHTTCSEEE
T ss_pred             cCceEEEec-cccccccceeeeeccccccccccc-cccc---------------------cceeeeechhhhhhccchhh
Confidence            467999999 899999999999999999999988 5432                     01111235778999999998


Q ss_pred             EeccCC
Q 019415           85 HVATPL   90 (341)
Q Consensus        85 ~~a~~~   90 (341)
                      .+....
T Consensus        98 ~~~pl~  103 (181)
T d1qp8a1          98 CALPLN  103 (181)
T ss_dssp             ECCCCS
T ss_pred             cccccc
Confidence            766543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.66  E-value=0.0038  Score=46.83  Aligned_cols=79  Identities=22%  Similarity=0.206  Sum_probs=61.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVFH   85 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi~   85 (341)
                      +-+|+|+| .|-.|..-++.....|.+|+++++ +....+.++....     ..+++.   ..+.+.+++.++++|+||.
T Consensus        32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~-~~~~l~~l~~~~~-----~~~~~~---~~~~~~l~~~~~~aDivI~  101 (168)
T d1pjca1          32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDI-NVERLSYLETLFG-----SRVELL---YSNSAEIETAVAEADLLIG  101 (168)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-CHHHHHHHHHHHG-----GGSEEE---ECCHHHHHHHHHTCSEEEE
T ss_pred             CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeC-cHHHHHHHHHhhc-----ccceee---hhhhhhHHHhhccCcEEEE
Confidence            45899999 899999999999999999999999 7755444443322     133333   3467889999999999999


Q ss_pred             eccCCcccc
Q 019415           86 VATPLQHID   94 (341)
Q Consensus        86 ~a~~~~~~~   94 (341)
                      ++-..+...
T Consensus       102 aalipG~~a  110 (168)
T d1pjca1         102 AVLVPGRRA  110 (168)
T ss_dssp             CCCCTTSSC
T ss_pred             eeecCCccc
Confidence            998766554

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.63  E-value=0.002  Score=46.54  Aligned_cols=69  Identities=14%  Similarity=0.076  Sum_probs=52.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHH-hcCCCEEEE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENA-IQGCDFVFH   85 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~d~Vi~   85 (341)
                      ++|+|+| -|-+|+.+++.|.  |++|.++.. ++..   .+.+..     .++.++.||.++++.+.++ +++++.+|-
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~-d~~~---~~~~~~-----~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~   68 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAE-DENV---RKKVLR-----SGANFVHGDPTRVSDLEKANVRGARAVIV   68 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEES-CTTH---HHHHHH-----TTCEEEESCTTSHHHHHHTTCTTCSEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEc-chHH---HHHHHh-----cCccccccccCCHHHHHHhhhhcCcEEEE
Confidence            4689998 6889999999994  567888777 6643   333333     3788999999999988876 467888886


Q ss_pred             ec
Q 019415           86 VA   87 (341)
Q Consensus        86 ~a   87 (341)
                      +.
T Consensus        69 ~~   70 (129)
T d2fy8a1          69 NL   70 (129)
T ss_dssp             CC
T ss_pred             ec
Confidence            53

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.55  E-value=0.0025  Score=48.47  Aligned_cols=74  Identities=12%  Similarity=0.179  Sum_probs=47.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|||+| +|-.+++++..|.+.|.+|+++.| +.++...+...  .... ..+...  ++.+.     ....+|+||
T Consensus        17 ~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nR-t~~ka~~l~~~--~~~~-~~~~~~--~~~~~-----~~~~~dliI   84 (170)
T d1nyta1          17 PGLRILLIG-AGGASRGVLLPLLSLDCAVTITNR-TVSRAEELAKL--FAHT-GSIQAL--SMDEL-----EGHEFDLII   84 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SHHHHHHHHHH--TGGG-SSEEEC--CSGGG-----TTCCCSEEE
T ss_pred             CCCEEEEEC-CcHHHHHHHHHhcccceEEEeccc-hHHHHHHHHHH--Hhhc-cccccc--ccccc-----cccccceee
Confidence            568999999 577799999999999999999999 76543322221  1111 123332  22221     124689999


Q ss_pred             EeccCC
Q 019415           85 HVATPL   90 (341)
Q Consensus        85 ~~a~~~   90 (341)
                      |+....
T Consensus        85 N~Tp~G   90 (170)
T d1nyta1          85 NATSSG   90 (170)
T ss_dssp             ECCSCG
T ss_pred             cccccC
Confidence            997544

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0064  Score=46.10  Aligned_cols=76  Identities=14%  Similarity=0.141  Sum_probs=51.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-----
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-----   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----   78 (341)
                      .+.+|+|+|+ |-+|...++.+...|. +|+++++ +..   +++..+.+-    --+++..+-.++....+.+.     
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~-~~~---rl~~a~~~G----a~~~~~~~~~~~~~~~~~~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDL-SAT---RLSKAKEIG----ADLVLQISKESPQEIARKVEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES-CHH---HHHHHHHTT----CSEEEECSSCCHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccC-CHH---HHHHHHHhC----CcccccccccccccccccccccCCC
Confidence            4568999985 9999999999999997 7888888 654   344444431    11334444445544444432     


Q ss_pred             CCCEEEEeccC
Q 019415           79 GCDFVFHVATP   89 (341)
Q Consensus        79 ~~d~Vi~~a~~   89 (341)
                      ++|+||.+.+.
T Consensus        97 g~Dvvid~~G~  107 (171)
T d1pl8a2          97 KPEVTIECTGA  107 (171)
T ss_dssp             CCSEEEECSCC
T ss_pred             CceEEEeccCC
Confidence            58999999774

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.48  E-value=0.0024  Score=45.29  Aligned_cols=33  Identities=21%  Similarity=0.274  Sum_probs=30.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .+++|+|+| .|++|-+++..|.+.|.+|+++.|
T Consensus        21 ~p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~   53 (117)
T d1onfa2          21 ESKKIGIVG-SGYIAVELINVIKRLGIDSYIFAR   53 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECS
T ss_pred             CCCEEEEEC-CchHHHHHHHHHHhccccceeeeh
Confidence            468999999 899999999999999999999988

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.47  E-value=0.015  Score=42.11  Aligned_cols=29  Identities=21%  Similarity=0.405  Sum_probs=24.6

Q ss_pred             EEEEecCcchHHHHHHHHHHHC-CCeEEEE
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDK-GYIVHTT   36 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~-g~~V~~~   36 (341)
                      ||.|.|++|.+|+.+++.+.+. ++++.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            7999999999999999988776 5776664

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.46  E-value=0.0029  Score=48.07  Aligned_cols=77  Identities=16%  Similarity=0.153  Sum_probs=48.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHh--cCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAI--QGC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~--~~~   80 (341)
                      .+.+|+|+|++|-+|...++.+...|. +|+++.+ +.   .+.+.++.+-    --+++..+-.|. +.+.+..  .++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~-~~---~~~~~~~~~G----a~~~i~~~~~~~~~~~~~~~~~~~~   98 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV-RE---EAVEAAKRAG----ADYVINASMQDPLAEIRRITESKGV   98 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEES-SH---HHHHHHHHHT----CSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEEeccccceeeeeeccccccccccccccc-ch---hhHHHHHHcC----CceeeccCCcCHHHHHHHHhhcccc
Confidence            456899999999999999999998884 7888777 54   3344444431    112333332232 2222222  248


Q ss_pred             CEEEEeccC
Q 019415           81 DFVFHVATP   89 (341)
Q Consensus        81 d~Vi~~a~~   89 (341)
                      |+||.+++.
T Consensus        99 d~vid~~g~  107 (170)
T d1jvba2          99 DAVIDLNNS  107 (170)
T ss_dssp             EEEEESCCC
T ss_pred             hhhhccccc
Confidence            999999763

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.39  E-value=0.0032  Score=44.57  Aligned_cols=35  Identities=20%  Similarity=0.124  Sum_probs=31.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      .+++++|+| .|++|..++..|.+.|.+|+++.| ..
T Consensus        21 ~p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~-~~   55 (117)
T d1ebda2          21 VPKSLVVIG-GGYIGIELGTAYANFGTKVTILEG-AG   55 (117)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-SS
T ss_pred             cCCeEEEEC-CCccceeeeeeecccccEEEEEEe-cc
Confidence            357999999 899999999999999999999988 54

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.37  E-value=0.012  Score=42.19  Aligned_cols=89  Identities=17%  Similarity=0.144  Sum_probs=58.3

Q ss_pred             CCcEEEEecCc---chHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCC
Q 019415            5 SNFKVCVTGGE---GFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         5 ~~~~ilI~Gat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      +.++|.|+|||   |..|..+.+.|.+.| ++|+.+.. +...   ..          ++.. .-++      .++-..+
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP-~~~~---i~----------G~~~-y~sl------~dlp~~v   65 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNI-KEEE---VQ----------GVKA-YKSV------KDIPDEI   65 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECS-SCSE---ET----------TEEC-BSST------TSCSSCC
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEecc-Cccc---cC----------CeEe-ecch------hhcCCCC
Confidence            56899999998   999999999998766 68888743 3211   00          1111 1122      2233467


Q ss_pred             CEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           81 DFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      |.++-+...                 ..+..+++.|.+.| ++.++.+|+..
T Consensus        66 Dlvvi~vp~-----------------~~~~~~~~~~~~~g-~~~~vi~s~Gf   99 (129)
T d2csua1          66 DLAIIVVPK-----------------RFVKDTLIQCGEKG-VKGVVIITAGF   99 (129)
T ss_dssp             SEEEECSCH-----------------HHHHHHHHHHHHHT-CCEEEECCCSS
T ss_pred             ceEEEecCh-----------------HHhHHHHHHHHHcC-CCEEEEecccc
Confidence            888766331                 22456788899999 89888887753

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=96.37  E-value=0.0026  Score=51.41  Aligned_cols=36  Identities=39%  Similarity=0.506  Sum_probs=32.5

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      .+.+||+|+| .|..|...+..|.++|++|+++.| +.
T Consensus         4 ~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier-~~   39 (268)
T d1c0pa1           4 HSQKRVVVLG-SGVIGLSSALILARKGYSVHILAR-DL   39 (268)
T ss_dssp             CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-SC
T ss_pred             CCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeC-CC
Confidence            4557999999 899999999999999999999998 53

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.37  E-value=0.0015  Score=50.16  Aligned_cols=42  Identities=26%  Similarity=0.242  Sum_probs=35.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhH
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDL   49 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~   49 (341)
                      ..|||+||+|-+|...++.....|.+|++++| +.++......
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~-~~~k~~~~~~   74 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSG-RESTHEYLKS   74 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEES-CGGGHHHHHH
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEec-chhHHHHHHh
Confidence            37999999999999999999999999999999 7655443433

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.32  E-value=0.0034  Score=44.81  Aligned_cols=35  Identities=17%  Similarity=0.191  Sum_probs=31.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      +.++|+|+| +|++|.+++..|.++|.+|+++.| ..
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~-~~   63 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVET-QP   63 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-SS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEee-cc
Confidence            357999999 899999999999999999999988 54

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.30  E-value=0.0072  Score=45.52  Aligned_cols=76  Identities=18%  Similarity=0.178  Sum_probs=46.9

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHhcCCCE
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAIQGCDF   82 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~d~   82 (341)
                      +.+.+|+|.|+ |-+|...++.+...|.+|+++++ +..+   .+..+.+-    -.+++..+-.+ .+.+.+...+.+.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~-~~~~---~~~a~~~G----a~~~i~~~~~~~~~~~~~~~~g~~~   96 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDI-DDAK---LELARKLG----ASLTVNARQEDPVEAIQRDIGGAHG   96 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES-CHHH---HHHHHHTT----CSEEEETTTSCHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecc-hhhH---HHhhhccC----ccccccccchhHHHHHHHhhcCCcc
Confidence            34578999986 89999999999889999999988 6543   34444431    11233222222 2334444445666


Q ss_pred             EEEecc
Q 019415           83 VFHVAT   88 (341)
Q Consensus        83 Vi~~a~   88 (341)
                      +|-+++
T Consensus        97 ~i~~~~  102 (166)
T d1llua2          97 VLVTAV  102 (166)
T ss_dssp             EEECCS
T ss_pred             cccccc
Confidence            665544

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=96.26  E-value=0.0042  Score=44.09  Aligned_cols=35  Identities=23%  Similarity=0.029  Sum_probs=31.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      .+++++|+| +|+||..++..|.+.|.+|+++.| +.
T Consensus        21 ~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~-~~   55 (119)
T d3lada2          21 VPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEA-MD   55 (119)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES-SS
T ss_pred             CCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEe-ec
Confidence            357999999 899999999999999999999988 54

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.26  E-value=0.0036  Score=44.80  Aligned_cols=33  Identities=21%  Similarity=0.226  Sum_probs=30.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      +.++|+|+| .|++|..++..|.+.|.+|+++.|
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~   61 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDI   61 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEe
Confidence            457999998 899999999999999999999988

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.25  E-value=0.0062  Score=45.63  Aligned_cols=58  Identities=17%  Similarity=0.232  Sum_probs=45.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+|.+..+|+.|+..|.++|..|+.... ...                             .+.+..++.|+||
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~-~t~-----------------------------~l~~~~~~ADivI   85 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHR-FTK-----------------------------NLRHHVENADLLI   85 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECS-SCS-----------------------------CHHHHHHHCSEEE
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhcccccccc-ccc-----------------------------hhHHHHhhhhHhh
Confidence            5789999999999999999999999999998644 211                             2445556778888


Q ss_pred             EeccCCcc
Q 019415           85 HVATPLQH   92 (341)
Q Consensus        85 ~~a~~~~~   92 (341)
                      .++|....
T Consensus        86 ~a~G~p~~   93 (166)
T d1b0aa1          86 VAVGKPGF   93 (166)
T ss_dssp             ECSCCTTC
T ss_pred             hhccCccc
Confidence            88876554

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.25  E-value=0.0038  Score=44.57  Aligned_cols=35  Identities=14%  Similarity=0.074  Sum_probs=31.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      .+++++|+| +|+||..++..|.+.|.+|+++.| +.
T Consensus        22 ~p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~-~~   56 (122)
T d1v59a2          22 IPKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEF-QP   56 (122)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SS
T ss_pred             CCCeEEEEC-CCchHHHHHHHHHhhCcceeEEEe-cc
Confidence            357999999 899999999999999999999987 44

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.17  E-value=0.0039  Score=44.07  Aligned_cols=34  Identities=24%  Similarity=0.155  Sum_probs=31.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      +++|+|+| .|++|..++..|.+.|.+|+++.| ..
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~-~~   54 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEM-FD   54 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccccEEEEEee-cc
Confidence            57899999 899999999999999999999988 54

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.16  E-value=0.013  Score=44.50  Aligned_cols=86  Identities=19%  Similarity=0.088  Sum_probs=57.5

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCC-C----CCCceE-------EEecCC--CChHH
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLP-G----AETRLI-------FFEAEI--YDPDT   72 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~----~~~~~~-------~~~~Dl--~~~~~   72 (341)
                      -+|+|+| .|-.|.+-++.....|.+|++++. +..+.+.++.+.... .    .....+       -...+.  ...+.
T Consensus        30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~-~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~  107 (183)
T d1l7da1          30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDV-RAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA  107 (183)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEec-cHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence            4899999 899999999999999999999999 887655555543210 0    000000       000111  12456


Q ss_pred             HHHHhcCCCEEEEeccCCcccc
Q 019415           73 FENAIQGCDFVFHVATPLQHID   94 (341)
Q Consensus        73 ~~~~~~~~d~Vi~~a~~~~~~~   94 (341)
                      +.+.+.++|+||-.+-..+...
T Consensus       108 l~~~l~~aDlVI~talipG~~a  129 (183)
T d1l7da1         108 VLKELVKTDIAITTALIPGKPA  129 (183)
T ss_dssp             HHHHHTTCSEEEECCCCTTSCC
T ss_pred             HHHHHHhhhhheeeeecCCccc
Confidence            7778889999999998776654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.15  E-value=0.0021  Score=47.92  Aligned_cols=34  Identities=24%  Similarity=0.364  Sum_probs=30.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLE   42 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~   42 (341)
                      |||.++| .|.+|+++++.|++.| ++|.+.+| +.+
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r-~~~   35 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANR-GAE   35 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECS-SHH
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeC-Chh
Confidence            7899998 6999999999999887 99999988 653

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.11  E-value=0.0074  Score=46.06  Aligned_cols=84  Identities=15%  Similarity=0.124  Sum_probs=48.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCC---CCc-eEEEecCCCChHHHHHHhcCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGA---ETR-LIFFEAEIYDPDTFENAIQGC   80 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~-~~~~~~Dl~~~~~~~~~~~~~   80 (341)
                      |-||.|-| .|.||+.+++.|.+++ .+|.++.. ..+.......+......   .+. ..+....+.....+..++.++
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~v   78 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAK-TSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTS   78 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEC-SSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHC
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEEC-CCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcC
Confidence            35899998 8999999999999885 68888766 33332222222211000   000 001111112223455566789


Q ss_pred             CEEEEeccCCc
Q 019415           81 DFVFHVATPLQ   91 (341)
Q Consensus        81 d~Vi~~a~~~~   91 (341)
                      |+||-|.+...
T Consensus        79 DiViecTG~f~   89 (178)
T d1b7go1          79 DIVVDTTPNGV   89 (178)
T ss_dssp             SEEEECCSTTH
T ss_pred             CEEEECCCCcC
Confidence            99999988643

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.09  E-value=0.0055  Score=46.56  Aligned_cols=75  Identities=13%  Similarity=0.092  Sum_probs=48.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|+|+| +|-.|++++..|.+.+.+|+++.| +.++.........  . ...+.....|-.       .+..+|+||
T Consensus        17 ~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR-~~~~a~~l~~~~~--~-~~~~~~~~~~~~-------~~~~~diiI   84 (171)
T d1p77a1          17 PNQHVLILG-AGGATKGVLLPLLQAQQNIVLANR-TFSKTKELAERFQ--P-YGNIQAVSMDSI-------PLQTYDLVI   84 (171)
T ss_dssp             TTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEES-SHHHHHHHHHHHG--G-GSCEEEEEGGGC-------CCSCCSEEE
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccCceeeeccc-hHHHHHHHHHHHh--h-ccccchhhhccc-------cccccceee
Confidence            467999999 566799999999998889999999 7644333222111  1 113444443321       245789999


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      |+....-
T Consensus        85 N~tp~g~   91 (171)
T d1p77a1          85 NATSAGL   91 (171)
T ss_dssp             ECCCC--
T ss_pred             ecccccc
Confidence            9976543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.06  E-value=0.0072  Score=45.68  Aligned_cols=37  Identities=24%  Similarity=0.390  Sum_probs=31.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED   43 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~   43 (341)
                      ++++|||+| +|-.|++++..|.+.|. +|+++.| +.++
T Consensus        16 ~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR-~~~k   53 (167)
T d1npya1          16 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYAR-NVKT   53 (167)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECS-CHHH
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecc-cHHH
Confidence            457899999 58899999999999995 7999999 7654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.05  E-value=0.0081  Score=45.57  Aligned_cols=118  Identities=18%  Similarity=0.099  Sum_probs=67.6

Q ss_pred             CcEEEEecCcchHHHH--HHHHHHHC----CCeEEEEecCCCCchhhhhH-hhh-CCCCCCceEEEecCCCChHHHHHHh
Q 019415            6 NFKVCVTGGEGFVGSW--LIKKLLDK----GYIVHTTLRPNLEDKSKVDL-LKS-LPGAETRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      +|||.|+|| |.+|..  ++..|+..    +.++..+++ +..+.+.... +.. .+......++..     ..+.++++
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Di-d~~~~~~~~~~~~~~~~~~~~~~~i~~-----~td~~eaL   74 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDI-DEERLDAILTIAKKYVEEVGADLKFEK-----TMNLDDVI   74 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECS-CHHHHHHHHHHHHHHHHHTTCCCEEEE-----ESCHHHHH
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeC-CchHHHHHHHHHHHHHHhcCCCeEEEE-----eCChhhcc
Confidence            489999995 888865  33344443    358999888 7654322111 111 111112333322     22367788


Q ss_pred             cCCCEEEEeccCCccccchhHhHh-------------------------hhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           78 QGCDFVFHVATPLQHIDGYLYKNV-------------------------VEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        78 ~~~d~Vi~~a~~~~~~~~~~~~~~-------------------------~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      +++|+||..++..........+..                         ..-|+.-.+.+++.+++...-..+|.+|-
T Consensus        75 ~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~TN  152 (171)
T d1obba1          75 IDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAAN  152 (171)
T ss_dssp             TTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             cCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEECC
Confidence            999999999887654321100000                         12377788888888888863445665544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.0031  Score=48.99  Aligned_cols=35  Identities=23%  Similarity=0.262  Sum_probs=31.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      +||.|+|| |.+|+.++..++..|++|+++++ +...
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~-~~~~   39 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQ-TEDI   39 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECS-CHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEEC-ChHH
Confidence            68999995 99999999999999999999988 7644

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.98  E-value=0.0031  Score=49.13  Aligned_cols=66  Identities=17%  Similarity=0.179  Sum_probs=46.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+| .|.||+.+++.|..-|.+|++.++ .....  .   ..             +.....++.++++.+|+|+
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~-~~~~~--~---~~-------------~~~~~~~l~~~l~~sDii~  101 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDI-FRNPE--L---EK-------------KGYYVDSLDDLYKQADVIS  101 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SCCHH--H---HH-------------TTCBCSCHHHHHHHCSEEE
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCc-ccccc--c---cc-------------ceeeecccccccccccccc
Confidence            357999999 999999999999999999999876 43320  0   00             0011234777888889887


Q ss_pred             EeccCC
Q 019415           85 HVATPL   90 (341)
Q Consensus        85 ~~a~~~   90 (341)
                      .+....
T Consensus       102 ~~~plt  107 (197)
T d1j4aa1         102 LHVPDV  107 (197)
T ss_dssp             ECSCCC
T ss_pred             ccCCcc
Confidence            776543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.98  E-value=0.015  Score=43.70  Aligned_cols=58  Identities=16%  Similarity=0.152  Sum_probs=45.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|+|+|.+..+|+.|+..|+++|..|+.... ...                             .+.+..++.|+||
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~-~t~-----------------------------~l~~~~~~aDivi   87 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHS-KTA-----------------------------HLDEEVNKGDILV   87 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT-TCS-----------------------------SHHHHHTTCSEEE
T ss_pred             ccceEEEEecCCccchHHHHHHHhccCceEEEec-ccc-----------------------------cHHHHHhhccchh
Confidence            5789999999999999999999999999998755 221                             1344566778888


Q ss_pred             EeccCCcc
Q 019415           85 HVATPLQH   92 (341)
Q Consensus        85 ~~a~~~~~   92 (341)
                      .++|....
T Consensus        88 ~a~G~~~~   95 (170)
T d1a4ia1          88 VATGQPEM   95 (170)
T ss_dssp             ECCCCTTC
T ss_pred             hccccccc
Confidence            88776554

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.94  E-value=0.0066  Score=39.22  Aligned_cols=35  Identities=29%  Similarity=0.289  Sum_probs=30.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      +|+|.|+| +|++|+-++..-.+.|++|++++- +..
T Consensus         1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp-~~~   35 (78)
T d3etja2           1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGL-DAE   35 (78)
T ss_dssp             CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECT-TSC
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcC-CCC
Confidence            46899999 899999999999999999999866 543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.94  E-value=0.014  Score=44.30  Aligned_cols=77  Identities=19%  Similarity=0.129  Sum_probs=46.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHh--cCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAI--QGC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~~~   80 (341)
                      .+.+|||+|+.| +|...+..+...| .+|+++++ +..+   .+....+- .  ...+...+-.+ .+...+..  .+.
T Consensus        28 ~GdtVlV~GaGG-~G~~~~~~~~~~g~~~Vi~~~~-~~~k---~~~a~~~G-a--~~~i~~~~~~~~~~~~~~~~~~~G~   99 (176)
T d2jhfa2          28 QGSTCAVFGLGG-VGLSVIMGCKAAGAARIIGVDI-NKDK---FAKAKEVG-A--TECVNPQDYKKPIQEVLTEMSNGGV   99 (176)
T ss_dssp             TTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECS-CGGG---HHHHHHTT-C--SEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred             CCCEEEEECCCC-cHHHHHHHHHHcCCceEEeecC-cHHH---HHHHHHhC-C--eeEEecCCchhHHHHHHHHHhcCCC
Confidence            457899999855 8999999999998 57888877 6544   33333321 1  11111222222 12222222  268


Q ss_pred             CEEEEeccC
Q 019415           81 DFVFHVATP   89 (341)
Q Consensus        81 d~Vi~~a~~   89 (341)
                      |+||.+.+.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999775

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.91  E-value=0.0055  Score=43.16  Aligned_cols=33  Identities=21%  Similarity=0.169  Sum_probs=30.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .+++++|+| .|++|-.++..|.+.|.+|+++.|
T Consensus        20 ~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~   52 (115)
T d1lvla2          20 LPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEA   52 (115)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHhhcccceEEEee
Confidence            357999998 899999999999999999999988

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.90  E-value=0.0053  Score=43.78  Aligned_cols=33  Identities=24%  Similarity=0.150  Sum_probs=30.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .+++++|+| .|+||.+++..|.+.|.+|+++.|
T Consensus        19 ~P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~   51 (122)
T d1h6va2          19 CPGKTLVVG-ASYVALECAGFLAGIGLDVTVMVR   51 (122)
T ss_dssp             CCCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             CCCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEe
Confidence            457899999 899999999999999999999988

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.90  E-value=0.0052  Score=47.78  Aligned_cols=32  Identities=28%  Similarity=0.203  Sum_probs=27.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      |||.|+| .|++|..++..| +.|++|++++- +.
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Di-n~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDI-LP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECS-CH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEEC-CH
Confidence            7899997 999999999766 56999999876 54

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0064  Score=43.54  Aligned_cols=34  Identities=15%  Similarity=0.186  Sum_probs=31.3

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      +++++|+| .|++|-.++..|.+.|.+|+++.| +.
T Consensus        22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~-~~   55 (125)
T d3grsa2          22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIR-HD   55 (125)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SS
T ss_pred             CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEee-cc
Confidence            57999999 899999999999999999999988 54

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.83  E-value=0.0096  Score=45.29  Aligned_cols=76  Identities=18%  Similarity=0.016  Sum_probs=47.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHhc--CC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAIQ--GC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~   80 (341)
                      ++.+|||+|+ |-||...++.+...|. +|+++++ +..+   .+..+.+-    -.+++...-.+ .+.+.+...  ++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~-~~~r---~~~a~~lG----a~~~i~~~~~~~~~~v~~~t~g~G~   97 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGS-RPIC---VEAAKFYG----ATDILNYKNGHIEDQVMKLTNGKGV   97 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECC-CHHH---HHHHHHHT----CSEEECGGGSCHHHHHHHHTTTSCE
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccc-hhhh---HHHHHhhC----ccccccccchhHHHHHHHHhhccCc
Confidence            4568999985 9999999988888896 7888877 5533   33333321    11233222122 234444443  48


Q ss_pred             CEEEEeccC
Q 019415           81 DFVFHVATP   89 (341)
Q Consensus        81 d~Vi~~a~~   89 (341)
                      |+||.+++.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999885

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.82  E-value=0.012  Score=44.45  Aligned_cols=118  Identities=12%  Similarity=-0.022  Sum_probs=64.8

Q ss_pred             CcEEEEecC-cchHHHHHHHHHHHCC----CeEEEEecCCCCchhhhhHhhhC-----CCCCCceEEEecCCCChHHHHH
Q 019415            6 NFKVCVTGG-EGFVGSWLIKKLLDKG----YIVHTTLRPNLEDKSKVDLLKSL-----PGAETRLIFFEAEIYDPDTFEN   75 (341)
Q Consensus         6 ~~~ilI~Ga-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~~~~~~~~   75 (341)
                      +|||.|+|| +.+.+..++..|....    -++..++. +... .+.+.+...     ........+..  -   .+..+
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di-~e~~-~~~~~~d~~~~~~~~~~~~~~~~~~--~---td~~~   73 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDI-PEGK-EKLEIVGALAKRMVEKAGVPIEIHL--T---LDRRR   73 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECC-GGGH-HHHHHHHHHHHHHHHHTTCCCEEEE--E---SCHHH
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcC-CccH-HHHHHHHHHHHHHHHhcCCCceeee--c---CCchh
Confidence            489999996 3445555555555432    37777776 5432 223222211     01111222222  1   22466


Q ss_pred             HhcCCCEEEEeccCCccccchhHh-------------------HhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           76 AIQGCDFVFHVATPLQHIDGYLYK-------------------NVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        76 ~~~~~d~Vi~~a~~~~~~~~~~~~-------------------~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      .++++|+||..|+.......+-.+                   ....-|+...+.+++.+++...-..+|.+|-
T Consensus        74 al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vtN  147 (169)
T d1s6ya1          74 ALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTN  147 (169)
T ss_dssp             HHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             hcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeCC
Confidence            788999999999976643211110                   1123577778888888888873445554443

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=95.80  E-value=0.0072  Score=43.79  Aligned_cols=35  Identities=14%  Similarity=0.226  Sum_probs=31.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      ..++|+|+| +|++|-+++..|.+.|.+|+++.| ..
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~-~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDT-AA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeee-cc
Confidence            357999999 899999999999999999999988 54

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.72  E-value=0.019  Score=42.26  Aligned_cols=34  Identities=21%  Similarity=0.218  Sum_probs=29.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC--CCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r   38 (341)
                      ++++|.|+|+||.||...+.-+.+.  .++|.+++=
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa   36 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA   36 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe
Confidence            3689999999999999999999886  488888765

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.71  E-value=0.0068  Score=43.17  Aligned_cols=33  Identities=30%  Similarity=0.451  Sum_probs=30.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      ++|+|+| .|++|-.++..|.+.|.+|+++.| +.
T Consensus        33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~-~~   65 (122)
T d1xhca2          33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHR-GA   65 (122)
T ss_dssp             SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECS-SS
T ss_pred             CcEEEEC-CcHHHHHHHHHhhcccceEEEEec-cc
Confidence            6899988 899999999999999999999988 54

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=95.66  E-value=0.011  Score=41.78  Aligned_cols=35  Identities=14%  Similarity=-0.055  Sum_probs=31.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      .+++|+|+| +|++|..++..|.+.|.+|+++.| ..
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~-~~   55 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVR-TE   55 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeec-cc
Confidence            458999998 899999999999999999999988 54

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.57  E-value=0.0088  Score=46.14  Aligned_cols=66  Identities=14%  Similarity=-0.014  Sum_probs=47.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ..++|+|+| .|.||+.+++.|..-|.+|+..++ ....           ... ..  .     ..++++++++.+|+|+
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~-~~~~-----------~~~-~~--~-----~~~~l~ell~~sDii~  101 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDI-ENKL-----------PLG-NA--T-----QVQHLSDLLNMSDVVS  101 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SCCC-----------CCT-TC--E-----ECSCHHHHHHHCSEEE
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccc-cccc-----------hhh-hh--h-----hhhhHHHHHhhcccee
Confidence            457899998 999999999999999999999877 4322           000 11  1     1135778888899888


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      -+.....
T Consensus       102 i~~plt~  108 (188)
T d1sc6a1         102 LHVPENP  108 (188)
T ss_dssp             ECCCSST
T ss_pred             ecccCCc
Confidence            7765544

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=95.57  E-value=0.0064  Score=43.38  Aligned_cols=36  Identities=22%  Similarity=0.122  Sum_probs=32.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      .+++++|+| .|+||-.++..|.+.|.+|+++.| +..
T Consensus        24 ~p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~-~~~   59 (123)
T d1dxla2          24 IPKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEF-ASE   59 (123)
T ss_dssp             CCSEEEESC-CSHHHHHHHHHHHHHTCEEEEECS-SSS
T ss_pred             cCCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEE-ccc
Confidence            357999999 899999999999999999999988 543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.55  E-value=0.04  Score=41.30  Aligned_cols=118  Identities=15%  Similarity=0.192  Sum_probs=64.4

Q ss_pred             CCcEEEEecCcchHHHH-HHHHHHHC-C----CeEEEEecCCCCchhhh-hHhhhC-CCCCCceEEEecCCCChHHHHHH
Q 019415            5 SNFKVCVTGGEGFVGSW-LIKKLLDK-G----YIVHTTLRPNLEDKSKV-DLLKSL-PGAETRLIFFEAEIYDPDTFENA   76 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~-l~~~L~~~-g----~~V~~~~r~~~~~~~~~-~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~   76 (341)
                      +..||.|+|| |.+|.. ++..|+.. .    -+|..++. +.++.+.. ..+... ........+..     ..+..++
T Consensus         2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Di-d~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~ea   74 (167)
T d1u8xx1           2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDN-DKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEA   74 (167)
T ss_dssp             CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECS-CHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHH
T ss_pred             CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcC-ChhHHHHHHHHHHHHHHHhCCCcceEe-----cCChhhc
Confidence            4578999998 445554 44455543 2    37888877 65442211 111111 00011222222     1236778


Q ss_pred             hcCCCEEEEeccCCccccchhHhHhhhh--------------------hhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           77 IQGCDFVFHVATPLQHIDGYLYKNVVEA--------------------CVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        77 ~~~~d~Vi~~a~~~~~~~~~~~~~~~~~--------------------nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      ++++|+||..|+.......+. ++.+..                    |+...+.+++..++...-..+|.+|-
T Consensus        75 l~~AD~Vvitag~~~~~g~~r-d~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~TN  147 (167)
T d1u8xx1          75 FTDVDFVMAHIRVGKYAMRAL-DEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSN  147 (167)
T ss_dssp             HSSCSEEEECCCTTHHHHHHH-HHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             cCCCCEEEECCCcCCCCceeH-HHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            899999999999866543211 122222                    35556677777777763456665554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.52  E-value=0.011  Score=44.99  Aligned_cols=76  Identities=17%  Similarity=0.177  Sum_probs=45.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEE-EecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh-HHHHHHhc-CCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHT-TLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP-DTFENAIQ-GCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~-~~d   81 (341)
                      .+.+|+|+|+ |-||...++.+...|.++++ .++ +.   .+++..+++-    -.+++..+-.+. +.+.++.. ++|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~-~~---~k~~~a~~~G----a~~~i~~~~~~~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDI-VE---SRLELAKQLG----ATHVINSKTQDPVAAIKEITDGGVN   98 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEES-CH---HHHHHHHHHT----CSEEEETTTSCHHHHHHHHTTSCEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeecc-HH---HHHHHHHHcC----CeEEEeCCCcCHHHHHHHHcCCCCc
Confidence            4568999996 99999999988888876554 444 44   3444444431    123333222221 22333322 589


Q ss_pred             EEEEeccC
Q 019415           82 FVFHVATP   89 (341)
Q Consensus        82 ~Vi~~a~~   89 (341)
                      +||.+.+.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999774

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.52  E-value=0.0059  Score=47.07  Aligned_cols=36  Identities=19%  Similarity=0.166  Sum_probs=32.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      -+||.|+|| |.+|+.++..++..|++|+++++ +...
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~-~~~~   39 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDI-NEHG   39 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECS-SHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEEC-CHHH
Confidence            468999995 99999999999999999999988 7644

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.49  E-value=0.018  Score=44.69  Aligned_cols=65  Identities=18%  Similarity=0.131  Sum_probs=47.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+| .|-||+.+++.|..-|.+|++.++ ....           .......        ..++.++++.+|+|+
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~-~~~~-----------~~~~~~~--------~~~l~~l~~~~D~v~  102 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDP-YPMK-----------GDHPDFD--------YVSLEDLFKQSDVID  102 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SCCS-----------SCCTTCE--------ECCHHHHHHHCSEEE
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCC-ccch-----------hhhcchh--------HHHHHHHHHhcccce
Confidence            357899999 999999999999999999999877 5432           1111111        224777888899888


Q ss_pred             EeccCC
Q 019415           85 HVATPL   90 (341)
Q Consensus        85 ~~a~~~   90 (341)
                      .+....
T Consensus       103 ~~~plt  108 (199)
T d1dxya1         103 LHVPGI  108 (199)
T ss_dssp             ECCCCC
T ss_pred             eeeccc
Confidence            765543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.47  E-value=0.07  Score=40.13  Aligned_cols=79  Identities=14%  Similarity=0.162  Sum_probs=48.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecC-----------CCChHHH
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAE-----------IYDPDTF   73 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----------l~~~~~~   73 (341)
                      ++||.|-| -|-||+.+++.|.++. .+|..+..+++.  .....+...     +...+..+           +.....+
T Consensus         2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~--~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (172)
T d2czca2           2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPD--FEAYRAKEL-----GIPVYAASEEFIPRFEKEGFEVAGTL   73 (172)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCS--HHHHHHHHT-----TCCEEESSGGGHHHHHHHTCCCSCBH
T ss_pred             cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCCh--HHHHHhhhc-----CceeecccccceeeecccCccccchh
Confidence            47999999 7999999999998875 577766551322  222222211     11112211           1112345


Q ss_pred             HHHhcCCCEEEEeccCCcc
Q 019415           74 ENAIQGCDFVFHVATPLQH   92 (341)
Q Consensus        74 ~~~~~~~d~Vi~~a~~~~~   92 (341)
                      ..+++++|+||-|.|....
T Consensus        74 ~~~~~~vDvViEcTG~f~~   92 (172)
T d2czca2          74 NDLLEKVDIIVDATPGGIG   92 (172)
T ss_dssp             HHHHTTCSEEEECCSTTHH
T ss_pred             hhhhccCCEEEECCCCCCC
Confidence            5566789999999887553

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=95.42  E-value=0.011  Score=42.32  Aligned_cols=33  Identities=15%  Similarity=0.084  Sum_probs=30.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .+++++|+| .|+||..++..|.+.|.+|+++.|
T Consensus        25 ~p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~   57 (125)
T d1ojta2          25 VPGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEM   57 (125)
T ss_dssp             CCSEEEEES-CSHHHHHHHHHHHHHTCEEEEECS
T ss_pred             cCCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEe
Confidence            367999999 899999999999999999999987

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.34  E-value=0.0058  Score=47.39  Aligned_cols=68  Identities=18%  Similarity=0.078  Sum_probs=47.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+| .|-||+.+++.|..-|.+|.+.++ .... ......               ++....+++++++.+|+|+
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~-~~~~-~~~~~~---------------~~~~~~~l~~ll~~sD~i~  109 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDP-YLSD-GVERAL---------------GLQRVSTLQDLLFHSDCVT  109 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECT-TSCT-THHHHH---------------TCEECSSHHHHHHHCSEEE
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccC-cccc-cchhhh---------------ccccccchhhccccCCEEE
Confidence            467999998 999999999999999999999877 5433 111100               0111235677788888877


Q ss_pred             EeccCC
Q 019415           85 HVATPL   90 (341)
Q Consensus        85 ~~a~~~   90 (341)
                      .+....
T Consensus       110 ~~~plt  115 (193)
T d1mx3a1         110 LHCGLN  115 (193)
T ss_dssp             ECCCCC
T ss_pred             Eeeccc
Confidence            666543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.29  E-value=0.03  Score=42.27  Aligned_cols=76  Identities=13%  Similarity=0.038  Sum_probs=43.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEec-CC-CChHHHHHHh--cC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEA-EI-YDPDTFENAI--QG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl-~~~~~~~~~~--~~   79 (341)
                      .+.+|||.|++ -+|...++.+...|. .|++.++ +..+.+..+.+..       .+++.. +- .+.....+..  .+
T Consensus        28 ~G~tVlI~GaG-GvG~~aiq~ak~~G~~~vi~~~~-~~~k~~~ak~lGa-------~~~i~~~~~~~~~~~~~~~~~~~g   98 (176)
T d2fzwa2          28 PGSVCAVFGLG-GVGLAVIMGCKVAGASRIIGVDI-NKDKFARAKEFGA-------TECINPQDFSKPIQEVLIEMTDGG   98 (176)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHHTCSEEEEECS-CGGGHHHHHHHTC-------SEEECGGGCSSCHHHHHHHHTTSC
T ss_pred             CCCEEEEecch-hHHHHHHHHHHHHhcCceEEEcc-cHHHHHHHHHhCC-------cEEEeCCchhhHHHHHHHHHcCCC
Confidence            45689999975 589999999998985 5666655 5544333333321       112221 11 1112222222  36


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      .|+||.+.+.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2fzwa2          99 VDYSFECIGN  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEeeecCCC
Confidence            8999999774

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.25  E-value=0.031  Score=42.78  Aligned_cols=73  Identities=18%  Similarity=0.055  Sum_probs=43.6

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEE-EecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh---HHHHHHh-cCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHT-TLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP---DTFENAI-QGCD   81 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~-~~~d   81 (341)
                      ..|||+||+|-+|+..++.....|.++++ .++ +.+  .+......+.    ...++  |..++   +.+.++. +++|
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~-~~e--~~~~l~~~~g----ad~vi--~~~~~~~~~~~~~~~~~GvD  102 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG-TQE--KCLFLTSELG----FDAAV--NYKTGNVAEQLREACPGGVD  102 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEES-SHH--HHHHHHHHSC----CSEEE--ETTSSCHHHHHHHHCTTCEE
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccc-hHH--HHhhhhhccc----ceEEe--eccchhHHHHHHHHhccCce
Confidence            57999999999999999988888976444 444 321  2222222221    11222  33332   2333332 2699


Q ss_pred             EEEEecc
Q 019415           82 FVFHVAT   88 (341)
Q Consensus        82 ~Vi~~a~   88 (341)
                      +||.+.|
T Consensus       103 vv~D~vG  109 (187)
T d1vj1a2         103 VYFDNVG  109 (187)
T ss_dssp             EEEESSC
T ss_pred             EEEecCC
Confidence            9999976

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.22  E-value=0.0076  Score=46.53  Aligned_cols=68  Identities=21%  Similarity=0.150  Sum_probs=46.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|.|+| .|.||+.+++.|..-|.+|...+| ............               +....++.++++.+|+|+
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~-~~~~~~~~~~~~---------------~~~~~~l~~~l~~sD~v~  105 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDR-HRLPESVEKELN---------------LTWHATREDMYPVCDVVT  105 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECS-SCCCHHHHHHHT---------------CEECSSHHHHGGGCSEEE
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEee-cccccccccccc---------------ccccCCHHHHHHhccchh
Confidence            467999999 999999999999999999999988 543311111110               112244667788888876


Q ss_pred             EeccC
Q 019415           85 HVATP   89 (341)
Q Consensus        85 ~~a~~   89 (341)
                      -+...
T Consensus       106 ~~~pl  110 (188)
T d2naca1         106 LNCPL  110 (188)
T ss_dssp             ECSCC
T ss_pred             hcccc
Confidence            65543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.014  Score=43.52  Aligned_cols=69  Identities=19%  Similarity=0.116  Sum_probs=49.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+|+++|+| .|.||+.+++.|...|-+|++..+ ++     ...++..   ..+....        .+++++...|+||
T Consensus        23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~-dp-----~~al~A~---~dG~~v~--------~~~~a~~~adivv   84 (163)
T d1li4a1          23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEI-DP-----INALQAA---MEGYEVT--------TMDEACQEGNIFV   84 (163)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CH-----HHHHHHH---HTTCEEC--------CHHHHTTTCSEEE
T ss_pred             cCCEEEEec-cccccHHHHHHHHhCCCeeEeeec-cc-----chhHHhh---cCceEee--------ehhhhhhhccEEE
Confidence            468999999 999999999999999999999877 43     2233321   1122222        3677888899998


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      -+.+-..
T Consensus        85 taTGn~~   91 (163)
T d1li4a1          85 TTTGCID   91 (163)
T ss_dssp             ECSSCSC
T ss_pred             ecCCCcc
Confidence            8877433

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.19  E-value=0.072  Score=40.22  Aligned_cols=78  Identities=15%  Similarity=0.068  Sum_probs=50.0

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC-hHHHHHHh--cC
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD-PDTFENAI--QG   79 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~~   79 (341)
                      +.+..|+|+| .|-+|...++.+...| .+|+++++ +.++.+....+..      ...+-.-|-.+ .+.+.+..  .+
T Consensus        28 ~~g~tVlI~G-~GgvGl~ai~~ak~~G~~~Vi~vd~-~~~kl~~Ak~~GA------~~~in~~~~~~~~~~~~~~~~g~G   99 (176)
T d1d1ta2          28 KPGSTCVVFG-LGGVGLSVIMGCKSAGASRIIGIDL-NKDKFEKAMAVGA------TECISPKDSTKPISEVLSEMTGNN   99 (176)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS-CGGGHHHHHHHTC------SEEECGGGCSSCHHHHHHHHHTSC
T ss_pred             CCCCEEEEEC-CCchhHHHHHHHHHcCCceEEEecC-cHHHHHHHHhcCC------cEEECccccchHHHHHHHHhcccc
Confidence            3456899998 4999999999999999 58999888 7655444443322      11121122222 23333333  36


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      .|+||.+.+.
T Consensus       100 ~d~vi~~~g~  109 (176)
T d1d1ta2         100 VGYTFEVIGH  109 (176)
T ss_dssp             CCEEEECSCC
T ss_pred             ceEEEEeCCc
Confidence            9999999774

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.16  E-value=0.04  Score=41.38  Aligned_cols=81  Identities=20%  Similarity=0.094  Sum_probs=52.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCC--CChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI--YDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~~~~~~~~~d~   82 (341)
                      .+++|+|+|-+.-+|+.|+..|+++|..|+...+ +...  .........-    .+....|+  ...+.+++.....|+
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~-~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~lk~~~~~aDI  100 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDV-NNIQ--KFTRGESLKL----NKHHVEDLGEYSEDLLKKCSLDSDV  100 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECS-SEEE--EEESCCCSSC----CCCEEEEEEECCHHHHHHHHHHCSE
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEecc-cccc--ccccccceee----eeeccccccccchhHHhhccccCCE
Confidence            5789999999999999999999999999987654 2111  0000000000    00111111  235668888888999


Q ss_pred             EEEeccCCcc
Q 019415           83 VFHVATPLQH   92 (341)
Q Consensus        83 Vi~~a~~~~~   92 (341)
                      ||..+|....
T Consensus       101 vIsavG~p~~  110 (171)
T d1edza1         101 VITGVPSENY  110 (171)
T ss_dssp             EEECCCCTTC
T ss_pred             EEEccCCCcc
Confidence            9999887664

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.15  E-value=0.014  Score=44.18  Aligned_cols=32  Identities=19%  Similarity=0.279  Sum_probs=26.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLR   38 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r   38 (341)
                      ++||.|.| .|++|+.+++.|.+. +.+++++..
T Consensus         3 kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~   35 (170)
T d1f06a1           3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFS   35 (170)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred             cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEe
Confidence            47999999 799999999999886 577776544

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.15  E-value=0.057  Score=41.57  Aligned_cols=76  Identities=16%  Similarity=0.069  Sum_probs=48.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCCh---HHHHHHhc--
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDP---DTFENAIQ--   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~--   78 (341)
                      .+.+|||+|+ |-+|...+..+...|. +|+++++ +.   .+++..+.+     +...+. |..+.   +.+.++..  
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~-~~---~rl~~a~~~-----Ga~~~~-~~~~~~~~~~i~~~t~g~   93 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDL-NP---ARLAHAKAQ-----GFEIAD-LSLDTPLHEQIAALLGEP   93 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEES-CH---HHHHHHHHT-----TCEEEE-TTSSSCHHHHHHHHHSSS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecc-cc---hhhHhhhhc-----cccEEE-eCCCcCHHHHHHHHhCCC
Confidence            4579999985 9999888888877775 6777766 54   444544443     222222 22222   33444443  


Q ss_pred             CCCEEEEeccCCc
Q 019415           79 GCDFVFHVATPLQ   91 (341)
Q Consensus        79 ~~d~Vi~~a~~~~   91 (341)
                      +.|++|.+.|...
T Consensus        94 g~D~vid~vG~~~  106 (195)
T d1kola2          94 EVDCAVDAVGFEA  106 (195)
T ss_dssp             CEEEEEECCCTTC
T ss_pred             CcEEEEECccccc
Confidence            5899999988443

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.12  E-value=0.026  Score=42.21  Aligned_cols=74  Identities=19%  Similarity=0.134  Sum_probs=46.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC-C-hHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY-D-PDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~-~~~~~~~~~~~d~   82 (341)
                      .+.+|||.|+ |-||...++.+...|.+|+++++ +.+   +.+..+.+     +...+..... + .+.+.....+.+.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~-~~~---r~~~~k~~-----Ga~~~~~~~~~~~~~~~~~~~~~~~~   96 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDI-GDE---KLELAKEL-----GADLVVNPLKEDAAKFMKEKVGGVHA   96 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECS-CHH---HHHHHHHT-----TCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCC-CHH---Hhhhhhhc-----CcceecccccchhhhhcccccCCCce
Confidence            4568999875 88999999999999999999887 554   34444443     2222222221 2 2345555556677


Q ss_pred             EEEecc
Q 019415           83 VFHVAT   88 (341)
Q Consensus        83 Vi~~a~   88 (341)
                      +|.+++
T Consensus        97 ~v~~~~  102 (168)
T d1rjwa2          97 AVVTAV  102 (168)
T ss_dssp             EEESSC
T ss_pred             EEeecC
Confidence            766654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.07  E-value=0.015  Score=45.24  Aligned_cols=69  Identities=20%  Similarity=0.180  Sum_probs=46.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc-CCCEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ-GCDFV   83 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-~~d~V   83 (341)
                      .+++|+|-| -|.+|+++++.|.+.|.+|++.+. +.   .........     +...+     +.   .+++. +||++
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~-d~---~~~~~~~~~-----g~~~~-----~~---~~~~~~~~DI~   87 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADT-DT---ERVAHAVAL-----GHTAV-----AL---EDVLSTPCDVF   87 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CH---HHHHHHHHT-----TCEEC-----CG---GGGGGCCCSEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecc-hH---HHHHHHHhh-----ccccc-----Cc---cccccccceee
Confidence            568999998 999999999999999999998765 43   233333322     22222     12   22443 79999


Q ss_pred             EEeccCCc
Q 019415           84 FHVATPLQ   91 (341)
Q Consensus        84 i~~a~~~~   91 (341)
                      +-||....
T Consensus        88 iPcA~~~~   95 (201)
T d1c1da1          88 APCAMGGV   95 (201)
T ss_dssp             EECSCSCC
T ss_pred             eccccccc
Confidence            99876433

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.06  E-value=0.038  Score=40.05  Aligned_cols=86  Identities=16%  Similarity=0.172  Sum_probs=55.1

Q ss_pred             CcEEEEecCc---chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            6 NFKVCVTGGE---GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         6 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      .++|.|+||+   +..|..+++.|.+.||+|+.+.. +...      +       .+...       ..++.++-..+|.
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP-~~~~------i-------~G~~~-------~~sl~dlp~~iD~   77 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNP-KYEE------V-------LGRKC-------YPSVLDIPDKIEV   77 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECT-TCSE------E-------TTEEC-------BSSGGGCSSCCSE
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECC-cccc------c-------CCCcc-------cccccccCccceE
Confidence            4789999998   89999999999999999888733 2211      0       01111       1123333346788


Q ss_pred             EEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecc
Q 019415           83 VFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTAS  130 (341)
Q Consensus        83 Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss  130 (341)
                      |+-+...                 .....+++.|.+.| ++.+++.++
T Consensus        78 v~i~vp~-----------------~~~~~~~~e~~~~g-~k~v~~~~G  107 (139)
T d2d59a1          78 VDLFVKP-----------------KLTMEYVEQAIKKG-AKVVWFQYN  107 (139)
T ss_dssp             EEECSCH-----------------HHHHHHHHHHHHHT-CSEEEECTT
T ss_pred             EEEEeCH-----------------HHHHHHHHHHHHhC-CCEEEEecc
Confidence            7666331                 22456778888888 776665444

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.04  E-value=0.019  Score=43.74  Aligned_cols=36  Identities=19%  Similarity=0.138  Sum_probs=32.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      ++++|+|+| +|..|-..+..|.++||+|+++.+ ...
T Consensus        42 ~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~-~~~   77 (179)
T d1ps9a3          42 QKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDA-HSE   77 (179)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEES-SSS
T ss_pred             CCcEEEEEC-ccHHHHHHHHHHHhhccceEEEec-cCc
Confidence            568999999 899999999999999999999988 543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.03  E-value=0.014  Score=48.94  Aligned_cols=34  Identities=29%  Similarity=0.447  Sum_probs=31.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      +|||+|+| +|+-|...|..|++.|++|+++-+ +.
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk-~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQ-RD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEES-SS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEEC-CC
Confidence            58999999 899999999999999999999977 54

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.94  E-value=0.047  Score=41.25  Aligned_cols=76  Identities=20%  Similarity=0.115  Sum_probs=46.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC--hHHHHHHh--cC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD--PDTFENAI--QG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~--~~   79 (341)
                      .+.+|+|+| .|-||...++.+...|. .|++.++ +..+   .+..+.+-    -.+++...-.+  .....+..  .+
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~-~~~r---~~~a~~~G----a~~~i~~~~~~~~~~~~~~~~~~~G   98 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDI-NGEK---FPKAKALG----ATDCLNPRELDKPVQDVITELTAGG   98 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECS-CGGG---HHHHHHTT----CSEEECGGGCSSCHHHHHHHHHTSC
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeecc-chHH---HHHHHHhC----CCcccCCccchhhhhhhHhhhhcCC
Confidence            457899998 59999999999999997 5666666 5544   33333331    11222221111  22223222  36


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      +|+||.++|.
T Consensus        99 ~d~vie~~G~  108 (174)
T d1e3ia2          99 VDYSLDCAGT  108 (174)
T ss_dssp             BSEEEESSCC
T ss_pred             CcEEEEeccc
Confidence            9999999874

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.097  Score=36.89  Aligned_cols=78  Identities=18%  Similarity=0.150  Sum_probs=51.8

Q ss_pred             CCCC-CCcEEEEecC----------cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC
Q 019415            1 MDHK-SNFKVCVTGG----------EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD   69 (341)
Q Consensus         1 M~~~-~~~~ilI~Ga----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~   69 (341)
                      |... ..+||||+|+          --+.+.+.++.|.+.|++++.+.- |+..-      ...+...++   +..+-..
T Consensus         1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~-NP~TV------std~d~aD~---lYfePlt   70 (127)
T d1a9xa3           1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNS-NPATI------MTDPEMADA---TYIEPIH   70 (127)
T ss_dssp             CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECS-CTTCG------GGCGGGSSE---EECSCCC
T ss_pred             CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecC-chHhh------hcChhhcce---eeeecCC
Confidence            5543 3589999998          457899999999999999999866 66541      111111112   3333445


Q ss_pred             hHHHHHHhc--CCCEEEEecc
Q 019415           70 PDTFENAIQ--GCDFVFHVAT   88 (341)
Q Consensus        70 ~~~~~~~~~--~~d~Vi~~a~   88 (341)
                      .+.+.+.++  ++|.|+-..|
T Consensus        71 ~e~v~~Ii~~E~pd~il~~~G   91 (127)
T d1a9xa3          71 WEVVRKIIEKERPDAVLPTMG   91 (127)
T ss_dssp             HHHHHHHHHHHCCSEEECSSS
T ss_pred             HHHHHHHHHHhCcCCeEEEee
Confidence            677888875  7998875543

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=94.88  E-value=0.062  Score=43.91  Aligned_cols=33  Identities=21%  Similarity=0.134  Sum_probs=29.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ++++|+|-| -|.+|+++++.|.+.|.+|++++.
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            467999999 899999999999999999988764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.82  E-value=0.033  Score=42.86  Aligned_cols=68  Identities=15%  Similarity=0.069  Sum_probs=46.6

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+++|.|+| .|.||+.+++.|..-|.+|.+.++ ........... .              ....+++.++++.+|+|+
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~-~~~~~~~~~~~-~--------------~~~~~~l~~ll~~sD~v~  108 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDT-HRASSSDEASY-Q--------------ATFHDSLDSLLSVSQFFS  108 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECS-SCCCHHHHHHH-T--------------CEECSSHHHHHHHCSEEE
T ss_pred             cccceEEee-cccchHHHHHHHHhhccccccccc-cccccchhhcc-c--------------ccccCCHHHHHhhCCeEE
Confidence            357899999 999999999999999999999877 54331111111 0              011234777888889887


Q ss_pred             EeccC
Q 019415           85 HVATP   89 (341)
Q Consensus        85 ~~a~~   89 (341)
                      -+...
T Consensus       109 l~~pl  113 (191)
T d1gdha1         109 LNAPS  113 (191)
T ss_dssp             ECCCC
T ss_pred             ecCCC
Confidence            66544

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=94.79  E-value=0.017  Score=42.54  Aligned_cols=33  Identities=12%  Similarity=0.210  Sum_probs=28.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC--CCeEEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLR   38 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r   38 (341)
                      |++|.|+|+||.||...+.-+.+.  .++|.+++=
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            468999999999999999998886  378888765

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.76  E-value=0.034  Score=42.49  Aligned_cols=68  Identities=15%  Similarity=0.130  Sum_probs=46.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .++++.|+| .|.||+.+++.|..-|.+|.+.+| ...... ....        .++        ..+++++++.+|+|+
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~-~~~~~~-~~~~--------~~~--------~~~l~ell~~sDiv~  103 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDP-YVSPAR-AAQL--------GIE--------LLSLDDLLARADFIS  103 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECT-TSCHHH-HHHH--------TCE--------ECCHHHHHHHCSEEE
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecC-CCChhH-Hhhc--------Cce--------eccHHHHHhhCCEEE
Confidence            357888888 899999999999999999999877 554311 1110        111        124677888889887


Q ss_pred             EeccCCc
Q 019415           85 HVATPLQ   91 (341)
Q Consensus        85 ~~a~~~~   91 (341)
                      -+.....
T Consensus       104 ~~~Plt~  110 (184)
T d1ygya1         104 VHLPKTP  110 (184)
T ss_dssp             ECCCCST
T ss_pred             EcCCCCc
Confidence            6655433

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.63  E-value=0.032  Score=41.38  Aligned_cols=73  Identities=21%  Similarity=0.254  Sum_probs=41.0

Q ss_pred             CCCCCCcEEEEecCcchHHHHH-HHHHHHCC-CeEEEE-ecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh
Q 019415            1 MDHKSNFKVCVTGGEGFVGSWL-IKKLLDKG-YIVHTT-LRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI   77 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG~~l-~~~L~~~g-~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (341)
                      |+.  ++||.|+| +|.+|+.+ .+.|.+.. .++.++ +| +... ......+..     ++.+...   ..+++.+..
T Consensus         1 M~k--kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~-~~~~-~~~~~a~~~-----~i~~~~~---~~d~l~~~~   67 (157)
T d1nvmb1           1 MNQ--KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGI-DAAS-DGLARAQRM-----GVTTTYA---GVEGLIKLP   67 (157)
T ss_dssp             CCS--CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECS-CTTC-HHHHHHHHT-----TCCEESS---HHHHHHHSG
T ss_pred             CCC--CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEec-chhc-cchhhhhhc-----CCccccc---ceeeeeecc
Confidence            664  48999999 99999865 45554443 466665 56 5543 222222221     2333322   234444433


Q ss_pred             --cCCCEEEEe
Q 019415           78 --QGCDFVFHV   86 (341)
Q Consensus        78 --~~~d~Vi~~   86 (341)
                        .++|+||.+
T Consensus        68 ~~~~iDiVf~A   78 (157)
T d1nvmb1          68 EFADIDFVFDA   78 (157)
T ss_dssp             GGGGEEEEEEC
T ss_pred             cccccCEEEEc
Confidence              468999876

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.63  E-value=0.019  Score=44.18  Aligned_cols=78  Identities=14%  Similarity=0.116  Sum_probs=47.9

Q ss_pred             CcEEEE-ecCcchHHHHHHHHHHHCCCeEEEEecCCCCch-hhhhHhhhCCCCCCceEEEec---CCCCh-HHHHHHh--
Q 019415            6 NFKVCV-TGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDK-SKVDLLKSLPGAETRLIFFEA---EIYDP-DTFENAI--   77 (341)
Q Consensus         6 ~~~ilI-~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~---Dl~~~-~~~~~~~--   77 (341)
                      +.+|+| .||+|-+|...++.....|.+|++++| +.... ++.+.+..+.    --+++.-   |..+. +.+.+..  
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~-~~~~~~~~~~~~~~lG----ad~vi~~~~~~~~~~~~~v~~~~~~  103 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIR-DRPNLDEVVASLKELG----ATQVITEDQNNSREFGPTIKEWIKQ  103 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEEC-CCTTHHHHHHHHHHHT----CSEEEEHHHHHCGGGHHHHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEe-cccccchHHhhhhhcc----ccEEEeccccchhHHHHHHHHHHhh
Confidence            356777 589999999999988888999999998 65442 3344444431    1122222   22221 1223322  


Q ss_pred             --cCCCEEEEecc
Q 019415           78 --QGCDFVFHVAT   88 (341)
Q Consensus        78 --~~~d~Vi~~a~   88 (341)
                        .++|+|+++.+
T Consensus       104 ~g~~vdvv~D~vg  116 (189)
T d1gu7a2         104 SGGEAKLALNCVG  116 (189)
T ss_dssp             HTCCEEEEEESSC
T ss_pred             ccCCceEEEECCC
Confidence              35899999865

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.61  E-value=0.15  Score=35.45  Aligned_cols=72  Identities=18%  Similarity=0.103  Sum_probs=47.6

Q ss_pred             CCcEEEEecCc----------chHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHH
Q 019415            5 SNFKVCVTGGE----------GFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFE   74 (341)
Q Consensus         5 ~~~~ilI~Gat----------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~   74 (341)
                      ..++|||+|+.          -+.+.+.++.|.+.|++++.+.- |+..      ....+...+++   ..+-...+.+.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~-NPeT------Vstd~d~aD~l---Yfeplt~e~v~   72 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC-NPET------VSTDYDTSDRL---YFEPVTLEDVL   72 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECC-CTTS------STTSTTSSSEE---ECCCCSHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEec-Chhh------hhcChhhcCce---EEccCCHHHHH
Confidence            35799999973          38899999999999999999866 6654      11111111222   23333566777


Q ss_pred             HHhc--CCCEEEEe
Q 019415           75 NAIQ--GCDFVFHV   86 (341)
Q Consensus        75 ~~~~--~~d~Vi~~   86 (341)
                      +.++  ++|.|+--
T Consensus        73 ~Ii~~E~p~~ii~~   86 (121)
T d1a9xa4          73 EIVRIEKPKGVIVQ   86 (121)
T ss_dssp             HHHHHHCCSEEECS
T ss_pred             HHHHHhCCCEEEee
Confidence            7764  78877544

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.59  E-value=0.11  Score=36.24  Aligned_cols=31  Identities=29%  Similarity=0.464  Sum_probs=28.0

Q ss_pred             cEEEEecCc---chHHHHHHHHHHHCCCeEEEEe
Q 019415            7 FKVCVTGGE---GFVGSWLIKKLLDKGYIVHTTL   37 (341)
Q Consensus         7 ~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~   37 (341)
                      |+|.|+|++   +..|..+++.|++.||+|+.+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVn   35 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVN   35 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEc
Confidence            689999987   8899999999999999988874

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.41  E-value=0.022  Score=44.37  Aligned_cols=77  Identities=19%  Similarity=0.245  Sum_probs=46.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchh------hhhHhhhCCCCCCceEEEe-cCCCChHHHHHHhc-
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKS------KVDLLKSLPGAETRLIFFE-AEIYDPDTFENAIQ-   78 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~-   78 (341)
                      |||+++| ++-.|..+++.|.+.|++|.++.- .+++..      .+..+...    .++.++. .++.+++.++.+-+ 
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt-~~~~~~~~~~~~~~~~~a~~----~~i~~~~~~~~~~~~~~~~i~~~   74 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFT-HTDNPGEKAFYGSVARLAAE----RGIPVYAPDNVNHPLWVERIAQL   74 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEEC-CCC------CCCCHHHHHHH----HTCCEECCSCCCSHHHHHHHHHT
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEc-CCCCCCcccccCHHHHHHHH----cCCcceecccccchhhhhhhhhh
Confidence            7899997 566899999999999999977653 222110      01111111    2455554 45555554443332 


Q ss_pred             CCCEEEEeccC
Q 019415           79 GCDFVFHVATP   89 (341)
Q Consensus        79 ~~d~Vi~~a~~   89 (341)
                      ++|++|-+...
T Consensus        75 ~~Dlii~~g~~   85 (203)
T d2blna2          75 SPDVIFSFYYR   85 (203)
T ss_dssp             CCSEEEEESCC
T ss_pred             cccceeeeecc
Confidence            78999888654

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.40  E-value=0.25  Score=36.87  Aligned_cols=84  Identities=19%  Similarity=0.167  Sum_probs=46.9

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCC----CCce-EEEecCCCChHHHHHHhcC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGA----ETRL-IFFEAEIYDPDTFENAIQG   79 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~-~~~~~Dl~~~~~~~~~~~~   79 (341)
                      |++|.|-| -|-||+.+++.|.+++ .+|..+.. ..+.......+......    .... .+-...+.-...+..++++
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~   78 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK-TRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDE   78 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE-SSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHT
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec-CCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcC
Confidence            46899998 8999999999998886 56766654 32221211112111000    0000 0000011112345566778


Q ss_pred             CCEEEEeccCCc
Q 019415           80 CDFVFHVATPLQ   91 (341)
Q Consensus        80 ~d~Vi~~a~~~~   91 (341)
                      +|+||-|.|...
T Consensus        79 vDvViEcTG~f~   90 (171)
T d1cf2o1          79 ADIVIDCTPEGI   90 (171)
T ss_dssp             CSEEEECCSTTH
T ss_pred             CCEEEEccCCCC
Confidence            999999988654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=94.37  E-value=0.098  Score=39.17  Aligned_cols=76  Identities=14%  Similarity=0.063  Sum_probs=47.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d   81 (341)
                      .+.+|||.|+ |-+|...++.+...|. .|+++++ +.   .+.+..+.+-    ..+++..+-.+.+...+...  ++|
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~-~~---~k~~~~~~~g----a~~~i~~~~~~~~~~~~~~~~~g~d  102 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDV-KE---EKLKLAERLG----ADHVVDARRDPVKQVMELTRGRGVN  102 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEES-SH---HHHHHHHHTT----CSEEEETTSCHHHHHHHHTTTCCEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccc-hh---HHHHHHhhcc----cceeecCcccHHHHHHHhhCCCCce
Confidence            3568999885 9999999998888885 5666666 44   4455555431    22344333222333333332  589


Q ss_pred             EEEEeccC
Q 019415           82 FVFHVATP   89 (341)
Q Consensus        82 ~Vi~~a~~   89 (341)
                      +||.+++.
T Consensus       103 ~vid~~g~  110 (172)
T d1h2ba2         103 VAMDFVGS  110 (172)
T ss_dssp             EEEESSCC
T ss_pred             EEEEecCc
Confidence            99999874

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.29  E-value=0.028  Score=45.14  Aligned_cols=34  Identities=24%  Similarity=0.175  Sum_probs=31.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      .+||+|+| .|..|..++..|.++|++|+++.| +.
T Consensus         4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er-~~   37 (265)
T d2voua1           4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYER-SP   37 (265)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SS
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeC-CC
Confidence            57999999 899999999999999999999988 54

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.25  E-value=0.024  Score=43.38  Aligned_cols=34  Identities=18%  Similarity=0.139  Sum_probs=30.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~   41 (341)
                      ++||+|+| +|..|-..+..|.+.|+ +|+++.| +.
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~-~~   38 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLGYSDITIFEK-QE   38 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEES-SS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEe-cC
Confidence            57999999 89999999999999998 5999988 54

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=94.23  E-value=0.12  Score=41.19  Aligned_cols=33  Identities=27%  Similarity=0.313  Sum_probs=30.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ++++|+|-| -|.+|+++++.|.+.|.+|++++.
T Consensus        30 ~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          30 EGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            568999998 999999999999999999988765

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.18  E-value=0.024  Score=41.72  Aligned_cols=33  Identities=24%  Similarity=0.344  Sum_probs=30.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ++++|||+|| |.+|..-++.|++.|.+|++++-
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            5689999995 99999999999999999999864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.09  E-value=0.039  Score=43.65  Aligned_cols=73  Identities=23%  Similarity=0.121  Sum_probs=48.5

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      ++++|+|-| -|.+|+++++.|.+.|.+|++.+. +.   ...+.+....    +...+     +++++.  -.+||+++
T Consensus        38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~-~~---~~~~~~~~~~----g~~~~-----~~~~~~--~~~cDIl~  101 (230)
T d1leha1          38 EGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDV-NK---AAVSAAVAEE----GADAV-----APNAIY--GVTCDIFA  101 (230)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-CH---HHHHHHHHHH----CCEEC-----CGGGTT--TCCCSEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecc-cH---HHHHHHHHhc----CCccc-----CCcccc--cccccEec
Confidence            578999999 999999999999999999998766 43   2233332211    11221     222221  12799999


Q ss_pred             EeccCCccc
Q 019415           85 HVATPLQHI   93 (341)
Q Consensus        85 ~~a~~~~~~   93 (341)
                      -||-....+
T Consensus       102 PcA~~~~I~  110 (230)
T d1leha1         102 PCALGAVLN  110 (230)
T ss_dssp             ECSCSCCBS
T ss_pred             ccccccccC
Confidence            999765544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.05  E-value=0.047  Score=40.27  Aligned_cols=35  Identities=20%  Similarity=0.141  Sum_probs=29.2

Q ss_pred             CcEEEEec-CcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            6 NFKVCVTG-GEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~G-atG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      .++++|++ +.||||..++..|.+.|.+|+++.+ ..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~-~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSG-VH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEES-SC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEec-CC
Confidence            45666653 5799999999999999999999988 54

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.00  E-value=0.055  Score=40.82  Aligned_cols=76  Identities=17%  Similarity=0.051  Sum_probs=46.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCC--hHHHHHHh--cC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYD--PDTFENAI--QG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~--~~   79 (341)
                      .+.+|||+|+ |-+|...++.+...|. +|+++++ +.++   ++..+.+-    -.+++...-.|  .+......  .+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~-~~~k---l~~a~~lG----a~~~i~~~~~d~~~~~~~~~~~~~G   97 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGT-HKDK---FPKAIELG----ATECLNPKDYDKPIYEVICEKTNGG   97 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS-CGGG---HHHHHHTT----CSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCC-hHHH---HHHHHHcC----CcEEEcCCCchhHHHHHHHHhcCCC
Confidence            4568999995 8999999999999985 6888777 6544   33333331    11222211112  12232223  26


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      .|+||.+++.
T Consensus        98 ~d~vid~~g~  107 (174)
T d1p0fa2          98 VDYAVECAGR  107 (174)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEEcCCC
Confidence            8999998764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.99  E-value=0.14  Score=40.72  Aligned_cols=107  Identities=16%  Similarity=0.205  Sum_probs=61.4

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCc----------------hhhhhHhhh-CCCCCCceEEEecCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLED----------------KSKVDLLKS-LPGAETRLIFFEAEI   67 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~Dl   67 (341)
                      ..+|+|+| .|-+|++++..|+..|- ++++++. +.-.                ..|.+.+.. +....+.+.+...+.
T Consensus        30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~-D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~~  107 (247)
T d1jw9b_          30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF-DTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  107 (247)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC-CBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC-cccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhhh
Confidence            35899999 67799999999999995 6666653 3211                111111111 111113444444333


Q ss_pred             -CChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           68 -YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        68 -~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                       .+.+.....+...|+||.+...                ...-..+-++|.+.+  ..+|+.+..+
T Consensus       108 ~~~~~~~~~~~~~~divid~~d~----------------~~~~~~in~~~~~~~--ip~i~g~~~~  155 (247)
T d1jw9b_         108 LLDDAELAALIAEHDLVLDCTDN----------------VAVRNQLNAGCFAAK--VPLVSGAAIR  155 (247)
T ss_dssp             CCCHHHHHHHHHTSSEEEECCSS----------------HHHHHHHHHHHHHHT--CCEEEEEEEB
T ss_pred             hhhhccccccccccceeeeccch----------------hhhhhhHHHHHHHhC--CCcccccccc
Confidence             2345666777889999887432                112234556677777  4466655544

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.86  E-value=0.036  Score=46.06  Aligned_cols=33  Identities=21%  Similarity=0.179  Sum_probs=30.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      +.++|+|+| +|..|-..+..|.++|++|+++.+
T Consensus        29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~   61 (370)
T d2iida1          29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEA   61 (370)
T ss_dssp             SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeC
Confidence            467999999 899999999999999999999977

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.82  E-value=0.044  Score=40.89  Aligned_cols=78  Identities=26%  Similarity=0.194  Sum_probs=44.5

Q ss_pred             cEEEEecCcchHHHHHHHH-HHHC-----CCeEEEEecCCCCchhhhhHhhh-CCCCCCceEEEecCCCChHHHHHHhcC
Q 019415            7 FKVCVTGGEGFVGSWLIKK-LLDK-----GYIVHTTLRPNLEDKSKVDLLKS-LPGAETRLIFFEAEIYDPDTFENAIQG   79 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~-L~~~-----g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (341)
                      |||.|+|| |.+|..++-. |+..     ..++..++. +..+......+.. ...  ....+...     .+..+.+++
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Di-d~~k~~~~~d~~~~~~~--~~~~~~~t-----~~~~~~l~~   71 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDI-DEEKQKIVVDFVKRLVK--DRFKVLIS-----DTFEGAVVD   71 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECS-CHHHHHHHHHHHHHHHT--TSSEEEEC-----SSHHHHHTT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEec-CcHHHHHHHHHHHhhhc--cCceEEEe-----cCcccccCC
Confidence            78999997 5466555533 3321     358888888 6654332222211 111  12222221     124567889


Q ss_pred             CCEEEEeccCCccc
Q 019415           80 CDFVFHVATPLQHI   93 (341)
Q Consensus        80 ~d~Vi~~a~~~~~~   93 (341)
                      +|+||..|+.....
T Consensus        72 aDvVVita~~~~~~   85 (162)
T d1up7a1          72 AKYVIFQFRPGGLK   85 (162)
T ss_dssp             CSEEEECCCTTHHH
T ss_pred             CCEEEEecccCCCC
Confidence            99999999976543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.79  E-value=0.026  Score=46.12  Aligned_cols=31  Identities=23%  Similarity=0.255  Sum_probs=29.1

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      |+|+|+| +|.-|-..+..|.++|++|+++-+
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G~~V~vlE~   31 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRGTDAVLLES   31 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTTCCEEEECS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCCCCEEEEec
Confidence            6899999 699999999999999999999977

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=93.73  E-value=0.085  Score=37.37  Aligned_cols=94  Identities=20%  Similarity=0.297  Sum_probs=57.7

Q ss_pred             CcEEEEecCcchHHHHHHHHHHH-CCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcC-CCEE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLD-KGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQG-CDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~V   83 (341)
                      +.+|+|.| +|.+|+.|++.|.. .+|++.++.. +-..  +..  .    .-.++.++.     ++.+.+..++ .+++
T Consensus         3 ~~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiD-dd~~--k~G--~----~I~Gi~V~~-----~~~l~~~~~~~i~ia   67 (126)
T d2dt5a2           3 KWGLCIVG-MGRLGSALADYPGFGESFELRGFFD-VDPE--KVG--R----PVRGGVIEH-----VDLLPQRVPGRIEIA   67 (126)
T ss_dssp             CEEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEE-SCTT--TTT--C----EETTEEEEE-----GGGHHHHSTTTCCEE
T ss_pred             CceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEe-CchH--hcC--C----EECCEEEec-----HHHHHHHHhhcccEE
Confidence            35899999 89999999988754 4789999876 3321  000  0    012555553     3446666543 4443


Q ss_pred             EEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccc
Q 019415           84 FHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVL  132 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~  132 (341)
                      +-+..  .               .....+++.+.+.+ ++.+..++...
T Consensus        68 i~~i~--~---------------~~~~~I~d~l~~~g-Ik~I~~f~~~~   98 (126)
T d2dt5a2          68 LLTVP--R---------------EAAQKAADLLVAAG-IKGILNFAPVV   98 (126)
T ss_dssp             EECSC--H---------------HHHHHHHHHHHHHT-CCEEEECSSSC
T ss_pred             EEeCC--H---------------HHHHHHHHHHHHcC-CCEEeecCcee
Confidence            33321  1               11346778888888 99888776654

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.55  E-value=0.068  Score=39.48  Aligned_cols=70  Identities=16%  Similarity=0.151  Sum_probs=52.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEEE
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFVF   84 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   84 (341)
                      .+|+++|+| =|++|+-+++.|...|-+|+++-. ++     +..++..   .++.+...        ++++++..|+||
T Consensus        22 aGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~-DP-----i~alqA~---mdGf~v~~--------~~~a~~~aDi~v   83 (163)
T d1v8ba1          22 SGKIVVICG-YGDVGKGCASSMKGLGARVYITEI-DP-----ICAIQAV---MEGFNVVT--------LDEIVDKGDFFI   83 (163)
T ss_dssp             TTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECS-CH-----HHHHHHH---TTTCEECC--------HHHHTTTCSEEE
T ss_pred             cCCEEEEec-ccccchhHHHHHHhCCCEEEEEec-Cc-----hhhHHHH---hcCCccCc--------hhHccccCcEEE
Confidence            468999999 999999999999999999999866 33     2333331   23444433        578888999999


Q ss_pred             EeccCCcc
Q 019415           85 HVATPLQH   92 (341)
Q Consensus        85 ~~a~~~~~   92 (341)
                      -+-|-...
T Consensus        84 TaTGn~~v   91 (163)
T d1v8ba1          84 TCTGNVDV   91 (163)
T ss_dssp             ECCSSSSS
T ss_pred             EcCCCCcc
Confidence            98776553

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.36  E-value=0.037  Score=44.84  Aligned_cols=32  Identities=19%  Similarity=0.162  Sum_probs=29.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      -|+|+| +|.+|..++..|+++|++|+++.| +.
T Consensus         6 DvvIIG-aGi~Gls~A~~La~~G~~V~vlE~-~~   37 (276)
T d1ryia1           6 EAVVIG-GGIIGSAIAYYLAKENKNTALFES-GT   37 (276)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCcEEEEeC-CC
Confidence            399999 899999999999999999999988 53

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.30  E-value=0.064  Score=46.66  Aligned_cols=76  Identities=21%  Similarity=0.239  Sum_probs=46.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCch----------------hhh----hHhhhCCCCCCceEEEec
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDK----------------SKV----DLLKSLPGAETRLIFFEA   65 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------------~~~----~~~~~~~~~~~~~~~~~~   65 (341)
                      .||||+|+ |-+|+++++.|+..|. ++++++. +.-..                .+.    +.+..+.. .-.+..+..
T Consensus        38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~-D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np-~v~i~~~~~  114 (426)
T d1yovb1          38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDM-DTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP-NCNVVPHFN  114 (426)
T ss_dssp             CCEEEECS-STTHHHHHHHHHTTTCCCEEEECC-CBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHST-TCCCEEECS
T ss_pred             CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEEC-CCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCC-CCceEeeec
Confidence            58999996 5599999999999995 6777754 33210                111    11222211 124555555


Q ss_pred             CCCChHHHHHHhcCCCEEEEec
Q 019415           66 EIYDPDTFENAIQGCDFVFHVA   87 (341)
Q Consensus        66 Dl~~~~~~~~~~~~~d~Vi~~a   87 (341)
                      ++.+..  ...++++|+||.+.
T Consensus       115 ~i~~~~--~~~~~~~DlVi~~~  134 (426)
T d1yovb1         115 KIQDFN--DTFYRQFHIIVCGL  134 (426)
T ss_dssp             CGGGBC--HHHHTTCSEEEECC
T ss_pred             cccchH--HHHHHhcchheecc
Confidence            554432  35678899998773

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.29  E-value=0.062  Score=42.49  Aligned_cols=35  Identities=31%  Similarity=0.391  Sum_probs=31.8

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      +.++|+|+| +|..|-..+..|.++|++|+++.+ +.
T Consensus        48 ~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~-~~   82 (233)
T d1djqa3          48 NKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDT-AE   82 (233)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECS-SS
T ss_pred             CCceEEEEc-ccHHHHHHHHHHHHhccceeeEee-cc
Confidence            568999999 899999999999999999999977 54

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.27  E-value=0.044  Score=44.77  Aligned_cols=32  Identities=28%  Similarity=0.190  Sum_probs=29.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .|||+|+| +|.-|-..+..|.+.|++|+++.+
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~   32 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEA   32 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeC
Confidence            37899999 899999999999999999999977

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.27  E-value=0.15  Score=39.28  Aligned_cols=30  Identities=23%  Similarity=0.345  Sum_probs=26.8

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEe
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTL   37 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~   37 (341)
                      |||+++| ++..|..+++.|.+.|++|.++.
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~   30 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVF   30 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEE
Confidence            7899998 77899999999999999998765

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.23  E-value=0.052  Score=40.62  Aligned_cols=34  Identities=26%  Similarity=0.081  Sum_probs=29.5

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC--eEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY--IVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~   41 (341)
                      +|||+|+| .|++|-.++..|.+.+.  +|+++.+ +.
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~-~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEP-NT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECS-CS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEEC-CC
Confidence            68999999 89999999999999874  7888776 54

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.11  E-value=0.049  Score=41.07  Aligned_cols=33  Identities=24%  Similarity=0.300  Sum_probs=28.7

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .+++|+|+| +|++|-.++..|.+.|.+|+++.+
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEe
Confidence            357899999 899999999999999988777655

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.97  E-value=0.14  Score=41.82  Aligned_cols=25  Identities=28%  Similarity=0.295  Sum_probs=23.4

Q ss_pred             CcchHHHHHHHHHHHCCCeEEEEec
Q 019415           14 GEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus        14 atG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .||..|.+|++.|..+|++|+.+.+
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEec
Confidence            4699999999999999999999987

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=92.68  E-value=0.19  Score=38.74  Aligned_cols=84  Identities=18%  Similarity=0.217  Sum_probs=50.1

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhh-h-----HhhhCCCCCCceEEEecCCCChHHHHHHhc
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKV-D-----LLKSLPGAETRLIFFEAEIYDPDTFENAIQ   78 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   78 (341)
                      .+|||+++| ++..+..+++.|.+.|++|.++.- .+...... .     ..... ....++.+...+..+.+.+.+.++
T Consensus         2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   78 (206)
T d1fmta2           2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFT-QPDRPAGRGKKLMPSPVKVL-AEEKGLPVFQPVSLRPQENQQLVA   78 (206)
T ss_dssp             CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEEC-CCCBC------CBCCHHHHH-HHHTTCCEECCSCSCSHHHHHHHH
T ss_pred             CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEe-CCCcccccCccccccchhhh-hhccCccccccccccchhhHHHHh
Confidence            368999998 678999999999999999776543 22210100 0     00000 001255566666655555666665


Q ss_pred             --CCCEEEEeccCCc
Q 019415           79 --GCDFVFHVATPLQ   91 (341)
Q Consensus        79 --~~d~Vi~~a~~~~   91 (341)
                        ++|+++-+.+..-
T Consensus        79 ~~~~d~~v~~~~~~i   93 (206)
T d1fmta2          79 ELQADVMVVVAYGLI   93 (206)
T ss_dssp             HTTCSEEEEESCCSC
T ss_pred             hhcceEEEeeccccc
Confidence              5888877766443

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=92.63  E-value=0.74  Score=33.65  Aligned_cols=98  Identities=15%  Similarity=0.291  Sum_probs=55.3

Q ss_pred             CcEEEEecCcchHHHH-HHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCEE
Q 019415            6 NFKVCVTGGEGFVGSW-LIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDFV   83 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~-l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (341)
                      ++||.|+| +|.+|+. .+..|... +.+++++..++.........  ..     ++.     ..  +.++.+++++|+|
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~--~~-----~~~-----~~--~~~~~l~~~~D~V   65 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICE--SW-----RIP-----YA--DSLSSLAASCDAV   65 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHH--HH-----TCC-----BC--SSHHHHHTTCSEE
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhh--cc-----ccc-----cc--ccchhhhhhcccc
Confidence            47999999 6999975 46666655 57877765425544222221  11     111     11  1244456789998


Q ss_pred             EEeccCCccccchhHhHh------------hhhhhhHHHHHHHHHHhcC
Q 019415           84 FHVATPLQHIDGYLYKNV------------VEACVGAAKKIASFCVKSG  120 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~------------~~~nv~~~~~l~~~~~~~~  120 (341)
                      +-+........  -....            +..|..-...|++++++.+
T Consensus        66 ~I~tp~~~h~~--~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~  112 (164)
T d1tlta1          66 FVHSSTASHFD--VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKK  112 (164)
T ss_dssp             EECSCTTHHHH--HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTT
T ss_pred             cccccchhccc--cccccccccceeeccccccCCHHHHHHHHHHHHHcC
Confidence            76544322111  00011            2346777888899998887

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.60  E-value=0.065  Score=41.11  Aligned_cols=33  Identities=21%  Similarity=0.151  Sum_probs=28.4

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNL   41 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~   41 (341)
                      |||+|+| +|++|-+++..|.+.+  .+|+++.| +.
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~-~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEK-GD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEES-SS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeC-CC
Confidence            7999999 7899999999998874  68888877 53

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=92.59  E-value=0.28  Score=36.46  Aligned_cols=76  Identities=14%  Similarity=0.113  Sum_probs=44.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEec-CCCC-hHHHHHHh--cC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEA-EIYD-PDTFENAI--QG   79 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~~-~~~~~~~~--~~   79 (341)
                      .+.+|+|+|+.| +|...+..+...| .+|+++++ +.++   ++....+-    -.+++.. +-.+ .+......  .+
T Consensus        28 ~g~~VlI~G~Gg-~g~~~~~~~~~~g~~~Vi~~~~-~~~r---l~~a~~~G----Ad~~in~~~~~~~~~~~~~~~~~~G   98 (175)
T d1cdoa2          28 PGSTCAVFGLGA-VGLAAVMGCHSAGAKRIIAVDL-NPDK---FEKAKVFG----ATDFVNPNDHSEPISQVLSKMTNGG   98 (175)
T ss_dssp             TTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECS-CGGG---HHHHHHTT----CCEEECGGGCSSCHHHHHHHHHTSC
T ss_pred             CCCEEEEEecCC-ccchHHHHHHHHhhchheeecc-hHHH---HHHHHHcC----CcEEEcCCCcchhHHHHHHhhccCC
Confidence            456899999755 7777777777776 57888877 6544   34343331    1123322 1111 23333333  36


Q ss_pred             CCEEEEeccC
Q 019415           80 CDFVFHVATP   89 (341)
Q Consensus        80 ~d~Vi~~a~~   89 (341)
                      .|+||.+.+.
T Consensus        99 ~d~vid~~G~  108 (175)
T d1cdoa2          99 VDFSLECVGN  108 (175)
T ss_dssp             BSEEEECSCC
T ss_pred             cceeeeecCC
Confidence            9999999874

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.54  E-value=0.11  Score=46.59  Aligned_cols=108  Identities=16%  Similarity=0.140  Sum_probs=61.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCCCchh----------------hh----hHhhhCCCCCCceEEEec
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNLEDKS----------------KV----DLLKSLPGAETRLIFFEA   65 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~----------------~~----~~~~~~~~~~~~~~~~~~   65 (341)
                      .+|+|+|+ |-+|.++++.|+-.| ..+++++. +.-...                +.    +.+..+.+. -.+.++..
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~-d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~-v~i~~~~~  102 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDG-NQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSD-VSGSFVEE  102 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC-SBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTT-SBCCEESS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC-CcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCC-CcEEEEcC
Confidence            58999996 669999999999999 46777654 332211                11    112222110 12333433


Q ss_pred             CCCCh-HHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEecccccccC
Q 019415           66 EIYDP-DTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCASP  136 (341)
Q Consensus        66 Dl~~~-~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~~  136 (341)
                      +..+. +.....+.++|+||.+...                ......+-++|++.+ + .||+.++.+ .+|
T Consensus       103 ~~~~~~~~~~~~~~~~dvVv~~~~~----------------~~~~~~l~~~c~~~~-i-p~i~~~~~G-~~G  155 (529)
T d1yova1         103 SPENLLDNDPSFFCRFTVVVATQLP----------------ESTSLRLADVLWNSQ-I-PLLICRTYG-LVG  155 (529)
T ss_dssp             CHHHHHHSCGGGGGGCSEEEEESCC----------------HHHHHHHHHHHHHHT-C-CEEEEEEET-TEE
T ss_pred             CchhhhhhHHHHhcCCCEEEECCCC----------------HHHHHHHHHHHHHcC-C-CEEEEeccC-CEE
Confidence            32211 1112346678999977321                222345677788887 4 588887766 443

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.37  E-value=0.01  Score=47.31  Aligned_cols=26  Identities=23%  Similarity=0.294  Sum_probs=23.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeE
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIV   33 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V   33 (341)
                      |||+|+| +|.+|...+.+|+++|++|
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence            7899999 8999999999999999754

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.26  E-value=0.048  Score=41.29  Aligned_cols=36  Identities=14%  Similarity=0.170  Sum_probs=30.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      ++++|||+| +|..+++++..|.+.| +|+++.| +.++
T Consensus        17 ~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR-~~~k   52 (177)
T d1nvta1          17 KDKNIVIYG-AGGAARAVAFELAKDN-NIIIANR-TVEK   52 (177)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECS-SHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehh-hhhH
Confidence            568999999 5678999999998777 8999999 7654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.24  E-value=0.083  Score=43.84  Aligned_cols=34  Identities=26%  Similarity=0.213  Sum_probs=30.6

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ++..||+|+| +|.-|-..+..|.++|++|+++-+
T Consensus         3 ~~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa   36 (449)
T d2dw4a2           3 KKTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEA   36 (449)
T ss_dssp             SCCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeC
Confidence            4567899999 899999999999999999999855

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=92.20  E-value=0.12  Score=35.90  Aligned_cols=35  Identities=14%  Similarity=0.122  Sum_probs=29.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC---CCeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK---GYIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~---g~~V~~~~r~~~   41 (341)
                      .+++++|+| .|++|-+++..|.+.   |.+|+++.| ..
T Consensus        17 ~p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~-~~   54 (117)
T d1feca2          17 APKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYR-GD   54 (117)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEES-SS
T ss_pred             cCCeEEEEC-CChHHHHHHHHhHhhcccccccceecc-cc
Confidence            357999999 899999999877654   789999988 54

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.16  E-value=0.061  Score=44.40  Aligned_cols=33  Identities=15%  Similarity=0.218  Sum_probs=29.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      ..|+|+| +|+-|..++..|++.|++|+++-+ +.
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk-~~   34 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEK-RN   34 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECS-SS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEEC-CC
Confidence            4799999 899999999999999999999976 44

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.97  E-value=0.076  Score=41.78  Aligned_cols=31  Identities=26%  Similarity=0.141  Sum_probs=28.8

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      |+|+| +|.-|...+..|+++|++|.++-+ +.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~-~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDK-QD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcC-CC
Confidence            79999 999999999999999999999988 54

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=91.83  E-value=0.058  Score=39.56  Aligned_cols=78  Identities=13%  Similarity=0.140  Sum_probs=40.2

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC-----CCC--CCceEEEecCCCChHHHHHHhc---
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL-----PGA--ETRLIFFEAEIYDPDTFENAIQ---   78 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~Dl~~~~~~~~~~~---   78 (341)
                      |-++| +|.+|+++++.|.+.++.+.+..| +.++...+......     ...  ..++.++...-   +.+.+++.   
T Consensus         2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R-~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d---~~i~~v~~~l~   76 (153)
T d2i76a2           2 LNFVG-TGTLTRFFLECLKDRYEIGYILSR-SIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPD---RYIKTVANHLN   76 (153)
T ss_dssp             CEEES-CCHHHHHHHHTTC----CCCEECS-SHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCT---TTHHHHHTTTC
T ss_pred             EEEEe-CcHHHHHHHHHHHhCCCEEEEEeC-ChhhhcchhhcccccccchhhhhccCcEEEEeccc---hhhhHHHhhhc
Confidence            34667 999999999988664444467788 76543333222111     010  12344444332   33444443   


Q ss_pred             -CCCEEEEeccCCc
Q 019415           79 -GCDFVFHVATPLQ   91 (341)
Q Consensus        79 -~~d~Vi~~a~~~~   91 (341)
                       +-.+|+|+++...
T Consensus        77 ~~~~ivi~~s~~~~   90 (153)
T d2i76a2          77 LGDAVLVHCSGFLS   90 (153)
T ss_dssp             CSSCCEEECCSSSC
T ss_pred             ccceeeeecccchh
Confidence             3467889887554

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.82  E-value=0.11  Score=36.16  Aligned_cols=33  Identities=18%  Similarity=0.136  Sum_probs=27.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC---CCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK---GYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~---g~~V~~~~r   38 (341)
                      .+++++|+| +|++|..++..|.+.   |.+|+++.|
T Consensus        19 ~p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~   54 (117)
T d1aoga2          19 PPRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYR   54 (117)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred             cCCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEec
Confidence            357999999 599999999777664   468999988

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.38  E-value=1.8  Score=32.12  Aligned_cols=104  Identities=13%  Similarity=0.149  Sum_probs=57.2

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CCCE
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GCDF   82 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~   82 (341)
                      ++||.|+| +|.+|+..++.|... +.+|+++..++.++   .+.+...........++       ++++++++  ++|+
T Consensus         1 kiki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~---~~~~~~~~~~~~~~~~~-------~~~~~ll~~~~iD~   69 (184)
T d1ydwa1           1 QIRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEK---AKAFATANNYPESTKIH-------GSYESLLEDPEIDA   69 (184)
T ss_dssp             CEEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHH---HHHHHHHTTCCTTCEEE-------SSHHHHHHCTTCCE
T ss_pred             CeEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccc---cccchhccccccceeec-------CcHHHhhhccccce
Confidence            37999999 689999999999886 56887664314432   22322211111222221       23555553  5788


Q ss_pred             EEEeccCCcccc--c----hh----HhHhhhhhhhHHHHHHHHHHhcC
Q 019415           83 VFHVATPLQHID--G----YL----YKNVVEACVGAAKKIASFCVKSG  120 (341)
Q Consensus        83 Vi~~a~~~~~~~--~----~~----~~~~~~~nv~~~~~l~~~~~~~~  120 (341)
                      |+=+........  .    ..    .+.=...|......|++.+++.+
T Consensus        70 v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~  117 (184)
T d1ydwa1          70 LYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANG  117 (184)
T ss_dssp             EEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTT
T ss_pred             eeecccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhC
Confidence            885543222110  0    00    00112236777888888888876

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.78  E-value=0.61  Score=36.61  Aligned_cols=33  Identities=24%  Similarity=0.219  Sum_probs=28.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHH-CCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLD-KGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r   38 (341)
                      ++++|.|-| .|.+|+++++.|.+ .|..|++++.
T Consensus        30 ~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          30 KKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence            468999998 99999999999975 5999888764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.77  E-value=0.17  Score=40.56  Aligned_cols=34  Identities=18%  Similarity=0.126  Sum_probs=30.0

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-YIVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~   41 (341)
                      +++|+|+| .|..|..++..|.+.| ++|+++-| +.
T Consensus         1 ~~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er-~~   35 (288)
T d3c96a1           1 PIDILIAG-AGIGGLSCALALHQAGIGKVTLLES-SS   35 (288)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEES-SS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeC-CC
Confidence            37899999 8999999999999999 48988877 54

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.70  E-value=0.11  Score=42.03  Aligned_cols=29  Identities=24%  Similarity=0.156  Sum_probs=27.7

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      |+|+| +|..|..++..|+++|++|+++.+
T Consensus         6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~   34 (281)
T d2gf3a1           6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDA   34 (281)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeC
Confidence            88999 899999999999999999999987

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.60  E-value=0.11  Score=42.49  Aligned_cols=32  Identities=22%  Similarity=0.509  Sum_probs=28.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNL   41 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~   41 (341)
                      +|+|+| +|.+|..++..|+++|+ +|+++.| +.
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~-~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQ-GP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECS-SC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeC-CC
Confidence            699999 89999999999999996 7999988 53

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=90.34  E-value=0.069  Score=40.35  Aligned_cols=31  Identities=26%  Similarity=0.337  Sum_probs=26.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      .+|+|+| +|++|-+++..|.+.|.+|.++.+
T Consensus         4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           4 APVVVLG-AGLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence            4699999 999999999999999977655443

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.33  E-value=0.66  Score=36.50  Aligned_cols=33  Identities=21%  Similarity=0.290  Sum_probs=28.4

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHH-CCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLD-KGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r   38 (341)
                      ++++|+|-| -|.+|+++++.|.+ .|..|++++.
T Consensus        31 ~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          31 KGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHhcCcceeeccc
Confidence            568999999 79999999999986 4889888765

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.28  E-value=0.15  Score=37.58  Aligned_cols=29  Identities=34%  Similarity=0.370  Sum_probs=25.8

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ||+|+| .|++|-+++..|.+ +.+|+++.|
T Consensus         2 rVvIIG-gG~~G~e~A~~l~~-~~~Vtvv~~   30 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLSQ-TYEVTVIDK   30 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTT-TSEEEEECS
T ss_pred             eEEEEC-CcHHHHHHHHHHHc-CCCEEEEec
Confidence            799999 89999999999864 789999877

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.26  E-value=0.1  Score=42.41  Aligned_cols=32  Identities=25%  Similarity=0.195  Sum_probs=29.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      +|+|+| .|..|..++..|.+.|++|+++.| +.
T Consensus         4 ~V~IvG-aGp~Gl~~A~~L~~~G~~v~vlE~-~~   35 (292)
T d1k0ia1           4 QVAIIG-AGPSGLLLGQLLHKAGIDNVILER-QT   35 (292)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHTCCEEEECS-SC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCCCCEEEEeC-CC
Confidence            699999 789999999999999999999988 54

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.02  E-value=1.1  Score=34.31  Aligned_cols=99  Identities=22%  Similarity=0.213  Sum_probs=63.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCC----------------
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIY----------------   68 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (341)
                      +.||.|+| -|.-|..++..|.+.|. .|..+.- +-..    +.|...+   ...++..+.-.                
T Consensus        15 ~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iai-nTD~----~~L~~~~---~~~ki~ig~~~t~g~Gag~~p~~g~~a   85 (209)
T d2vapa1          15 KAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAI-NTDA----QQLIRTK---ADKKILIGKKLTRGLGAGGNPKIGEEA   85 (209)
T ss_dssp             CCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEE-ESBH----HHHHTSC---CSEEEECCTTTTTTBCCTTCHHHHHHH
T ss_pred             CCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEE-eCCH----HHHhcCC---cchhcccccccccccccccchHHHHHH
Confidence            46899999 88899999999999874 3544333 3221    2233221   12333333221                


Q ss_pred             ---ChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEE
Q 019415           69 ---DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRL  125 (341)
Q Consensus        69 ---~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~  125 (341)
                         +.+.+.+.++++|.||-+||..+...           ..++--+++.+++.+ +..+
T Consensus        86 a~e~~~~I~~~l~~~d~vfi~AGlGGGTG-----------sgaapvia~~ake~g-~lvv  133 (209)
T d2vapa1          86 AKESAEEIKAAIQDSDMVFITCGLGGGTG-----------TGSAPVVAEISKKIG-ALTV  133 (209)
T ss_dssp             HHHTHHHHHHHHTTCSEEEEEEETTSSHH-----------HHHHHHHHHHHHHTT-CEEE
T ss_pred             HHHHHHHHHHhccCCCEEEEEEeCCCCcc-----------ccHHHHHHHHHHHcC-CcEE
Confidence               22477888889999999999988753           334556888899988 4433

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.00  E-value=0.19  Score=41.86  Aligned_cols=35  Identities=26%  Similarity=0.157  Sum_probs=30.2

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCC--CeEEEEecCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKG--YIVHTTLRPNL   41 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~   41 (341)
                      .+|||+|+| +|.-|-..+..|++.|  ++|+++-| +.
T Consensus         3 ~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk-~~   39 (335)
T d2gv8a1           3 TIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFER-RG   39 (335)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECS-SS
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEEC-CC
Confidence            357999999 8999999999998876  69999988 54

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=89.61  E-value=0.99  Score=33.03  Aligned_cols=99  Identities=16%  Similarity=0.113  Sum_probs=52.7

Q ss_pred             cEEEEecCcchHHHH-HHHHHHHCC-CeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHh-cCCCEE
Q 019415            7 FKVCVTGGEGFVGSW-LIKKLLDKG-YIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAI-QGCDFV   83 (341)
Q Consensus         7 ~~ilI~GatG~iG~~-l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~V   83 (341)
                      |||.|+| .|.+|+. .+..|.+.+ .++.+.++ +...   ...+....    ++.....|+   +   +++ .++|+|
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~-~~~~---~~~~~~~~----~~~~~~~~~---~---~ll~~~iD~V   66 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTR-NPKV---LGTLATRY----RVSATCTDY---R---DVLQYGVDAV   66 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECS-CHHH---HHHHHHHT----TCCCCCSST---T---GGGGGCCSEE
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEC-CHHH---HHHHHHhc----ccccccccH---H---Hhccccccee
Confidence            7999999 6788865 566666653 57666555 5433   22222211    111111222   2   223 367888


Q ss_pred             EEeccCCccccchhHhHh------------hhhhhhHHHHHHHHHHhcCCcC
Q 019415           84 FHVATPLQHIDGYLYKNV------------VEACVGAAKKIASFCVKSGTVK  123 (341)
Q Consensus        84 i~~a~~~~~~~~~~~~~~------------~~~nv~~~~~l~~~~~~~~~~~  123 (341)
                      +-+........  .....            +..|......|++++++.+ ..
T Consensus        67 ~I~tp~~~H~~--~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~-~~  115 (167)
T d1xeaa1          67 MIHAATDVHST--LAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHH-QP  115 (167)
T ss_dssp             EECSCGGGHHH--HHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTT-CC
T ss_pred             ccccccccccc--ccccccccccccccCCCCcCCHHHHHHHHHHHHHcC-CE
Confidence            75544322211  00011            1336778889999999887 44

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.60  E-value=0.22  Score=35.55  Aligned_cols=34  Identities=26%  Similarity=0.241  Sum_probs=28.1

Q ss_pred             CcEEEEecCcchHHHHHHHHHHH----CCCeEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLD----KGYIVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~   41 (341)
                      .++|+|+| .|++|-.++..|..    .|.+|+.+.+ +.
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~-~~   74 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFP-EK   74 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECS-SS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecc-cc
Confidence            46899998 79999999998863    5899999877 44

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=89.36  E-value=1.5  Score=32.26  Aligned_cols=83  Identities=18%  Similarity=0.209  Sum_probs=49.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCC----Cce------------EEEecCCCCh
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAE----TRL------------IFFEAEIYDP   70 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----~~~------------~~~~~Dl~~~   70 (341)
                      |||.|=| =|-||+.+.+.|.+++.+|.++.. - .+.+....+......+    ..+            .+....-.++
T Consensus         1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd-~-~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p   77 (168)
T d2g82a1           1 MKVGING-FGRIGRQVFRILHSRGVEVALIND-L-TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP   77 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC-S-SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECC-C-cchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh
Confidence            6888877 999999999999999999888766 3 2333333333221111    111            1111222344


Q ss_pred             HHHHHHhcCCCEEEEeccCCcc
Q 019415           71 DTFENAIQGCDFVFHVATPLQH   92 (341)
Q Consensus        71 ~~~~~~~~~~d~Vi~~a~~~~~   92 (341)
                      +++.=.-.++|+|+-|.|....
T Consensus        78 ~~i~W~~~gvdiViEcTG~f~~   99 (168)
T d2g82a1          78 KEIPWAEAGVGVVIESTGVFTD   99 (168)
T ss_dssp             GGCCTGGGTEEEEEECSSSCCB
T ss_pred             HHCcccccCCceeEeccccccc
Confidence            4333222378999999887654

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=89.20  E-value=1.4  Score=33.33  Aligned_cols=98  Identities=20%  Similarity=0.229  Sum_probs=63.0

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCC-C----------------
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI-Y----------------   68 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~----------------   68 (341)
                      +||.|+| -|--|..++..|.+.|. .|-.+.- +-..    +.+...+   ...++..+.- +                
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iai-nTD~----~~L~~~~---a~~ki~iG~~~t~G~G~g~~p~~g~~aa   71 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAV-NTDL----QVLEASN---ADVKIQIGENITRGLGAGGRPEIGEQAA   71 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEE-ESCH----HHHHTCC---CSEEEECCTTTTTTSCCTTCHHHHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEE-cCCH----HHHhcCC---cceEEecccccCCCcccccCchhhHhHH
Confidence            5799999 88899999999999863 2433322 2211    3333322   1233333321 1                


Q ss_pred             --ChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEE
Q 019415           69 --DPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRL  125 (341)
Q Consensus        69 --~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~  125 (341)
                        +.+.+.+.++++|.||-+|+..+...           ..++--+++.|++.+ +..+
T Consensus        72 ~e~~~~I~~~l~~~d~vfi~AGlGGgTG-----------tgaapviA~~ake~g-~lvv  118 (194)
T d1w5fa1          72 LESEEKIREVLQDTHMVFITAGFGGGTG-----------TGASPVIAKIAKEMG-ILTV  118 (194)
T ss_dssp             HHTHHHHHHHTTTCSEEEEEEETTSSHH-----------HHHHHHHHHHHHHTT-CEEE
T ss_pred             HHHHHHHHHHhcCCCeEEEEEecCCCcc-----------cchHHHHHHHHHHcC-CceE
Confidence              23577888889999999999988753           444567889999988 4433

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.93  E-value=0.2  Score=38.86  Aligned_cols=77  Identities=17%  Similarity=0.230  Sum_probs=53.0

Q ss_pred             CCCcEEEEecC-cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            4 KSNFKVCVTGG-EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         4 ~~~~~ilI~Ga-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +.+++||=+|+ +|..-.+|++.. ..| +|++++- ++.....+....   ...+++.++.+|..++......+..+|+
T Consensus        55 kpg~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDi-s~~~i~~a~~~a---~~~~ni~~i~~d~~~~~~~~~~~~~vd~  128 (209)
T d1nt2a_          55 RGDERVLYLGAASGTTVSHLADIV-DEG-IIYAVEY-SAKPFEKLLELV---RERNNIIPLLFDASKPWKYSGIVEKVDL  128 (209)
T ss_dssp             CSSCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECC-CHHHHHHHHHHH---HHCSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred             CCCCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeC-CHHHHHHHHHHh---hccCCceEEEeeccCccccccccceEEE
Confidence            34689997786 898888888665 445 8999866 543322222221   1224899999999998877766777788


Q ss_pred             EEEe
Q 019415           83 VFHV   86 (341)
Q Consensus        83 Vi~~   86 (341)
                      |+|.
T Consensus       129 v~~~  132 (209)
T d1nt2a_         129 IYQD  132 (209)
T ss_dssp             EEEC
T ss_pred             EEec
Confidence            8764

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=88.82  E-value=0.16  Score=43.52  Aligned_cols=32  Identities=22%  Similarity=0.102  Sum_probs=25.2

Q ss_pred             cEEEEec---------CcchHHHHHHHHHHHCCCeEEEEec
Q 019415            7 FKVCVTG---------GEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         7 ~~ilI~G---------atG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ||||+++         |-|-.-.+|++.|.++||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            7888844         4455557789999999999999874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=88.73  E-value=0.4  Score=35.95  Aligned_cols=77  Identities=13%  Similarity=0.092  Sum_probs=44.1

Q ss_pred             CCcEEEEecC-cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCC-----------CCCceEEEecCCCChHH
Q 019415            5 SNFKVCVTGG-EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPG-----------AETRLIFFEAEIYDPDT   72 (341)
Q Consensus         5 ~~~~ilI~Ga-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~Dl~~~~~   72 (341)
                      .+.+||.+|+ +|.    .+..|+++|++|++++. +..-............           ....+.++.+|..+...
T Consensus        20 ~~~rvLd~GCG~G~----~a~~la~~G~~V~gvD~-S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~   94 (201)
T d1pjza_          20 PGARVLVPLCGKSQ----DMSWLSGQGYHVVGAEL-SEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA   94 (201)
T ss_dssp             TTCEEEETTTCCSH----HHHHHHHHCCEEEEEEE-CHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred             CCCEEEEecCcCCH----HHHHHHHcCCceEeecc-cHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence            4679999996 554    44466677999999987 5433222222211100           02356788888877432


Q ss_pred             HHHHhcCCCEEEEecc
Q 019415           73 FENAIQGCDFVFHVAT   88 (341)
Q Consensus        73 ~~~~~~~~d~Vi~~a~   88 (341)
                      ..  ....|.|+-...
T Consensus        95 ~~--~~~~D~i~~~~~  108 (201)
T d1pjza_          95 RD--IGHCAAFYDRAA  108 (201)
T ss_dssp             HH--HHSEEEEEEESC
T ss_pred             cc--ccceeEEEEEee
Confidence            22  124576655433

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=88.35  E-value=0.36  Score=31.57  Aligned_cols=31  Identities=23%  Similarity=0.208  Sum_probs=26.3

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      |||||+| +|-=-.+|+..|.+..++|+++--
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pG   31 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPG   31 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecC
Confidence            7999999 666678999999999999998644

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=88.04  E-value=0.25  Score=38.89  Aligned_cols=32  Identities=25%  Similarity=0.262  Sum_probs=28.5

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNL   41 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~   41 (341)
                      +|+|+| +|.-|-..+..|.++|+ +|+++-+ +.
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~-~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEA-TD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECS-SS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEEC-CC
Confidence            699999 89999999999999996 7999877 43

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.03  E-value=0.83  Score=35.66  Aligned_cols=77  Identities=18%  Similarity=0.199  Sum_probs=52.5

Q ss_pred             CCCcEEEEecC-cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            4 KSNFKVCVTGG-EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         4 ~~~~~ilI~Ga-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +.+++||=+|+ +|+...+|++. ... ..|++++- ++.   ....+.......+.+..+.+|..++..+.......|+
T Consensus        73 kpG~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDi-S~~---~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~  146 (230)
T d1g8sa_          73 KRDSKILYLGASAGTTPSHVADI-ADK-GIVYAIEY-APR---IMRELLDACAERENIIPILGDANKPQEYANIVEKVDV  146 (230)
T ss_dssp             CTTCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEES-CHH---HHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred             CCCCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeC-cHH---HHHHHHHHHhhhcccceEEEeeccCcccccccceeEE
Confidence            35689998887 99999999985 333 49999877 543   3333333333346788899999998776655445555


Q ss_pred             EEEe
Q 019415           83 VFHV   86 (341)
Q Consensus        83 Vi~~   86 (341)
                      +++.
T Consensus       147 i~~~  150 (230)
T d1g8sa_         147 IYED  150 (230)
T ss_dssp             EEEC
T ss_pred             eecc
Confidence            6554

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.98  E-value=0.33  Score=38.18  Aligned_cols=32  Identities=22%  Similarity=0.110  Sum_probs=29.1

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      |+|+| .|..|...+..|.+.|++|.++.+ +..
T Consensus         5 ViIIG-aG~aGl~aA~~la~~G~~V~liEk-~~~   36 (251)
T d2i0za1           5 VIVIG-GGPSGLMAAIGAAEEGANVLLLDK-GNK   36 (251)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEeC-CCC
Confidence            89999 899999999999999999999988 543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.79  E-value=0.21  Score=36.58  Aligned_cols=32  Identities=25%  Similarity=0.188  Sum_probs=26.7

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      ||.++| .|.+|..+++.|++.|+.|. ..| ..+
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g~~~~-~~~-~~~   33 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRFPTLV-WNR-TFE   33 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTSCEEE-ECS-STH
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCCCEEE-EeC-CHH
Confidence            689999 79999999999999998764 567 443

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.68  E-value=0.55  Score=36.71  Aligned_cols=79  Identities=11%  Similarity=0.078  Sum_probs=55.3

Q ss_pred             CCCcEEEEecC-cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            4 KSNFKVCVTGG-EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         4 ~~~~~ilI~Ga-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      +.+++||=+|+ +|..-.+|++..-.. -.|++++. ++..   .+.+.........+..+..|..+++.+......+|+
T Consensus        72 ~pG~~VLDlGaGsG~~t~~la~~VG~~-G~V~aVD~-s~~~---l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~  146 (227)
T d1g8aa_          72 KPGKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEF-SPRV---LRELVPIVEERRNIVPILGDATKPEEYRALVPKVDV  146 (227)
T ss_dssp             CTTCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEES-CHHH---HHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred             CCCCEEEEeccCCCHHHHHHHHHhCCC-CEEEEEeC-cHHH---HHHHHHHHHhcCCceEEEEECCCcccccccccceEE
Confidence            35689997776 999999999855444 58999877 5433   333333222335788999999998877766677888


Q ss_pred             EEEec
Q 019415           83 VFHVA   87 (341)
Q Consensus        83 Vi~~a   87 (341)
                      |++-.
T Consensus       147 i~~d~  151 (227)
T d1g8aa_         147 IFEDV  151 (227)
T ss_dssp             EEECC
T ss_pred             EEEEc
Confidence            87653

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.65  E-value=0.22  Score=33.84  Aligned_cols=34  Identities=15%  Similarity=-0.066  Sum_probs=29.0

Q ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            4 KSNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         4 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ..+|+|+|+| +|.-|.-++..|++.+.+|+...|
T Consensus        30 f~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~   63 (107)
T d2gv8a2          30 FVGESVLVVG-GASSANDLVRHLTPVAKHPIYQSL   63 (107)
T ss_dssp             GTTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEEC
T ss_pred             cCCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEe
Confidence            3578999999 889999999999998877766666

>d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: 2-methylacyl-CoA racemase Mcr
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.59  E-value=1.3  Score=36.95  Aligned_cols=106  Identities=21%  Similarity=0.102  Sum_probs=68.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChH---HHHHHhcCCC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPD---TFENAIQGCD   81 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~---~~~~~~~~~d   81 (341)
                      .+.|||=++ ...-|-...+.|++.|.+|+-+-+|...+.....      ....+-+-+..|+.+++   .+.++++++|
T Consensus         5 ~girVld~~-~~~agp~~~~~lad~GA~VikvE~p~~~~~~~~~------~~nr~K~si~lDl~~~~g~~~~~~Lv~~aD   77 (359)
T d1x74a1           5 SGLRVVELA-GIGPGPHAAMILGDLGADVVRIDRPSSVDGISRD------AMLRNRRIVTADLKSDQGLELALKLIAKAD   77 (359)
T ss_dssp             TTCEEEEEC-CSTHHHHHHHHHHHTTCEEEEEECC-----CCCC------GGGCSCEEEECCTTSHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEcC-CchHHHHHHHHHHHhCCEEEEECCCCCCCchhhh------hhhCCCeEEEEeCcCHHHHHHHHHHHhhCC
Confidence            345777555 5677888889999999999998764432211111      12245677899998874   6777888999


Q ss_pred             EEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccccccc
Q 019415           82 FVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCAS  135 (341)
Q Consensus        82 ~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~  135 (341)
                      +||+.-.+..... .-+               .+.+++.+  +++||+|-++ ++
T Consensus        78 v~i~n~~pg~~~~lgl~---------------~~~l~~~n--P~lI~~sisg-fG  114 (359)
T d1x74a1          78 VLIEGYRPGVTERLGLG---------------PEECAKVN--DRLIYARMTG-WG  114 (359)
T ss_dssp             EEEECSCTTHHHHHTCS---------------HHHHHHHC--TTCEEEEEES-SC
T ss_pred             EEEecCCCCchhhcCCC---------------HHHHHhhc--CCceEEEEeC-CC
Confidence            9999865544321 000               23345555  7899999876 55

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=87.56  E-value=0.26  Score=41.40  Aligned_cols=29  Identities=17%  Similarity=0.137  Sum_probs=27.6

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      |+|+| +|+-|..++..|++.|++|.++-|
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   33 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEM   33 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEES
T ss_pred             EEEeC-cCHHHHHHHHHHHHCcCeEEEEec
Confidence            78888 999999999999999999999987

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=87.22  E-value=2.9  Score=30.67  Aligned_cols=83  Identities=12%  Similarity=0.216  Sum_probs=48.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCC----CCceE------------EEecCCCChH
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGA----ETRLI------------FFEAEIYDPD   71 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~------------~~~~Dl~~~~   71 (341)
                      ||.|-| =|-||+.+.+.+++.+.+|..+..|.. +.+....+-.....    ...+.            +....-.+++
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~-~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~   79 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFI-ALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE   79 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTS-CHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCc-CHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH
Confidence            678877 999999999999999988888765233 32333333221111    11111            1111223444


Q ss_pred             HHHHHhcCCCEEEEeccCCcc
Q 019415           72 TFENAIQGCDFVFHVATPLQH   92 (341)
Q Consensus        72 ~~~~~~~~~d~Vi~~a~~~~~   92 (341)
                      ++.=.-.++|+||-|.|....
T Consensus        80 ~i~W~~~gvD~ViEcTG~f~~  100 (169)
T d1dssg1          80 NIPWSKAGAEYIVESTGVFTT  100 (169)
T ss_dssp             GCCHHHHTCCEEEECSSSCCS
T ss_pred             HCCccccCCCEEEecCceEcC
Confidence            332112279999999987764

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.56  E-value=0.38  Score=39.71  Aligned_cols=31  Identities=32%  Similarity=0.256  Sum_probs=28.2

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      |+|+| +|.-|-..+..|.++|++|+++-+ +.
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~-~~   32 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEA-RD   32 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTTCCEEEEES-SS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCEEEEec-CC
Confidence            78899 899999999999999999999976 44

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=86.47  E-value=0.35  Score=38.59  Aligned_cols=33  Identities=27%  Similarity=0.119  Sum_probs=30.0

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      ++++|.|-| .|.+|+++++.|.+.|.+|++++.
T Consensus        35 ~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          35 VGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            568999999 899999999999999999988765

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.44  E-value=0.92  Score=34.61  Aligned_cols=85  Identities=9%  Similarity=0.111  Sum_probs=52.0

Q ss_pred             CcEEEEecCcchHHHH-HHHHH---HHC-----CCeEEEEecCCCCch-hhhhHhhh-CCC----------CCCceEEEe
Q 019415            6 NFKVCVTGGEGFVGSW-LIKKL---LDK-----GYIVHTTLRPNLEDK-SKVDLLKS-LPG----------AETRLIFFE   64 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~-l~~~L---~~~-----g~~V~~~~r~~~~~~-~~~~~~~~-~~~----------~~~~~~~~~   64 (341)
                      ...++|+||||=+... |...|   ...     +..|++++| +.-+. ...+.+.. +..          ....+.++.
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR-~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYAR-SRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBS-SCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEEC-CCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            3468999999998764 33333   333     367999999 55332 22222111 111          125789999


Q ss_pred             cCCCChHHHHHHhc---------CCCEEEEeccCCc
Q 019415           65 AEIYDPDTFENAIQ---------GCDFVFHVATPLQ   91 (341)
Q Consensus        65 ~Dl~~~~~~~~~~~---------~~d~Vi~~a~~~~   91 (341)
                      +|+++++++.++-+         ....|+++|-+..
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvpP~  134 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPT  134 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEECSCHH
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEecCHH
Confidence            99999987765522         2457888876533

>d2vjma1 c.123.1.1 (A:2-428) Formyl-CoA transferase {Oxalobacter formigenes [TaxId: 847]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Formyl-CoA transferase
species: Oxalobacter formigenes [TaxId: 847]

Probab=85.60  E-value=2.9  Score=35.51  Aligned_cols=111  Identities=14%  Similarity=0.059  Sum_probs=70.3

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhC--------CCCCCceEEEecCCCChH---HH
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSL--------PGAETRLIFFEAEIYDPD---TF   73 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~~~~~Dl~~~~---~~   73 (341)
                      .+.|||=++ ...-|-...+.|++.|.+|+-+-+|...+..+. .....        .....+=+-+..||.+++   .+
T Consensus         5 ~GirVld~~-~~~agp~~~~~LadlGAeVIkvE~p~~gd~~R~-~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g~~~~   82 (427)
T d2vjma1           5 DGINVLDFT-HVQAGPACTQMMGFLGANVIKIERRGSGDMTRG-WLQDKPNVDSLYFTMFNCNKRSIELDMKTPEGKELL   82 (427)
T ss_dssp             TTCEEEECC-CTTHHHHHHHHHHHTTCEEEEEECTTTCSGGGG-SSCSSTTSCCHHHHTTCSSCEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEcC-ChhHHHHHHHHHHHhCCeEEEECCCCCCCcccc-cCCCCCCCccHHHHHhCCCCeEEEEeCcCHHHHHHH
Confidence            356777655 556688888899999999999876422221110 00000        011246678999999875   67


Q ss_pred             HHHhcCCCEEEEeccCCcccc-chhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEEeccccccc
Q 019415           74 ENAIQGCDFVFHVATPLQHID-GYLYKNVVEACVGAAKKIASFCVKSGTVKRLIYTASVLCAS  135 (341)
Q Consensus        74 ~~~~~~~d~Vi~~a~~~~~~~-~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~~Ss~~~~~  135 (341)
                      .++++.+|+||+.-.+..... .-+               .+.+++.+  +++||+|.++ ++
T Consensus        83 ~~Lv~~aDv~i~n~~pg~~~rlGL~---------------~~~l~~~N--P~LI~~sisg-fG  127 (427)
T d2vjma1          83 EQMIKKADVMVENFGPGALDRMGFT---------------WEYIQELN--PRVILASVKG-YA  127 (427)
T ss_dssp             HHHHHHCSEEEECCSTTHHHHTTCC---------------HHHHHHHC--TTCEEEEEES-SC
T ss_pred             HHHHHhCCeeeECCCcchHHHcCCC---------------chhhhhhC--Cccceeeeec-cc
Confidence            788889999999865444321 101               23345555  7899999886 55

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=83.87  E-value=0.61  Score=38.07  Aligned_cols=34  Identities=29%  Similarity=0.443  Sum_probs=30.2

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLE   42 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~   42 (341)
                      -.|+|+| .|+.|-..+..|.+.|.+|+++.+ +..
T Consensus         8 ~dV~IIG-AG~sGl~~a~~L~~~G~~v~i~Ek-~~~   41 (298)
T d1w4xa1           8 VDVLVVG-AGFSGLYALYRLRELGRSVHVIET-AGD   41 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SSS
T ss_pred             CCEEEEC-ccHHHHHHHHHHHhCCCCEEEEEc-CCC
Confidence            4699999 899999999999999999999987 543

>d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=83.13  E-value=7.3  Score=28.97  Aligned_cols=32  Identities=25%  Similarity=0.398  Sum_probs=25.6

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-----CeEEEEec
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKG-----YIVHTTLR   38 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g-----~~V~~~~r   38 (341)
                      .|||.|-| =|-||+.+.+.+.+++     .+|..+..
T Consensus         2 ~ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind   38 (190)
T d1k3ta1           2 PIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVD   38 (190)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEE
T ss_pred             CeEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEec
Confidence            47999988 9999999999998874     25555554

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=82.74  E-value=0.55  Score=39.36  Aligned_cols=29  Identities=21%  Similarity=0.265  Sum_probs=27.2

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      |+|+| +|+-|..++..|++.|++|.++-|
T Consensus        10 vIVVG-sG~aG~v~A~rLaeaG~~VlvLEa   38 (370)
T d3coxa1          10 ALVIG-SGYGGAVAALRLTQAGIPTQIVEM   38 (370)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCeEEEEeC
Confidence            78888 999999999999999999999976

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.74  E-value=6.6  Score=29.44  Aligned_cols=99  Identities=21%  Similarity=0.192  Sum_probs=62.3

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCC-------------------
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI-------------------   67 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------------------   67 (341)
                      +|-|+| -|--|.+++..|.+.+. .|..+.- +-..    +.+....   ...++..+.-                   
T Consensus         3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iai-nTD~----~~L~~~~---~~~ki~iG~~~t~G~Gagg~p~~g~~aa~   73 (198)
T d1rq2a1           3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAI-NTDA----QALLMSD---ADVKLDVGRDSTRGLGAGADPEVGRKAAE   73 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEE-ESCH----HHHHHCC---CSEEEECCTTTC-----CCCHHHHHHHHH
T ss_pred             eEEEEE-eCchHHHHHHHHHHcCCCCceEEEE-cchH----HHHhcCC---cchhhccccccccCCCcCcChhhhHhhHH
Confidence            456777 56679999999999874 3443333 3221    2222221   1333433321                   


Q ss_pred             CChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCEEEE
Q 019415           68 YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKRLIY  127 (341)
Q Consensus        68 ~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~~I~  127 (341)
                      .+.+.+.+.++++|.||=+||..+...           ..++--+++.|++.+ +-.+-+
T Consensus        74 e~~~~I~~~l~~~d~vfi~AGlGGgTG-----------tGaaPviA~iake~g-~l~v~i  121 (198)
T d1rq2a1          74 DAKDEIEELLRGADMVFVTAGEGGGTG-----------TGGAPVVASIARKLG-ALTVGV  121 (198)
T ss_dssp             HTHHHHHHHHTTCSEEEEEEETTSSHH-----------HHHHHHHHHHHHHHT-CEEEEE
T ss_pred             HHHHHHHHHhcCCCEEEEEEecCCCCC-----------cchHHHHHHHHHHcC-CcEEEE
Confidence            234678888899999999999988753           344556889999988 444433

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=82.72  E-value=1.1  Score=34.70  Aligned_cols=104  Identities=11%  Similarity=0.192  Sum_probs=55.1

Q ss_pred             CCcEEEEecCcchHHH-HHHHHHHHC-CCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhc--CC
Q 019415            5 SNFKVCVTGGEGFVGS-WLIKKLLDK-GYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQ--GC   80 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~-~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~   80 (341)
                      ++-||.|+| .|.+|+ +++..|... +.+|+++..++..+   .+.+....+.. ......  .+|   ++++++  ++
T Consensus        32 ~~iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~---a~~~~~~~~i~-~~~~~~--~~d---~~ell~~~~i  101 (221)
T d1h6da1          32 RRFGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEK---AKIVAAEYGVD-PRKIYD--YSN---FDKIAKDPKI  101 (221)
T ss_dssp             CCEEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHH---HHHHHHHTTCC-GGGEEC--SSS---GGGGGGCTTC
T ss_pred             CCEEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHH---HHHHHHhhccc-cccccc--cCc---hhhhcccccc
Confidence            345899999 689996 676666665 57777654414433   22222211111 111111  122   344554  57


Q ss_pred             CEEEEeccCCccccchhHhHh------------hhhhhhHHHHHHHHHHhcC
Q 019415           81 DFVFHVATPLQHIDGYLYKNV------------VEACVGAAKKIASFCVKSG  120 (341)
Q Consensus        81 d~Vi~~a~~~~~~~~~~~~~~------------~~~nv~~~~~l~~~~~~~~  120 (341)
                      |+|+=+........  .-...            +..|+.....|++++++.+
T Consensus       102 D~V~I~tp~~~H~~--~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~  151 (221)
T d1h6da1         102 DAVYIILPNSLHAE--FAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAAN  151 (221)
T ss_dssp             CEEEECSCGGGHHH--HHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHT
T ss_pred             eeeeeccchhhhhh--HHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcC
Confidence            88875544333211  00011            2347788889999999887

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=82.30  E-value=0.33  Score=36.59  Aligned_cols=37  Identities=11%  Similarity=0.017  Sum_probs=25.5

Q ss_pred             CCCCCCcEEEEecCcchHH----HHHHHHHHHCCCeEEEEec
Q 019415            1 MDHKSNFKVCVTGGEGFVG----SWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         1 M~~~~~~~ilI~GatG~iG----~~l~~~L~~~g~~V~~~~r   38 (341)
                      |+..++||||| |.||-|+    ..+++.|.+.|++|.++..
T Consensus         1 ms~l~~KkIll-gvTGsiaa~k~~~l~~~L~~~g~eV~vv~T   41 (183)
T d1p3y1_           1 ISILKDKKLLI-GICGSISSVGISSYLLYFKSFFKEIRVVMT   41 (183)
T ss_dssp             CTTGGGCEEEE-EECSCGGGGGTHHHHHHHTTTSSEEEEEEC
T ss_pred             CCCcCCCEEEE-EEeCHHHHHHHHHHHHHHHHCCCeEEEEEE
Confidence            66656678763 5555443    4777888888999988654

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=82.23  E-value=0.63  Score=38.77  Aligned_cols=29  Identities=28%  Similarity=0.423  Sum_probs=27.4

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEec
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r   38 (341)
                      |+|+| +|.-|..++..|++.|++|.++-+
T Consensus         7 viIVG-sG~aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVG-SGPIGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEEC-cCHHHHHHHHHHhhCCCeEEEEec
Confidence            88999 999999999999999999999976

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.18  E-value=1.1  Score=32.53  Aligned_cols=34  Identities=24%  Similarity=0.051  Sum_probs=28.8

Q ss_pred             CcEEEEecCcchHHHHHHHHHHHCCC-eEEEEecCCC
Q 019415            6 NFKVCVTGGEGFVGSWLIKKLLDKGY-IVHTTLRPNL   41 (341)
Q Consensus         6 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~   41 (341)
                      +++|+|+| .|.+|...+..|.+.|. .|+++.| +.
T Consensus        45 ~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~r-r~   79 (153)
T d1gtea3          45 RGAVIVLG-AGDTAFDCATSALRCGARRVFLVFR-KG   79 (153)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECS-SC
T ss_pred             CCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEe-CC
Confidence            46899998 89999999999999985 5888877 54

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.95  E-value=0.51  Score=37.30  Aligned_cols=35  Identities=17%  Similarity=0.119  Sum_probs=30.7

Q ss_pred             cEEEEecCcchHHHHHHHHHHHCCCeEEEEecCCCCc
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNLED   43 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~   43 (341)
                      .-|+|+| .|-.|...+..|.++|.+|.++.+ +...
T Consensus         5 ~DViIIG-aG~aGl~aA~~la~~G~~V~vlEk-~~~~   39 (253)
T d2gqfa1           5 SENIIIG-AGAAGLFCAAQLAKLGKSVTVFDN-GKKI   39 (253)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SSSS
T ss_pred             CcEEEEC-cCHHHHHHHHHHHHCCCcEEEEec-CCCC
Confidence            3599999 899999999999999999999988 6543

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.12  E-value=0.84  Score=35.24  Aligned_cols=33  Identities=27%  Similarity=0.434  Sum_probs=28.9

Q ss_pred             cEEEEecCcchHHHHHHHHHHHC--CCeEEEEecCCC
Q 019415            7 FKVCVTGGEGFVGSWLIKKLLDK--GYIVHTTLRPNL   41 (341)
Q Consensus         7 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~   41 (341)
                      .||.|+| +|--|...+..|.+.  |++|+++.+ ..
T Consensus         2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~-~~   36 (230)
T d1cjca2           2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEK-QL   36 (230)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECS-SS
T ss_pred             CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeC-CC
Confidence            4899999 899999999999875  789999977 54

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=80.98  E-value=1  Score=32.49  Aligned_cols=68  Identities=15%  Similarity=0.078  Sum_probs=45.3

Q ss_pred             CCcEEEEecC--cchHHHHHHHHHHHCCCeEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCCCChHHHHHHhcCCCE
Q 019415            5 SNFKVCVTGG--EGFVGSWLIKKLLDKGYIVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEIYDPDTFENAIQGCDF   82 (341)
Q Consensus         5 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~   82 (341)
                      .+++|+++|=  .+-+..+++..|...|.+|++.+- ..-        .  +. ...+.+       ..++.+++++.|+
T Consensus         2 ~gl~i~~vGD~~~srv~~Sl~~~~~~~g~~~~i~~P-~~~--------~--~~-~~~~~~-------~~~~~ea~~~aDv   62 (151)
T d2at2a2           2 KGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGP-SEW--------Q--DE-ENTFGT-------YVSMDEAVESSDV   62 (151)
T ss_pred             CCCEEEEEcCCCCCHHHHHHHHHHHHcCCcccccCC-chh--------h--cc-ccceeE-------EEechhccccCce
Confidence            5789999998  677999999999999999877533 110        0  00 112222       1235568889999


Q ss_pred             EEEeccCCc
Q 019415           83 VFHVATPLQ   91 (341)
Q Consensus        83 Vi~~a~~~~   91 (341)
                      |+-......
T Consensus        63 iy~~r~q~e   71 (151)
T d2at2a2          63 VMLLRIQNE   71 (151)
T ss_pred             eeeeEEEEc
Confidence            987765433

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=80.92  E-value=0.79  Score=37.60  Aligned_cols=32  Identities=25%  Similarity=0.361  Sum_probs=22.3

Q ss_pred             cEEEEecC-cc-hH--HHHHHHHHHHCCCeEEEEec
Q 019415            7 FKVCVTGG-EG-FV--GSWLIKKLLDKGYIVHTTLR   38 (341)
Q Consensus         7 ~~ilI~Ga-tG-~i--G~~l~~~L~~~g~~V~~~~r   38 (341)
                      |||||++| || -+  +.+|+++|.++||+|+.++.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            57777664 43 22  23488999999999987755

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.92  E-value=4.3  Score=29.49  Aligned_cols=24  Identities=38%  Similarity=0.530  Sum_probs=19.9

Q ss_pred             CCcEEEEecCcchHHHHHHHHHHHC
Q 019415            5 SNFKVCVTGGEGFVGSWLIKKLLDK   29 (341)
Q Consensus         5 ~~~~ilI~GatG~iG~~l~~~L~~~   29 (341)
                      .+++|.|+| .|.+|+..++.|.+.
T Consensus         6 ~k~kv~iIG-~G~~g~~h~~~l~~~   29 (172)
T d1lc0a1           6 GKFGVVVVG-VGRAGSVRLRDLKDP   29 (172)
T ss_dssp             CSEEEEEEC-CSHHHHHHHHHHTSH
T ss_pred             CCcEEEEEc-CCHHHHHHHHHHHhC
Confidence            467999999 699999988887664

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=80.75  E-value=0.81  Score=37.12  Aligned_cols=31  Identities=26%  Similarity=0.153  Sum_probs=28.6

Q ss_pred             EEEecCcchHHHHHHHHHHHCCCeEEEEecCCC
Q 019415            9 VCVTGGEGFVGSWLIKKLLDKGYIVHTTLRPNL   41 (341)
Q Consensus         9 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~   41 (341)
                      |+|+| +|..|...+..|+++|.+|+++.+ ..
T Consensus        19 VlVIG-~G~aGl~aA~~la~~G~~V~lvEK-~~   49 (308)
T d1y0pa2          19 VVVVG-SGGAGFSAAISATDSGAKVILIEK-EP   49 (308)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECS-SS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCcEEEEec-CC
Confidence            89999 899999999999999999999877 54

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.61  E-value=6.3  Score=29.55  Aligned_cols=94  Identities=19%  Similarity=0.215  Sum_probs=60.1

Q ss_pred             EEEEecCcchHHHHHHHHHHHCCC---eEEEEecCCCCchhhhhHhhhCCCCCCceEEEecCC-----------------
Q 019415            8 KVCVTGGEGFVGSWLIKKLLDKGY---IVHTTLRPNLEDKSKVDLLKSLPGAETRLIFFEAEI-----------------   67 (341)
Q Consensus         8 ~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----------------   67 (341)
                      +|.|+| -|--|.+++..|.+.+.   +..++.- +..      .|...+   ...++..++-                 
T Consensus         3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainT-D~~------~L~~~~---~~~ki~iG~~~~~g~G~gg~p~~g~~a   71 (198)
T d1ofua1           3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANT-DAQ------ALKNIA---ARTVLQLGPGVTKGLGAGANPEVGRQA   71 (198)
T ss_dssp             CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEES-BTG------GGSSCS---CSEEEECCHHHHTTBCCCSCHHHHHHH
T ss_pred             eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeC-cHH------HHhcCC---ccceeccccccccCCCCCCChHHHHHH
Confidence            577888 78899999999999873   4444433 221      121111   1222222211                 


Q ss_pred             --CChHHHHHHhcCCCEEEEeccCCccccchhHhHhhhhhhhHHHHHHHHHHhcCCcCE
Q 019415           68 --YDPDTFENAIQGCDFVFHVATPLQHIDGYLYKNVVEACVGAAKKIASFCVKSGTVKR  124 (341)
Q Consensus        68 --~~~~~~~~~~~~~d~Vi~~a~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~  124 (341)
                        .+.+.+.+.++++|.||=+||..+...           ..++--+++.|++.+ +..
T Consensus        72 a~e~~~~I~~~l~~~d~vfi~AGlGGGTG-----------tgaapviA~~ake~g-~lv  118 (198)
T d1ofua1          72 ALEDRERISEVLEGADMVFITTGMGGGTG-----------TGAAPIIAEVAKEMG-ILT  118 (198)
T ss_dssp             HHHTHHHHHHHHTTCSEEEEEEETTSSHH-----------HHHHHHHHHHHHHTT-CEE
T ss_pred             HHHHHHHHHHHhCCCCeEEEEecCCCCcc-----------ccHHHHHHHHHHHcC-CCE
Confidence              134568888899999999999988753           344556889999988 433